Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:08:46 (6926): wrapper (7.7.26015): starting
10:08:46 (6926): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 10:08:46] Arguments: --nthreads 12
[2025-04-17 10:08:46] Threads: 12
[2025-04-17 10:08:46] Checking for CVMFS
[2025-04-17 10:08:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 10:08:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 10:08:47] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 10:08:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 10:08:47] 2.11.2.0 3124 80343 153240 144967 0 55 17956712 20275201 1 130560 0 22248309 99.969 7199523 47295 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 10:08:47] CVMFS is ok
[2025-04-17 10:08:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 10:08:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 10:08:47] Further information can be found at the LHC@home message board.
[2025-04-17 10:08:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 10:08:47] Checking for apptainer binary...
[2025-04-17 10:08:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 10:08:47] Running /usr/bin/apptainer --version
[2025-04-17 10:08:47] apptainer version 1.3.2-1.el7
[2025-04-17 10:08:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 10:08:48] c-205-29.aglt2.org
[2025-04-17 10:08:48] apptainer works
[2025-04-17 10:08:48] Set ATHENA_PROC_NUMBER=12
[2025-04-17 10:08:48] Set ATHENA_CORE_NUMBER=12
[2025-04-17 10:08:48] Starting ATLAS job with PandaID=6604906266
[2025-04-17 10:08:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 11:30:45]  *** The last 200 lines of the pilot log: ***
[2025-04-17 11:30:45]  lfn=log.44075483._049853.job.log.tgz.1
[2025-04-17 11:30:45]  mtime=0
[2025-04-17 11:30:45]  protocol_id=None
[2025-04-17 11:30:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-17 11:30:45]  replicas=None
[2025-04-17 11:30:45]  scope=mc23_13p6TeV
[2025-04-17 11:30:45]  status=None
[2025-04-17 11:30:45]  status_code=0
[2025-04-17 11:30:45]  storage_token=
[2025-04-17 11:30:45]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6604906266/log.44075483._049853.job.log.tgz.1
[2025-04-17 11:30:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/e6/log.44075483._049853.job.log.tgz.1
[2025-04-17 11:30:45]  workdir=None
[2025-04-17 11:30:45] ]
[2025-04-17 11:30:45] 2025-04-17 15:30:15,472 | INFO     | transferring file log.44075483._049853.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6604906266/log.44075483._049853.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-17 11:30:45] 2025-04-17 15:30:15,472 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6604906266/log.44075483._049853.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._049853.job
[2025-04-17 11:30:45] 2025-04-17 15:30:15,493 | INFO     | adding to output.list: log.44075483._049853.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/e6/log.44075483._049853.job.log.tg
[2025-04-17 11:30:45] 2025-04-17 15:30:15,494 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-17 11:30:45] 2025-04-17 15:30:15,494 | INFO     | summary of transferred files:
[2025-04-17 11:30:45] 2025-04-17 15:30:15,494 | INFO     |  -- lfn=log.44075483._049853.job.log.tgz.1, status_code=0, status=transferred
[2025-04-17 11:30:45] 2025-04-17 15:30:15,495 | INFO     | stage-out finished correctly
[2025-04-17 11:30:45] 2025-04-17 15:30:16,310 | INFO     | monitor loop #365: job 0:6604906266 is in state 'finished'
[2025-04-17 11:30:45] 2025-04-17 15:30:16,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 11:30:45] 2025-04-17 15:30:18,290 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-17 11:30:45] 2025-04-17 15:30:18,818 | INFO     | monitor loop #366: job 0:6604906266 is in state 'finished'
[2025-04-17 11:30:45] 2025-04-17 15:30:18,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 11:30:45] 2025-04-17 15:30:19,575 | INFO     | PID=10536 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-17 11:30:45] 2025-04-17 15:30:20,735 | INFO     | job 6604906266 has state=finished
[2025-04-17 11:30:45] 2025-04-17 15:30:20,735 | INFO     | preparing for final server update for job 6604906266 in state='finished'
[2025-04-17 11:30:45] 2025-04-17 15:30:20,735 | INFO     | this job has now completed (state=finished)
[2025-04-17 11:30:45] 2025-04-17 15:30:20,736 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-17 11:30:45] 2025-04-17 15:30:20,736 | INFO     | log transfer has been attempted: DONE
[2025-04-17 11:30:45] 2025-04-17 15:30:20,736 | INFO     | job 6604906266 has finished - writing final server update
[2025-04-17 11:30:45] 2025-04-17 15:30:20,736 | INFO     | total number of processed events: 400 (read)
[2025-04-17 11:30:45] 2025-04-17 15:30:20,738 | INFO     | executing command: lscpu
[2025-04-17 11:30:45] 2025-04-17 15:30:20,763 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-17 11:30:45] 2025-04-17 15:30:21,321 | INFO     | monitor loop #367: job 0:6604906266 is in state 'finished'
[2025-04-17 11:30:45] 2025-04-17 15:30:21,321 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 11:30:45] 2025-04-17 15:30:23,824 | INFO     | monitor loop #368: job 0:6604906266 is in state 'finished'
[2025-04-17 11:30:45] 2025-04-17 15:30:23,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 11:30:45] 2025-04-17 15:30:26,118 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-17 11:30:45] 2025-04-17 15:30:26,119 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6604906266/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 11:30:45] 2025-04-17 15:30:26,120 | INFO     | extracted standard info from prmon json
[2025-04-17 11:30:45] 2025-04-17 15:30:26,120 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 11:30:45] 2025-04-17 15:30:26,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 11:30:45] 2025-04-17 15:30:26,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 11:30:45] 2025-04-17 15:30:26,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 11:30:45] 2025-04-17 15:30:26,122 | INFO     | fitting pss+swap vs Time
[2025-04-17 11:30:45] 2025-04-17 15:30:26,122 | INFO     | sum of square deviations: 120605052.0
[2025-04-17 11:30:45] 2025-04-17 15:30:26,123 | INFO     | sum of deviations: 28049062151.0
[2025-04-17 11:30:45] 2025-04-17 15:30:26,123 | INFO     | mean x: 1744901472.0
[2025-04-17 11:30:45] 2025-04-17 15:30:26,123 | INFO     | mean y: 2550489.178082192
[2025-04-17 11:30:45] 2025-04-17 15:30:26,123 | INFO     | -- intersect: -405808392119.5891
[2025-04-17 11:30:45] 2025-04-17 15:30:26,123 | INFO     | intersect: -405808392119.5891
[2025-04-17 11:30:45] 2025-04-17 15:30:26,124 | INFO     | chi2: 2.7029904238529605
[2025-04-17 11:30:45] 2025-04-17 15:30:26,124 | INFO     | -- intersect: -405808392119.5891
[2025-04-17 11:30:45] 2025-04-17 15:30:26,124 | INFO     | current memory leak: 232.57 B/s (using 73 data points, chi2=2.70)
[2025-04-17 11:30:45] 2025-04-17 15:30:26,124 | INFO     | ..............................
[2025-04-17 11:30:45] 2025-04-17 15:30:26,124 | INFO     | . Timing measurements:
[2025-04-17 11:30:45] 2025-04-17 15:30:26,124 | INFO     | . get job = 0 s
[2025-04-17 11:30:45] 2025-04-17 15:30:26,124 | INFO     | . initial setup = 2 s
[2025-04-17 11:30:45] 2025-04-17 15:30:26,125 | INFO     | . payload setup = 7 s
[2025-04-17 11:30:45] 2025-04-17 15:30:26,125 | INFO     | . stage-in = 0 s
[2025-04-17 11:30:45] 2025-04-17 15:30:26,125 | INFO     | . payload execution = 4845 s
[2025-04-17 11:30:45] 2025-04-17 15:30:26,125 | INFO     | . stage-out = 0 s
[2025-04-17 11:30:45] 2025-04-17 15:30:26,125 | INFO     | . log creation = 0 s
[2025-04-17 11:30:45] 2025-04-17 15:30:26,125 | INFO     | ..............................
[2025-04-17 11:30:45] 2025-04-17 15:30:26,428 | INFO     | 
[2025-04-17 11:30:45] 2025-04-17 15:30:26,428 | INFO     | job summary report
[2025-04-17 11:30:45] 2025-04-17 15:30:26,434 | INFO     | --------------------------------------------------
[2025-04-17 11:30:45] 2025-04-17 15:30:26,434 | INFO     | PanDA job id: 6604906266
[2025-04-17 11:30:45] 2025-04-17 15:30:26,435 | INFO     | task id: 44075483
[2025-04-17 11:30:45] 2025-04-17 15:30:26,435 | INFO     | errors: (none)
[2025-04-17 11:30:45] 2025-04-17 15:30:26,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 11:30:45] 2025-04-17 15:30:26,435 | INFO     | pilot state: finished 
[2025-04-17 11:30:45] 2025-04-17 15:30:26,435 | INFO     | transexitcode: 0
[2025-04-17 11:30:45] 2025-04-17 15:30:26,435 | INFO     | exeerrorcode: 0
[2025-04-17 11:30:45] 2025-04-17 15:30:26,436 | INFO     | exeerrordiag: 
[2025-04-17 11:30:45] 2025-04-17 15:30:26,436 | INFO     | exitcode: 0
[2025-04-17 11:30:45] 2025-04-17 15:30:26,436 | INFO     | exitmsg: OK
[2025-04-17 11:30:45] 2025-04-17 15:30:26,436 | INFO     | cpuconsumptiontime: 45560 s
[2025-04-17 11:30:45] 2025-04-17 15:30:26,436 | INFO     | nevents: 400
[2025-04-17 11:30:45] 2025-04-17 15:30:26,436 | INFO     | neventsw: 0
[2025-04-17 11:30:45] 2025-04-17 15:30:26,436 | INFO     | pid: 16952
[2025-04-17 11:30:45] 2025-04-17 15:30:26,437 | INFO     | pgrp: 16952
[2025-04-17 11:30:45] 2025-04-17 15:30:26,437 | INFO     | corecount: 12
[2025-04-17 11:30:45] 2025-04-17 15:30:26,437 | INFO     | event service: False
[2025-04-17 11:30:45] 2025-04-17 15:30:26,437 | INFO     | sizes: {0: 2426824, 5: 2427030, 11: 2427086, 4856: 2453207, 4857: 2462148, 4860: 2462204, 4868: 2462502}
[2025-04-17 11:30:45] 2025-04-17 15:30:26,437 | INFO     | --------------------------------------------------
[2025-04-17 11:30:45] 2025-04-17 15:30:26,437 | INFO     | 
[2025-04-17 11:30:45] 2025-04-17 15:30:26,438 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 11:30:45] 2025-04-17 15:30:26,461 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,462 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,462 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,462 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,462 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,462 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,463 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,463 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,463 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,463 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,463 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,463 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,464 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,464 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,464 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,464 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,464 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,464 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 11:30:45] 2025-04-17 15:30:26,465 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,465 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 11:30:45] 2025-04-17 15:30:26,465 | INFO     | job 6604906266 has completed (purged errors)
[2025-04-17 11:30:45] 2025-04-17 15:30:26,465 | INFO     | overall cleanup function is called
[2025-04-17 11:30:45] 2025-04-17 15:30:27,474 | INFO     | --- collectZombieJob: --- 10, [16952]
[2025-04-17 11:30:45] 2025-04-17 15:30:27,474 | INFO     | zombie collector waiting for pid 16952
[2025-04-17 11:30:45] 2025-04-17 15:30:27,474 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 11:30:45] 2025-04-17 15:30:27,475 | INFO     | collected zombie processes
[2025-04-17 11:30:45] 2025-04-17 15:30:27,475 | INFO     | will attempt to kill all subprocesses of pid=16952
[2025-04-17 11:30:45] 2025-04-17 15:30:27,569 | INFO     | process IDs to be killed: [16952] (in reverse order)
[2025-04-17 11:30:45] 2025-04-17 15:30:27,622 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 11:30:45] 2025-04-17 15:30:27,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 11:30:45] 2025-04-17 15:30:27,625 | INFO     | did not find any defunct processes belonging to 16952
[2025-04-17 11:30:45] 2025-04-17 15:30:27,628 | INFO     | did not find any defunct processes belonging to 16952
[2025-04-17 11:30:45] 2025-04-17 15:30:27,629 | INFO     | ready for new job
[2025-04-17 11:30:45] 2025-04-17 15:30:27,629 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 11:30:45] 2025-04-17 15:30:27,630 | INFO     | **************************************
[2025-04-17 11:30:45] 2025-04-17 15:30:27,630 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 11:30:45] 2025-04-17 15:30:27,630 | INFO     | **************************************
[2025-04-17 11:30:45] 2025-04-17 15:30:27,631 | INFO     | 
[2025-04-17 11:30:45] 2025-04-17 15:30:27,631 | INFO     | architecture information:
[2025-04-17 11:30:45] 2025-04-17 15:30:27,632 | INFO     | executing command: cat /etc/os-release
[2025-04-17 11:30:45] 2025-04-17 15:30:27,646 | INFO     | cat /etc/os-release:
[2025-04-17 11:30:45] NAME="CentOS Linux"
[2025-04-17 11:30:45] VERSION="7 (Core)"
[2025-04-17 11:30:45] ID="centos"
[2025-04-17 11:30:45] ID_LIKE="rhel fedora"
[2025-04-17 11:30:45] VERSION_ID="7"
[2025-04-17 11:30:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 11:30:45] ANSI_COLOR="0;31"
[2025-04-17 11:30:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 11:30:45] HOME_URL="https://www.centos.org/"
[2025-04-17 11:30:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 11:30:45] 
[2025-04-17 11:30:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 11:30:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 11:30:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 11:30:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 11:30:45] 
[2025-04-17 11:30:45] 2025-04-17 15:30:27,646 | INFO     | **************************************
[2025-04-17 11:30:45] 2025-04-17 15:30:28,149 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 11:30:45] 2025-04-17 15:30:28,165 | INFO     | sufficient remaining disk space (29396828160 B)
[2025-04-17 11:30:45] 2025-04-17 15:30:28,165 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 11:30:45] 2025-04-17 15:30:28,166 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 11:30:45] 2025-04-17 15:30:28,166 | INFO     | update_server=False
[2025-04-17 11:30:45] 2025-04-17 15:30:28,166 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 11:30:45] 2025-04-17 15:30:28,166 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 11:30:45] 2025-04-17 15:30:28,167 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 11:30:45] 2025-04-17 15:30:28,167 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 11:30:45] 2025-04-17 15:30:28,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 11:30:45] 2025-04-17 15:30:28,168 | INFO     | aborting loop
[2025-04-17 11:30:45] 2025-04-17 15:30:28,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 11:30:45] 2025-04-17 15:30:28,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 11:30:45] 2025-04-17 15:30:28,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 11:30:45] 2025-04-17 15:30:28,736 | INFO     | all job control threads have been joined
[2025-04-17 11:30:45] 2025-04-17 15:30:28,882 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 11:30:45] 2025-04-17 15:30:29,008 | INFO     | all data control threads have been joined
[2025-04-17 11:30:45] 2025-04-17 15:30:29,078 | INFO     | all payload control threads have been joined
[2025-04-17 11:30:45] 2025-04-17 15:30:29,169 | INFO     | [job] retrieve thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:29,169 | INFO     | [job] queue monitor thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:29,173 | INFO     | [job] job monitor thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:29,433 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:29,528 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:29,540 | INFO     | [payload] validate_post thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:29,741 | INFO     | [job] control thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:29,954 | INFO     | [data] copytool_in thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:29,968 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:30,013 | INFO     | [data] control thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:30,084 | INFO     | [payload] control thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:30,516 | INFO     | [job] validate thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:30,582 | INFO     | [payload] failed_post thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:30,604 | INFO     | [data] copytool_out thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:32,888 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:38,512 | INFO     | job.realtimelogging is not enabled
[2025-04-17 11:30:45] 2025-04-17 15:30:39,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 11:30:45] 2025-04-17 15:30:40,376 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139942997223232)>', '<ExcThread(monitor, started 139942558680832)>']
[2025-04-17 11:30:45] 2025-04-17 15:30:41,235 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 11:30:45] 2025-04-17 15:30:41,235 | INFO     | [monitor] control thread has ended
[2025-04-17 11:30:45] 2025-04-17 15:30:45,401 | INFO     | all workflow threads have been joined
[2025-04-17 11:30:45] 2025-04-17 15:30:45,402 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 11:30:45] 2025-04-17 15:30:45,402 | INFO     | traces error code: 0
[2025-04-17 11:30:45] 2025-04-17 15:30:45,402 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 11:30:45] 2025-04-17 15:30:45,490 [wrapper] ==== pilot stdout END ====
[2025-04-17 11:30:45] 2025-04-17 15:30:45,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 11:30:45] 2025-04-17 15:30:45,498 [wrapper] pilotpid: 10536
[2025-04-17 11:30:45] 2025-04-17 15:30:45,502 [wrapper] Pilot exit status: 0
[2025-04-17 11:30:45] 2025-04-17 15:30:45,516 [wrapper] pandaids: 6604906266
[2025-04-17 11:30:45] 2025-04-17 15:30:45,558 [wrapper] cleanup supervisor_pilot 28040 10537
[2025-04-17 11:30:45] 2025-04-17 15:30:45,562 [wrapper] Test setup, not cleaning
[2025-04-17 11:30:45] 2025-04-17 15:30:45,566 [wrapper] apfmon messages muted
[2025-04-17 11:30:45] 2025-04-17 15:30:45,570 [wrapper] ==== wrapper stdout END ====
[2025-04-17 11:30:45] 2025-04-17 15:30:45,574 [wrapper] ==== wrapper stderr END ====
[2025-04-17 11:30:45]  *** Error codes and diagnostics ***
[2025-04-17 11:30:45]     "exeErrorCode": 0,
[2025-04-17 11:30:45]     "exeErrorDiag": "",
[2025-04-17 11:30:45]     "pilotErrorCode": 0,
[2025-04-17 11:30:45]     "pilotErrorDiag": "",
[2025-04-17 11:30:45]  *** Listing of results directory ***
[2025-04-17 11:30:45] total 410296
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 23:29 pilot3.tar.gz
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 23:38 queuedata.json
[2025-04-17 11:30:45] -rwx------ 1 boincer umatlas     37140 Apr 16 23:39 runpilot2-wrapper.sh
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas       100 Apr 17 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 11:30:45] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 10:08 run_atlas
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas       105 Apr 17 10:08 job.xml
[2025-04-17 11:30:45] -rw-r--r-- 2 boincer umatlas 223232999 Apr 17 10:08 EVNT.44075481._001946.pool.root.1
[2025-04-17 11:30:45] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 10:08 start_atlas.sh
[2025-04-17 11:30:45] drwxrwx--x 2 boincer umatlas      4096 Apr 17 10:08 shared
[2025-04-17 11:30:45] -rw-r--r-- 2 boincer umatlas    508893 Apr 17 10:08 input.tar.gz
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas         0 Apr 17 10:08 boinc_lockfile
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas      2579 Apr 17 10:08 pandaJob.out
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas       424 Apr 17 10:08 setup.sh.local
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas    990266 Apr 17 10:08 agis_schedconf.cvmfs.json
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas   1618536 Apr 17 10:09 agis_ddmendpoints.agis.ALL.json
[2025-04-17 11:30:45] drwx------ 4 boincer umatlas      4096 Apr 17 10:09 pilot3
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas 191374450 Apr 17 11:29 HITS.44075483._049853.pool.root.1
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas        95 Apr 17 11:30 pilot_heartbeat.json
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas       529 Apr 17 11:30 boinc_task_state.xml
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas      1063 Apr 17 11:30 memory_monitor_summary.json
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas      5867 Apr 17 11:30 init_data.xml
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas    371275 Apr 17 11:30 log.44075483._049853.job.log.tgz.1
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas      7753 Apr 17 11:30 heartbeat.json
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 11:30 boinc_mmap_file
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas        27 Apr 17 11:30 wrapper_checkpoint.txt
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas      4548 Apr 17 11:30 pilotlog.txt
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas    465038 Apr 17 11:30 log.44075483._049853.job.log.1
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas       357 Apr 17 11:30 output.list
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas       620 Apr 17 11:30 runtime_log
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas    860160 Apr 17 11:30 result.tar.gz
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas       658 Apr 17 11:30 zqfMDmZHVP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmLvbLDm0bSeKo.diag
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas     11015 Apr 17 11:30 runtime_log.err
[2025-04-17 11:30:45] -rw-r--r-- 1 boincer umatlas     21656 Apr 17 11:30 stderr.txt
[2025-04-17 11:30:45] HITS file was successfully produced:
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas 191374450 Apr 17 11:29 shared/HITS.pool.root.1
[2025-04-17 11:30:45]  *** Contents of shared directory: ***
[2025-04-17 11:30:45] total 406256
[2025-04-17 11:30:45] -rw-r--r-- 2 boincer umatlas 223232999 Apr 17 10:08 ATLAS.root_0
[2025-04-17 11:30:45] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 10:08 start_atlas.sh
[2025-04-17 11:30:45] -rw-r--r-- 2 boincer umatlas    508893 Apr 17 10:08 input.tar.gz
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas 191374450 Apr 17 11:29 HITS.pool.root.1
[2025-04-17 11:30:45] -rw------- 1 boincer umatlas    860160 Apr 17 11:30 result.tar.gz
11:30:47 (6926): run_atlas exited; CPU time 45547.402774
11:30:47 (6926): called boinc_finish(0)

</stderr_txt>
]]>

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