Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
01:47:43 (145241): wrapper (7.7.26015): starting
01:47:43 (145241): wrapper: running run_atlas (--nthreads 3)
[2025-04-18 01:47:43] Arguments: --nthreads 3
[2025-04-18 01:47:43] Threads: 3
[2025-04-18 01:47:43] Checking for CVMFS
[2025-04-18 01:47:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 01:47:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 01:47:43] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 01:47:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 01:47:43] 2.9.2.0 3010475 4351 88668 144982 1 56 24176838 36864000 0 130560 0 3240780 99.991 1044484 13264 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-18 01:47:43] CVMFS is ok
[2025-04-18 01:47:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 01:47:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 01:47:43] Further information can be found at the LHC@home message board.
[2025-04-18 01:47:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 01:47:43] Checking for apptainer binary...
[2025-04-18 01:47:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 01:47:43] Running /usr/bin/apptainer --version
[2025-04-18 01:47:43] apptainer version 1.3.6-6.1
[2025-04-18 01:47:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 01:47:43] thA305b
[2025-04-18 01:47:43] apptainer works
[2025-04-18 01:47:43] Set ATHENA_PROC_NUMBER=3
[2025-04-18 01:47:43] Set ATHENA_CORE_NUMBER=3
[2025-04-18 01:47:43] Starting ATLAS job with PandaID=6605310435
[2025-04-18 01:47:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 03:17:21]  *** The last 200 lines of the pilot log: ***
[2025-04-18 03:17:21]  lfn=log.44075483._054064.job.log.tgz.1
[2025-04-18 03:17:21]  mtime=0
[2025-04-18 03:17:21]  protocol_id=None
[2025-04-18 03:17:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-18 03:17:21]  replicas=None
[2025-04-18 03:17:21]  scope=mc23_13p6TeV
[2025-04-18 03:17:21]  status=None
[2025-04-18 03:17:21]  status_code=0
[2025-04-18 03:17:21]  storage_token=
[2025-04-18 03:17:21]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6605310435/log.44075483._054064.job.log.tgz.1
[2025-04-18 03:17:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/89/log.44075483._054064.job.log.tgz.1
[2025-04-18 03:17:21]  workdir=None
[2025-04-18 03:17:21] ]
[2025-04-18 03:17:21] 2025-04-18 01:16:54,139 | INFO     | transferring file log.44075483._054064.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6605310435/log.44075483._054064.job.log.tgz.1 to /local/data/boinc/
[2025-04-18 03:17:21] 2025-04-18 01:16:54,139 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6605310435/log.44075483._054064.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0540
[2025-04-18 03:17:21] 2025-04-18 01:16:54,153 | INFO     | adding to output.list: log.44075483._054064.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2f/89/log.44075483._054064.job.log.tg
[2025-04-18 03:17:21] 2025-04-18 01:16:54,154 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-18 03:17:21] 2025-04-18 01:16:54,154 | INFO     | summary of transferred files:
[2025-04-18 03:17:21] 2025-04-18 01:16:54,154 | INFO     |  -- lfn=log.44075483._054064.job.log.tgz.1, status_code=0, status=transferred
[2025-04-18 03:17:21] 2025-04-18 01:16:54,154 | INFO     | stage-out finished correctly
[2025-04-18 03:17:21] 2025-04-18 01:16:56,547 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-18 03:17:21] 2025-04-18 01:16:56,580 | INFO     | monitor loop #412: job 0:6605310435 is in state 'finished'
[2025-04-18 03:17:21] 2025-04-18 01:16:56,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:17:21] 2025-04-18 01:16:58,636 | INFO     | job 6605310435 has state=finished
[2025-04-18 03:17:21] 2025-04-18 01:16:58,636 | INFO     | preparing for final server update for job 6605310435 in state='finished'
[2025-04-18 03:17:21] 2025-04-18 01:16:58,636 | INFO     | this job has now completed (state=finished)
[2025-04-18 03:17:21] 2025-04-18 01:16:58,636 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-18 03:17:21] 2025-04-18 01:16:58,637 | INFO     | log transfer has been attempted: DONE
[2025-04-18 03:17:21] 2025-04-18 01:16:58,637 | INFO     | job 6605310435 has finished - writing final server update
[2025-04-18 03:17:21] 2025-04-18 01:16:58,637 | INFO     | total number of processed events: 400 (read)
[2025-04-18 03:17:21] 2025-04-18 01:16:58,638 | INFO     | executing command: lscpu
[2025-04-18 03:17:21] 2025-04-18 01:16:58,655 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-18 03:17:21] 2025-04-18 01:16:59,083 | INFO     | monitor loop #413: job 0:6605310435 is in state 'finished'
[2025-04-18 03:17:21] 2025-04-18 01:16:59,083 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:17:21] 2025-04-18 01:17:01,586 | INFO     | monitor loop #414: job 0:6605310435 is in state 'finished'
[2025-04-18 03:17:21] 2025-04-18 01:17:01,586 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 03:17:21] 2025-04-18 01:17:01,812 | INFO     | PID=148902 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-18 03:17:21] 2025-04-18 01:17:02,361 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 03:17:21] 2025-04-18 01:17:02,362 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6605310435/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 03:17:21] 2025-04-18 01:17:02,362 | INFO     | extracted standard info from prmon json
[2025-04-18 03:17:21] 2025-04-18 01:17:02,362 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 03:17:21] 2025-04-18 01:17:02,362 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 03:17:21] 2025-04-18 01:17:02,362 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 03:17:21] 2025-04-18 01:17:02,362 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 03:17:21] 2025-04-18 01:17:02,363 | INFO     | fitting pss+swap vs Time
[2025-04-18 03:17:21] 2025-04-18 01:17:02,363 | INFO     | sum of square deviations: 164765880.0
[2025-04-18 03:17:21] 2025-04-18 01:17:02,363 | INFO     | sum of deviations: 1764048630.0000007
[2025-04-18 03:17:21] 2025-04-18 01:17:02,363 | INFO     | mean x: 1744936434.0
[2025-04-18 03:17:21] 2025-04-18 01:17:02,363 | INFO     | mean y: 2378808.6913580247
[2025-04-18 03:17:21] 2025-04-18 01:17:02,363 | INFO     | -- intersect: -18679600286.948994
[2025-04-18 03:17:21] 2025-04-18 01:17:02,363 | INFO     | intersect: -18679600286.948994
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | chi2: 1.0864133135824212
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | -- intersect: -18679600286.948994
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | current memory leak: 10.71 B/s (using 81 data points, chi2=1.09)
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | ..............................
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | . Timing measurements:
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | . get job = 0 s
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | . initial setup = 1 s
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | . payload setup = 3 s
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | . stage-in = 0 s
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | . payload execution = 5324 s
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | . stage-out = 0 s
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | . log creation = 0 s
[2025-04-18 03:17:21] 2025-04-18 01:17:02,364 | INFO     | ..............................
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | 
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | job summary report
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | --------------------------------------------------
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | PanDA job id: 6605310435
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | task id: 44075483
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | errors: (none)
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | pilot state: finished 
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | transexitcode: 0
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | exeerrorcode: 0
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | exeerrordiag: 
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | exitcode: 0
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | exitmsg: OK
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | cpuconsumptiontime: 14082 s
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | nevents: 400
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | neventsw: 0
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | pid: 155351
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | pgrp: 155351
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | corecount: 3
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | event service: False
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | sizes: {0: 2426827, 3: 2427033, 11: 2427061, 5331: 2453606, 5332: 2462553, 5334: 2462609, 5340: 2462907}
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | --------------------------------------------------
[2025-04-18 03:17:21] 2025-04-18 01:17:02,395 | INFO     | 
[2025-04-18 03:17:21] 2025-04-18 01:17:02,396 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | job 6605310435 has completed (purged errors)
[2025-04-18 03:17:21] 2025-04-18 01:17:02,408 | INFO     | overall cleanup function is called
[2025-04-18 03:17:21] 2025-04-18 01:17:03,413 | INFO     | --- collectZombieJob: --- 10, [155351]
[2025-04-18 03:17:21] 2025-04-18 01:17:03,413 | INFO     | zombie collector waiting for pid 155351
[2025-04-18 03:17:21] 2025-04-18 01:17:03,413 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 03:17:21] 2025-04-18 01:17:03,414 | INFO     | collected zombie processes
[2025-04-18 03:17:21] 2025-04-18 01:17:03,414 | INFO     | will attempt to kill all subprocesses of pid=155351
[2025-04-18 03:17:21] 2025-04-18 01:17:03,463 | INFO     | process IDs to be killed: [155351] (in reverse order)
[2025-04-18 03:17:21] 2025-04-18 01:17:03,490 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 03:17:21] 2025-04-18 01:17:03,490 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 03:17:21] 2025-04-18 01:17:03,492 | INFO     | did not find any defunct processes belonging to 155351
[2025-04-18 03:17:21] 2025-04-18 01:17:03,493 | INFO     | did not find any defunct processes belonging to 155351
[2025-04-18 03:17:21] 2025-04-18 01:17:03,493 | INFO     | ready for new job
[2025-04-18 03:17:21] 2025-04-18 01:17:03,493 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 03:17:21] 2025-04-18 01:17:03,493 | INFO     | **************************************
[2025-04-18 03:17:21] 2025-04-18 01:17:03,494 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 03:17:21] 2025-04-18 01:17:03,494 | INFO     | **************************************
[2025-04-18 03:17:21] 2025-04-18 01:17:03,494 | INFO     | 
[2025-04-18 03:17:21] 2025-04-18 01:17:03,494 | INFO     | architecture information:
[2025-04-18 03:17:21] 2025-04-18 01:17:03,494 | INFO     | executing command: cat /etc/os-release
[2025-04-18 03:17:21] 2025-04-18 01:17:03,504 | INFO     | cat /etc/os-release:
[2025-04-18 03:17:21] NAME="CentOS Linux"
[2025-04-18 03:17:21] VERSION="7 (Core)"
[2025-04-18 03:17:21] ID="centos"
[2025-04-18 03:17:21] ID_LIKE="rhel fedora"
[2025-04-18 03:17:21] VERSION_ID="7"
[2025-04-18 03:17:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 03:17:21] ANSI_COLOR="0;31"
[2025-04-18 03:17:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 03:17:21] HOME_URL="https://www.centos.org/"
[2025-04-18 03:17:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 03:17:21] 
[2025-04-18 03:17:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 03:17:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 03:17:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 03:17:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 03:17:21] 
[2025-04-18 03:17:21] 2025-04-18 01:17:03,504 | INFO     | **************************************
[2025-04-18 03:17:21] 2025-04-18 01:17:04,007 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-18 03:17:21] 2025-04-18 01:17:04,020 | INFO     | sufficient remaining disk space (175471853568 B)
[2025-04-18 03:17:21] 2025-04-18 01:17:04,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 03:17:21] 2025-04-18 01:17:04,020 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 03:17:21] 2025-04-18 01:17:04,021 | INFO     | update_server=False
[2025-04-18 03:17:21] 2025-04-18 01:17:04,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 03:17:21] 2025-04-18 01:17:04,021 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 03:17:21] 2025-04-18 01:17:04,021 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-18 03:17:21] 2025-04-18 01:17:04,021 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 03:17:21] 2025-04-18 01:17:04,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 03:17:21] 2025-04-18 01:17:04,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 03:17:21] 2025-04-18 01:17:04,090 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-18 03:17:21] 2025-04-18 01:17:04,090 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-18 03:17:21] 2025-04-18 01:17:04,090 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 03:17:21] 2025-04-18 01:17:04,090 | INFO     | will abort loop
[2025-04-18 03:17:21] 2025-04-18 01:17:04,206 | INFO     | all data control threads have been joined
[2025-04-18 03:17:21] 2025-04-18 01:17:04,440 | INFO     | all payload control threads have been joined
[2025-04-18 03:17:21] 2025-04-18 01:17:04,468 | INFO     | all job control threads have been joined
[2025-04-18 03:17:21] 2025-04-18 01:17:04,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 03:17:21] 2025-04-18 01:17:05,026 | INFO     | [job] queue monitor thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:05,027 | INFO     | [job] retrieve thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:05,095 | INFO     | [job] job monitor thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:05,206 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:05,211 | INFO     | [data] control thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:05,446 | INFO     | [payload] control thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:05,474 | INFO     | [job] control thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:05,693 | INFO     | [data] copytool_in thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:05,931 | INFO     | [payload] validate_post thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:05,971 | INFO     | [job] validate thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:06,032 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:06,098 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:06,201 | INFO     | [payload] failed_post thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:06,706 | INFO     | [data] copytool_out thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:07,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 03:17:21] 2025-04-18 01:17:11,099 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:14,842 | INFO     | job.realtimelogging is not enabled
[2025-04-18 03:17:21] 2025-04-18 01:17:15,847 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 03:17:21] 2025-04-18 01:17:16,359 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445637019456)>', '<ExcThread(monitor, started 140445128570624)>']
[2025-04-18 03:17:21] 2025-04-18 01:17:17,085 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 03:17:21] 2025-04-18 01:17:17,085 | INFO     | [monitor] control thread has ended
[2025-04-18 03:17:21] 2025-04-18 01:17:21,385 | INFO     | all workflow threads have been joined
[2025-04-18 03:17:21] 2025-04-18 01:17:21,385 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 03:17:21] 2025-04-18 01:17:21,385 | INFO     | traces error code: 0
[2025-04-18 03:17:21] 2025-04-18 01:17:21,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 03:17:21] 2025-04-18 01:17:21,436 [wrapper] ==== pilot stdout END ====
[2025-04-18 03:17:21] 2025-04-18 01:17:21,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 03:17:21] 2025-04-18 01:17:21,442 [wrapper] pilotpid: 148902
[2025-04-18 03:17:21] 2025-04-18 01:17:21,444 [wrapper] Pilot exit status: 0
[2025-04-18 03:17:21] 2025-04-18 01:17:21,452 [wrapper] pandaids: 6605310435
[2025-04-18 03:17:21] 2025-04-18 01:17:21,470 [wrapper] cleanup supervisor_pilot  167414 148903
[2025-04-18 03:17:21] 2025-04-18 01:17:21,472 [wrapper] Test setup, not cleaning
[2025-04-18 03:17:21] 2025-04-18 01:17:21,475 [wrapper] apfmon messages muted
[2025-04-18 03:17:21] 2025-04-18 01:17:21,478 [wrapper] ==== wrapper stdout END ====
[2025-04-18 03:17:21] 2025-04-18 01:17:21,480 [wrapper] ==== wrapper stderr END ====
[2025-04-18 03:17:21]  *** Error codes and diagnostics ***
[2025-04-18 03:17:21]     "exeErrorCode": 0,
[2025-04-18 03:17:21]     "exeErrorDiag": "",
[2025-04-18 03:17:21]     "pilotErrorCode": 0,
[2025-04-18 03:17:21]     "pilotErrorDiag": "",
[2025-04-18 03:17:21]  *** Listing of results directory ***
[2025-04-18 03:17:21] total 413564
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc    495897 Apr 17 11:48 pilot3.tar.gz
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc      5111 Apr 17 11:54 queuedata.json
[2025-04-18 03:17:21] -rwx------ 1 boinc boinc     37140 Apr 17 11:55 runpilot2-wrapper.sh
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc       100 Apr 18 01:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 03:17:21] -rwxr-xr-x 1 boinc boinc      7986 Apr 18 01:47 run_atlas
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc       105 Apr 18 01:47 job.xml
[2025-04-18 03:17:21] -rw-r--r-- 2 boinc boinc 226160627 Apr 18 01:47 EVNT.44075481._002102.pool.root.1
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc      6930 Apr 18 01:47 init_data.xml
[2025-04-18 03:17:21] drwxrwx--x 2 boinc boinc      4096 Apr 18 01:47 shared
[2025-04-18 03:17:21] -rw-r--r-- 2 boinc boinc    508892 Apr 18 01:47 input.tar.gz
[2025-04-18 03:17:21] -rw-r--r-- 2 boinc boinc     17569 Apr 18 01:47 start_atlas.sh
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc         0 Apr 18 01:47 boinc_lockfile
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc      2579 Apr 18 01:47 pandaJob.out
[2025-04-18 03:17:21] -rw------- 1 boinc boinc       424 Apr 18 01:47 setup.sh.local
[2025-04-18 03:17:21] -rw------- 1 boinc boinc    990266 Apr 18 01:47 agis_schedconf.cvmfs.json
[2025-04-18 03:17:21] -rw------- 1 boinc boinc   1618536 Apr 18 01:47 agis_ddmendpoints.agis.ALL.json
[2025-04-18 03:17:21] drwx------ 4 boinc boinc      4096 Apr 18 01:47 pilot3
[2025-04-18 03:17:21] -rw------- 1 boinc boinc        95 Apr 18 03:16 pilot_heartbeat.json
[2025-04-18 03:17:21] -rw------- 1 boinc boinc 191987675 Apr 18 03:16 HITS.44075483._054064.pool.root.1
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc       530 Apr 18 03:16 boinc_task_state.xml
[2025-04-18 03:17:21] -rw------- 1 boinc boinc      1017 Apr 18 03:16 memory_monitor_summary.json
[2025-04-18 03:17:21] -rw------- 1 boinc boinc    228331 Apr 18 03:16 log.44075483._054064.job.log.tgz.1
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc      8192 Apr 18 03:16 boinc_mmap_file
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc        27 Apr 18 03:16 wrapper_checkpoint.txt
[2025-04-18 03:17:21] -rw------- 1 boinc boinc      7650 Apr 18 03:17 heartbeat.json
[2025-04-18 03:17:21] -rw------- 1 boinc boinc      4738 Apr 18 03:17 pilotlog.txt
[2025-04-18 03:17:21] -rw------- 1 boinc boinc    515061 Apr 18 03:17 log.44075483._054064.job.log.1
[2025-04-18 03:17:21] -rw------- 1 boinc boinc       357 Apr 18 03:17 output.list
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc       620 Apr 18 03:17 runtime_log
[2025-04-18 03:17:21] -rw------- 1 boinc boinc    757760 Apr 18 03:17 result.tar.gz
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc     11104 Apr 18 03:17 runtime_log.err
[2025-04-18 03:17:21] -rw------- 1 boinc boinc       659 Apr 18 03:17 B7uNDmo8aP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmJq3KDmdE8MWm.diag
[2025-04-18 03:17:21] -rw-r--r-- 1 boinc boinc     21641 Apr 18 03:17 stderr.txt
[2025-04-18 03:17:21] HITS file was successfully produced:
[2025-04-18 03:17:21] -rw------- 1 boinc boinc 191987675 Apr 18 03:16 shared/HITS.pool.root.1
[2025-04-18 03:17:21]  *** Contents of shared directory: ***
[2025-04-18 03:17:21] total 409616
[2025-04-18 03:17:21] -rw-r--r-- 2 boinc boinc 226160627 Apr 18 01:47 ATLAS.root_0
[2025-04-18 03:17:21] -rw-r--r-- 2 boinc boinc    508892 Apr 18 01:47 input.tar.gz
[2025-04-18 03:17:21] -rw-r--r-- 2 boinc boinc     17569 Apr 18 01:47 start_atlas.sh
[2025-04-18 03:17:21] -rw------- 1 boinc boinc 191987675 Apr 18 03:16 HITS.pool.root.1
[2025-04-18 03:17:21] -rw------- 1 boinc boinc    757760 Apr 18 03:17 result.tar.gz
03:17:22 (145241): run_atlas exited; CPU time 14104.631653
03:17:22 (145241): called boinc_finish(0)

</stderr_txt>
]]>

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