Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:11:11 (639882): wrapper (7.7.26015): starting
16:11:11 (639882): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 16:11:11] Arguments: --nthreads 12
[2025-04-17 16:11:11] Threads: 12
[2025-04-17 16:11:11] Checking for CVMFS
[2025-04-17 16:11:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 16:11:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 16:11:11] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 16:11:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 16:11:11] 2.12.6.0 4038419 9333 124300 144971 3 186 2409842 4096001 10675 130560 0 84843557 99.986 2550220 384 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-17 16:11:11] CVMFS is ok
[2025-04-17 16:11:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 16:11:11] Checking for apptainer binary...
[2025-04-17 16:11:11] apptainer is not installed, using version from CVMFS
[2025-04-17 16:11:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 16:11:12] epyc7v12
[2025-04-17 16:11:12] apptainer works
[2025-04-17 16:11:12] Set ATHENA_PROC_NUMBER=12
[2025-04-17 16:11:12] Set ATHENA_CORE_NUMBER=12
[2025-04-17 16:11:12] Starting ATLAS job with PandaID=6604774044
[2025-04-17 16:11:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 18:23:12]  *** The last 200 lines of the pilot log: ***
[2025-04-17 18:23:12] 2025-04-17 18:22:52,428 | INFO     | mean x: 1744910825.0091743
[2025-04-17 18:23:12] 2025-04-17 18:22:52,428 | INFO     | mean y: 2665964.4678899082
[2025-04-17 18:23:12] 2025-04-17 18:22:52,428 | INFO     | -- intersect: -9185737983.69417
[2025-04-17 18:23:12] 2025-04-17 18:22:52,428 | INFO     | intersect: -9185737983.69417
[2025-04-17 18:23:12] 2025-04-17 18:22:52,428 | INFO     | chi2: 0.002327128984365641
[2025-04-17 18:23:12] 2025-04-17 18:22:52,428 | INFO     | current chi2=0.002327128984365641 (change=38.84763668425479 %)
[2025-04-17 18:23:12] 2025-04-17 18:22:52,428 | INFO     | sum of square deviations: 348770611.9903839
[2025-04-17 18:23:12] 2025-04-17 18:22:52,429 | INFO     | sum of deviations: 1357776461.4423077
[2025-04-17 18:23:12] 2025-04-17 18:22:52,429 | INFO     | mean x: 1744910977.5096154
[2025-04-17 18:23:12] 2025-04-17 18:22:52,429 | INFO     | mean y: 2668147.5576923075
[2025-04-17 18:23:12] 2025-04-17 18:22:52,429 | INFO     | -- intersect: -6790332670.527765
[2025-04-17 18:23:12] 2025-04-17 18:22:52,429 | INFO     | intersect: -6790332670.527765
[2025-04-17 18:23:12] 2025-04-17 18:22:52,429 | INFO     | chi2: 0.0016061160360574564
[2025-04-17 18:23:12] 2025-04-17 18:22:52,429 | INFO     | current chi2=0.0016061160360574564 (change=30.982938769280455 %)
[2025-04-17 18:23:12] 2025-04-17 18:22:52,429 | INFO     | sum of square deviations: 300843826.98989975
[2025-04-17 18:23:12] 2025-04-17 18:22:52,430 | INFO     | sum of deviations: 787879463.020202
[2025-04-17 18:23:12] 2025-04-17 18:22:52,430 | INFO     | mean x: 1744911130.010101
[2025-04-17 18:23:12] 2025-04-17 18:22:52,430 | INFO     | mean y: 2669961.97979798
[2025-04-17 18:23:12] 2025-04-17 18:22:52,430 | INFO     | -- intersect: -4567075270.573995
[2025-04-17 18:23:12] 2025-04-17 18:22:52,430 | INFO     | intersect: -4567075270.573995
[2025-04-17 18:23:12] 2025-04-17 18:22:52,430 | INFO     | chi2: 0.0011008653021196478
[2025-04-17 18:23:12] 2025-04-17 18:22:52,430 | INFO     | current chi2=0.0011008653021196478 (change=31.457922254362824 %)
[2025-04-17 18:23:12] 2025-04-17 18:22:52,430 | INFO     | sum of square deviations: 257521779.48936144
[2025-04-17 18:23:12] 2025-04-17 18:22:52,431 | INFO     | sum of deviations: 312731255.5319149
[2025-04-17 18:23:12] 2025-04-17 18:22:52,431 | INFO     | mean x: 1744911282.5106382
[2025-04-17 18:23:12] 2025-04-17 18:22:52,431 | INFO     | mean y: 2671631.9680851065
[2025-04-17 18:23:12] 2025-04-17 18:22:52,431 | INFO     | -- intersect: -2116326991.1906943
[2025-04-17 18:23:12] 2025-04-17 18:22:52,431 | INFO     | intersect: -2116326991.1906943
[2025-04-17 18:23:12] 2025-04-17 18:22:52,431 | INFO     | chi2: 0.0005987110661892697
[2025-04-17 18:23:12] 2025-04-17 18:22:52,431 | INFO     | current chi2=0.0005987110661892697 (change=45.61450296993749 %)
[2025-04-17 18:23:12] 2025-04-17 18:22:52,431 | INFO     | sum of square deviations: 218571906.98876375
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | sum of deviations: -33533515.842696615
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | mean x: 1744911435.011236
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | mean y: 2672983.842696629
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | -- intersect: 270379003.5969177
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | intersect: 270379003.5969177
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | chi2: 0.00021288341332744034
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | current chi2=0.00021288341332744034 (change=64.44304684688393 %)
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | sum of square deviations: 183761646.9880953
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | sum of deviations: -188477450.20238096
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | mean x: 1744911587.5119047
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | mean y: 2673654.7023809524
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | -- intersect: 1792364225.2496629
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | intersect: 1792364225.2496629
[2025-04-17 18:23:12] 2025-04-17 18:22:52,432 | INFO     | chi2: 7.509716794120351e-05
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | current chi2=7.509716794120351e-05 (change=64.72380503139762 %)
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | left removable region not found
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | sum of square deviations: 576988874.9918702
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | sum of deviations: 73735871462.69917
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | mean x: 1744910032.00813
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | mean y: 2493958.300813008
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | -- intersect: -222987007937.96826
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | intersect: -222987007937.96826
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | chi2: 5.028327309820969
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | -- intersect: -222987007937.96826
[2025-04-17 18:23:12] 2025-04-17 18:22:52,433 | INFO     | current memory leak: 127.79 B/s (using 123 data points, chi2=5.03)
[2025-04-17 18:23:12] 2025-04-17 18:22:52,434 | INFO     | ..............................
[2025-04-17 18:23:12] 2025-04-17 18:22:52,434 | INFO     | . Timing measurements:
[2025-04-17 18:23:12] 2025-04-17 18:22:52,434 | INFO     | . get job = 0 s
[2025-04-17 18:23:12] 2025-04-17 18:22:52,434 | INFO     | . initial setup = 1 s
[2025-04-17 18:23:12] 2025-04-17 18:22:52,434 | INFO     | . payload setup = 6 s
[2025-04-17 18:23:12] 2025-04-17 18:22:52,434 | INFO     | . stage-in = 0 s
[2025-04-17 18:23:12] 2025-04-17 18:22:52,434 | INFO     | . payload execution = 7852 s
[2025-04-17 18:23:12] 2025-04-17 18:22:52,434 | INFO     | . stage-out = 0 s
[2025-04-17 18:23:12] 2025-04-17 18:22:52,434 | INFO     | . log creation = 0 s
[2025-04-17 18:23:12] 2025-04-17 18:22:52,434 | INFO     | ..............................
[2025-04-17 18:23:12] 2025-04-17 18:22:52,489 | INFO     | 
[2025-04-17 18:23:12] 2025-04-17 18:22:52,489 | INFO     | job summary report
[2025-04-17 18:23:12] 2025-04-17 18:22:52,489 | INFO     | --------------------------------------------------
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | PanDA job id: 6604774044
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | task id: 44075483
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | errors: (none)
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | pilot state: finished 
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | transexitcode: 0
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | exeerrorcode: 0
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | exeerrordiag: 
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | exitcode: 0
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | exitmsg: OK
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | cpuconsumptiontime: 46368 s
[2025-04-17 18:23:12] 2025-04-17 18:22:52,490 | INFO     | nevents: 400
[2025-04-17 18:23:12] 2025-04-17 18:22:52,491 | INFO     | neventsw: 0
[2025-04-17 18:23:12] 2025-04-17 18:22:52,491 | INFO     | pid: 713819
[2025-04-17 18:23:12] 2025-04-17 18:22:52,491 | INFO     | pgrp: 713819
[2025-04-17 18:23:12] 2025-04-17 18:22:52,491 | INFO     | corecount: 12
[2025-04-17 18:23:12] 2025-04-17 18:22:52,491 | INFO     | event service: False
[2025-04-17 18:23:12] 2025-04-17 18:22:52,491 | INFO     | sizes: {0: 2426620, 1: 2426875, 6: 2427081, 11: 2427109, 7863: 2454769, 7865: 2463756, 7868: 2463940, 7874: 2464110}
[2025-04-17 18:23:12] 2025-04-17 18:22:52,491 | INFO     | --------------------------------------------------
[2025-04-17 18:23:12] 2025-04-17 18:22:52,491 | INFO     | 
[2025-04-17 18:23:12] 2025-04-17 18:22:52,491 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/8
[2025-04-17 18:23:12] 2025-04-17 18:22:52,513 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,514 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,514 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,514 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,514 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,514 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,514 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,515 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,515 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 18:23:12] 2025-04-17 18:22:52,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 18:23:12] 2025-04-17 18:22:52,516 | INFO     | job 6604774044 has completed (purged errors)
[2025-04-17 18:23:12] 2025-04-17 18:22:52,516 | INFO     | overall cleanup function is called
[2025-04-17 18:23:12] 2025-04-17 18:22:53,527 | INFO     | --- collectZombieJob: --- 10, [713819]
[2025-04-17 18:23:12] 2025-04-17 18:22:53,527 | INFO     | zombie collector waiting for pid 713819
[2025-04-17 18:23:12] 2025-04-17 18:22:53,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 18:23:12] 2025-04-17 18:22:53,527 | INFO     | collected zombie processes
[2025-04-17 18:23:12] 2025-04-17 18:22:53,527 | INFO     | will attempt to kill all subprocesses of pid=713819
[2025-04-17 18:23:12] 2025-04-17 18:22:53,816 | INFO     | process IDs to be killed: [713819] (in reverse order)
[2025-04-17 18:23:12] 2025-04-17 18:22:53,942 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 18:23:12] 2025-04-17 18:22:53,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 18:23:12] 2025-04-17 18:22:53,954 | INFO     | did not find any defunct processes belonging to 713819
[2025-04-17 18:23:12] 2025-04-17 18:22:53,962 | INFO     | did not find any defunct processes belonging to 713819
[2025-04-17 18:23:12] 2025-04-17 18:22:53,962 | INFO     | ready for new job
[2025-04-17 18:23:12] 2025-04-17 18:22:53,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 18:23:12] 2025-04-17 18:22:53,963 | INFO     | **************************************
[2025-04-17 18:23:12] 2025-04-17 18:22:53,963 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 18:23:12] 2025-04-17 18:22:53,963 | INFO     | **************************************
[2025-04-17 18:23:12] 2025-04-17 18:22:53,963 | INFO     | 
[2025-04-17 18:23:12] 2025-04-17 18:22:53,994 | INFO     | architecture information:
[2025-04-17 18:23:12] 2025-04-17 18:22:53,994 | INFO     | executing command: cat /etc/os-release
[2025-04-17 18:23:12] 2025-04-17 18:22:54,012 | INFO     | cat /etc/os-release:
[2025-04-17 18:23:12] NAME="CentOS Linux"
[2025-04-17 18:23:12] VERSION="7 (Core)"
[2025-04-17 18:23:12] ID="centos"
[2025-04-17 18:23:12] ID_LIKE="rhel fedora"
[2025-04-17 18:23:12] VERSION_ID="7"
[2025-04-17 18:23:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 18:23:12] ANSI_COLOR="0;31"
[2025-04-17 18:23:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 18:23:12] HOME_URL="https://www.centos.org/"
[2025-04-17 18:23:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 18:23:12] 
[2025-04-17 18:23:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 18:23:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 18:23:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 18:23:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 18:23:12] 
[2025-04-17 18:23:12] 2025-04-17 18:22:54,012 | INFO     | **************************************
[2025-04-17 18:23:12] 2025-04-17 18:22:54,515 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/8
[2025-04-17 18:23:12] 2025-04-17 18:22:54,534 | INFO     | sufficient remaining disk space (309900345344 B)
[2025-04-17 18:23:12] 2025-04-17 18:22:54,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 18:23:12] 2025-04-17 18:22:54,535 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 18:23:12] 2025-04-17 18:22:54,535 | INFO     | update_server=False
[2025-04-17 18:23:12] 2025-04-17 18:22:54,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 18:23:12] 2025-04-17 18:22:54,536 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 18:23:12] 2025-04-17 18:22:54,536 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 18:23:12] 2025-04-17 18:22:54,536 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 18:23:12] 2025-04-17 18:22:54,537 | INFO     | aborting loop
[2025-04-17 18:23:12] 2025-04-17 18:22:54,537 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 18:23:12] 2025-04-17 18:22:54,537 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 18:23:12] 2025-04-17 18:22:54,847 | INFO     | all data control threads have been joined
[2025-04-17 18:23:12] 2025-04-17 18:22:54,991 | INFO     | all payload control threads have been joined
[2025-04-17 18:23:12] 2025-04-17 18:22:55,539 | INFO     | [job] retrieve thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:55,542 | INFO     | [job] job monitor thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:55,851 | INFO     | [data] control thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:55,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 18:23:12] 2025-04-17 18:22:55,956 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:55,995 | INFO     | [payload] control thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:56,027 | INFO     | all job control threads have been joined
[2025-04-17 18:23:12] 2025-04-17 18:22:56,055 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:56,211 | INFO     | [job] validate thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:56,539 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:56,551 | INFO     | [payload] failed_post thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:56,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 18:23:12] 2025-04-17 18:22:56,735 | INFO     | [data] copytool_in thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:56,915 | INFO     | [payload] validate_post thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:57,031 | INFO     | [job] control thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:57,495 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 18:23:12] 2025-04-17 18:22:57,919 | INFO     | [data] copytool_out thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:22:58,500 | INFO     | [job] queue monitor thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:23:00,705 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:23:04,695 | INFO     | job.realtimelogging is not enabled
[2025-04-17 18:23:12] 2025-04-17 18:23:05,699 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 18:23:12] 2025-04-17 18:23:07,421 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256230352704)>', '<ExcThread(monitor, started 140255931897600)>']
[2025-04-17 18:23:12] 2025-04-17 18:23:07,591 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 18:23:12] 2025-04-17 18:23:07,591 | INFO     | [monitor] control thread has ended
[2025-04-17 18:23:12] 2025-04-17 18:23:12,447 | INFO     | all workflow threads have been joined
[2025-04-17 18:23:12] 2025-04-17 18:23:12,447 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 18:23:12] 2025-04-17 18:23:12,447 | INFO     | traces error code: 0
[2025-04-17 18:23:12] 2025-04-17 18:23:12,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 18:23:12] 2025-04-17 18:23:12,538 [wrapper] ==== pilot stdout END ====
[2025-04-17 18:23:12] 2025-04-17 18:23:12,541 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 18:23:12] 2025-04-17 18:23:12,545 [wrapper] pilotpid: 652369
[2025-04-17 18:23:12] 2025-04-17 18:23:12,549 [wrapper] Pilot exit status: 0
[2025-04-17 18:23:12] 2025-04-17 18:23:12,562 [wrapper] pandaids: 6604774044
[2025-04-17 18:23:12] 2025-04-17 18:23:12,636 [wrapper] cleanup supervisor_pilot 1010039 652371
[2025-04-17 18:23:12] 2025-04-17 18:23:12,640 [wrapper] Test setup, not cleaning
[2025-04-17 18:23:12] 2025-04-17 18:23:12,643 [wrapper] apfmon messages muted
[2025-04-17 18:23:12] 2025-04-17 18:23:12,647 [wrapper] ==== wrapper stdout END ====
[2025-04-17 18:23:12] 2025-04-17 18:23:12,650 [wrapper] ==== wrapper stderr END ====
[2025-04-17 18:23:12]  *** Error codes and diagnostics ***
[2025-04-17 18:23:12]     "exeErrorCode": 0,
[2025-04-17 18:23:12]     "exeErrorDiag": "",
[2025-04-17 18:23:12]     "pilotErrorCode": 0,
[2025-04-17 18:23:12]     "pilotErrorDiag": "",
[2025-04-17 18:23:12]  *** Listing of results directory ***
[2025-04-17 18:23:12] total 415948
[2025-04-17 18:23:12] -rw-r--r-- 1 boinc boinc    495897 Apr 17 01:02 pilot3.tar.gz
[2025-04-17 18:23:12] -rw-r--r-- 1 boinc boinc      5111 Apr 17 01:26 queuedata.json
[2025-04-17 18:23:12] -rwx------ 1 boinc boinc     37140 Apr 17 01:27 runpilot2-wrapper.sh
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc       100 Apr 17 16:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 18:23:12] -rwxr-xr-x 1 boinc boinc      7986 Apr 17 16:11 run_atlas
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc       105 Apr 17 16:11 job.xml
[2025-04-17 18:23:12] -rw-r--r-- 2 boinc boinc     17569 Apr 17 16:11 start_atlas.sh
[2025-04-17 18:23:12] drwxrwx--x 2 boinc boinc      4096 Apr 17 16:11 shared
[2025-04-17 18:23:12] -rw-r--r-- 2 boinc boinc    508889 Apr 17 16:11 input.tar.gz
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc      6941 Apr 17 16:11 init_data.xml
[2025-04-17 18:23:12] -rw-r--r-- 2 boinc boinc 225351277 Apr 17 16:11 EVNT.44075481._001894.pool.root.1
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc         0 Apr 17 16:11 boinc_lockfile
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc      2579 Apr 17 16:11 pandaJob.out
[2025-04-17 18:23:12] -rw------- 1 boinc boinc       424 Apr 17 16:11 setup.sh.local
[2025-04-17 18:23:12] -rw------- 1 boinc boinc    990266 Apr 17 16:11 agis_schedconf.cvmfs.json
[2025-04-17 18:23:12] -rw------- 1 boinc boinc   1618536 Apr 17 16:11 agis_ddmendpoints.agis.ALL.json
[2025-04-17 18:23:12] drwx------ 4 boinc boinc      4096 Apr 17 16:11 pilot3
[2025-04-17 18:23:12] -rw------- 1 boinc boinc        95 Apr 17 18:21 pilot_heartbeat.json
[2025-04-17 18:23:12] -rw------- 1 boinc boinc 194481087 Apr 17 18:22 HITS.44075483._048460.pool.root.1
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc       530 Apr 17 18:22 boinc_task_state.xml
[2025-04-17 18:23:12] -rw------- 1 boinc boinc      1023 Apr 17 18:22 memory_monitor_summary.json
[2025-04-17 18:23:12] -rw------- 1 boinc boinc    397272 Apr 17 18:22 log.44075483._048460.job.log.tgz.1
[2025-04-17 18:23:12] -rw------- 1 boinc boinc      7648 Apr 17 18:22 heartbeat.json
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc        27 Apr 17 18:23 wrapper_checkpoint.txt
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc      8192 Apr 17 18:23 boinc_mmap_file
[2025-04-17 18:23:12] -rw------- 1 boinc boinc      4572 Apr 17 18:23 pilotlog.txt
[2025-04-17 18:23:12] -rw------- 1 boinc boinc    718266 Apr 17 18:23 log.44075483._048460.job.log.1
[2025-04-17 18:23:12] -rw------- 1 boinc boinc       357 Apr 17 18:23 output.list
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc       620 Apr 17 18:23 runtime_log
[2025-04-17 18:23:12] -rw------- 1 boinc boinc   1136640 Apr 17 18:23 result.tar.gz
[2025-04-17 18:23:12] -rw------- 1 boinc boinc       651 Apr 17 18:23 tTZKDmNDTP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQfbLDmwBz8Dm.diag
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc     11409 Apr 17 18:23 runtime_log.err
[2025-04-17 18:23:12] -rw-rw-r-- 1 boinc boinc     20679 Apr 17 18:23 stderr.txt
[2025-04-17 18:23:12] HITS file was successfully produced:
[2025-04-17 18:23:12] -rw------- 1 boinc boinc 194481087 Apr 17 18:22 shared/HITS.pool.root.1
[2025-04-17 18:23:12]  *** Contents of shared directory: ***
[2025-04-17 18:23:12] total 411636
[2025-04-17 18:23:12] -rw-r--r-- 2 boinc boinc     17569 Apr 17 16:11 start_atlas.sh
[2025-04-17 18:23:12] -rw-r--r-- 2 boinc boinc    508889 Apr 17 16:11 input.tar.gz
[2025-04-17 18:23:12] -rw-r--r-- 2 boinc boinc 225351277 Apr 17 16:11 ATLAS.root_0
[2025-04-17 18:23:12] -rw------- 1 boinc boinc 194481087 Apr 17 18:22 HITS.pool.root.1
[2025-04-17 18:23:12] -rw------- 1 boinc boinc   1136640 Apr 17 18:23 result.tar.gz
18:23:14 (639882): run_atlas exited; CPU time 46764.091802
18:23:14 (639882): called boinc_finish(0)

</stderr_txt>
]]>

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