Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:09:29 (26859): wrapper (7.7.26015): starting
12:09:29 (26859): wrapper: running run_atlas (--nthreads 8)
[2025-04-17 12:09:29] Arguments: --nthreads 8
[2025-04-17 12:09:29] Threads: 8
[2025-04-17 12:09:29] Checking for CVMFS
[2025-04-17 12:09:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 12:09:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 12:09:29] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 12:09:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 12:09:29] 2.11.2.0 2856 130827 115420 144971 1 55 10393834 20275200 1 130560 0 18577799 99.987 7457971 44770 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 12:09:29] CVMFS is ok
[2025-04-17 12:09:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 12:09:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 12:09:29] Further information can be found at the LHC@home message board.
[2025-04-17 12:09:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 12:09:29] Checking for apptainer binary...
[2025-04-17 12:09:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 12:09:29] Running /usr/bin/apptainer --version
[2025-04-17 12:09:29] apptainer version 1.3.2-1.el7
[2025-04-17 12:09:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 12:09:31] c-204-27.aglt2.org
[2025-04-17 12:09:31] apptainer works
[2025-04-17 12:09:31] Set ATHENA_PROC_NUMBER=8
[2025-04-17 12:09:31] Set ATHENA_CORE_NUMBER=8
[2025-04-17 12:09:31] Starting ATLAS job with PandaID=6603689680
[2025-04-17 12:09:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 14:27:26]  *** The last 200 lines of the pilot log: ***
[2025-04-17 14:27:26] 2025-04-17 18:27:06,368 | INFO     | mean y: 2427960.422222222
[2025-04-17 14:27:26] 2025-04-17 18:27:06,368 | INFO     | -- intersect: -72019468377.0308
[2025-04-17 14:27:26] 2025-04-17 18:27:06,368 | INFO     | intersect: -72019468377.0308
[2025-04-17 14:27:26] 2025-04-17 18:27:06,368 | INFO     | chi2: 3.7960707354888967
[2025-04-17 14:27:26] 2025-04-17 18:27:06,369 | INFO     | sum of square deviations: 681212772.5
[2025-04-17 14:27:26] 2025-04-17 18:27:06,370 | INFO     | sum of deviations: 39678581092.5
[2025-04-17 14:27:26] 2025-04-17 18:27:06,370 | INFO     | mean x: 1744910152.5
[2025-04-17 14:27:26] 2025-04-17 18:27:06,370 | INFO     | mean y: 2442731.4846153846
[2025-04-17 14:27:26] 2025-04-17 18:27:06,370 | INFO     | -- intersect: -101633289568.43756
[2025-04-17 14:27:26] 2025-04-17 18:27:06,370 | INFO     | intersect: -101633289568.43756
[2025-04-17 14:27:26] 2025-04-17 18:27:06,371 | INFO     | chi2: 2.956828672280738
[2025-04-17 14:27:26] 2025-04-17 18:27:06,371 | INFO     | current chi2=2.956828672280738 (change=22.108177683893253 %)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,371 | INFO     | right removable region: 129
[2025-04-17 14:27:26] 2025-04-17 18:27:06,371 | INFO     | sum of square deviations: 681212772.5
[2025-04-17 14:27:26] 2025-04-17 18:27:06,372 | INFO     | sum of deviations: -117671257.0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,372 | INFO     | mean x: 1744910457.5
[2025-04-17 14:27:26] 2025-04-17 18:27:06,372 | INFO     | mean y: 2486683.0615384616
[2025-04-17 14:27:26] 2025-04-17 18:27:06,372 | INFO     | -- intersect: 303898833.8245662
[2025-04-17 14:27:26] 2025-04-17 18:27:06,372 | INFO     | intersect: 303898833.8245662
[2025-04-17 14:27:26] 2025-04-17 18:27:06,373 | INFO     | chi2: 1.4836857871860514
[2025-04-17 14:27:26] 2025-04-17 18:27:06,373 | INFO     | current chi2=1.4836857871860514 (change=60.91522285622091 %)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,373 | INFO     | sum of square deviations: 605592750.0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,374 | INFO     | sum of deviations: -13886620109.999998
[2025-04-17 14:27:26] 2025-04-17 18:27:06,374 | INFO     | mean x: 1744910610.0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,374 | INFO     | mean y: 2514111.048
[2025-04-17 14:27:26] 2025-04-17 18:27:06,374 | INFO     | -- intersect: 40014404555.53956
[2025-04-17 14:27:26] 2025-04-17 18:27:06,374 | INFO     | intersect: 40014404555.53956
[2025-04-17 14:27:26] 2025-04-17 18:27:06,375 | INFO     | chi2: 0.9184383062506848
[2025-04-17 14:27:26] 2025-04-17 18:27:06,375 | INFO     | current chi2=0.9184383062506848 (change=38.097519422047654 %)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,375 | INFO     | sum of square deviations: 535786790.0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,376 | INFO     | sum of deviations: -15422395058.5
[2025-04-17 14:27:26] 2025-04-17 18:27:06,376 | INFO     | mean x: 1744910762.5
[2025-04-17 14:27:26] 2025-04-17 18:27:06,376 | INFO     | mean y: 2517373.275
[2025-04-17 14:27:26] 2025-04-17 18:27:06,376 | INFO     | -- intersect: 50229032142.52392
[2025-04-17 14:27:26] 2025-04-17 18:27:06,376 | INFO     | intersect: 50229032142.52392
[2025-04-17 14:27:26] 2025-04-17 18:27:06,377 | INFO     | chi2: 0.8936635843539097
[2025-04-17 14:27:26] 2025-04-17 18:27:06,377 | INFO     | sufficient remaining disk space (18572378112 B)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,377 | INFO     | current chi2=0.8936635843539097 (change=2.6974835139348943 %)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,378 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,378 | INFO     | left removable region: 30
[2025-04-17 14:27:26] 2025-04-17 18:27:06,378 | INFO     | sum of square deviations: 300842850.0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,379 | INFO     | sum of deviations: -5313131537.0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,379 | INFO     | mean x: 1744911037.0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,379 | INFO     | mean y: 2535000.202020202
[2025-04-17 14:27:26] 2025-04-17 18:27:06,379 | INFO     | -- intersect: 30819095406.88635
[2025-04-17 14:27:26] 2025-04-17 18:27:06,380 | INFO     | intersect: 30819095406.88635
[2025-04-17 14:27:26] 2025-04-17 18:27:06,380 | INFO     | chi2: 0.008655412976386867
[2025-04-17 14:27:26] 2025-04-17 18:27:06,380 | INFO     | -- intersect: 30819095406.88635
[2025-04-17 14:27:26] 2025-04-17 18:27:06,380 | INFO     | current memory leak: -17.66 B/s (using 99 data points, chi2=0.01)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,381 | INFO     | ..............................
[2025-04-17 14:27:26] 2025-04-17 18:27:06,381 | INFO     | . Timing measurements:
[2025-04-17 14:27:26] 2025-04-17 18:27:06,381 | INFO     | . get job = 0 s
[2025-04-17 14:27:26] 2025-04-17 18:27:06,381 | INFO     | . initial setup = 2 s
[2025-04-17 14:27:26] 2025-04-17 18:27:06,381 | INFO     | . payload setup = 8 s
[2025-04-17 14:27:26] 2025-04-17 18:27:06,382 | INFO     | . stage-in = 0 s
[2025-04-17 14:27:26] 2025-04-17 18:27:06,382 | INFO     | . payload execution = 8203 s
[2025-04-17 14:27:26] 2025-04-17 18:27:06,382 | INFO     | . stage-out = 0 s
[2025-04-17 14:27:26] 2025-04-17 18:27:06,382 | INFO     | . log creation = 0 s
[2025-04-17 14:27:26] 2025-04-17 18:27:06,382 | INFO     | ..............................
[2025-04-17 14:27:26] 2025-04-17 18:27:06,479 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6603689680: 3503353 B (within 2537553920 B limit)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,479 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6603689680/HITS.44075483._030326.pool.root.1 does not exist (skip from workdir size calculation)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,479 | INFO     | total size of present files: 0 B (workdir size: 3503353 B)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,479 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6603689680/HITS.44075483._030326.pool.root.1 since it does not exist
[2025-04-17 14:27:26] 2025-04-17 18:27:06,568 | INFO     | number of running child processes to parent process 4767: 1
[2025-04-17 14:27:26] 2025-04-17 18:27:06,568 | INFO     | maximum number of monitored processes: 6
[2025-04-17 14:27:26] 2025-04-17 18:27:06,568 | INFO     | aborting job monitoring since job object (job id=6603689680) has expired
[2025-04-17 14:27:26] 2025-04-17 18:27:06,754 | INFO     | 
[2025-04-17 14:27:26] 2025-04-17 18:27:06,755 | INFO     | job summary report
[2025-04-17 14:27:26] 2025-04-17 18:27:06,755 | INFO     | --------------------------------------------------
[2025-04-17 14:27:26] 2025-04-17 18:27:06,755 | INFO     | PanDA job id: 6603689680
[2025-04-17 14:27:26] 2025-04-17 18:27:06,755 | INFO     | task id: 44075483
[2025-04-17 14:27:26] 2025-04-17 18:27:06,755 | INFO     | errors: (none)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,756 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 14:27:26] 2025-04-17 18:27:06,756 | INFO     | pilot state: finished 
[2025-04-17 14:27:26] 2025-04-17 18:27:06,756 | INFO     | transexitcode: 0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,756 | INFO     | exeerrorcode: 0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,756 | INFO     | exeerrordiag: 
[2025-04-17 14:27:26] 2025-04-17 18:27:06,756 | INFO     | exitcode: 0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,757 | INFO     | exitmsg: OK
[2025-04-17 14:27:26] 2025-04-17 18:27:06,757 | INFO     | cpuconsumptiontime: 58556 s
[2025-04-17 14:27:26] 2025-04-17 18:27:06,757 | INFO     | nevents: 400
[2025-04-17 14:27:26] 2025-04-17 18:27:06,757 | INFO     | neventsw: 0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,757 | INFO     | pid: 4767
[2025-04-17 14:27:26] 2025-04-17 18:27:06,758 | INFO     | pgrp: 4767
[2025-04-17 14:27:26] 2025-04-17 18:27:06,758 | INFO     | corecount: 8
[2025-04-17 14:27:26] 2025-04-17 18:27:06,758 | INFO     | event service: False
[2025-04-17 14:27:26] 2025-04-17 18:27:06,758 | INFO     | sizes: {0: 2426652, 1: 2426851, 7: 2427057, 12: 2427085, 8213: 2454680, 8214: 2454679, 8216: 2463804, 8217: 2463860, 8223: 2464030}
[2025-04-17 14:27:26] 2025-04-17 18:27:06,758 | INFO     | --------------------------------------------------
[2025-04-17 14:27:26] 2025-04-17 18:27:06,758 | INFO     | 
[2025-04-17 14:27:26] 2025-04-17 18:27:06,759 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 14:27:26] 2025-04-17 18:27:06,787 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,787 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,788 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,788 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,788 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,788 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,788 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,789 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,789 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,789 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,789 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,789 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,791 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,791 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 14:27:26] 2025-04-17 18:27:06,791 | INFO     | job 6603689680 has completed (purged errors)
[2025-04-17 14:27:26] 2025-04-17 18:27:06,791 | INFO     | overall cleanup function is called
[2025-04-17 14:27:26] 2025-04-17 18:27:07,799 | INFO     | --- collectZombieJob: --- 10, [4767]
[2025-04-17 14:27:26] 2025-04-17 18:27:07,799 | INFO     | zombie collector waiting for pid 4767
[2025-04-17 14:27:26] 2025-04-17 18:27:07,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 14:27:26] 2025-04-17 18:27:07,800 | INFO     | collected zombie processes
[2025-04-17 14:27:26] 2025-04-17 18:27:07,800 | INFO     | will attempt to kill all subprocesses of pid=4767
[2025-04-17 14:27:26] 2025-04-17 18:27:07,890 | INFO     | process IDs to be killed: [4767] (in reverse order)
[2025-04-17 14:27:26] 2025-04-17 18:27:07,946 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 14:27:26] 2025-04-17 18:27:07,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 14:27:26] 2025-04-17 18:27:07,950 | INFO     | did not find any defunct processes belonging to 4767
[2025-04-17 14:27:26] 2025-04-17 18:27:07,953 | INFO     | did not find any defunct processes belonging to 4767
[2025-04-17 14:27:26] 2025-04-17 18:27:07,953 | INFO     | ready for new job
[2025-04-17 14:27:26] 2025-04-17 18:27:07,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 14:27:26] 2025-04-17 18:27:07,955 | INFO     | **************************************
[2025-04-17 14:27:26] 2025-04-17 18:27:07,955 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 14:27:26] 2025-04-17 18:27:07,955 | INFO     | **************************************
[2025-04-17 14:27:26] 2025-04-17 18:27:07,955 | INFO     | 
[2025-04-17 14:27:26] 2025-04-17 18:27:07,956 | INFO     | architecture information:
[2025-04-17 14:27:26] 2025-04-17 18:27:07,956 | INFO     | executing command: cat /etc/os-release
[2025-04-17 14:27:26] 2025-04-17 18:27:07,975 | INFO     | cat /etc/os-release:
[2025-04-17 14:27:26] NAME="CentOS Linux"
[2025-04-17 14:27:26] VERSION="7 (Core)"
[2025-04-17 14:27:26] ID="centos"
[2025-04-17 14:27:26] ID_LIKE="rhel fedora"
[2025-04-17 14:27:26] VERSION_ID="7"
[2025-04-17 14:27:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 14:27:26] ANSI_COLOR="0;31"
[2025-04-17 14:27:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 14:27:26] HOME_URL="https://www.centos.org/"
[2025-04-17 14:27:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 14:27:26] 
[2025-04-17 14:27:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 14:27:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 14:27:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 14:27:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 14:27:26] 
[2025-04-17 14:27:26] 2025-04-17 18:27:07,976 | INFO     | **************************************
[2025-04-17 14:27:26] 2025-04-17 18:27:08,479 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 14:27:26] 2025-04-17 18:27:08,499 | INFO     | sufficient remaining disk space (18576572416 B)
[2025-04-17 14:27:26] 2025-04-17 18:27:08,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 14:27:26] 2025-04-17 18:27:08,500 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 14:27:26] 2025-04-17 18:27:08,500 | INFO     | update_server=False
[2025-04-17 14:27:26] 2025-04-17 18:27:08,500 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 14:27:26] 2025-04-17 18:27:08,500 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 14:27:26] 2025-04-17 18:27:08,501 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 14:27:26] 2025-04-17 18:27:08,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 14:27:26] 2025-04-17 18:27:08,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 14:27:26] 2025-04-17 18:27:08,502 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 14:27:26] 2025-04-17 18:27:08,502 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 14:27:26] 2025-04-17 18:27:08,503 | INFO     | aborting loop
[2025-04-17 14:27:26] 2025-04-17 18:27:09,124 | INFO     | all data control threads have been joined
[2025-04-17 14:27:26] 2025-04-17 18:27:09,131 | INFO     | all payload control threads have been joined
[2025-04-17 14:27:26] 2025-04-17 18:27:09,335 | INFO     | all job control threads have been joined
[2025-04-17 14:27:26] 2025-04-17 18:27:09,506 | INFO     | [job] retrieve thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:09,508 | INFO     | [job] job monitor thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:09,869 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:09,878 | INFO     | [payload] validate_post thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:09,918 | INFO     | [data] copytool_in thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:10,014 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:10,132 | INFO     | [data] control thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:10,137 | INFO     | [payload] control thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:10,281 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:10,341 | INFO     | [job] control thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:10,508 | INFO     | [data] copytool_out thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:10,821 | INFO     | [job] validate thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:10,963 | INFO     | [payload] failed_post thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:11,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 14:27:26] 2025-04-17 18:27:11,490 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 14:27:26] 2025-04-17 18:27:12,496 | INFO     | [job] queue monitor thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:15,196 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:19,527 | INFO     | job.realtimelogging is not enabled
[2025-04-17 14:27:26] 2025-04-17 18:27:20,533 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 14:27:26] 2025-04-17 18:27:21,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716952049472)>', '<ExcThread(monitor, started 139716192089856)>']
[2025-04-17 14:27:26] 2025-04-17 18:27:21,549 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 14:27:26] 2025-04-17 18:27:21,550 | INFO     | [monitor] control thread has ended
[2025-04-17 14:27:26] 2025-04-17 18:27:26,459 | INFO     | all workflow threads have been joined
[2025-04-17 14:27:26] 2025-04-17 18:27:26,459 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 14:27:26] 2025-04-17 18:27:26,460 | INFO     | traces error code: 0
[2025-04-17 14:27:26] 2025-04-17 18:27:26,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 14:27:26] 2025-04-17 18:27:26,581 [wrapper] ==== pilot stdout END ====
[2025-04-17 14:27:26] 2025-04-17 18:27:26,586 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 14:27:26] 2025-04-17 18:27:26,590 [wrapper] pilotpid: 30593
[2025-04-17 14:27:26] 2025-04-17 18:27:26,595 [wrapper] Pilot exit status: 0
[2025-04-17 14:27:26] 2025-04-17 18:27:26,614 [wrapper] pandaids: 6603689680
[2025-04-17 14:27:26] 2025-04-17 18:27:26,660 [wrapper] cleanup supervisor_pilot  8898 30594
[2025-04-17 14:27:26] 2025-04-17 18:27:26,665 [wrapper] Test setup, not cleaning
[2025-04-17 14:27:26] 2025-04-17 18:27:26,671 [wrapper] apfmon messages muted
[2025-04-17 14:27:26] 2025-04-17 18:27:26,676 [wrapper] ==== wrapper stdout END ====
[2025-04-17 14:27:26] 2025-04-17 18:27:26,680 [wrapper] ==== wrapper stderr END ====
[2025-04-17 14:27:26]  *** Error codes and diagnostics ***
[2025-04-17 14:27:26]     "exeErrorCode": 0,
[2025-04-17 14:27:26]     "exeErrorDiag": "",
[2025-04-17 14:27:26]     "pilotErrorCode": 0,
[2025-04-17 14:27:26]     "pilotErrorDiag": "",
[2025-04-17 14:27:26]  *** Listing of results directory ***
[2025-04-17 14:27:26] total 421508
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas    495897 Apr 15 13:21 pilot3.tar.gz
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas      5111 Apr 15 13:22 queuedata.json
[2025-04-17 14:27:26] -rwx------ 1 boincer umatlas     37140 Apr 15 13:24 runpilot2-wrapper.sh
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas       100 Apr 17 12:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 14:27:26] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 12:09 run_atlas
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas       105 Apr 17 12:09 job.xml
[2025-04-17 14:27:26] -rw-r--r-- 2 boincer umatlas 226391398 Apr 17 12:09 EVNT.44075481._001187.pool.root.1
[2025-04-17 14:27:26] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 12:09 start_atlas.sh
[2025-04-17 14:27:26] drwxrwx--x 2 boincer umatlas      4096 Apr 17 12:09 shared
[2025-04-17 14:27:26] -rw-r--r-- 2 boincer umatlas    508896 Apr 17 12:09 input.tar.gz
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas         0 Apr 17 12:09 boinc_lockfile
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas      2578 Apr 17 12:09 pandaJob.out
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas       462 Apr 17 12:09 setup.sh.local
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas    990266 Apr 17 12:09 agis_schedconf.cvmfs.json
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas   1618536 Apr 17 12:09 agis_ddmendpoints.agis.ALL.json
[2025-04-17 14:27:26] drwx------ 4 boincer umatlas      4096 Apr 17 12:09 pilot3
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas 199194061 Apr 17 14:26 HITS.44075483._030326.pool.root.1
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas        95 Apr 17 14:26 pilot_heartbeat.json
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas       529 Apr 17 14:26 boinc_task_state.xml
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas      1051 Apr 17 14:26 memory_monitor_summary.json
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas    336945 Apr 17 14:26 log.44075483._030326.job.log.tgz.1
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas      5905 Apr 17 14:27 init_data.xml
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas      7752 Apr 17 14:27 heartbeat.json
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 14:27 boinc_mmap_file
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas        27 Apr 17 14:27 wrapper_checkpoint.txt
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas      4548 Apr 17 14:27 pilotlog.txt
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas    749815 Apr 17 14:27 log.44075483._030326.job.log.1
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas       357 Apr 17 14:27 output.list
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas       620 Apr 17 14:27 runtime_log
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas   1105920 Apr 17 14:27 result.tar.gz
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas     11388 Apr 17 14:27 runtime_log.err
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas       660 Apr 17 14:27 CrrKDmOCzO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmLbYLDmmDFiQo.diag
[2025-04-17 14:27:26] -rw-r--r-- 1 boincer umatlas     21171 Apr 17 14:27 stderr.txt
[2025-04-17 14:27:26] HITS file was successfully produced:
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas 199194061 Apr 17 14:26 shared/HITS.pool.root.1
[2025-04-17 14:27:26]  *** Contents of shared directory: ***
[2025-04-17 14:27:26] total 417220
[2025-04-17 14:27:26] -rw-r--r-- 2 boincer umatlas 226391398 Apr 17 12:09 ATLAS.root_0
[2025-04-17 14:27:26] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 12:09 start_atlas.sh
[2025-04-17 14:27:26] -rw-r--r-- 2 boincer umatlas    508896 Apr 17 12:09 input.tar.gz
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas 199194061 Apr 17 14:26 HITS.pool.root.1
[2025-04-17 14:27:26] -rw------- 1 boincer umatlas   1105920 Apr 17 14:27 result.tar.gz
14:27:28 (26859): run_atlas exited; CPU time 58498.943580
14:27:28 (26859): called boinc_finish(0)

</stderr_txt>
]]>

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