Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:46:28 (10426): wrapper (7.7.26015): starting
09:46:28 (10426): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 09:46:28] Arguments: --nthreads 10
[2025-04-17 09:46:28] Threads: 10
[2025-04-17 09:46:28] Checking for CVMFS
[2025-04-17 09:46:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 09:46:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 09:46:31] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 09:46:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 09:46:33] 2.11.2.0 5745 21929 282084 144966 3 351 14253764 18432001 14909 130560 0 87707574 98.809 238666682 35891 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 09:46:33] CVMFS is ok
[2025-04-17 09:46:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 09:46:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 09:46:33] Further information can be found at the LHC@home message board.
[2025-04-17 09:46:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 09:46:33] Checking for apptainer binary...
[2025-04-17 09:46:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 09:46:33] Running /usr/bin/apptainer --version
[2025-04-17 09:46:33] apptainer version 1.3.2-1.el7
[2025-04-17 09:46:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 09:47:11] c-210-20.aglt2.org
[2025-04-17 09:47:11] apptainer works
[2025-04-17 09:47:12] Set ATHENA_PROC_NUMBER=10
[2025-04-17 09:47:12] Set ATHENA_CORE_NUMBER=10
[2025-04-17 09:47:12] Starting ATLAS job with PandaID=6605311615
[2025-04-17 09:47:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:47:35 (22597): wrapper (7.7.26015): starting
15:47:35 (22597): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 15:47:36] Arguments: --nthreads 10
[2025-04-17 15:47:36] Threads: 10
[2025-04-17 15:47:36] This job has been restarted, cleaning up previous attempt
[2025-04-17 15:47:36] Checking for CVMFS
[2025-04-17 15:47:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 15:47:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 15:47:38] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 15:47:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 15:47:40] 2.11.2.0 5745 22290 278624 144976 3 275 13560554 18432001 15109 130560 0 89096720 98.801 240918730 35900 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 15:47:40] CVMFS is ok
[2025-04-17 15:47:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 15:47:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 15:47:40] Further information can be found at the LHC@home message board.
[2025-04-17 15:47:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 15:47:40] Checking for apptainer binary...
[2025-04-17 15:47:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 15:47:40] Running /usr/bin/apptainer --version
[2025-04-17 15:47:40] apptainer version 1.3.2-1.el7
[2025-04-17 15:47:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 15:48:05] c-210-20.aglt2.org
[2025-04-17 15:48:05] apptainer works
[2025-04-17 15:48:05] Set ATHENA_PROC_NUMBER=10
[2025-04-17 15:48:05] Set ATHENA_CORE_NUMBER=10
[2025-04-17 15:48:06] Starting ATLAS job with PandaID=6605311615
[2025-04-17 15:48:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:29:42 (29331): wrapper (7.7.26015): starting
21:29:42 (29331): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 21:29:43] Arguments: --nthreads 10
[2025-04-17 21:29:43] Threads: 10
[2025-04-17 21:29:43] This job has been restarted, cleaning up previous attempt
[2025-04-17 21:29:43] Checking for CVMFS
[2025-04-17 21:29:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 21:29:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 21:29:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 21:29:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 21:29:47] 2.11.2.0 5745 22632 285032 144984 1 451 11992298 18432000 13168 130560 0 90349925 98.805 243691683 35896 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 21:29:47] CVMFS is ok
[2025-04-17 21:29:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 21:29:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 21:29:47] Further information can be found at the LHC@home message board.
[2025-04-17 21:29:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 21:29:47] Checking for apptainer binary...
[2025-04-17 21:29:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 21:29:47] Running /usr/bin/apptainer --version
[2025-04-17 21:29:47] apptainer version 1.3.2-1.el7
[2025-04-17 21:29:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 21:30:06] c-210-20.aglt2.org
[2025-04-17 21:30:06] apptainer works
[2025-04-17 21:30:06] Set ATHENA_PROC_NUMBER=10
[2025-04-17 21:30:06] Set ATHENA_CORE_NUMBER=10
[2025-04-17 21:30:07] Starting ATLAS job with PandaID=6605311615
[2025-04-17 21:30:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 23:04:39]  *** The last 200 lines of the pilot log: ***
[2025-04-18 23:04:39] 2025-04-19 03:04:07,606 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 23:04:39] 2025-04-19 03:04:07,606 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 23:04:39] 2025-04-19 03:04:07,845 | INFO     | fitting pss+swap vs Time
[2025-04-18 23:04:39] 2025-04-19 03:04:07,860 | INFO     | sum of square deviations: 1050724588402.9506
[2025-04-18 23:04:39] 2025-04-19 03:04:08,362 | INFO     | sum of deviations: 1633086265156.6938
[2025-04-18 23:04:39] 2025-04-19 03:04:08,363 | INFO     | mean x: 1744985938.093209
[2025-04-18 23:04:39] 2025-04-19 03:04:08,384 | INFO     | mean y: 2538755.930758988
[2025-04-18 23:04:39] 2025-04-19 03:04:08,384 | INFO     | -- intersect: -2709601608.770338
[2025-04-18 23:04:39] 2025-04-19 03:04:08,385 | INFO     | intersect: -2709601608.770338
[2025-04-18 23:04:39] 2025-04-19 03:04:08,396 | INFO     | chi2: 12.837174673014294
[2025-04-18 23:04:39] 2025-04-19 03:04:08,443 | INFO     | sum of square deviations: 1040266973327.7158
[2025-04-18 23:04:39] 2025-04-19 03:04:09,039 | INFO     | monitor loop #3868: job 0:6605311615 is in state 'finished'
[2025-04-18 23:04:39] 2025-04-19 03:04:09,039 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 23:04:39] 2025-04-19 03:04:09,127 | INFO     | sum of deviations: 2153384615485.908
[2025-04-18 23:04:39] 2025-04-19 03:04:09,127 | INFO     | mean x: 1744985785.5985303
[2025-04-18 23:04:39] 2025-04-19 03:04:09,128 | INFO     | mean y: 2546343.2311289245
[2025-04-18 23:04:39] 2025-04-19 03:04:09,128 | INFO     | -- intersect: -3609627878.6699824
[2025-04-18 23:04:39] 2025-04-19 03:04:09,128 | INFO     | intersect: -3609627878.6699824
[2025-04-18 23:04:39] 2025-04-19 03:04:09,134 | INFO     | chi2: 8.84696365604053
[2025-04-18 23:04:39] 2025-04-19 03:04:09,135 | INFO     | current chi2=8.84696365604053 (change=31.083249380113205 %)
[2025-04-18 23:04:39] 2025-04-19 03:04:09,137 | INFO     | sum of square deviations: 1029878255940.5175
[2025-04-18 23:04:39] 2025-04-19 03:04:09,191 | INFO     | sum of deviations: 2142869905029.4016
[2025-04-18 23:04:39] 2025-04-19 03:04:09,192 | INFO     | mean x: 1744985633.0985255
[2025-04-18 23:04:39] 2025-04-19 03:04:09,192 | INFO     | mean y: 2546188.908847185
[2025-04-18 23:04:39] 2025-04-19 03:04:09,192 | INFO     | -- intersect: -3628249175.7924705
[2025-04-18 23:04:39] 2025-04-19 03:04:09,192 | INFO     | intersect: -3628249175.7924705
[2025-04-18 23:04:39] 2025-04-19 03:04:09,194 | INFO     | chi2: 8.847176871217426
[2025-04-18 23:04:39] 2025-04-19 03:04:09,195 | INFO     | current chi2=8.847176871217426 (change=-0.0024100378975969784 %)
[2025-04-18 23:04:39] 2025-04-19 03:04:09,195 | INFO     | right removable region: 1491
[2025-04-18 23:04:39] 2025-04-19 03:04:09,197 | INFO     | sum of square deviations: 1040265513597.7178
[2025-04-18 23:04:39] 2025-04-19 03:04:09,570 | INFO     | sum of deviations: 1119210846129.7874
[2025-04-18 23:04:39] 2025-04-19 03:04:09,570 | INFO     | mean x: 1744986090.5985303
[2025-04-18 23:04:39] 2025-04-19 03:04:09,570 | INFO     | mean y: 2546247.5404141615
[2025-04-18 23:04:39] 2025-04-19 03:04:09,571 | INFO     | -- intersect: -1874866137.4852998
[2025-04-18 23:04:39] 2025-04-19 03:04:09,571 | INFO     | intersect: -1874866137.4852998
[2025-04-18 23:04:39] 2025-04-19 03:04:09,597 | INFO     | chi2: 8.81926626164041
[2025-04-18 23:04:39] 2025-04-19 03:04:09,598 | INFO     | current chi2=8.81926626164041 (change=31.299008650401422 %)
[2025-04-18 23:04:39] 2025-04-19 03:04:09,647 | INFO     | sum of square deviations: 1029876068004.8975
[2025-04-18 23:04:39] 2025-04-19 03:04:10,370 | INFO     | sum of deviations: 748774545346.5038
[2025-04-18 23:04:39] 2025-04-19 03:04:10,370 | INFO     | mean x: 1744986243.1038873
[2025-04-18 23:04:39] 2025-04-19 03:04:10,370 | INFO     | mean y: 2551684.7064343165
[2025-04-18 23:04:39] 2025-04-19 03:04:10,371 | INFO     | -- intersect: -1266145900.7682908
[2025-04-18 23:04:39] 2025-04-19 03:04:10,371 | INFO     | intersect: -1266145900.7682908
[2025-04-18 23:04:39] 2025-04-19 03:04:10,373 | INFO     | chi2: 6.793662736098577
[2025-04-18 23:04:39] 2025-04-19 03:04:10,373 | INFO     | current chi2=6.793662736098577 (change=22.967937076038165 %)
[2025-04-18 23:04:39] 2025-04-19 03:04:10,373 | INFO     | left removable region: 20
[2025-04-18 23:04:39] 2025-04-19 03:04:10,375 | INFO     | sum of square deviations: 986997989423.9867
[2025-04-18 23:04:39] 2025-04-19 03:04:10,728 | INFO     | sum of deviations: 691576322806.7313
[2025-04-18 23:04:39] 2025-04-19 03:04:10,728 | INFO     | mean x: 1744986212.6159074
[2025-04-18 23:04:39] 2025-04-19 03:04:10,729 | INFO     | mean y: 2567778.5499660093
[2025-04-18 23:04:39] 2025-04-19 03:04:10,729 | INFO     | -- intersect: -1220120779.2794569
[2025-04-18 23:04:39] 2025-04-19 03:04:10,729 | INFO     | intersect: -1220120779.2794569
[2025-04-18 23:04:39] 2025-04-19 03:04:10,737 | INFO     | chi2: 0.24860329290530966
[2025-04-18 23:04:39] 2025-04-19 03:04:10,737 | INFO     | -- intersect: -1220120779.2794569
[2025-04-18 23:04:39] 2025-04-19 03:04:10,738 | INFO     | current memory leak: 0.70 B/s (using 1471 data points, chi2=0.25)
[2025-04-18 23:04:39] 2025-04-19 03:04:10,740 | INFO     | ..............................
[2025-04-18 23:04:39] 2025-04-19 03:04:10,768 | INFO     | . Timing measurements:
[2025-04-18 23:04:39] 2025-04-19 03:04:10,768 | INFO     | . get job = 0 s
[2025-04-18 23:04:39] 2025-04-19 03:04:10,768 | INFO     | . initial setup = 6 s
[2025-04-18 23:04:39] 2025-04-19 03:04:10,768 | INFO     | . payload setup = 76 s
[2025-04-18 23:04:39] 2025-04-19 03:04:10,769 | INFO     | . stage-in = 0 s
[2025-04-18 23:04:39] 2025-04-19 03:04:10,769 | INFO     | . payload execution = 91656 s
[2025-04-18 23:04:39] 2025-04-19 03:04:10,777 | INFO     | . stage-out = 21 s
[2025-04-18 23:04:39] 2025-04-19 03:04:10,777 | INFO     | . log creation = 6 s
[2025-04-18 23:04:39] 2025-04-19 03:04:10,777 | INFO     | ..............................
[2025-04-18 23:04:39] 2025-04-19 03:04:10,979 | INFO     | 
[2025-04-18 23:04:39] 2025-04-19 03:04:10,979 | INFO     | job summary report
[2025-04-18 23:04:39] 2025-04-19 03:04:10,979 | INFO     | --------------------------------------------------
[2025-04-18 23:04:39] 2025-04-19 03:04:10,979 | INFO     | PanDA job id: 6605311615
[2025-04-18 23:04:39] 2025-04-19 03:04:10,980 | INFO     | task id: 44075483
[2025-04-18 23:04:39] 2025-04-19 03:04:10,980 | INFO     | errors: (none)
[2025-04-18 23:04:39] 2025-04-19 03:04:10,980 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 23:04:39] 2025-04-19 03:04:10,980 | INFO     | pilot state: finished 
[2025-04-18 23:04:39] 2025-04-19 03:04:10,980 | INFO     | transexitcode: 0
[2025-04-18 23:04:39] 2025-04-19 03:04:10,980 | INFO     | exeerrorcode: 0
[2025-04-18 23:04:39] 2025-04-19 03:04:10,980 | INFO     | exeerrordiag: 
[2025-04-18 23:04:39] 2025-04-19 03:04:10,980 | INFO     | exitcode: 0
[2025-04-18 23:04:39] 2025-04-19 03:04:10,981 | INFO     | exitmsg: OK
[2025-04-18 23:04:39] 2025-04-19 03:04:10,981 | INFO     | cpuconsumptiontime: 59875 s
[2025-04-18 23:04:39] 2025-04-19 03:04:10,981 | INFO     | nevents: 400
[2025-04-18 23:04:39] 2025-04-19 03:04:10,981 | INFO     | neventsw: 0
[2025-04-18 23:04:39] 2025-04-19 03:04:10,981 | INFO     | pid: 32709
[2025-04-18 23:04:39] 2025-04-19 03:04:10,981 | INFO     | pgrp: 32709
[2025-04-18 23:04:39] 2025-04-19 03:04:10,981 | INFO     | corecount: 10
[2025-04-18 23:04:39] 2025-04-19 03:04:10,981 | INFO     | event service: False
[2025-04-18 23:04:39] 2025-04-19 03:04:10,981 | INFO     | sizes: {0: 2425995, 1: 2426680, 2: 2426879, 13: 2426879, 24: 2426935, 35: 2426963, 41: 2427325, 46: 2427353, 91737: 2487471, 91738: 2487470, 91760: 2496467, 91761:
[2025-04-18 23:04:39] 2025-04-19 03:04:10,981 | INFO     | --------------------------------------------------
[2025-04-18 23:04:39] 2025-04-19 03:04:10,982 | INFO     | 
[2025-04-18 23:04:39] 2025-04-19 03:04:10,982 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-18 23:04:39] 2025-04-19 03:04:11,364 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,385 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,419 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,419 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,419 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,420 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 23:04:39] 2025-04-19 03:04:11,420 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,440 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 23:04:39] 2025-04-19 03:04:11,440 | INFO     | job 6605311615 has completed (purged errors)
[2025-04-18 23:04:39] 2025-04-19 03:04:11,441 | INFO     | overall cleanup function is called
[2025-04-18 23:04:39] 2025-04-19 03:04:12,505 | INFO     | --- collectZombieJob: --- 10, [32709]
[2025-04-18 23:04:39] 2025-04-19 03:04:12,505 | INFO     | zombie collector waiting for pid 32709
[2025-04-18 23:04:39] 2025-04-19 03:04:12,505 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 23:04:39] 2025-04-19 03:04:12,505 | INFO     | collected zombie processes
[2025-04-18 23:04:39] 2025-04-19 03:04:12,506 | INFO     | will attempt to kill all subprocesses of pid=32709
[2025-04-18 23:04:39] 2025-04-19 03:04:18,378 | INFO     | process IDs to be killed: [32709] (in reverse order)
[2025-04-18 23:04:39] 2025-04-19 03:04:20,896 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 23:04:39] 2025-04-19 03:04:20,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 23:04:39] 2025-04-19 03:04:21,668 | INFO     | did not find any defunct processes belonging to 32709
[2025-04-18 23:04:39] 2025-04-19 03:04:21,680 | INFO     | did not find any defunct processes belonging to 32709
[2025-04-18 23:04:39] 2025-04-19 03:04:21,680 | INFO     | ready for new job
[2025-04-18 23:04:39] 2025-04-19 03:04:21,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 23:04:39] 2025-04-19 03:04:21,685 | INFO     | **************************************
[2025-04-18 23:04:39] 2025-04-19 03:04:21,685 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 23:04:39] 2025-04-19 03:04:21,686 | INFO     | **************************************
[2025-04-18 23:04:39] 2025-04-19 03:04:21,686 | INFO     | 
[2025-04-18 23:04:39] 2025-04-19 03:04:21,688 | INFO     | architecture information:
[2025-04-18 23:04:39] 2025-04-19 03:04:21,723 | INFO     | executing command: cat /etc/os-release
[2025-04-18 23:04:39] 2025-04-19 03:04:22,227 | INFO     | cat /etc/os-release:
[2025-04-18 23:04:39] NAME="CentOS Linux"
[2025-04-18 23:04:39] VERSION="7 (Core)"
[2025-04-18 23:04:39] ID="centos"
[2025-04-18 23:04:39] ID_LIKE="rhel fedora"
[2025-04-18 23:04:39] VERSION_ID="7"
[2025-04-18 23:04:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 23:04:39] ANSI_COLOR="0;31"
[2025-04-18 23:04:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 23:04:39] HOME_URL="https://www.centos.org/"
[2025-04-18 23:04:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 23:04:39] 
[2025-04-18 23:04:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 23:04:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 23:04:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 23:04:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 23:04:39] 
[2025-04-18 23:04:39] 2025-04-19 03:04:22,227 | INFO     | **************************************
[2025-04-18 23:04:39] 2025-04-19 03:04:22,243 | INFO     | PID=2953 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-18 23:04:39] 2025-04-19 03:04:22,243 | INFO     | .. there are 42 such processes running
[2025-04-18 23:04:39] 2025-04-19 03:04:22,730 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-18 23:04:39] 2025-04-19 03:04:23,155 | INFO     | sufficient remaining disk space (56946065408 B)
[2025-04-18 23:04:39] 2025-04-19 03:04:23,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 23:04:39] 2025-04-19 03:04:23,156 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 23:04:39] 2025-04-19 03:04:23,156 | INFO     | update_server=False
[2025-04-18 23:04:39] 2025-04-19 03:04:23,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 23:04:39] 2025-04-19 03:04:23,156 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 23:04:39] 2025-04-19 03:04:23,157 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 23:04:39] 2025-04-19 03:04:23,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 23:04:39] 2025-04-19 03:04:23,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 23:04:39] 2025-04-19 03:04:23,157 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 23:04:39] 2025-04-19 03:04:23,157 | INFO     | aborting loop
[2025-04-18 23:04:39] 2025-04-19 03:04:23,617 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 23:04:39] 2025-04-19 03:04:23,705 | INFO     | all job control threads have been joined
[2025-04-18 23:04:39] 2025-04-19 03:04:23,901 | INFO     | all data control threads have been joined
[2025-04-18 23:04:39] 2025-04-19 03:04:24,162 | INFO     | [job] job monitor thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:24,172 | INFO     | [job] retrieve thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:24,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 23:04:39] 2025-04-19 03:04:24,194 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 23:04:39] 2025-04-19 03:04:24,326 | INFO     | all payload control threads have been joined
[2025-04-18 23:04:39] 2025-04-19 03:04:24,711 | INFO     | [job] control thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:24,907 | INFO     | [data] control thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:24,928 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:25,165 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:25,171 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:25,184 | INFO     | [data] copytool_in thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:25,193 | INFO     | [job] validate thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:25,200 | INFO     | [job] queue monitor thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:25,203 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:25,223 | INFO     | [payload] failed_post thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:25,229 | INFO     | [payload] validate_post thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:25,332 | INFO     | [payload] control thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:26,222 | INFO     | [data] copytool_out thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:27,637 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 23:04:39] 2025-04-19 03:04:29,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139972269713216)>', '<ExcThread(monitor, started 139971675535104)>']
[2025-04-18 23:04:39] 2025-04-19 03:04:29,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 23:04:39] 2025-04-19 03:04:29,215 | INFO     | [monitor] control thread has ended
[2025-04-18 23:04:39] 2025-04-19 03:04:34,092 | INFO     | all workflow threads have been joined
[2025-04-18 23:04:39] 2025-04-19 03:04:34,092 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 23:04:39] 2025-04-19 03:04:34,092 | INFO     | traces error code: 0
[2025-04-18 23:04:39] 2025-04-19 03:04:34,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 23:04:39] 2025-04-19 03:04:34,799 [wrapper] ==== pilot stdout END ====
[2025-04-18 23:04:39] 2025-04-19 03:04:34,877 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 23:04:39] 2025-04-19 03:04:34,987 [wrapper] pilotpid: 2953
[2025-04-18 23:04:39] 2025-04-19 03:04:35,029 [wrapper] Pilot exit status: 0
[2025-04-18 23:04:39] 2025-04-19 03:04:35,502 [wrapper] pandaids: 6605311615 6605311615 6605311615
[2025-04-18 23:04:39] 2025-04-19 03:04:36,547 [wrapper] cleanup supervisor_pilot 40947 2954
[2025-04-18 23:04:39] 2025-04-19 03:04:36,642 [wrapper] Test setup, not cleaning
[2025-04-18 23:04:39] 2025-04-19 03:04:36,680 [wrapper] apfmon messages muted
[2025-04-18 23:04:39] 2025-04-19 03:04:36,720 [wrapper] ==== wrapper stdout END ====
[2025-04-18 23:04:39] 2025-04-19 03:04:36,765 [wrapper] ==== wrapper stderr END ====
[2025-04-18 23:04:39]  *** Error codes and diagnostics ***
[2025-04-18 23:04:39]     "exeErrorCode": 0,
[2025-04-18 23:04:39]     "exeErrorDiag": "",
[2025-04-18 23:04:39]     "pilotErrorCode": 0,
[2025-04-18 23:04:39]     "pilotErrorDiag": "",
[2025-04-18 23:04:39]  *** Listing of results directory ***
[2025-04-18 23:04:39] total 642000
[2025-04-18 23:04:39] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 06:13 pilot3.tar.gz
[2025-04-18 23:04:39] -rwx------ 1 boincer umatlas     37140 Apr 17 06:32 runpilot2-wrapper.sh
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 06:32 queuedata.json
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas       100 Apr 17 09:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 23:04:39] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 09:46 run_atlas
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas       105 Apr 17 09:46 job.xml
[2025-04-18 23:04:39] -rw-r--r-- 3 boincer umatlas 222146547 Apr 17 09:46 EVNT.44075481._002117.pool.root.1
[2025-04-18 23:04:39] -rw-r--r-- 3 boincer umatlas 222146547 Apr 17 09:46 ATLAS.root_0
[2025-04-18 23:04:39] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 09:46 start_atlas.sh
[2025-04-18 23:04:39] drwxrwx--x 2 boincer umatlas      4096 Apr 17 09:46 shared
[2025-04-18 23:04:39] -rw-r--r-- 2 boincer umatlas    508893 Apr 17 09:46 input.tar.gz
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas         0 Apr 17 09:46 boinc_lockfile
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas      2578 Apr 17 21:30 pandaJob.out
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas       467 Apr 17 21:30 setup.sh.local
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas    990250 Apr 17 21:31 agis_schedconf.cvmfs.json
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas 195824221 Apr 18 22:56 HITS.44075483._054433.pool.root.1
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas       533 Apr 18 22:57 boinc_task_state.xml
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas      6231 Apr 18 23:01 init_data.xml
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas      1054 Apr 18 23:02 memory_monitor_summary.json
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas   1618536 Apr 18 23:02 agis_ddmendpoints.agis.ALL.json
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas    969031 Apr 18 23:02 log.44075483._054433.job.log.tgz.1
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas        96 Apr 18 23:03 pilot_heartbeat.json
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas      7753 Apr 18 23:04 heartbeat.json
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas      8192 Apr 18 23:04 boinc_mmap_file
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas        30 Apr 18 23:04 wrapper_checkpoint.txt
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas      4868 Apr 18 23:04 pilotlog.txt
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas   5739377 Apr 18 23:04 log.44075483._054433.job.log.1
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas       357 Apr 18 23:04 output.list
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas       620 Apr 18 23:04 runtime_log
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas   6727680 Apr 18 23:04 result.tar.gz
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas       915 Apr 18 23:04 s70MDmWibP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmyr3KDmIgvt5n.diag
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas     11506 Apr 18 23:04 runtime_log.err
[2025-04-18 23:04:39] -rw-r--r-- 1 boincer umatlas     25421 Apr 18 23:04 stderr.txt
[2025-04-18 23:04:39] HITS file was successfully produced:
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas 195824221 Apr 18 22:56 shared/HITS.pool.root.1
[2025-04-18 23:04:39]  *** Contents of shared directory: ***
[2025-04-18 23:04:39] total 415276
[2025-04-18 23:04:39] -rw-r--r-- 3 boincer umatlas 222146547 Apr 17 09:46 ATLAS.root_0
[2025-04-18 23:04:39] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 09:46 start_atlas.sh
[2025-04-18 23:04:39] -rw-r--r-- 2 boincer umatlas    508893 Apr 17 09:46 input.tar.gz
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas 195824221 Apr 18 22:56 HITS.pool.root.1
[2025-04-18 23:04:39] -rw------- 1 boincer umatlas   6727680 Apr 18 23:04 result.tar.gz
23:04:40 (29331): run_atlas exited; CPU time 63061.167039
23:04:40 (29331): called boinc_finish(0)

</stderr_txt>
]]>

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