Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:50:47 (15682): wrapper (7.7.26015): starting
09:50:47 (15682): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 09:50:47] Arguments: --nthreads 10
[2025-04-17 09:50:47] Threads: 10
[2025-04-17 09:50:47] Checking for CVMFS
[2025-04-17 09:50:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 09:50:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 09:50:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 09:50:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 09:50:52] 2.11.2.0 7995 38935 109632 144966 2 61 11930421 18432000 10550 130560 0 75074600 98.318 268030019 40329 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 09:50:52] CVMFS is ok
[2025-04-17 09:50:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 09:50:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 09:50:52] Further information can be found at the LHC@home message board.
[2025-04-17 09:50:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 09:50:52] Checking for apptainer binary...
[2025-04-17 09:50:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 09:50:52] Running /usr/bin/apptainer --version
[2025-04-17 09:50:53] apptainer version 1.3.2-1.el7
[2025-04-17 09:50:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 09:51:33] c-210-11.aglt2.org
[2025-04-17 09:51:33] apptainer works
[2025-04-17 09:51:33] Set ATHENA_PROC_NUMBER=10
[2025-04-17 09:51:33] Set ATHENA_CORE_NUMBER=10
[2025-04-17 09:51:33] Starting ATLAS job with PandaID=6605311585
[2025-04-17 09:51:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 21:53:45]  *** The last 200 lines of the pilot log: ***
[2025-04-17 21:53:45] 2025-04-18 01:53:19,804 | INFO     | chi2: 9.204829918774035
[2025-04-17 21:53:45] 2025-04-18 01:53:19,804 | INFO     | current chi2=9.204829918774035 (change=35.35409898655607 %)
[2025-04-17 21:53:45] 2025-04-18 01:53:19,805 | INFO     | sum of square deviations: 100983306719.0
[2025-04-17 21:53:45] 2025-04-18 01:53:19,817 | INFO     | sum of deviations: 557260749592.7501
[2025-04-17 21:53:45] 2025-04-18 01:53:19,817 | INFO     | mean x: 1744920188.75
[2025-04-17 21:53:45] 2025-04-18 01:53:19,818 | INFO     | mean y: 2538091.597383721
[2025-04-17 21:53:45] 2025-04-18 01:53:19,818 | INFO     | -- intersect: -9626533919.959114
[2025-04-17 21:53:45] 2025-04-18 01:53:19,818 | INFO     | intersect: -9626533919.959114
[2025-04-17 21:53:45] 2025-04-18 01:53:19,819 | INFO     | chi2: 5.994125369704599
[2025-04-17 21:53:45] 2025-04-18 01:53:19,819 | INFO     | current chi2=5.994125369704599 (change=34.880650456353685 %)
[2025-04-17 21:53:45] 2025-04-18 01:53:19,820 | INFO     | sum of square deviations: 98797408068.64534
[2025-04-17 21:53:45] 2025-04-18 01:53:19,832 | INFO     | sum of deviations: 385123886420.21747
[2025-04-17 21:53:45] 2025-04-18 01:53:19,832 | INFO     | mean x: 1744920341.2576866
[2025-04-17 21:53:45] 2025-04-18 01:53:19,833 | INFO     | mean y: 2550098.3396778917
[2025-04-17 21:53:45] 2025-04-18 01:53:19,833 | INFO     | -- intersect: -6799354085.745126
[2025-04-17 21:53:45] 2025-04-18 01:53:19,833 | INFO     | intersect: -6799354085.745126
[2025-04-17 21:53:45] 2025-04-18 01:53:19,834 | INFO     | chi2: 3.863719166003988
[2025-04-17 21:53:45] 2025-04-18 01:53:19,834 | INFO     | current chi2=3.863719166003988 (change=35.541568991333946 %)
[2025-04-17 21:53:45] 2025-04-18 01:53:19,835 | INFO     | sum of square deviations: 96643277333.71199
[2025-04-17 21:53:45] 2025-04-18 01:53:19,847 | INFO     | sum of deviations: 234711889416.83643
[2025-04-17 21:53:45] 2025-04-18 01:53:19,847 | INFO     | mean x: 1744920493.7654867
[2025-04-17 21:53:45] 2025-04-18 01:53:19,847 | INFO     | mean y: 2560747.087020649
[2025-04-17 21:53:45] 2025-04-18 01:53:19,848 | INFO     | -- intersect: -4235225856.109975
[2025-04-17 21:53:45] 2025-04-18 01:53:19,848 | INFO     | intersect: -4235225856.109975
[2025-04-17 21:53:45] 2025-04-18 01:53:19,849 | INFO     | chi2: 2.266999392365126
[2025-04-17 21:53:45] 2025-04-18 01:53:19,849 | INFO     | current chi2=2.266999392365126 (change=41.32597906411126 %)
[2025-04-17 21:53:45] 2025-04-18 01:53:19,850 | INFO     | sum of square deviations: 94520682317.6942
[2025-04-17 21:53:45] 2025-04-18 01:53:19,862 | INFO     | sum of deviations: 115335017391.60959
[2025-04-17 21:53:45] 2025-04-18 01:53:19,862 | INFO     | mean x: 1744920646.2734027
[2025-04-17 21:53:45] 2025-04-18 01:53:19,862 | INFO     | mean y: 2569315.659732541
[2025-04-17 21:53:45] 2025-04-18 01:53:19,862 | INFO     | -- intersect: -2126599117.6414268
[2025-04-17 21:53:45] 2025-04-18 01:53:19,862 | INFO     | intersect: -2126599117.6414268
[2025-04-17 21:53:45] 2025-04-18 01:53:19,863 | INFO     | chi2: 1.198730288375777
[2025-04-17 21:53:45] 2025-04-18 01:53:19,864 | INFO     | current chi2=1.198730288375777 (change=47.12260213157093 %)
[2025-04-17 21:53:45] 2025-04-18 01:53:19,865 | INFO     | sum of square deviations: 92429390458.08986
[2025-04-17 21:53:45] 2025-04-18 01:53:19,876 | INFO     | sum of deviations: 57424334162.52705
[2025-04-17 21:53:45] 2025-04-18 01:53:19,876 | INFO     | mean x: 1744920798.7814372
[2025-04-17 21:53:45] 2025-04-18 01:53:19,877 | INFO     | mean y: 2573536.7844311376
[2025-04-17 21:53:45] 2025-04-18 01:53:19,877 | INFO     | -- intersect: -1081507127.8154597
[2025-04-17 21:53:45] 2025-04-18 01:53:19,877 | INFO     | intersect: -1081507127.8154597
[2025-04-17 21:53:45] 2025-04-18 01:53:19,878 | INFO     | chi2: 0.9672402836108931
[2025-04-17 21:53:45] 2025-04-18 01:53:19,878 | INFO     | current chi2=0.9672402836108931 (change=19.31126684706883 %)
[2025-04-17 21:53:45] 2025-04-18 01:53:19,878 | INFO     | left removable region: 60
[2025-04-17 21:53:45] 2025-04-18 01:53:19,879 | INFO     | sum of square deviations: 78276906418.66968
[2025-04-17 21:53:45] 2025-04-18 01:53:19,889 | INFO     | sum of deviations: 45822604988.68824
[2025-04-17 21:53:45] 2025-04-18 01:53:19,890 | INFO     | mean x: 1744921530.795886
[2025-04-17 21:53:45] 2025-04-18 01:53:19,890 | INFO     | mean y: 2581259.726265823
[2025-04-17 21:53:45] 2025-04-18 01:53:19,890 | INFO     | -- intersect: -1018880288.77007
[2025-04-17 21:53:45] 2025-04-18 01:53:19,890 | INFO     | intersect: -1018880288.77007
[2025-04-17 21:53:45] 2025-04-18 01:53:19,891 | INFO     | chi2: 0.006891235062324096
[2025-04-17 21:53:45] 2025-04-18 01:53:19,891 | INFO     | -- intersect: -1018880288.77007
[2025-04-17 21:53:45] 2025-04-18 01:53:19,891 | INFO     | current memory leak: 0.59 B/s (using 632 data points, chi2=0.01)
[2025-04-17 21:53:45] 2025-04-18 01:53:19,892 | INFO     | ..............................
[2025-04-17 21:53:45] 2025-04-18 01:53:19,893 | INFO     | . Timing measurements:
[2025-04-17 21:53:45] 2025-04-18 01:53:19,893 | INFO     | . get job = 2 s
[2025-04-17 21:53:45] 2025-04-18 01:53:19,893 | INFO     | . initial setup = 23 s
[2025-04-17 21:53:45] 2025-04-18 01:53:19,893 | INFO     | . payload setup = 155 s
[2025-04-17 21:53:45] 2025-04-18 01:53:19,893 | INFO     | . stage-in = 1 s
[2025-04-17 21:53:45] 2025-04-18 01:53:19,893 | INFO     | . payload execution = 42711 s
[2025-04-17 21:53:45] 2025-04-18 01:53:19,893 | INFO     | . stage-out = 2 s
[2025-04-17 21:53:45] 2025-04-18 01:53:19,893 | INFO     | . log creation = 0 s
[2025-04-17 21:53:45] 2025-04-18 01:53:19,893 | INFO     | ..............................
[2025-04-17 21:53:45] 2025-04-18 01:53:20,026 | INFO     | 
[2025-04-17 21:53:45] 2025-04-18 01:53:20,027 | INFO     | job summary report
[2025-04-17 21:53:45] 2025-04-18 01:53:20,027 | INFO     | --------------------------------------------------
[2025-04-17 21:53:45] 2025-04-18 01:53:20,027 | INFO     | PanDA job id: 6605311585
[2025-04-17 21:53:45] 2025-04-18 01:53:20,027 | INFO     | task id: 44075483
[2025-04-17 21:53:45] 2025-04-18 01:53:20,027 | INFO     | errors: (none)
[2025-04-17 21:53:45] 2025-04-18 01:53:20,027 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 21:53:45] 2025-04-18 01:53:20,027 | INFO     | pilot state: finished 
[2025-04-17 21:53:45] 2025-04-18 01:53:20,028 | INFO     | transexitcode: 0
[2025-04-17 21:53:45] 2025-04-18 01:53:20,028 | INFO     | exeerrorcode: 0
[2025-04-17 21:53:45] 2025-04-18 01:53:20,028 | INFO     | exeerrordiag: 
[2025-04-17 21:53:45] 2025-04-18 01:53:20,028 | INFO     | exitcode: 0
[2025-04-17 21:53:45] 2025-04-18 01:53:20,028 | INFO     | exitmsg: OK
[2025-04-17 21:53:45] 2025-04-18 01:53:20,028 | INFO     | cpuconsumptiontime: 55253 s
[2025-04-17 21:53:45] 2025-04-18 01:53:20,028 | INFO     | nevents: 400
[2025-04-17 21:53:45] 2025-04-18 01:53:20,028 | INFO     | neventsw: 0
[2025-04-17 21:53:45] 2025-04-18 01:53:20,028 | INFO     | pid: 2534
[2025-04-17 21:53:45] 2025-04-18 01:53:20,028 | INFO     | pgrp: 2534
[2025-04-17 21:53:45] 2025-04-18 01:53:20,029 | INFO     | corecount: 10
[2025-04-17 21:53:45] 2025-04-18 01:53:20,029 | INFO     | event service: False
[2025-04-17 21:53:45] 2025-04-18 01:53:20,029 | INFO     | sizes: {0: 2425945, 3: 2426546, 5: 2426686, 7: 2426686, 8: 2426714, 9: 2426714, 10: 2427041, 21: 2427069, 33: 2427097, 46: 2427153, 57: 2427181, 68: 2427489, 80: 2
[2025-04-17 21:53:45] 2025-04-18 01:53:20,029 | INFO     | --------------------------------------------------
[2025-04-17 21:53:45] 2025-04-18 01:53:20,029 | INFO     | 
[2025-04-17 21:53:45] 2025-04-18 01:53:20,029 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 21:53:45] 2025-04-18 01:53:20,054 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,055 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,055 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,055 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,055 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,055 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,055 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,056 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,056 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,056 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,056 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,056 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,056 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,056 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,056 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,056 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,056 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,057 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 21:53:45] 2025-04-18 01:53:20,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,057 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 21:53:45] 2025-04-18 01:53:20,057 | INFO     | job 6605311585 has completed (purged errors)
[2025-04-17 21:53:45] 2025-04-18 01:53:20,057 | INFO     | overall cleanup function is called
[2025-04-17 21:53:45] 2025-04-18 01:53:21,065 | INFO     | --- collectZombieJob: --- 10, [2534]
[2025-04-17 21:53:45] 2025-04-18 01:53:21,066 | INFO     | zombie collector waiting for pid 2534
[2025-04-17 21:53:45] 2025-04-18 01:53:21,066 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 21:53:45] 2025-04-18 01:53:21,066 | INFO     | collected zombie processes
[2025-04-17 21:53:45] 2025-04-18 01:53:21,066 | INFO     | will attempt to kill all subprocesses of pid=2534
[2025-04-17 21:53:45] 2025-04-18 01:53:21,928 | INFO     | process IDs to be killed: [2534] (in reverse order)
[2025-04-17 21:53:45] 2025-04-18 01:53:22,133 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 21:53:45] 2025-04-18 01:53:22,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 21:53:45] 2025-04-18 01:53:22,146 | INFO     | did not find any defunct processes belonging to 2534
[2025-04-17 21:53:45] 2025-04-18 01:53:22,153 | INFO     | did not find any defunct processes belonging to 2534
[2025-04-17 21:53:45] 2025-04-18 01:53:22,153 | INFO     | ready for new job
[2025-04-17 21:53:45] 2025-04-18 01:53:22,154 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 21:53:45] 2025-04-18 01:53:22,156 | INFO     | **************************************
[2025-04-17 21:53:45] 2025-04-18 01:53:22,156 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 21:53:45] 2025-04-18 01:53:22,157 | INFO     | **************************************
[2025-04-17 21:53:45] 2025-04-18 01:53:22,157 | INFO     | 
[2025-04-17 21:53:45] 2025-04-18 01:53:22,191 | INFO     | architecture information:
[2025-04-17 21:53:45] 2025-04-18 01:53:22,211 | INFO     | executing command: cat /etc/os-release
[2025-04-17 21:53:45] 2025-04-18 01:53:22,242 | INFO     | cat /etc/os-release:
[2025-04-17 21:53:45] NAME="CentOS Linux"
[2025-04-17 21:53:45] VERSION="7 (Core)"
[2025-04-17 21:53:45] ID="centos"
[2025-04-17 21:53:45] ID_LIKE="rhel fedora"
[2025-04-17 21:53:45] VERSION_ID="7"
[2025-04-17 21:53:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 21:53:45] ANSI_COLOR="0;31"
[2025-04-17 21:53:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 21:53:45] HOME_URL="https://www.centos.org/"
[2025-04-17 21:53:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 21:53:45] 
[2025-04-17 21:53:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 21:53:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 21:53:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 21:53:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 21:53:45] 
[2025-04-17 21:53:45] 2025-04-18 01:53:22,243 | INFO     | **************************************
[2025-04-17 21:53:45] 2025-04-18 01:53:22,524 | INFO     | PID=23389 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-17 21:53:45] 2025-04-18 01:53:22,524 | INFO     | .. there are 13 such processes running
[2025-04-17 21:53:45] 2025-04-18 01:53:22,747 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 21:53:45] 2025-04-18 01:53:22,765 | INFO     | sufficient remaining disk space (56572772352 B)
[2025-04-17 21:53:45] 2025-04-18 01:53:22,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 21:53:45] 2025-04-18 01:53:22,766 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 21:53:45] 2025-04-18 01:53:22,766 | INFO     | update_server=False
[2025-04-17 21:53:45] 2025-04-18 01:53:22,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 21:53:45] 2025-04-18 01:53:22,767 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 21:53:45] 2025-04-18 01:53:22,768 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 21:53:45] 2025-04-18 01:53:22,768 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 21:53:45] 2025-04-18 01:53:22,768 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 21:53:45] 2025-04-18 01:53:22,902 | INFO     | all job control threads have been joined
[2025-04-17 21:53:45] 2025-04-18 01:53:22,950 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-17 21:53:45] 2025-04-18 01:53:22,950 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-17 21:53:45] 2025-04-18 01:53:22,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 21:53:45] 2025-04-18 01:53:22,951 | INFO     | will abort loop
[2025-04-17 21:53:45] 2025-04-18 01:53:23,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 21:53:45] 2025-04-18 01:53:23,386 | INFO     | all data control threads have been joined
[2025-04-17 21:53:45] 2025-04-18 01:53:23,773 | INFO     | [job] retrieve thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:23,790 | INFO     | all payload control threads have been joined
[2025-04-17 21:53:45] 2025-04-18 01:53:23,845 | INFO     | [payload] validate_post thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:23,908 | INFO     | [job] control thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:23,956 | INFO     | [job] job monitor thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:24,029 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:24,041 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:24,282 | INFO     | [job] validate thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:24,393 | INFO     | [data] control thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:24,643 | INFO     | [data] copytool_in thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:24,654 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:24,736 | INFO     | [payload] failed_post thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:24,796 | INFO     | [payload] control thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:25,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 21:53:45] 2025-04-18 01:53:25,255 | INFO     | [data] copytool_out thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:26,031 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 21:53:45] 2025-04-18 01:53:26,047 | INFO     | [job] queue monitor thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:30,039 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:33,292 | INFO     | job.realtimelogging is not enabled
[2025-04-17 21:53:45] 2025-04-18 01:53:34,299 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 21:53:45] 2025-04-18 01:53:36,403 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040333227840)>', '<ExcThread(monitor, started 140040114689792)>']
[2025-04-17 21:53:45] 2025-04-18 01:53:36,849 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 21:53:45] 2025-04-18 01:53:36,850 | INFO     | [monitor] control thread has ended
[2025-04-17 21:53:45] 2025-04-18 01:53:41,428 | INFO     | all workflow threads have been joined
[2025-04-17 21:53:45] 2025-04-18 01:53:41,429 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 21:53:45] 2025-04-18 01:53:41,435 | INFO     | traces error code: 0
[2025-04-17 21:53:45] 2025-04-18 01:53:41,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 21:53:45] 2025-04-18 01:53:42,097 [wrapper] ==== pilot stdout END ====
[2025-04-17 21:53:45] 2025-04-18 01:53:42,143 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 21:53:45] 2025-04-18 01:53:42,199 [wrapper] pilotpid: 23389
[2025-04-17 21:53:45] 2025-04-18 01:53:42,251 [wrapper] Pilot exit status: 0
[2025-04-17 21:53:45] 2025-04-18 01:53:42,303 [wrapper] pandaids: 6605311585
[2025-04-17 21:53:45] 2025-04-18 01:53:43,106 [wrapper] cleanup supervisor_pilot 31106 23390
[2025-04-17 21:53:45] 2025-04-18 01:53:43,153 [wrapper] Test setup, not cleaning
[2025-04-17 21:53:45] 2025-04-18 01:53:43,215 [wrapper] apfmon messages muted
[2025-04-17 21:53:45] 2025-04-18 01:53:43,266 [wrapper] ==== wrapper stdout END ====
[2025-04-17 21:53:45] 2025-04-18 01:53:43,300 [wrapper] ==== wrapper stderr END ====
[2025-04-17 21:53:45]  *** Error codes and diagnostics ***
[2025-04-17 21:53:45]     "exeErrorCode": 0,
[2025-04-17 21:53:45]     "exeErrorDiag": "",
[2025-04-17 21:53:45]     "pilotErrorCode": 0,
[2025-04-17 21:53:45]     "pilotErrorDiag": "",
[2025-04-17 21:53:45]  *** Listing of results directory ***
[2025-04-17 21:53:45] total 425836
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas    495897 Apr 17 06:13 pilot3.tar.gz
[2025-04-17 21:53:45] -rwx------ 1 boincer umatlas     37140 Apr 17 06:26 runpilot2-wrapper.sh
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 06:26 queuedata.json
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas       100 Apr 17 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 21:53:45] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 09:50 run_atlas
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas       105 Apr 17 09:50 job.xml
[2025-04-17 21:53:45] -rw-r--r-- 2 boincer umatlas 226143958 Apr 17 09:50 EVNT.44075481._002115.pool.root.1
[2025-04-17 21:53:45] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 09:50 start_atlas.sh
[2025-04-17 21:53:45] drwxrwx--x 2 boincer umatlas      4096 Apr 17 09:50 shared
[2025-04-17 21:53:45] -rw-r--r-- 2 boincer umatlas    508884 Apr 17 09:50 input.tar.gz
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas         0 Apr 17 09:50 boinc_lockfile
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas      2578 Apr 17 09:51 pandaJob.out
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas       467 Apr 17 09:52 setup.sh.local
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas    990266 Apr 17 09:55 agis_schedconf.cvmfs.json
[2025-04-17 21:53:45] drwx------ 4 boincer umatlas      4096 Apr 17 09:55 pilot3
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas      6229 Apr 17 21:45 init_data.xml
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas 198393652 Apr 17 21:52 HITS.44075483._054403.pool.root.1
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas       531 Apr 17 21:52 boinc_task_state.xml
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas      1064 Apr 17 21:53 memory_monitor_summary.json
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas   1618536 Apr 17 21:53 agis_ddmendpoints.agis.ALL.json
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas    667301 Apr 17 21:53 log.44075483._054403.job.log.tgz.1
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas      7770 Apr 17 21:53 heartbeat.json
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas        95 Apr 17 21:53 pilot_heartbeat.json
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 21:53 boinc_mmap_file
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas        28 Apr 17 21:53 wrapper_checkpoint.txt
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas      5128 Apr 17 21:53 pilotlog.txt
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas   3164164 Apr 17 21:53 log.44075483._054403.job.log.1
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas       357 Apr 17 21:53 output.list
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas       620 Apr 17 21:53 runtime_log
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas   3850240 Apr 17 21:53 result.tar.gz
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas     11421 Apr 17 21:53 runtime_log.err
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas       664 Apr 17 21:53 IjnMDmvcbP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmcgcLDmJPeOTm.diag
[2025-04-17 21:53:45] -rw-r--r-- 1 boincer umatlas     21073 Apr 17 21:53 stderr.txt
[2025-04-17 21:53:45] HITS file was successfully produced:
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas 198393652 Apr 17 21:52 shared/HITS.pool.root.1
[2025-04-17 21:53:45]  *** Contents of shared directory: ***
[2025-04-17 21:53:45] total 418872
[2025-04-17 21:53:45] -rw-r--r-- 2 boincer umatlas 226143958 Apr 17 09:50 ATLAS.root_0
[2025-04-17 21:53:45] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 09:50 start_atlas.sh
[2025-04-17 21:53:45] -rw-r--r-- 2 boincer umatlas    508884 Apr 17 09:50 input.tar.gz
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas 198393652 Apr 17 21:52 HITS.pool.root.1
[2025-04-17 21:53:45] -rw------- 1 boincer umatlas   3850240 Apr 17 21:53 result.tar.gz
21:53:46 (15682): run_atlas exited; CPU time 56241.601534
21:53:46 (15682): called boinc_finish(0)

</stderr_txt>
]]>

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