Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-18 11:38:45 (992): Detected: vboxwrapper 26206
2025-04-18 11:38:45 (992): Detected: BOINC client v8.0.2
2025-04-18 11:38:46 (992): Detected: VirtualBox VboxManage Interface (Version: 7.1.8)
2025-04-18 11:38:47 (992): Successfully copied 'init_data.xml' to the shared directory.
2025-04-18 11:38:47 (992): Create VM. (boinc_4c7c46f6ea6cc614, slot#0)
2025-04-18 11:38:48 (992): Setting Memory Size for VM. (4400MB)
2025-04-18 11:38:48 (992): Setting CPU Count for VM. (4)
2025-04-18 11:38:48 (992): Setting Chipset Options for VM.
2025-04-18 11:38:49 (992): Setting Graphics Controller Options for VM.
2025-04-18 11:38:49 (992): Setting Boot Options for VM.
2025-04-18 11:38:49 (992): Setting Network Configuration for NAT.
2025-04-18 11:38:50 (992): Enabling VM Network Access.
2025-04-18 11:38:50 (992): Disabling USB Support for VM.
2025-04-18 11:38:50 (992): Disabling COM Port Support for VM.
2025-04-18 11:38:50 (992): Disabling LPT Port Support for VM.
2025-04-18 11:38:51 (992): Disabling Audio Support for VM.
2025-04-18 11:38:51 (992): Disabling Clipboard Support for VM.
2025-04-18 11:38:51 (992): Disabling Drag and Drop Support for VM.
2025-04-18 11:38:51 (992): Adding storage controller(s) to VM.
2025-04-18 11:38:52 (992): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-18 11:38:53 (992): Adding VirtualBox Guest Additions to VM.
2025-04-18 11:38:53 (992): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-18 11:38:53 (992): forwarding host port 59545 to guest port 80
2025-04-18 11:38:54 (992): Enabling remote desktop for VM.
2025-04-18 11:38:54 (992): Required extension pack not installed, remote desktop not enabled.
2025-04-18 11:38:54 (992): Enabling shared directory for VM.
2025-04-18 11:38:55 (992): Starting VM using VBoxManage interface. (boinc_4c7c46f6ea6cc614, slot#0)
2025-04-18 11:39:01 (992): Successfully started VM. (PID = '8980')
2025-04-18 11:39:01 (992): Reporting VM Process ID to BOINC.
2025-04-18 11:39:01 (992): Guest Log: BIOS: VirtualBox 7.1.8
2025-04-18 11:39:01 (992): Guest Log: CPUID EDX: 0x178bfbff
2025-04-18 11:39:01 (992): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-18 11:39:01 (992): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-18 11:39:01 (992): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-18 11:39:01 (992): Detected: Web Application Enabled (http://localhost:59545)
2025-04-18 11:39:01 (992): Preference change detected
2025-04-18 11:39:01 (992): Setting CPU throttle for VM. (100%)
2025-04-18 11:39:02 (992): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-18 11:39:03 (992): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-18 11:39:03 (992): Guest Log: BIOS: Booting from Hard Disk...
2025-04-18 11:39:06 (992): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-18 11:39:06 (992): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-18 11:39:06 (992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-18 11:39:13 (992): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-18 11:39:13 (992): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-18 11:39:20 (992): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-18 11:39:20 (992): Guest Log: 00:00:00.000195 main     Log opened 2025-04-18T11:39:18.913806000Z
2025-04-18 11:39:20 (992): Guest Log: 00:00:00.000371 main     OS Product: Linux
2025-04-18 11:39:20 (992): Guest Log: 00:00:00.000423 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-18 11:39:20 (992): Guest Log: 00:00:00.000500 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-18 11:39:20 (992): Guest Log: 00:00:00.000544 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-18 11:39:20 (992): Guest Log: 00:00:00.000545 main     Process ID: 1308
2025-04-18 11:39:20 (992): Guest Log: 00:00:00.000546 main     Package type: LINUX_64BITS_GENERIC
2025-04-18 11:39:20 (992): Guest Log: 00:00:00.002011 main     5.2.32 r132073 started. Verbose level = 0
2025-04-18 11:39:20 (992): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-18 11:39:20 (992): Guest Log: [INFO] Mounting shared directory
2025-04-18 11:39:21 (992): Guest Log: [INFO] Checking for init_data.xml
2025-04-18 11:39:24 (992): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-18 11:39:24 (992): Guest Log: [INFO] Detected branch: prod
2025-04-18 11:39:25 (992): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-18 11:39:25 (992): Guest Log: Copying input files
2025-04-18 11:39:26 (992): Guest Log: Copied input files into RunAtlas.
2025-04-18 11:39:26 (992): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-18 11:39:26 (992): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-18 11:39:26 (992): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-18 11:39:26 (992): Guest Log: Further information can be found at the LHC@home message board.
2025-04-18 11:39:30 (992): Guest Log: 00:00:10.012693 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 808 871 000ns (GuestNow=1 744 994 370 727 038 000 ns GuestLast=1 744 976 358 918 167 000 ns fSetTimeLastLoop=true )
2025-04-18 11:39:37 (992): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-18 11:39:38 (992): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-18 11:39:38 (992): Guest Log: 2.6.3.0 1585 0 30164 145009 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-18 11:39:39 (992): Guest Log: copied the webapp to /var/www
2025-04-18 11:39:39 (992): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-18 11:39:39 (992): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-18 11:39:39 (992): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-18 11:39:39 (992): Guest Log:  *** Starting ATLAS job. (PandaID=6605315098 taskID=44075483) ***
2025-04-18 13:23:20 (992): Status Report: Elapsed Time: '6000.192019'
2025-04-18 13:23:20 (992): Status Report: CPU Time: '20661.156250'
2025-04-18 15:08:24 (992): Status Report: Elapsed Time: '12000.584967'
2025-04-18 15:08:24 (992): Status Report: CPU Time: '45642.921875'
2025-04-18 15:23:29 (992): Guest Log:  *** Job finished ***
2025-04-18 15:23:29 (992): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:17,120 | INFO     | [data] copytool_out thread has finished
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:17,727 | INFO     | [job] control thread has finished
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:20,492 | INFO     | [data] queue_monitor thread has finished
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:22,526 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090054534976)>', '<ExcThread(monitor, started 140088872789760)>']
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:23,225 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:23,225 | INFO     | [monitor] control thread has ended
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,531 | INFO     | all workflow threads have been joined
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,531 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,531 | INFO     | traces error code: 0
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,622 [wrapper] ==== pilot stdout END ====
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,628 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,635 [wrapper] pilotpid: 5914
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,642 [wrapper] Pilot exit status: 0
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,763 [wrapper] pandaids: 6605315098
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,808 [wrapper] cleanup supervisor_pilot 13739 5915
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,816 [wrapper] Test setup, not cleaning
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,822 [wrapper] apfmon messages muted
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,829 [wrapper] ==== wrapper stdout END ====
2025-04-18 15:23:29 (992): Guest Log: 2025-04-18 20:23:27,835 [wrapper] ==== wrapper stderr END ====
2025-04-18 15:23:29 (992): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 15:23:29 (992): Guest Log:     "exeErrorCode": 0,
2025-04-18 15:23:29 (992): Guest Log:     "exeErrorDiag": "",
2025-04-18 15:23:29 (992): Guest Log:     "pilotErrorCode": 0,
2025-04-18 15:23:29 (992): Guest Log:     "pilotErrorDiag": "",
2025-04-18 15:23:29 (992): Guest Log:  *** Listing of results directory ***
2025-04-18 15:23:29 (992): Guest Log: total 192628
2025-04-18 15:23:29 (992): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 11:57 pilot3.tar.gz
2025-04-18 15:23:29 (992): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 12:01 runpilot2-wrapper.sh
2025-04-18 15:23:29 (992): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 12:01 queuedata.json
2025-04-18 15:23:29 (992): Guest Log: -rwxr-xr-x. 1 atlas atlas      9042 Apr 18 16:39 init_data.xml
2025-04-18 15:23:29 (992): Guest Log: -rwxr-xr-x. 1 atlas atlas    508891 Apr 18 16:39 input.tar.gz
2025-04-18 15:23:29 (992): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 18 16:39 start_atlas.sh
2025-04-18 15:23:29 (992): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 18 16:39 EVNT.44075481._002158.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 15:23:29 (992): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 18 16:39 pandaJob.out
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas       424 Apr 18 16:39 setup.sh.local
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas    990596 Apr 18 16:40 agis_schedconf.cvmfs.json
2025-04-18 15:23:29 (992): Guest Log: drwx------. 4 atlas atlas      4096 Apr 18 16:40 pilot3
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas 190610446 Apr 18 20:22 HITS.44075483._055469.pool.root.1
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas        95 Apr 18 20:22 pilot_heartbeat.json
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas      1031 Apr 18 20:22 memory_monitor_summary.json
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 18 20:22 agis_ddmendpoints.agis.ALL.json
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas    318218 Apr 18 20:22 log.44075483._055469.job.log.tgz.1
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas      7691 Apr 18 20:23 heartbeat.json
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas      4599 Apr 18 20:23 pilotlog.txt
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas   1103778 Apr 18 20:23 log.44075483._055469.job.log.1
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas       357 Apr 18 20:23 output.list
2025-04-18 15:23:29 (992): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 18 20:23 runtime_log
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas   1443840 Apr 18 20:23 result.tar.gz
2025-04-18 15:23:29 (992): Guest Log: -rw-r--r--. 1 atlas atlas     10959 Apr 18 20:23 runtime_log.err
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas       667 Apr 18 20:23 b9JODmb6cP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmLw3KDmaF81Jm.diag
2025-04-18 15:23:29 (992): Guest Log: Looking for outputfile HITS.44075483._055469.pool.root.1
2025-04-18 15:23:29 (992): Guest Log: HITS file was successfully produced
2025-04-18 15:23:29 (992): Guest Log: -rw-------. 1 atlas atlas 190610446 Apr 18 20:22 /home/atlas/RunAtlas/HITS.44075483._055469.pool.root.1
2025-04-18 15:23:30 (992): Guest Log: Successfully finished the ATLAS job!
2025-04-18 15:23:30 (992): Guest Log: Copying the results back to the shared directory!
2025-04-18 15:23:30 (992): Guest Log:  *** Contents of shared directory: ***
2025-04-18 15:23:30 (992): Guest Log: total 407800
2025-04-18 15:23:30 (992): Guest Log: -rwxrwxrwx. 1 root root 224983218 Apr 18 16:38 ATLAS.root_0
2025-04-18 15:23:30 (992): Guest Log: -rwxrwxrwx. 1 root root 190610446 Apr 18 20:23 HITS.pool.root.1
2025-04-18 15:23:30 (992): Guest Log: -rwxrwxrwx. 1 root root      9042 Apr 18 16:38 init_data.xml
2025-04-18 15:23:30 (992): Guest Log: -rwxrwxrwx. 1 root root    508891 Apr 18 16:38 input.tar.gz
2025-04-18 15:23:30 (992): Guest Log: -rwxrwxrwx. 1 root root   1443840 Apr 18 20:23 result.tar.gz
2025-04-18 15:23:30 (992): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 18 16:38 start_atlas.sh
2025-04-18 15:23:30 (992): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 15:23:30 (992): VM Completion File Detected.
2025-04-18 15:23:30 (992): Powering off VM.
2025-04-18 15:23:30 (992): Successfully stopped VM.
2025-04-18 15:23:30 (992): Deregistering VM. (boinc_4c7c46f6ea6cc614, slot#0)
2025-04-18 15:23:30 (992): Removing network bandwidth throttle group from VM.
2025-04-18 15:23:31 (992): Removing VM from VirtualBox.
15:23:36 (992): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN