Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:50:40 (23065): wrapper (7.7.26015): starting
10:50:40 (23065): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 10:50:40] Arguments: --nthreads 10
[2025-04-17 10:50:40] Threads: 10
[2025-04-17 10:50:40] Checking for CVMFS
[2025-04-17 10:50:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 10:50:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 10:50:42] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 10:50:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 10:50:44] 2.11.2.0 18412 38389 134840 144968 3 550 13838682 18432000 10695 130560 0 72652493 98.432 253023371 39559 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 10:50:44] CVMFS is ok
[2025-04-17 10:50:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 10:50:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 10:50:44] Further information can be found at the LHC@home message board.
[2025-04-17 10:50:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 10:50:44] Checking for apptainer binary...
[2025-04-17 10:50:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 10:50:44] Running /usr/bin/apptainer --version
[2025-04-17 10:50:44] apptainer version 1.3.2-1.el7
[2025-04-17 10:50:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 10:51:21] c-210-13.aglt2.org
[2025-04-17 10:51:21] apptainer works
[2025-04-17 10:51:21] Set ATHENA_PROC_NUMBER=10
[2025-04-17 10:51:21] Set ATHENA_CORE_NUMBER=10
[2025-04-17 10:51:21] Starting ATLAS job with PandaID=6605314740
[2025-04-17 10:51:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 21:50:03]  *** The last 200 lines of the pilot log: ***
[2025-04-17 21:50:03] 2025-04-18 01:49:37,347 | INFO     | sum of deviations: 622996872091.8977
[2025-04-17 21:50:03] 2025-04-18 01:49:37,375 | INFO     | mean x: 1744921761.2647529
[2025-04-17 21:50:03] 2025-04-18 01:49:37,375 | INFO     | mean y: 2512060.5247208932
[2025-04-17 21:50:03] 2025-04-18 01:49:37,375 | INFO     | -- intersect: -14220199724.97578
[2025-04-17 21:50:03] 2025-04-18 01:49:37,375 | INFO     | intersect: -14220199724.97578
[2025-04-17 21:50:03] 2025-04-18 01:49:37,376 | INFO     | chi2: 10.107047227511309
[2025-04-17 21:50:03] 2025-04-18 01:49:37,376 | INFO     | current chi2=10.107047227511309 (change=26.254152472723696 %)
[2025-04-17 21:50:03] 2025-04-18 01:49:37,399 | INFO     | sum of square deviations: 74618613648.1239
[2025-04-17 21:50:03] 2025-04-18 01:49:37,511 | INFO     | sum of deviations: 452456340779.5261
[2025-04-17 21:50:03] 2025-04-18 01:49:37,511 | INFO     | mean x: 1744921913.7700965
[2025-04-17 21:50:03] 2025-04-18 01:49:37,511 | INFO     | mean y: 2526394.7379421224
[2025-04-17 21:50:03] 2025-04-18 01:49:37,512 | INFO     | -- intersect: -10577956750.840786
[2025-04-17 21:50:03] 2025-04-18 01:49:37,512 | INFO     | intersect: -10577956750.840786
[2025-04-17 21:50:03] 2025-04-18 01:49:37,513 | INFO     | chi2: 7.506978382101571
[2025-04-17 21:50:03] 2025-04-18 01:49:37,513 | INFO     | current chi2=7.506978382101571 (change=25.72530618371278 %)
[2025-04-17 21:50:03] 2025-04-18 01:49:37,546 | INFO     | sum of square deviations: 72833344606.05193
[2025-04-17 21:50:03] 2025-04-18 01:49:37,655 | INFO     | sum of deviations: 303955730148.25323
[2025-04-17 21:50:03] 2025-04-18 01:49:37,655 | INFO     | mean x: 1744922066.2787683
[2025-04-17 21:50:03] 2025-04-18 01:49:37,656 | INFO     | mean y: 2539077.8589951377
[2025-04-17 21:50:03] 2025-04-18 01:49:37,656 | INFO     | -- intersect: -7279552161.755602
[2025-04-17 21:50:03] 2025-04-18 01:49:37,656 | INFO     | intersect: -7279552161.755602
[2025-04-17 21:50:03] 2025-04-18 01:49:37,657 | INFO     | chi2: 5.575986805387857
[2025-04-17 21:50:03] 2025-04-18 01:49:37,657 | INFO     | current chi2=5.575986805387857 (change=25.72262071937837 %)
[2025-04-17 21:50:03] 2025-04-18 01:49:37,695 | INFO     | sum of square deviations: 71076848687.52943
[2025-04-17 21:50:03] 2025-04-18 01:49:37,810 | INFO     | sum of deviations: 171747287185.15692
[2025-04-17 21:50:03] 2025-04-18 01:49:37,811 | INFO     | mean x: 1744922218.7843137
[2025-04-17 21:50:03] 2025-04-18 01:49:37,811 | INFO     | mean y: 2550556.5996732027
[2025-04-17 21:50:03] 2025-04-18 01:49:37,811 | INFO     | -- intersect: -4213810508.348485
[2025-04-17 21:50:03] 2025-04-18 01:49:37,811 | INFO     | intersect: -4213810508.348485
[2025-04-17 21:50:03] 2025-04-18 01:49:37,812 | INFO     | chi2: 4.066317120064523
[2025-04-17 21:50:03] 2025-04-18 01:49:37,812 | INFO     | current chi2=4.066317120064523 (change=27.074484535447596 %)
[2025-04-17 21:50:03] 2025-04-18 01:49:37,840 | INFO     | sum of square deviations: 69348743873.80243
[2025-04-17 21:50:03] 2025-04-18 01:49:37,965 | INFO     | sum of deviations: 60279501988.945694
[2025-04-17 21:50:03] 2025-04-18 01:49:37,965 | INFO     | mean x: 1744922371.2932456
[2025-04-17 21:50:03] 2025-04-18 01:49:37,966 | INFO     | mean y: 2560386.230642504
[2025-04-17 21:50:03] 2025-04-18 01:49:37,966 | INFO     | -- intersect: -1514165738.5039911
[2025-04-17 21:50:03] 2025-04-18 01:49:37,966 | INFO     | intersect: -1514165738.5039911
[2025-04-17 21:50:03] 2025-04-18 01:49:37,990 | INFO     | chi2: 2.9654035007641073
[2025-04-17 21:50:03] 2025-04-18 01:49:38,002 | INFO     | current chi2=2.9654035007641073 (change=27.07397349479096 %)
[2025-04-17 21:50:03] 2025-04-18 01:49:38,016 | INFO     | sum of square deviations: 67648909786.07953
[2025-04-17 21:50:03] 2025-04-18 01:49:38,127 | INFO     | sum of deviations: -1769095208.8837662
[2025-04-17 21:50:03] 2025-04-18 01:49:38,128 | INFO     | mean x: 1744922523.8006644
[2025-04-17 21:50:03] 2025-04-18 01:49:38,128 | INFO     | mean y: 2565951.2093023257
[2025-04-17 21:50:03] 2025-04-18 01:49:38,128 | INFO     | -- intersect: 48197641.15804914
[2025-04-17 21:50:03] 2025-04-18 01:49:38,128 | INFO     | intersect: 48197641.15804914
[2025-04-17 21:50:03] 2025-04-18 01:49:38,152 | INFO     | chi2: 2.6381089394753685
[2025-04-17 21:50:03] 2025-04-18 01:49:38,153 | INFO     | current chi2=2.6381089394753685 (change=11.037100388004651 %)
[2025-04-17 21:50:03] 2025-04-18 01:49:38,153 | INFO     | left removable region: 70
[2025-04-17 21:50:03] 2025-04-18 01:49:38,177 | INFO     | sum of square deviations: 54746232844.28911
[2025-04-17 21:50:03] 2025-04-18 01:49:38,261 | INFO     | sum of deviations: 49863941573.181755
[2025-04-17 21:50:03] 2025-04-18 01:49:38,261 | INFO     | mean x: 1744923408.342246
[2025-04-17 21:50:03] 2025-04-18 01:49:38,261 | INFO     | mean y: 2584169.0303030303
[2025-04-17 21:50:03] 2025-04-18 01:49:38,261 | INFO     | -- intersect: -1586726261.3463016
[2025-04-17 21:50:03] 2025-04-18 01:49:38,262 | INFO     | intersect: -1586726261.3463016
[2025-04-17 21:50:03] 2025-04-18 01:49:38,297 | INFO     | chi2: 0.0036579555687460993
[2025-04-17 21:50:03] 2025-04-18 01:49:38,298 | INFO     | -- intersect: -1586726261.3463016
[2025-04-17 21:50:03] 2025-04-18 01:49:38,298 | INFO     | current memory leak: 0.91 B/s (using 561 data points, chi2=0.00)
[2025-04-17 21:50:03] 2025-04-18 01:49:38,299 | INFO     | ..............................
[2025-04-17 21:50:03] 2025-04-18 01:49:38,299 | INFO     | . Timing measurements:
[2025-04-17 21:50:03] 2025-04-18 01:49:38,299 | INFO     | . get job = 0 s
[2025-04-17 21:50:03] 2025-04-18 01:49:38,299 | INFO     | . initial setup = 14 s
[2025-04-17 21:50:03] 2025-04-18 01:49:38,299 | INFO     | . payload setup = 115 s
[2025-04-17 21:50:03] 2025-04-18 01:49:38,299 | INFO     | . stage-in = 0 s
[2025-04-17 21:50:03] 2025-04-18 01:49:38,299 | INFO     | . payload execution = 38974 s
[2025-04-17 21:50:03] 2025-04-18 01:49:38,300 | INFO     | . stage-out = 10 s
[2025-04-17 21:50:03] 2025-04-18 01:49:38,300 | INFO     | . log creation = 2 s
[2025-04-17 21:50:03] 2025-04-18 01:49:38,300 | INFO     | ..............................
[2025-04-17 21:50:03] 2025-04-18 01:49:39,952 | INFO     | 
[2025-04-17 21:50:03] 2025-04-18 01:49:39,953 | INFO     | job summary report
[2025-04-17 21:50:03] 2025-04-18 01:49:39,953 | INFO     | --------------------------------------------------
[2025-04-17 21:50:03] 2025-04-18 01:49:39,953 | INFO     | PanDA job id: 6605314740
[2025-04-17 21:50:03] 2025-04-18 01:49:39,953 | INFO     | task id: 44075483
[2025-04-17 21:50:03] 2025-04-18 01:49:39,953 | INFO     | errors: (none)
[2025-04-17 21:50:03] 2025-04-18 01:49:39,953 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 21:50:03] 2025-04-18 01:49:39,966 | INFO     | pilot state: finished 
[2025-04-17 21:50:03] 2025-04-18 01:49:39,966 | INFO     | transexitcode: 0
[2025-04-17 21:50:03] 2025-04-18 01:49:39,966 | INFO     | exeerrorcode: 0
[2025-04-17 21:50:03] 2025-04-18 01:49:39,966 | INFO     | exeerrordiag: 
[2025-04-17 21:50:03] 2025-04-18 01:49:39,966 | INFO     | exitcode: 0
[2025-04-17 21:50:03] 2025-04-18 01:49:39,966 | INFO     | exitmsg: OK
[2025-04-17 21:50:03] 2025-04-18 01:49:39,966 | INFO     | cpuconsumptiontime: 56825 s
[2025-04-17 21:50:03] 2025-04-18 01:49:39,980 | INFO     | nevents: 400
[2025-04-17 21:50:03] 2025-04-18 01:49:39,980 | INFO     | neventsw: 0
[2025-04-17 21:50:03] 2025-04-18 01:49:39,980 | INFO     | pid: 6294
[2025-04-17 21:50:03] 2025-04-18 01:49:39,980 | INFO     | pgrp: 6294
[2025-04-17 21:50:03] 2025-04-18 01:49:39,980 | INFO     | corecount: 10
[2025-04-17 21:50:03] 2025-04-18 01:49:39,980 | INFO     | event service: False
[2025-04-17 21:50:03] 2025-04-18 01:49:39,997 | INFO     | sizes: {0: 2425995, 2: 2426680, 4: 2426680, 5: 2426879, 6: 2426963, 18: 2426963, 30: 2427119, 41: 2427147, 52: 2427175, 64: 2427203, 71: 2427465, 75: 2427773, 3909
[2025-04-17 21:50:03] 2025-04-18 01:49:39,998 | INFO     | --------------------------------------------------
[2025-04-17 21:50:03] 2025-04-18 01:49:39,998 | INFO     | 
[2025-04-17 21:50:03] 2025-04-18 01:49:39,998 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-17 21:50:03] 2025-04-18 01:49:40,336 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,348 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,348 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,348 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,348 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,348 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,349 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,374 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,374 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,374 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,374 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 21:50:03] 2025-04-18 01:49:40,374 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,374 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 21:50:03] 2025-04-18 01:49:40,374 | INFO     | job 6605314740 has completed (purged errors)
[2025-04-17 21:50:03] 2025-04-18 01:49:40,374 | INFO     | overall cleanup function is called
[2025-04-17 21:50:03] 2025-04-18 01:49:41,456 | INFO     | --- collectZombieJob: --- 10, [6294]
[2025-04-17 21:50:03] 2025-04-18 01:49:41,457 | INFO     | zombie collector waiting for pid 6294
[2025-04-17 21:50:03] 2025-04-18 01:49:41,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 21:50:03] 2025-04-18 01:49:41,457 | INFO     | collected zombie processes
[2025-04-17 21:50:03] 2025-04-18 01:49:41,457 | INFO     | will attempt to kill all subprocesses of pid=6294
[2025-04-17 21:50:03] 2025-04-18 01:49:42,565 | INFO     | process IDs to be killed: [6294] (in reverse order)
[2025-04-17 21:50:03] 2025-04-18 01:49:43,519 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 21:50:03] 2025-04-18 01:49:43,519 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 21:50:03] 2025-04-18 01:49:43,550 | INFO     | did not find any defunct processes belonging to 6294
[2025-04-17 21:50:03] 2025-04-18 01:49:43,569 | INFO     | did not find any defunct processes belonging to 6294
[2025-04-17 21:50:03] 2025-04-18 01:49:43,569 | INFO     | ready for new job
[2025-04-17 21:50:03] 2025-04-18 01:49:43,570 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 21:50:03] 2025-04-18 01:49:43,584 | INFO     | **************************************
[2025-04-17 21:50:03] 2025-04-18 01:49:43,584 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 21:50:03] 2025-04-18 01:49:43,585 | INFO     | **************************************
[2025-04-17 21:50:03] 2025-04-18 01:49:43,585 | INFO     | 
[2025-04-17 21:50:03] 2025-04-18 01:49:43,599 | INFO     | architecture information:
[2025-04-17 21:50:03] 2025-04-18 01:49:43,600 | INFO     | executing command: cat /etc/os-release
[2025-04-17 21:50:03] 2025-04-18 01:49:43,784 | INFO     | cat /etc/os-release:
[2025-04-17 21:50:03] NAME="CentOS Linux"
[2025-04-17 21:50:03] VERSION="7 (Core)"
[2025-04-17 21:50:03] ID="centos"
[2025-04-17 21:50:03] ID_LIKE="rhel fedora"
[2025-04-17 21:50:03] VERSION_ID="7"
[2025-04-17 21:50:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 21:50:03] ANSI_COLOR="0;31"
[2025-04-17 21:50:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 21:50:03] HOME_URL="https://www.centos.org/"
[2025-04-17 21:50:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 21:50:03] 
[2025-04-17 21:50:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 21:50:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 21:50:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 21:50:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 21:50:03] 
[2025-04-17 21:50:03] 2025-04-18 01:49:43,784 | INFO     | **************************************
[2025-04-17 21:50:03] 2025-04-18 01:49:44,287 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-17 21:50:03] 2025-04-18 01:49:44,442 | INFO     | sufficient remaining disk space (57057214464 B)
[2025-04-17 21:50:03] 2025-04-18 01:49:44,443 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 21:50:03] 2025-04-18 01:49:44,443 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 21:50:03] 2025-04-18 01:49:44,443 | INFO     | update_server=False
[2025-04-17 21:50:03] 2025-04-18 01:49:44,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 21:50:03] 2025-04-18 01:49:44,443 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 21:50:03] 2025-04-18 01:49:44,444 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 21:50:03] 2025-04-18 01:49:44,444 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 21:50:03] 2025-04-18 01:49:44,444 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 21:50:03] 2025-04-18 01:49:44,527 | INFO     | all data control threads have been joined
[2025-04-17 21:50:03] 2025-04-18 01:49:44,766 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 21:50:03] 2025-04-18 01:49:44,904 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 21:50:03] 2025-04-18 01:49:44,905 | INFO     | aborting loop
[2025-04-17 21:50:03] 2025-04-18 01:49:44,912 | INFO     | all payload control threads have been joined
[2025-04-17 21:50:03] 2025-04-18 01:49:45,069 | INFO     | all job control threads have been joined
[2025-04-17 21:50:03] 2025-04-18 01:49:45,138 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 21:50:03] 2025-04-18 01:49:45,459 | INFO     | [job] retrieve thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:45,540 | INFO     | [data] control thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:45,780 | INFO     | [job] queue monitor thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:45,911 | INFO     | [job] job monitor thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:45,924 | INFO     | [payload] control thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:45,956 | INFO     | [payload] failed_post thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:46,076 | INFO     | [job] control thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:46,363 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:46,473 | INFO     | [payload] validate_post thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:46,529 | INFO     | [job] validate thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:46,616 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:46,624 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:46,632 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:46,640 | INFO     | [data] copytool_in thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:46,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 21:50:03] 2025-04-18 01:49:47,145 | INFO     | [data] copytool_out thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:50,959 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 21:50:03] 2025-04-18 01:49:53,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139769410824000)>', '<ExcThread(monitor, started 139768671221504)>']
[2025-04-17 21:50:03] 2025-04-18 01:49:53,514 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 21:50:03] 2025-04-18 01:49:53,515 | INFO     | [monitor] control thread has ended
[2025-04-17 21:50:03] 2025-04-18 01:49:58,087 | INFO     | all workflow threads have been joined
[2025-04-17 21:50:03] 2025-04-18 01:49:58,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 21:50:03] 2025-04-18 01:49:58,087 | INFO     | traces error code: 0
[2025-04-17 21:50:03] 2025-04-18 01:49:58,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 21:50:03] 2025-04-18 01:50:00,485 [wrapper] ==== pilot stdout END ====
[2025-04-17 21:50:03] 2025-04-18 01:50:00,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 21:50:03] 2025-04-18 01:50:00,663 [wrapper] pilotpid: 28357
[2025-04-17 21:50:03] 2025-04-18 01:50:00,679 [wrapper] Pilot exit status: 0
[2025-04-17 21:50:03] 2025-04-18 01:50:00,835 [wrapper] pandaids: 6605314740
[2025-04-17 21:50:03] 2025-04-18 01:50:01,033 [wrapper] cleanup supervisor_pilot 16081 28358
[2025-04-17 21:50:03] 2025-04-18 01:50:01,061 [wrapper] Test setup, not cleaning
[2025-04-17 21:50:03] 2025-04-18 01:50:01,078 [wrapper] apfmon messages muted
[2025-04-17 21:50:03] 2025-04-18 01:50:01,094 [wrapper] ==== wrapper stdout END ====
[2025-04-17 21:50:03] 2025-04-18 01:50:01,110 [wrapper] ==== wrapper stderr END ====
[2025-04-17 21:50:03]  *** Error codes and diagnostics ***
[2025-04-17 21:50:03]     "exeErrorCode": 0,
[2025-04-17 21:50:03]     "exeErrorDiag": "",
[2025-04-17 21:50:03]     "pilotErrorCode": 0,
[2025-04-17 21:50:03]     "pilotErrorDiag": "",
[2025-04-17 21:50:03]  *** Listing of results directory ***
[2025-04-17 21:50:03] total 424588
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 07:32 pilot3.tar.gz
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 07:38 queuedata.json
[2025-04-17 21:50:03] -rwx------ 1 boincer umatlas     37140 Apr 17 07:39 runpilot2-wrapper.sh
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas       100 Apr 17 10:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 21:50:03] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 10:50 run_atlas
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas       105 Apr 17 10:50 job.xml
[2025-04-17 21:50:03] -rw-r--r-- 2 boincer umatlas 223478008 Apr 17 10:50 EVNT.44075481._002148.pool.root.1
[2025-04-17 21:50:03] -rw-r--r-- 2 boincer umatlas    508890 Apr 17 10:50 input.tar.gz
[2025-04-17 21:50:03] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 10:50 start_atlas.sh
[2025-04-17 21:50:03] drwxrwx--x 2 boincer umatlas      4096 Apr 17 10:50 shared
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas         0 Apr 17 10:50 boinc_lockfile
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas      2578 Apr 17 10:51 pandaJob.out
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas       424 Apr 17 10:51 setup.sh.local
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas    990266 Apr 17 10:54 agis_schedconf.cvmfs.json
[2025-04-17 21:50:03] drwx------ 4 boincer umatlas      4096 Apr 17 10:54 pilot3
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas 200143108 Apr 17 21:44 HITS.44075483._055229.pool.root.1
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas       531 Apr 17 21:44 boinc_task_state.xml
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas      6144 Apr 17 21:47 init_data.xml
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas      1063 Apr 17 21:48 memory_monitor_summary.json
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas   1618536 Apr 17 21:48 agis_ddmendpoints.agis.ALL.json
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas    648868 Apr 17 21:48 log.44075483._055229.job.log.tgz.1
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas        95 Apr 17 21:49 pilot_heartbeat.json
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas      7770 Apr 17 21:49 heartbeat.json
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 21:49 boinc_mmap_file
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas        28 Apr 17 21:49 wrapper_checkpoint.txt
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas      4476 Apr 17 21:49 pilotlog.txt
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas   2994437 Apr 17 21:50 log.44075483._055229.job.log.1
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas       357 Apr 17 21:50 output.list
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas       620 Apr 17 21:50 runtime_log
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas   3665920 Apr 17 21:50 result.tar.gz
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas       664 Apr 17 21:50 WpXKDmhlcP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmGqcLDmd2y3lm.diag
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas     11016 Apr 17 21:50 runtime_log.err
[2025-04-17 21:50:03] -rw-r--r-- 1 boincer umatlas     20904 Apr 17 21:50 stderr.txt
[2025-04-17 21:50:03] HITS file was successfully produced:
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas 200143108 Apr 17 21:44 shared/HITS.pool.root.1
[2025-04-17 21:50:03]  *** Contents of shared directory: ***
[2025-04-17 21:50:03] total 417804
[2025-04-17 21:50:03] -rw-r--r-- 2 boincer umatlas 223478008 Apr 17 10:50 ATLAS.root_0
[2025-04-17 21:50:03] -rw-r--r-- 2 boincer umatlas    508890 Apr 17 10:50 input.tar.gz
[2025-04-17 21:50:03] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 10:50 start_atlas.sh
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas 200143108 Apr 17 21:44 HITS.pool.root.1
[2025-04-17 21:50:03] -rw------- 1 boincer umatlas   3665920 Apr 17 21:50 result.tar.gz
21:50:05 (23065): run_atlas exited; CPU time 57695.242851
21:50:05 (23065): called boinc_finish(0)

</stderr_txt>
]]>

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