Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
16:12:41 (789263): wrapper (7.7.26015): starting
16:12:41 (789263): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 16:12:41] Arguments: --nthreads 12
[2025-04-17 16:12:41] Threads: 12
[2025-04-17 16:12:41] Checking for CVMFS
[2025-04-17 16:12:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 16:12:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 16:12:41] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 16:12:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 16:12:41] 2.12.6.0 4038419 9334 124864 144971 2 186 2409842 4096001 12376 130560 0 85189440 99.986 2550220 384 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-17 16:12:41] CVMFS is ok
[2025-04-17 16:12:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 16:12:41] Checking for apptainer binary...
[2025-04-17 16:12:41] apptainer is not installed, using version from CVMFS
[2025-04-17 16:12:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 16:12:41] epyc7v12
[2025-04-17 16:12:41] apptainer works
[2025-04-17 16:12:41] Set ATHENA_PROC_NUMBER=12
[2025-04-17 16:12:41] Set ATHENA_CORE_NUMBER=12
[2025-04-17 16:12:42] Starting ATLAS job with PandaID=6604830339
[2025-04-17 16:12:42] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 18:22:26]  *** The last 200 lines of the pilot log: ***
[2025-04-17 18:22:26] 2025-04-17 18:22:11,646 | INFO     | sum of square deviations: 496597218.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,647 | INFO     | sum of deviations: 11051265507.000002
[2025-04-17 18:22:26] 2025-04-17 18:22:11,647 | INFO     | mean x: 1744910550.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,647 | INFO     | mean y: 2634606.5213675215
[2025-04-17 18:22:26] 2025-04-17 18:22:11,647 | INFO     | -- intersect: -38828573211.51237
[2025-04-17 18:22:26] 2025-04-17 18:22:11,647 | INFO     | intersect: -38828573211.51237
[2025-04-17 18:22:26] 2025-04-17 18:22:11,648 | INFO     | chi2: 0.23391423700330066
[2025-04-17 18:22:26] 2025-04-17 18:22:11,648 | INFO     | current chi2=0.23391423700330066 (change=89.18076581715717 %)
[2025-04-17 18:22:26] 2025-04-17 18:22:11,648 | INFO     | sum of square deviations: 435610028.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,648 | INFO     | sum of deviations: 2287918643.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,648 | INFO     | mean x: 1744910702.5
[2025-04-17 18:22:26] 2025-04-17 18:22:11,648 | INFO     | mean y: 2656184.839285714
[2025-04-17 18:22:26] 2025-04-17 18:22:11,648 | INFO     | -- intersect: -9161994465.994621
[2025-04-17 18:22:26] 2025-04-17 18:22:11,648 | INFO     | intersect: -9161994465.994621
[2025-04-17 18:22:26] 2025-04-17 18:22:11,649 | INFO     | chi2: 0.0023986961504618787
[2025-04-17 18:22:26] 2025-04-17 18:22:11,649 | INFO     | current chi2=0.0023986961504618787 (change=98.97454033529904 %)
[2025-04-17 18:22:26] 2025-04-17 18:22:11,649 | INFO     | sum of square deviations: 379832238.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,649 | INFO     | sum of deviations: 1297790249.9999993
[2025-04-17 18:22:26] 2025-04-17 18:22:11,649 | INFO     | mean x: 1744910855.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,649 | INFO     | mean y: 2658878.9813084113
[2025-04-17 18:22:26] 2025-04-17 18:22:11,649 | INFO     | -- intersect: -5959258168.033965
[2025-04-17 18:22:26] 2025-04-17 18:22:11,649 | INFO     | intersect: -5959258168.033965
[2025-04-17 18:22:26] 2025-04-17 18:22:11,649 | INFO     | chi2: 0.0008753764145826595
[2025-04-17 18:22:26] 2025-04-17 18:22:11,649 | INFO     | current chi2=0.0008753764145826595 (change=63.50615669208031 %)
[2025-04-17 18:22:26] 2025-04-17 18:22:11,650 | INFO     | sum of square deviations: 329031285.5
[2025-04-17 18:22:26] 2025-04-17 18:22:11,650 | INFO     | sum of deviations: 756426382.5000001
[2025-04-17 18:22:26] 2025-04-17 18:22:11,650 | INFO     | mean x: 1744911007.5
[2025-04-17 18:22:26] 2025-04-17 18:22:11,650 | INFO     | mean y: 2660498.8725490198
[2025-04-17 18:22:26] 2025-04-17 18:22:11,650 | INFO     | -- intersect: -4008802177.638362
[2025-04-17 18:22:26] 2025-04-17 18:22:11,650 | INFO     | intersect: -4008802177.638362
[2025-04-17 18:22:26] 2025-04-17 18:22:11,650 | INFO     | chi2: 0.00042401886419786775
[2025-04-17 18:22:26] 2025-04-17 18:22:11,650 | INFO     | current chi2=0.00042401886419786775 (change=51.56153888381594 %)
[2025-04-17 18:22:26] 2025-04-17 18:22:11,650 | INFO     | sum of square deviations: 282974608.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | sum of deviations: 428290027.99999994
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | mean x: 1744911160.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | mean y: 2661580.8865979384
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | -- intersect: -2638310536.208489
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | intersect: -2638310536.208489
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | chi2: 0.00023833669378736915
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | current chi2=0.00023833669378736915 (change=43.791016411913766 %)
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | sum of square deviations: 241429643.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | sum of deviations: 258148553.5
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | mean x: 1744911312.5
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | mean y: 2662201.75
[2025-04-17 18:22:26] 2025-04-17 18:22:11,651 | INFO     | -- intersect: -1863083552.2113786
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | intersect: -1863083552.2113786
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | chi2: 0.00018712550197512863
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | current chi2=0.00018712550197512863 (change=21.48691038650067 %)
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | left removable region: 70
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | sum of square deviations: 41117050.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | sum of deviations: 125445646.00000001
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | mean x: 1744912197.0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | mean y: 2662297.745098039
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | -- intersect: -5320959843.579348
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | intersect: -5320959843.579348
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | chi2: 1.5147083797582303e-05
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | -- intersect: -5320959843.579348
[2025-04-17 18:22:26] 2025-04-17 18:22:11,652 | INFO     | current memory leak: 3.05 B/s (using 51 data points, chi2=0.00)
[2025-04-17 18:22:26] 2025-04-17 18:22:11,653 | INFO     | ..............................
[2025-04-17 18:22:26] 2025-04-17 18:22:11,653 | INFO     | . Timing measurements:
[2025-04-17 18:22:26] 2025-04-17 18:22:11,653 | INFO     | . get job = 0 s
[2025-04-17 18:22:26] 2025-04-17 18:22:11,653 | INFO     | . initial setup = 1 s
[2025-04-17 18:22:26] 2025-04-17 18:22:11,653 | INFO     | . payload setup = 6 s
[2025-04-17 18:22:26] 2025-04-17 18:22:11,653 | INFO     | . stage-in = 0 s
[2025-04-17 18:22:26] 2025-04-17 18:22:11,653 | INFO     | . payload execution = 7725 s
[2025-04-17 18:22:26] 2025-04-17 18:22:11,653 | INFO     | . stage-out = 0 s
[2025-04-17 18:22:26] 2025-04-17 18:22:11,653 | INFO     | . log creation = 0 s
[2025-04-17 18:22:26] 2025-04-17 18:22:11,653 | INFO     | ..............................
[2025-04-17 18:22:26] 2025-04-17 18:22:11,715 | INFO     | 
[2025-04-17 18:22:26] 2025-04-17 18:22:11,715 | INFO     | job summary report
[2025-04-17 18:22:26] 2025-04-17 18:22:11,715 | INFO     | --------------------------------------------------
[2025-04-17 18:22:26] 2025-04-17 18:22:11,715 | INFO     | PanDA job id: 6604830339
[2025-04-17 18:22:26] 2025-04-17 18:22:11,715 | INFO     | task id: 44075483
[2025-04-17 18:22:26] 2025-04-17 18:22:11,715 | INFO     | errors: (none)
[2025-04-17 18:22:26] 2025-04-17 18:22:11,715 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | pilot state: finished 
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | transexitcode: 0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | exeerrorcode: 0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | exeerrordiag: 
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | exitcode: 0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | exitmsg: OK
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | cpuconsumptiontime: 45051 s
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | nevents: 400
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | neventsw: 0
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | pid: 832101
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | pgrp: 832101
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | corecount: 12
[2025-04-17 18:22:26] 2025-04-17 18:22:11,716 | INFO     | event service: False
[2025-04-17 18:22:26] 2025-04-17 18:22:11,717 | INFO     | sizes: {0: 2426847, 5: 2427053, 11: 2427109, 7735: 2454741, 7736: 2463728, 7737: 2463784, 7742: 2464082}
[2025-04-17 18:22:26] 2025-04-17 18:22:11,717 | INFO     | --------------------------------------------------
[2025-04-17 18:22:26] 2025-04-17 18:22:11,717 | INFO     | 
[2025-04-17 18:22:26] 2025-04-17 18:22:11,717 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/9
[2025-04-17 18:22:26] 2025-04-17 18:22:11,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,739 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,740 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 18:22:26] 2025-04-17 18:22:11,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 18:22:26] 2025-04-17 18:22:11,741 | INFO     | job 6604830339 has completed (purged errors)
[2025-04-17 18:22:26] 2025-04-17 18:22:11,741 | INFO     | overall cleanup function is called
[2025-04-17 18:22:26] 2025-04-17 18:22:12,747 | INFO     | --- collectZombieJob: --- 10, [832101]
[2025-04-17 18:22:26] 2025-04-17 18:22:12,747 | INFO     | zombie collector waiting for pid 832101
[2025-04-17 18:22:26] 2025-04-17 18:22:12,747 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 18:22:26] 2025-04-17 18:22:12,747 | INFO     | collected zombie processes
[2025-04-17 18:22:26] 2025-04-17 18:22:12,747 | INFO     | will attempt to kill all subprocesses of pid=832101
[2025-04-17 18:22:26] 2025-04-17 18:22:13,062 | INFO     | process IDs to be killed: [832101] (in reverse order)
[2025-04-17 18:22:26] 2025-04-17 18:22:13,230 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 18:22:26] 2025-04-17 18:22:13,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 18:22:26] 2025-04-17 18:22:13,243 | INFO     | did not find any defunct processes belonging to 832101
[2025-04-17 18:22:26] 2025-04-17 18:22:13,252 | INFO     | did not find any defunct processes belonging to 832101
[2025-04-17 18:22:26] 2025-04-17 18:22:13,252 | INFO     | ready for new job
[2025-04-17 18:22:26] 2025-04-17 18:22:13,252 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 18:22:26] 2025-04-17 18:22:13,253 | INFO     | **************************************
[2025-04-17 18:22:26] 2025-04-17 18:22:13,254 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 18:22:26] 2025-04-17 18:22:13,254 | INFO     | **************************************
[2025-04-17 18:22:26] 2025-04-17 18:22:13,254 | INFO     | 
[2025-04-17 18:22:26] 2025-04-17 18:22:13,279 | INFO     | architecture information:
[2025-04-17 18:22:26] 2025-04-17 18:22:13,280 | INFO     | executing command: cat /etc/os-release
[2025-04-17 18:22:26] 2025-04-17 18:22:13,297 | INFO     | cat /etc/os-release:
[2025-04-17 18:22:26] NAME="CentOS Linux"
[2025-04-17 18:22:26] VERSION="7 (Core)"
[2025-04-17 18:22:26] ID="centos"
[2025-04-17 18:22:26] ID_LIKE="rhel fedora"
[2025-04-17 18:22:26] VERSION_ID="7"
[2025-04-17 18:22:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 18:22:26] ANSI_COLOR="0;31"
[2025-04-17 18:22:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 18:22:26] HOME_URL="https://www.centos.org/"
[2025-04-17 18:22:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 18:22:26] 
[2025-04-17 18:22:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 18:22:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 18:22:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 18:22:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 18:22:26] 
[2025-04-17 18:22:26] 2025-04-17 18:22:13,297 | INFO     | **************************************
[2025-04-17 18:22:26] 2025-04-17 18:22:13,800 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/9
[2025-04-17 18:22:26] 2025-04-17 18:22:13,819 | INFO     | sufficient remaining disk space (310162489344 B)
[2025-04-17 18:22:26] 2025-04-17 18:22:13,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 18:22:26] 2025-04-17 18:22:13,820 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 18:22:26] 2025-04-17 18:22:13,820 | INFO     | update_server=False
[2025-04-17 18:22:26] 2025-04-17 18:22:13,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 18:22:26] 2025-04-17 18:22:13,820 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 18:22:26] 2025-04-17 18:22:13,820 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 18:22:26] 2025-04-17 18:22:13,821 | INFO     | aborting loop
[2025-04-17 18:22:26] 2025-04-17 18:22:13,945 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 18:22:26] 2025-04-17 18:22:13,945 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 18:22:26] 2025-04-17 18:22:13,945 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 18:22:26] 2025-04-17 18:22:14,825 | INFO     | [job] retrieve thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:14,826 | INFO     | [job] job monitor thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:14,848 | INFO     | all job control threads have been joined
[2025-04-17 18:22:26] 2025-04-17 18:22:14,914 | INFO     | all data control threads have been joined
[2025-04-17 18:22:26] 2025-04-17 18:22:14,927 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:15,147 | INFO     | all payload control threads have been joined
[2025-04-17 18:22:26] 2025-04-17 18:22:15,226 | INFO     | [payload] validate_post thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:15,461 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:15,503 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:15,548 | INFO     | [payload] failed_post thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:15,731 | INFO     | [data] copytool_in thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:15,823 | INFO     | [data] copytool_out thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:15,854 | INFO     | [job] control thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:15,920 | INFO     | [data] control thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:15,989 | INFO     | [job] validate thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:16,044 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:16,152 | INFO     | [payload] control thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:16,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 18:22:26] 2025-04-17 18:22:16,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 18:22:26] 2025-04-17 18:22:17,728 | INFO     | [job] queue monitor thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:20,863 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 18:22:26] 2025-04-17 18:22:21,687 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140467898238784)>', '<ExcThread(monitor, started 140467610040064)>']
[2025-04-17 18:22:26] 2025-04-17 18:22:21,983 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 18:22:26] 2025-04-17 18:22:21,983 | INFO     | [monitor] control thread has ended
[2025-04-17 18:22:26] 2025-04-17 18:22:26,712 | INFO     | all workflow threads have been joined
[2025-04-17 18:22:26] 2025-04-17 18:22:26,713 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 18:22:26] 2025-04-17 18:22:26,713 | INFO     | traces error code: 0
[2025-04-17 18:22:26] 2025-04-17 18:22:26,713 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 18:22:26] 2025-04-17 18:22:26,792 [wrapper] ==== pilot stdout END ====
[2025-04-17 18:22:26] 2025-04-17 18:22:26,796 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 18:22:26] 2025-04-17 18:22:26,799 [wrapper] pilotpid: 800357
[2025-04-17 18:22:26] 2025-04-17 18:22:26,803 [wrapper] Pilot exit status: 0
[2025-04-17 18:22:26] 2025-04-17 18:22:26,813 [wrapper] pandaids: 6604830339
[2025-04-17 18:22:26] 2025-04-17 18:22:26,889 [wrapper] cleanup supervisor_pilot 1015995 800358
[2025-04-17 18:22:26] 2025-04-17 18:22:26,893 [wrapper] Test setup, not cleaning
[2025-04-17 18:22:26] 2025-04-17 18:22:26,896 [wrapper] apfmon messages muted
[2025-04-17 18:22:26] 2025-04-17 18:22:26,900 [wrapper] ==== wrapper stdout END ====
[2025-04-17 18:22:26] 2025-04-17 18:22:26,904 [wrapper] ==== wrapper stderr END ====
[2025-04-17 18:22:26]  *** Error codes and diagnostics ***
[2025-04-17 18:22:26]     "exeErrorCode": 0,
[2025-04-17 18:22:26]     "exeErrorDiag": "",
[2025-04-17 18:22:26]     "pilotErrorCode": 0,
[2025-04-17 18:22:26]     "pilotErrorDiag": "",
[2025-04-17 18:22:26]  *** Listing of results directory ***
[2025-04-17 18:22:26] total 412300
[2025-04-17 18:22:26] -rw-r--r-- 1 boinc boinc    495897 Apr 17 02:04 pilot3.tar.gz
[2025-04-17 18:22:26] -rwx------ 1 boinc boinc     37140 Apr 17 02:07 runpilot2-wrapper.sh
[2025-04-17 18:22:26] -rw-r--r-- 1 boinc boinc      5111 Apr 17 02:07 queuedata.json
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc       100 Apr 17 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 18:22:26] -rwxr-xr-x 1 boinc boinc      7986 Apr 17 16:12 run_atlas
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc       105 Apr 17 16:12 job.xml
[2025-04-17 18:22:26] -rw-r--r-- 2 boinc boinc     17569 Apr 17 16:12 start_atlas.sh
[2025-04-17 18:22:26] drwxrwx--x 2 boinc boinc      4096 Apr 17 16:12 shared
[2025-04-17 18:22:26] -rw-r--r-- 2 boinc boinc    508888 Apr 17 16:12 input.tar.gz
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc      6941 Apr 17 16:12 init_data.xml
[2025-04-17 18:22:26] -rw-r--r-- 2 boinc boinc 223799823 Apr 17 16:12 EVNT.44075481._001908.pool.root.1
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc         0 Apr 17 16:12 boinc_lockfile
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc      2579 Apr 17 16:12 pandaJob.out
[2025-04-17 18:22:26] -rw------- 1 boinc boinc       424 Apr 17 16:12 setup.sh.local
[2025-04-17 18:22:26] -rw------- 1 boinc boinc    990266 Apr 17 16:12 agis_schedconf.cvmfs.json
[2025-04-17 18:22:26] -rw------- 1 boinc boinc   1618536 Apr 17 16:12 agis_ddmendpoints.agis.ALL.json
[2025-04-17 18:22:26] drwx------ 4 boinc boinc      4096 Apr 17 16:12 pilot3
[2025-04-17 18:22:26] -rw------- 1 boinc boinc 192314046 Apr 17 18:21 HITS.44075483._048841.pool.root.1
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc       530 Apr 17 18:21 boinc_task_state.xml
[2025-04-17 18:22:26] -rw------- 1 boinc boinc        95 Apr 17 18:21 pilot_heartbeat.json
[2025-04-17 18:22:26] -rw------- 1 boinc boinc      1022 Apr 17 18:22 memory_monitor_summary.json
[2025-04-17 18:22:26] -rw------- 1 boinc boinc    402943 Apr 17 18:22 log.44075483._048841.job.log.tgz.1
[2025-04-17 18:22:26] -rw------- 1 boinc boinc      7649 Apr 17 18:22 heartbeat.json
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc      8192 Apr 17 18:22 boinc_mmap_file
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc        27 Apr 17 18:22 wrapper_checkpoint.txt
[2025-04-17 18:22:26] -rw------- 1 boinc boinc      4377 Apr 17 18:22 pilotlog.txt
[2025-04-17 18:22:26] -rw------- 1 boinc boinc    705315 Apr 17 18:22 log.44075483._048841.job.log.1
[2025-04-17 18:22:26] -rw------- 1 boinc boinc       357 Apr 17 18:22 output.list
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc       620 Apr 17 18:22 runtime_log
[2025-04-17 18:22:26] -rw------- 1 boinc boinc   1126400 Apr 17 18:22 result.tar.gz
[2025-04-17 18:22:26] -rw------- 1 boinc boinc       651 Apr 17 18:22 s1aNDmVqTP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmtjbLDmYWayUm.diag
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc     11409 Apr 17 18:22 runtime_log.err
[2025-04-17 18:22:26] -rw-rw-r-- 1 boinc boinc     20524 Apr 17 18:22 stderr.txt
[2025-04-17 18:22:26] HITS file was successfully produced:
[2025-04-17 18:22:27] -rw------- 1 boinc boinc 192314046 Apr 17 18:21 shared/HITS.pool.root.1
[2025-04-17 18:22:27]  *** Contents of shared directory: ***
[2025-04-17 18:22:27] total 407992
[2025-04-17 18:22:27] -rw-r--r-- 2 boinc boinc     17569 Apr 17 16:12 start_atlas.sh
[2025-04-17 18:22:27] -rw-r--r-- 2 boinc boinc    508888 Apr 17 16:12 input.tar.gz
[2025-04-17 18:22:27] -rw-r--r-- 2 boinc boinc 223799823 Apr 17 16:12 ATLAS.root_0
[2025-04-17 18:22:27] -rw------- 1 boinc boinc 192314046 Apr 17 18:21 HITS.pool.root.1
[2025-04-17 18:22:27] -rw------- 1 boinc boinc   1126400 Apr 17 18:22 result.tar.gz
18:22:28 (789263): run_atlas exited; CPU time 45448.614529
18:22:28 (789263): called boinc_finish(0)

</stderr_txt>
]]>

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