Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:16:50 (2218249): wrapper (7.7.26015): starting
10:16:50 (2218249): wrapper: running run_atlas (--nthreads 8)
[2025-04-17 10:16:50] Arguments: --nthreads 8
[2025-04-17 10:16:50] Threads: 8
[2025-04-17 10:16:50] Checking for CVMFS
[2025-04-17 10:16:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 10:16:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 10:16:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 10:16:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 10:16:52] 2.12.6.0 876259 87551 223944 144968 3 19 20565298 32935936 27235 130560 0 116865420 99.740 89788591 23730 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-17 10:16:52] CVMFS is ok
[2025-04-17 10:16:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 10:16:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 10:16:52] Further information can be found at the LHC@home message board.
[2025-04-17 10:16:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 10:16:52] Checking for apptainer binary...
[2025-04-17 10:16:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 10:16:52] Running /usr/bin/apptainer --version
[2025-04-17 10:16:52] apptainer version 1.4.0-1.el9
[2025-04-17 10:16:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 10:16:53] c6-8-25-4.aglt2.org
[2025-04-17 10:16:53] apptainer works
[2025-04-17 10:16:53] Set ATHENA_PROC_NUMBER=8
[2025-04-17 10:16:53] Set ATHENA_CORE_NUMBER=8
[2025-04-17 10:16:53] Starting ATLAS job with PandaID=6605004257
[2025-04-17 10:16:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 16:36:33]  *** The last 200 lines of the pilot log: ***
[2025-04-17 16:36:33] 2025-04-17 20:36:15,350 | INFO     | -- intersect: -33851313916.432655
[2025-04-17 16:36:33] 2025-04-17 20:36:15,350 | INFO     | intersect: -33851313916.432655
[2025-04-17 16:36:33] 2025-04-17 20:36:15,350 | INFO     | chi2: 5.562659709622003
[2025-04-17 16:36:33] 2025-04-17 20:36:15,351 | INFO     | current chi2=5.562659709622003 (change=12.293096496636458 %)
[2025-04-17 16:36:33] 2025-04-17 20:36:15,351 | INFO     | right removable region: 364
[2025-04-17 16:36:33] 2025-04-17 20:36:15,351 | INFO     | sum of square deviations: 15078177367.052155
[2025-04-17 16:36:33] 2025-04-17 20:36:15,359 | INFO     | sum of deviations: 188048561022.07117
[2025-04-17 16:36:33] 2025-04-17 20:36:15,359 | INFO     | mean x: 1744910996.5232878
[2025-04-17 16:36:33] 2025-04-17 20:36:15,359 | INFO     | mean y: 2178075.8739726027
[2025-04-17 16:36:33] 2025-04-17 20:36:15,359 | INFO     | -- intersect: -21759603472.391685
[2025-04-17 16:36:33] 2025-04-17 20:36:15,359 | INFO     | intersect: -21759603472.391685
[2025-04-17 16:36:33] 2025-04-17 20:36:15,364 | INFO     | chi2: 3.604047289198582
[2025-04-17 16:36:33] 2025-04-17 20:36:15,364 | INFO     | current chi2=3.604047289198582 (change=43.17469622157082 %)
[2025-04-17 16:36:33] 2025-04-17 20:36:15,365 | INFO     | sum of square deviations: 14466907650.66381
[2025-04-17 16:36:33] 2025-04-17 20:36:15,372 | INFO     | sum of deviations: 131264141320.7557
[2025-04-17 16:36:33] 2025-04-17 20:36:15,372 | INFO     | mean x: 1744911149.0305555
[2025-04-17 16:36:33] 2025-04-17 20:36:15,372 | INFO     | mean y: 2192234.0222222223
[2025-04-17 16:36:33] 2025-04-17 20:36:15,372 | INFO     | -- intersect: -15830096821.061323
[2025-04-17 16:36:33] 2025-04-17 20:36:15,372 | INFO     | intersect: -15830096821.061323
[2025-04-17 16:36:33] 2025-04-17 20:36:15,373 | INFO     | chi2: 2.562067039143281
[2025-04-17 16:36:33] 2025-04-17 20:36:15,373 | INFO     | current chi2=2.562067039143281 (change=28.911392288834314 %)
[2025-04-17 16:36:33] 2025-04-17 20:36:15,374 | INFO     | sum of square deviations: 13872382434.236626
[2025-04-17 16:36:33] 2025-04-17 20:36:15,381 | INFO     | sum of deviations: 81487486727.75217
[2025-04-17 16:36:33] 2025-04-17 20:36:15,381 | INFO     | mean x: 1744911301.5380282
[2025-04-17 16:36:33] 2025-04-17 20:36:15,381 | INFO     | mean y: 2205005.388732394
[2025-04-17 16:36:33] 2025-04-17 20:36:15,381 | INFO     | -- intersect: -10247543889.52841
[2025-04-17 16:36:33] 2025-04-17 20:36:15,381 | INFO     | intersect: -10247543889.52841
[2025-04-17 16:36:33] 2025-04-17 20:36:15,382 | INFO     | chi2: 1.7597757196900798
[2025-04-17 16:36:33] 2025-04-17 20:36:15,382 | INFO     | current chi2=1.7597757196900798 (change=31.3142204007853 %)
[2025-04-17 16:36:33] 2025-04-17 20:36:15,383 | INFO     | sum of square deviations: 13294369155.268541
[2025-04-17 16:36:33] 2025-04-17 20:36:15,390 | INFO     | sum of deviations: 43062438432.49714
[2025-04-17 16:36:33] 2025-04-17 20:36:15,390 | INFO     | mean x: 1744911454.0457144
[2025-04-17 16:36:33] 2025-04-17 20:36:15,390 | INFO     | mean y: 2215132.0314285713
[2025-04-17 16:36:33] 2025-04-17 20:36:15,390 | INFO     | -- intersect: -5649812518.353524
[2025-04-17 16:36:33] 2025-04-17 20:36:15,390 | INFO     | intersect: -5649812518.353524
[2025-04-17 16:36:33] 2025-04-17 20:36:15,391 | INFO     | chi2: 1.2594692407674974
[2025-04-17 16:36:33] 2025-04-17 20:36:15,391 | INFO     | current chi2=1.2594692407674974 (change=28.430127392068638 %)
[2025-04-17 16:36:33] 2025-04-17 20:36:15,391 | INFO     | sum of square deviations: 12732656845.36232
[2025-04-17 16:36:33] 2025-04-17 20:36:15,398 | INFO     | sum of deviations: 18037199294.69565
[2025-04-17 16:36:33] 2025-04-17 20:36:15,399 | INFO     | mean x: 1744911606.5507247
[2025-04-17 16:36:33] 2025-04-17 20:36:15,399 | INFO     | mean y: 2221907.0173913045
[2025-04-17 16:36:33] 2025-04-17 20:36:15,399 | INFO     | -- intersect: -2469635992.0232687
[2025-04-17 16:36:33] 2025-04-17 20:36:15,399 | INFO     | intersect: -2469635992.0232687
[2025-04-17 16:36:33] 2025-04-17 20:36:15,399 | INFO     | chi2: 1.0197189015625332
[2025-04-17 16:36:33] 2025-04-17 20:36:15,399 | INFO     | current chi2=1.0197189015625332 (change=19.03582330116016 %)
[2025-04-17 16:36:33] 2025-04-17 20:36:15,400 | INFO     | left removable region: 50
[2025-04-17 16:36:33] 2025-04-17 20:36:15,404 | INFO     | sum of square deviations: 9599558313.541315
[2025-04-17 16:36:33] 2025-04-17 20:36:15,407 | INFO     | sum of deviations: 40607575305.280266
[2025-04-17 16:36:33] 2025-04-17 20:36:15,407 | INFO     | mean x: 1744912186.0382166
[2025-04-17 16:36:33] 2025-04-17 20:36:15,407 | INFO     | mean y: 2226062.6433121017
[2025-04-17 16:36:33] 2025-04-17 20:36:15,407 | INFO     | -- intersect: -7379014894.630355
[2025-04-17 16:36:33] 2025-04-17 20:36:15,407 | INFO     | intersect: -7379014894.630355
[2025-04-17 16:36:33] 2025-04-17 20:36:15,412 | INFO     | chi2: 0.12217597988750041
[2025-04-17 16:36:33] 2025-04-17 20:36:15,412 | INFO     | -- intersect: -7379014894.630355
[2025-04-17 16:36:33] 2025-04-17 20:36:15,412 | INFO     | current memory leak: 4.23 B/s (using 314 data points, chi2=0.12)
[2025-04-17 16:36:33] 2025-04-17 20:36:15,413 | INFO     | ..............................
[2025-04-17 16:36:33] 2025-04-17 20:36:15,413 | INFO     | . Timing measurements:
[2025-04-17 16:36:33] 2025-04-17 20:36:15,413 | INFO     | . get job = 0 s
[2025-04-17 16:36:33] 2025-04-17 20:36:15,413 | INFO     | . initial setup = 4 s
[2025-04-17 16:36:33] 2025-04-17 20:36:15,413 | INFO     | . payload setup = 32 s
[2025-04-17 16:36:33] 2025-04-17 20:36:15,413 | INFO     | . stage-in = 0 s
[2025-04-17 16:36:33] 2025-04-17 20:36:15,413 | INFO     | . payload execution = 22567 s
[2025-04-17 16:36:33] 2025-04-17 20:36:15,413 | INFO     | . stage-out = 5 s
[2025-04-17 16:36:33] 2025-04-17 20:36:15,413 | INFO     | . log creation = 1 s
[2025-04-17 16:36:33] 2025-04-17 20:36:15,414 | INFO     | ..............................
[2025-04-17 16:36:33] 2025-04-17 20:36:16,345 | INFO     | 
[2025-04-17 16:36:33] 2025-04-17 20:36:16,345 | INFO     | job summary report
[2025-04-17 16:36:33] 2025-04-17 20:36:16,345 | INFO     | --------------------------------------------------
[2025-04-17 16:36:33] 2025-04-17 20:36:16,345 | INFO     | PanDA job id: 6605004257
[2025-04-17 16:36:33] 2025-04-17 20:36:16,345 | INFO     | task id: 44075483
[2025-04-17 16:36:33] 2025-04-17 20:36:16,345 | INFO     | errors: (none)
[2025-04-17 16:36:33] 2025-04-17 20:36:16,345 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 16:36:33] 2025-04-17 20:36:16,345 | INFO     | pilot state: finished 
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | transexitcode: 0
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | exeerrorcode: 0
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | exeerrordiag: 
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | exitcode: 0
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | exitmsg: OK
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | cpuconsumptiontime: 45423 s
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | nevents: 400
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | neventsw: 0
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | pid: 2232208
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | pgrp: 2232208
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | corecount: 8
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | event service: False
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | sizes: {0: 2426652, 1: 2426851, 12: 2426851, 23: 2426879, 33: 2427113, 34: 2427169, 22603: 2461257, 22609: 2470198, 22611: 2470254, 22644: 2470424}
[2025-04-17 16:36:33] 2025-04-17 20:36:16,346 | INFO     | --------------------------------------------------
[2025-04-17 16:36:33] 2025-04-17 20:36:16,347 | INFO     | 
[2025-04-17 16:36:33] 2025-04-17 20:36:16,347 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 16:36:33] 2025-04-17 20:36:16,464 | INFO     | PID=2224596 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-17 16:36:33] 2025-04-17 20:36:16,464 | INFO     | .. there are 26 such processes running
[2025-04-17 16:36:33] 2025-04-17 20:36:16,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,479 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 16:36:33] 2025-04-17 20:36:16,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 16:36:33] 2025-04-17 20:36:16,480 | INFO     | job 6605004257 has completed (purged errors)
[2025-04-17 16:36:33] 2025-04-17 20:36:16,480 | INFO     | overall cleanup function is called
[2025-04-17 16:36:33] 2025-04-17 20:36:17,494 | INFO     | --- collectZombieJob: --- 10, [2232208]
[2025-04-17 16:36:33] 2025-04-17 20:36:17,494 | INFO     | zombie collector waiting for pid 2232208
[2025-04-17 16:36:33] 2025-04-17 20:36:17,494 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 16:36:33] 2025-04-17 20:36:17,494 | INFO     | collected zombie processes
[2025-04-17 16:36:33] 2025-04-17 20:36:17,494 | INFO     | will attempt to kill all subprocesses of pid=2232208
[2025-04-17 16:36:33] 2025-04-17 20:36:18,366 | INFO     | process IDs to be killed: [2232208] (in reverse order)
[2025-04-17 16:36:33] 2025-04-17 20:36:18,624 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 16:36:33] 2025-04-17 20:36:18,625 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 16:36:33] 2025-04-17 20:36:18,653 | INFO     | did not find any defunct processes belonging to 2232208
[2025-04-17 16:36:33] 2025-04-17 20:36:18,691 | INFO     | did not find any defunct processes belonging to 2232208
[2025-04-17 16:36:33] 2025-04-17 20:36:18,691 | INFO     | ready for new job
[2025-04-17 16:36:33] 2025-04-17 20:36:18,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 16:36:33] 2025-04-17 20:36:18,693 | INFO     | **************************************
[2025-04-17 16:36:33] 2025-04-17 20:36:18,693 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 16:36:33] 2025-04-17 20:36:18,693 | INFO     | **************************************
[2025-04-17 16:36:33] 2025-04-17 20:36:18,694 | INFO     | 
[2025-04-17 16:36:33] 2025-04-17 20:36:18,717 | INFO     | architecture information:
[2025-04-17 16:36:33] 2025-04-17 20:36:18,721 | INFO     | executing command: cat /etc/os-release
[2025-04-17 16:36:33] 2025-04-17 20:36:18,805 | INFO     | cat /etc/os-release:
[2025-04-17 16:36:33] NAME="CentOS Linux"
[2025-04-17 16:36:33] VERSION="7 (Core)"
[2025-04-17 16:36:33] ID="centos"
[2025-04-17 16:36:33] ID_LIKE="rhel fedora"
[2025-04-17 16:36:33] VERSION_ID="7"
[2025-04-17 16:36:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 16:36:33] ANSI_COLOR="0;31"
[2025-04-17 16:36:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 16:36:33] HOME_URL="https://www.centos.org/"
[2025-04-17 16:36:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 16:36:33] 
[2025-04-17 16:36:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 16:36:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 16:36:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 16:36:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 16:36:33] 
[2025-04-17 16:36:33] 2025-04-17 20:36:18,805 | INFO     | **************************************
[2025-04-17 16:36:33] 2025-04-17 20:36:19,309 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 16:36:33] 2025-04-17 20:36:19,334 | INFO     | sufficient remaining disk space (73669804032 B)
[2025-04-17 16:36:33] 2025-04-17 20:36:19,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 16:36:33] 2025-04-17 20:36:19,335 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 16:36:33] 2025-04-17 20:36:19,335 | INFO     | update_server=False
[2025-04-17 16:36:33] 2025-04-17 20:36:19,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 16:36:33] 2025-04-17 20:36:19,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 16:36:33] 2025-04-17 20:36:19,336 | INFO     | aborting loop
[2025-04-17 16:36:33] 2025-04-17 20:36:19,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 16:36:33] 2025-04-17 20:36:19,356 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 16:36:33] 2025-04-17 20:36:19,356 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 16:36:33] 2025-04-17 20:36:19,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 16:36:33] 2025-04-17 20:36:19,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 16:36:33] 2025-04-17 20:36:19,400 | INFO     | all job control threads have been joined
[2025-04-17 16:36:33] 2025-04-17 20:36:19,691 | INFO     | all data control threads have been joined
[2025-04-17 16:36:33] 2025-04-17 20:36:20,341 | INFO     | [job] retrieve thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:20,342 | INFO     | [job] job monitor thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:20,406 | INFO     | [job] control thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:20,475 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:20,475 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:20,550 | INFO     | [job] validate thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:20,621 | INFO     | all payload control threads have been joined
[2025-04-17 16:36:33] 2025-04-17 20:36:20,699 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:20,699 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:20,700 | INFO     | [data] control thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:20,871 | INFO     | [payload] failed_post thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:20,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 16:36:33] 2025-04-17 20:36:21,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 16:36:33] 2025-04-17 20:36:21,347 | INFO     | [data] copytool_out thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:21,531 | INFO     | [data] copytool_in thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:21,637 | INFO     | [payload] control thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:21,771 | INFO     | [payload] validate_post thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:22,174 | INFO     | [job] queue monitor thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:24,898 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 16:36:33] 2025-04-17 20:36:26,057 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140563985340224)>', '<ExcThread(monitor, started 140563265349376)>']
[2025-04-17 16:36:33] 2025-04-17 20:36:26,398 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 16:36:33] 2025-04-17 20:36:26,402 | INFO     | [monitor] control thread has ended
[2025-04-17 16:36:33] 2025-04-17 20:36:31,083 | INFO     | all workflow threads have been joined
[2025-04-17 16:36:33] 2025-04-17 20:36:31,083 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 16:36:33] 2025-04-17 20:36:31,083 | INFO     | traces error code: 0
[2025-04-17 16:36:33] 2025-04-17 20:36:31,083 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 16:36:33] 2025-04-17 20:36:31,768 [wrapper] ==== pilot stdout END ====
[2025-04-17 16:36:33] 2025-04-17 20:36:31,850 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 16:36:33] 2025-04-17 20:36:31,886 [wrapper] pilotpid: 2224596
[2025-04-17 16:36:33] 2025-04-17 20:36:31,901 [wrapper] Pilot exit status: 0
[2025-04-17 16:36:33] 2025-04-17 20:36:32,001 [wrapper] pandaids: 6605004257
[2025-04-17 16:36:33] 2025-04-17 20:36:32,323 [wrapper] cleanup supervisor_pilot 3646414 2224597
[2025-04-17 16:36:33] 2025-04-17 20:36:32,347 [wrapper] Test setup, not cleaning
[2025-04-17 16:36:33] 2025-04-17 20:36:32,383 [wrapper] apfmon messages muted
[2025-04-17 16:36:33] 2025-04-17 20:36:32,450 [wrapper] ==== wrapper stdout END ====
[2025-04-17 16:36:33] 2025-04-17 20:36:32,504 [wrapper] ==== wrapper stderr END ====
[2025-04-17 16:36:33]  *** Error codes and diagnostics ***
[2025-04-17 16:36:33]     "exeErrorCode": 0,
[2025-04-17 16:36:33]     "exeErrorDiag": "",
[2025-04-17 16:36:33]     "pilotErrorCode": 0,
[2025-04-17 16:36:33]     "pilotErrorDiag": "",
[2025-04-17 16:36:33]  *** Listing of results directory ***
[2025-04-17 16:36:33] total 420260
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas    495897 Apr 17 02:24 pilot3.tar.gz
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas      5111 Apr 17 02:39 queuedata.json
[2025-04-17 16:36:33] -rwx------. 1 boincer umatlas     37140 Apr 17 02:39 runpilot2-wrapper.sh
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas       100 Apr 17 10:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 16:36:33] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 17 10:16 run_atlas
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas       105 Apr 17 10:16 job.xml
[2025-04-17 16:36:33] -rw-r--r--. 2 boincer umatlas 224814722 Apr 17 10:16 EVNT.44075481._002021.pool.root.1
[2025-04-17 16:36:33] -rw-r--r--. 2 boincer umatlas     17569 Apr 17 10:16 start_atlas.sh
[2025-04-17 16:36:33] drwxrwx--x. 2 boincer umatlas      4096 Apr 17 10:16 shared
[2025-04-17 16:36:33] -rw-r--r--. 2 boincer umatlas    508888 Apr 17 10:16 input.tar.gz
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas         0 Apr 17 10:16 boinc_lockfile
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas      2578 Apr 17 10:16 pandaJob.out
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas       467 Apr 17 10:16 setup.sh.local
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas    990266 Apr 17 10:17 agis_schedconf.cvmfs.json
[2025-04-17 16:36:33] drwx------. 4 boincer umatlas      4096 Apr 17 10:17 pilot3
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas      6856 Apr 17 16:30 init_data.xml
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas 197180790 Apr 17 16:34 HITS.44075483._051776.pool.root.1
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas       531 Apr 17 16:34 boinc_task_state.xml
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas        95 Apr 17 16:35 pilot_heartbeat.json
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas      1052 Apr 17 16:35 memory_monitor_summary.json
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas   1618536 Apr 17 16:35 agis_ddmendpoints.agis.ALL.json
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas    458132 Apr 17 16:35 log.44075483._051776.job.log.tgz.1
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas      7745 Apr 17 16:36 heartbeat.json
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas      8192 Apr 17 16:36 boinc_mmap_file
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas        28 Apr 17 16:36 wrapper_checkpoint.txt
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas      4476 Apr 17 16:36 pilotlog.txt
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas   1782122 Apr 17 16:36 log.44075483._051776.job.log.1
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas       357 Apr 17 16:36 output.list
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas       620 Apr 17 16:36 runtime_log
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas   2263040 Apr 17 16:36 result.tar.gz
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas     11424 Apr 17 16:36 runtime_log.err
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas       660 Apr 17 16:36 HMtKDmK5XP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmiGcLDmyNN99m.diag
[2025-04-17 16:36:33] -rw-r--r--. 1 boincer umatlas     21055 Apr 17 16:36 stderr.txt
[2025-04-17 16:36:33] HITS file was successfully produced:
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas 197180790 Apr 17 16:34 shared/HITS.pool.root.1
[2025-04-17 16:36:33]  *** Contents of shared directory: ***
[2025-04-17 16:36:33] total 414848
[2025-04-17 16:36:33] -rw-r--r--. 2 boincer umatlas 224814722 Apr 17 10:16 ATLAS.root_0
[2025-04-17 16:36:33] -rw-r--r--. 2 boincer umatlas     17569 Apr 17 10:16 start_atlas.sh
[2025-04-17 16:36:33] -rw-r--r--. 2 boincer umatlas    508888 Apr 17 10:16 input.tar.gz
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas 197180790 Apr 17 16:34 HITS.pool.root.1
[2025-04-17 16:36:33] -rw-------. 1 boincer umatlas   2263040 Apr 17 16:36 result.tar.gz
16:36:34 (2218249): run_atlas exited; CPU time 46450.343725
16:36:34 (2218249): called boinc_finish(0)

</stderr_txt>
]]>

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