Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 20:18:15 (17362): Detected: vboxwrapper 26206
2025-04-17 20:18:15 (17362): Detected: BOINC client v8.0.2
2025-04-17 20:18:16 (17362): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-17 20:18:16 (17362): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 20:18:16 (17362): Create VM. (boinc_e42b45717224995c, slot#1)
2025-04-17 20:18:16 (17362): Setting Memory Size for VM. (4800MB)
2025-04-17 20:18:16 (17362): Setting CPU Count for VM. (8)
2025-04-17 20:18:16 (17362): Setting Chipset Options for VM.
2025-04-17 20:18:16 (17362): Setting Graphics Controller Options for VM.
2025-04-17 20:18:16 (17362): Setting Boot Options for VM.
2025-04-17 20:18:16 (17362): Setting Network Configuration for NAT.
2025-04-17 20:18:16 (17362): Enabling VM Network Access.
2025-04-17 20:18:16 (17362): Disabling USB Support for VM.
2025-04-17 20:18:16 (17362): Disabling COM Port Support for VM.
2025-04-17 20:18:16 (17362): Disabling LPT Port Support for VM.
2025-04-17 20:18:16 (17362): Disabling Audio Support for VM.
2025-04-17 20:18:16 (17362): Disabling Clipboard Support for VM.
2025-04-17 20:18:16 (17362): Disabling Drag and Drop Support for VM.
2025-04-17 20:18:16 (17362): Adding storage controller(s) to VM.
2025-04-17 20:18:16 (17362): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 20:18:17 (17362): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 20:18:17 (17362): forwarding host port 49347 to guest port 80
2025-04-17 20:18:17 (17362): Enabling remote desktop for VM.
2025-04-17 20:18:17 (17362): Required extension pack not installed, remote desktop not enabled.
2025-04-17 20:18:17 (17362): Enabling shared directory for VM.
2025-04-17 20:18:18 (17362): Starting VM using VBoxManage interface. (boinc_e42b45717224995c, slot#1)
2025-04-17 20:18:19 (17362): Successfully started VM. (PID = '17935')
2025-04-17 20:18:19 (17362): Reporting VM Process ID to BOINC.
2025-04-17 20:18:19 (17362): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-17 20:18:19 (17362): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 20:18:19 (17362): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 20:18:19 (17362): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 20:18:19 (17362): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 20:18:19 (17362): Detected: Web Application Enabled (http://localhost:49347)
2025-04-17 20:18:20 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 20:18:37 (17362): Preference change detected
2025-04-17 20:18:37 (17362): Setting CPU throttle for VM. (100%)
2025-04-17 20:18:38 (17362): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 20:18:38 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 20:18:39 (17362): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 20:18:39 (17362): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 20:18:42 (17362): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 20:18:42 (17362): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 20:18:42 (17362): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 20:18:47 (17362): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 20:18:47 (17362): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 20:18:50 (17362): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 20:18:50 (17362): Guest Log: 00:00:00.000115 main     Log opened 2025-04-17T19:18:31.173077000Z
2025-04-17 20:18:50 (17362): Guest Log: 00:00:00.000182 main     OS Product: Linux
2025-04-17 20:18:50 (17362): Guest Log: 00:00:00.000195 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 20:18:50 (17362): Guest Log: 00:00:00.000206 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 20:18:50 (17362): Guest Log: 00:00:00.000216 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 20:18:50 (17362): Guest Log: 00:00:00.000217 main     Process ID: 1359
2025-04-17 20:18:50 (17362): Guest Log: 00:00:00.000217 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 20:18:50 (17362): Guest Log: 00:00:00.000575 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 20:19:21 (17362): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 20:19:21 (17362): Guest Log: [INFO] Mounting shared directory
2025-04-17 20:19:21 (17362): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 20:20:48 (17362): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 20:20:48 (17362): Guest Log: [INFO] Detected branch: prod
2025-04-17 20:20:48 (17362): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 20:20:48 (17362): Guest Log: Copying input files
2025-04-17 20:20:48 (17362): Guest Log: Copied input files into RunAtlas.
2025-04-17 20:20:48 (17362): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-17 20:20:48 (17362): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-17 20:20:48 (17362): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-17 20:20:48 (17362): Guest Log: Further information can be found at the LHC@home message board.
2025-04-17 20:22:21 (17362): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 20:22:21 (17362): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 20:22:21 (17362): Guest Log: 2.6.3.0 1686 2 30136 144976 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-17 20:22:21 (17362): Guest Log: copied the webapp to /var/www
2025-04-17 20:22:21 (17362): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-17 20:22:21 (17362): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-17 20:22:22 (17362): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 20:22:22 (17362): Guest Log:  *** Starting ATLAS job. (PandaID=6605310428 taskID=44075483) ***
2025-04-17 20:46:27 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 20:46:48 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 20:47:07 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 20:47:27 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 20:48:18 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 20:48:37 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 20:49:48 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 20:50:09 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 21:12:06 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 21:12:26 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 21:15:08 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 21:15:47 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 21:15:57 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 21:16:18 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 21:17:07 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 21:17:28 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 21:19:19 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 21:19:39 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 21:21:40 (17362): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 21:22:00 (17362): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 21:22:05 (17362): Guest Log:  *** Job finished ***
2025-04-17 21:22:06 (17362): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:23,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:24,303 | INFO     | [job] queue monitor thread has finished
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:25,439 | INFO     | [data] queue_monitor thread has finished
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:27,290 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060864563008)>', '<ExcThread(monitor, started 140060116625152)>']
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:27,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:27,935 | INFO     | [monitor] control thread has ended
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,301 | INFO     | all workflow threads have been joined
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,302 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,302 | INFO     | traces error code: 0
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,302 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,372 [wrapper] ==== pilot stdout END ====
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,375 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,378 [wrapper] pilotpid: 6139
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,381 [wrapper] Pilot exit status: 0
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,485 [wrapper] pandaids: 6605310428
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,504 [wrapper] cleanup supervisor_pilot 22183 6140
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,507 [wrapper] Test setup, not cleaning
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,510 [wrapper] apfmon messages muted
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,513 [wrapper] ==== wrapper stdout END ====
2025-04-17 21:22:06 (17362): Guest Log: 2025-04-17 20:23:32,516 [wrapper] ==== wrapper stderr END ====
2025-04-17 21:22:06 (17362): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 21:22:06 (17362): Guest Log:     "exeErrorCode": 0,
2025-04-17 21:22:06 (17362): Guest Log:     "exeErrorDiag": "",
2025-04-17 21:22:06 (17362): Guest Log:     "pilotErrorCode": 0,
2025-04-17 21:22:06 (17362): Guest Log:     "pilotErrorDiag": "",
2025-04-17 21:22:06 (17362): Guest Log:  *** Listing of results directory ***
2025-04-17 21:22:06 (17362): Guest Log: total 195096
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 09:48 pilot3.tar.gz
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 09:54 queuedata.json
2025-04-17 21:22:06 (17362): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 09:55 runpilot2-wrapper.sh
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 17 19:20 start_atlas.sh
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 atlas atlas    508897 Apr 17 19:20 input.tar.gz
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 atlas atlas      6948 Apr 17 19:20 init_data.xml
2025-04-17 21:22:06 (17362): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 19:20 EVNT.44075481._002102.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 17 19:22 pandaJob.out
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 19:22 setup.sh.local
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas    990274 Apr 17 19:27 agis_schedconf.cvmfs.json
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 17 19:27 agis_ddmendpoints.agis.ALL.json
2025-04-17 21:22:06 (17362): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 19:27 pilot3
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas 194812319 Apr 17 20:18 HITS.44075483._054057.pool.root.1
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas      1024 Apr 17 20:18 memory_monitor_summary.json
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas    271885 Apr 17 20:19 log.44075483._054057.job.log.tgz.1
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas        95 Apr 17 20:22 pilot_heartbeat.json
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas      7679 Apr 17 20:23 heartbeat.json
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 17 20:23 pilotlog.txt
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas    315525 Apr 17 20:23 log.44075483._054057.job.log.1
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 20:23 output.list
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 20:23 runtime_log
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas    604160 Apr 17 20:23 result.tar.gz
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 atlas atlas     10949 Apr 17 20:23 runtime_log.err
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas       658 Apr 17 20:23 lfWNDmo8aP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmCq3KDmOutsNm.diag
2025-04-17 21:22:06 (17362): Guest Log: Looking for outputfile HITS.44075483._054057.pool.root.1
2025-04-17 21:22:06 (17362): Guest Log: HITS file was successfully produced
2025-04-17 21:22:06 (17362): Guest Log: -rw-------. 1 atlas atlas 194812319 Apr 17 20:18 /home/atlas/RunAtlas/HITS.44075483._054057.pool.root.1
2025-04-17 21:22:06 (17362): Guest Log: Successfully finished the ATLAS job!
2025-04-17 21:22:06 (17362): Guest Log: Copying the results back to the shared directory!
2025-04-17 21:22:06 (17362): Guest Log:  *** Contents of shared directory: ***
2025-04-17 21:22:06 (17362): Guest Log: total 221980
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 root root 226160627 Apr 17 19:18 ATLAS.root_0
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 root root      6948 Apr 17 19:18 init_data.xml
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 root root    508897 Apr 17 19:18 input.tar.gz
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 root root    604160 Apr 17 20:22 result.tar.gz
2025-04-17 21:22:06 (17362): Guest Log: -rw-r--r--. 1 root root     17569 Apr 17 19:18 start_atlas.sh
2025-04-17 21:22:06 (17362): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 21:22:06 (17362): VM Completion File Detected.
2025-04-17 21:22:06 (17362): Powering off VM.
2025-04-17 21:22:07 (17362): Successfully stopped VM.
2025-04-17 21:22:07 (17362): Deregistering VM. (boinc_e42b45717224995c, slot#1)
2025-04-17 21:22:07 (17362): Removing network bandwidth throttle group from VM.
2025-04-17 21:22:07 (17362): Removing VM from VirtualBox.
21:22:12 (17362): called boinc_finish(0)

</stderr_txt>
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