Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 13:54:28 (29660): Detected: vboxwrapper 26206
2025-04-17 13:54:28 (29660): Detected: BOINC client v8.0.2
2025-04-17 13:54:29 (29660): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-17 13:54:29 (29660): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 13:54:30 (29660): Create VM. (boinc_d1d7043c463c1564, slot#3)
2025-04-17 13:54:30 (29660): Setting Memory Size for VM. (4800MB)
2025-04-17 13:54:30 (29660): Setting CPU Count for VM. (8)
2025-04-17 13:54:31 (29660): Setting Chipset Options for VM.
2025-04-17 13:54:31 (29660): Setting Graphics Controller Options for VM.
2025-04-17 13:54:31 (29660): Setting Boot Options for VM.
2025-04-17 13:54:32 (29660): Setting Network Configuration for NAT.
2025-04-17 13:54:32 (29660): Enabling VM Network Access.
2025-04-17 13:54:32 (29660): Disabling USB Support for VM.
2025-04-17 13:54:32 (29660): Disabling COM Port Support for VM.
2025-04-17 13:54:33 (29660): Disabling LPT Port Support for VM.
2025-04-17 13:54:33 (29660): Disabling Audio Support for VM.
2025-04-17 13:54:33 (29660): Disabling Clipboard Support for VM.
2025-04-17 13:54:33 (29660): Disabling Drag and Drop Support for VM.
2025-04-17 13:54:34 (29660): Adding storage controller(s) to VM.
2025-04-17 13:54:34 (29660): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 13:54:37 (29660): Adding VirtualBox Guest Additions to VM.
2025-04-17 13:54:37 (29660): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 13:54:37 (29660): forwarding host port 50492 to guest port 80
2025-04-17 13:54:37 (29660): Enabling remote desktop for VM.
2025-04-17 13:54:38 (29660): Required extension pack not installed, remote desktop not enabled.
2025-04-17 13:54:38 (29660): Enabling shared directory for VM.
2025-04-17 13:54:38 (29660): Starting VM using VBoxManage interface. (boinc_d1d7043c463c1564, slot#3)
2025-04-17 13:54:43 (29660): Successfully started VM. (PID = '34720')
2025-04-17 13:54:43 (29660): Reporting VM Process ID to BOINC.
2025-04-17 13:54:43 (29660): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-17 13:54:43 (29660): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 13:54:43 (29660): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 13:54:43 (29660): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 13:54:43 (29660): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 13:54:43 (29660): Detected: Web Application Enabled (http://localhost:50492)
2025-04-17 13:54:43 (29660): Preference change detected
2025-04-17 13:54:43 (29660): Setting CPU throttle for VM. (100%)
2025-04-17 13:54:43 (29660): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 13:54:45 (29660): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 13:54:45 (29660): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 13:54:48 (29660): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 13:54:48 (29660): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 13:54:48 (29660): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 13:54:54 (29660): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 13:54:54 (29660): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 13:54:58 (29660): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 13:54:58 (29660): Guest Log: 00:00:00.000150 main     Log opened 2025-04-17T13:54:56.419942000Z
2025-04-17 13:54:58 (29660): Guest Log: 00:00:00.000240 main     OS Product: Linux
2025-04-17 13:54:58 (29660): Guest Log: 00:00:00.000272 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 13:54:58 (29660): Guest Log: 00:00:00.000295 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 13:54:58 (29660): Guest Log: 00:00:00.000313 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 13:54:58 (29660): Guest Log: 00:00:00.000314 main     Process ID: 1364
2025-04-17 13:54:58 (29660): Guest Log: 00:00:00.000314 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 13:54:58 (29660): Guest Log: 00:00:00.001038 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 13:54:58 (29660): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 13:54:58 (29660): Guest Log: [INFO] Mounting shared directory
2025-04-17 13:54:58 (29660): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 13:55:01 (29660): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 13:55:01 (29660): Guest Log: [INFO] Detected branch: prod
2025-04-17 13:55:01 (29660): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 13:55:01 (29660): Guest Log: Copying input files
2025-04-17 13:55:02 (29660): Guest Log: Copied input files into RunAtlas.
2025-04-17 13:55:03 (29660): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-17 13:55:03 (29660): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-17 13:55:03 (29660): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-17 13:55:03 (29660): Guest Log: Further information can be found at the LHC@home message board.
2025-04-17 13:55:08 (29660): Guest Log: 00:00:10.004526 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 668 500 000ns (GuestNow=1 744 916 108 091 327 000 ns GuestLast=1 744 898 096 422 827 000 ns fSetTimeLastLoop=true )
2025-04-17 13:55:11 (29660): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 13:55:12 (29660): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 13:55:12 (29660): Guest Log: 2.6.3.0 1644 0 30140 144975 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-17 13:55:12 (29660): Guest Log: copied the webapp to /var/www
2025-04-17 13:55:12 (29660): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-17 13:55:12 (29660): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-17 13:55:12 (29660): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 13:55:12 (29660): Guest Log:  *** Starting ATLAS job. (PandaID=6605180235 taskID=44075483) ***
2025-04-17 15:21:19 (29660): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 18:04:02 (29660): Guest Log: 01:26:19.995870 timesync vgsvcTimeSyncWorker: Radical host time change: 9 763 782 000 000ns (HostNow=1 744 931 001 207 000 000 ns HostLast=1 744 921 237 425 000 000 ns)
2025-04-17 18:04:02 (29660): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 18:04:07 (29660): Guest Log: 01:26:29.996472 timesync vgsvcTimeSyncWorker: Radical guest time change: 9 733 125 251 000ns (GuestNow=1 744 931 011 207 777 000 ns GuestLast=1 744 921 278 082 526 000 ns fSetTimeLastLoop=true )
2025-04-17 18:15:41 (29660): Guest Log:  *** Job finished ***
2025-04-17 18:15:41 (29660): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:14:56,923 | INFO     | [data] copytool_out thread has finished
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:14:57,068 | INFO     | [payload] validate_post thread has finished
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:14:58,699 | INFO     | [data] queue_monitor thread has finished
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:14:59,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139912115140416)>', '<ExcThread(monitor, started 139911277557504)>']
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:00,657 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:00,658 | INFO     | [monitor] control thread has ended
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:04,964 | INFO     | all workflow threads have been joined
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:04,965 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:04,965 | INFO     | traces error code: 0
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:04,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:05,036 [wrapper] ==== pilot stdout END ====
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:05,039 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:05,042 [wrapper] pilotpid: 6010
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:05,044 [wrapper] Pilot exit status: 0
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:05,258 [wrapper] pandaids: 6605180235
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:05,280 [wrapper] cleanup supervisor_pilot  4601 6011
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:05,283 [wrapper] Test setup, not cleaning
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:05,287 [wrapper] apfmon messages muted
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:05,289 [wrapper] ==== wrapper stdout END ====
2025-04-17 18:15:41 (29660): Guest Log: 2025-04-17 23:15:05,291 [wrapper] ==== wrapper stderr END ====
2025-04-17 18:15:41 (29660): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 18:15:41 (29660): Guest Log:     "exeErrorCode": 0,
2025-04-17 18:15:41 (29660): Guest Log:     "exeErrorDiag": "",
2025-04-17 18:15:41 (29660): Guest Log:     "pilotErrorCode": 0,
2025-04-17 18:15:41 (29660): Guest Log:     "pilotErrorDiag": "",
2025-04-17 18:15:41 (29660): Guest Log:  *** Listing of results directory ***
2025-04-17 18:15:41 (29660): Guest Log: total 190996
2025-04-17 18:15:41 (29660): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 08:41 pilot3.tar.gz
2025-04-17 18:15:41 (29660): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 08:48 queuedata.json
2025-04-17 18:15:41 (29660): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 08:48 runpilot2-wrapper.sh
2025-04-17 18:15:41 (29660): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 18:55 start_atlas.sh
2025-04-17 18:15:41 (29660): Guest Log: -rwxr-xr-x. 1 atlas atlas    508893 Apr 17 18:55 input.tar.gz
2025-04-17 18:15:41 (29660): Guest Log: -rwxr-xr-x. 1 atlas atlas      9297 Apr 17 18:55 init_data.xml
2025-04-17 18:15:41 (29660): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 18:55 EVNT.44075481._002074.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 18:15:41 (29660): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 17 18:55 pandaJob.out
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 18:55 setup.sh.local
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas    990274 Apr 17 18:55 agis_schedconf.cvmfs.json
2025-04-17 18:15:41 (29660): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 18:56 pilot3
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas 190117105 Apr 17 23:14 HITS.44075483._053214.pool.root.1
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas      1024 Apr 17 23:14 memory_monitor_summary.json
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas        97 Apr 17 23:14 pilot_heartbeat.json
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 17 23:14 agis_ddmendpoints.agis.ALL.json
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas    323882 Apr 17 23:14 log.44075483._053214.job.log.tgz.1
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas      7709 Apr 17 23:14 heartbeat.json
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 17 23:15 pilotlog.txt
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas    509725 Apr 17 23:15 log.44075483._053214.job.log.1
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 23:15 output.list
2025-04-17 18:15:41 (29660): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 23:15 runtime_log
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas    849920 Apr 17 23:15 result.tar.gz
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas       655 Apr 17 23:15 tOOODmR6ZP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmYm3KDmQ15nkm.diag
2025-04-17 18:15:41 (29660): Guest Log: -rw-r--r--. 1 atlas atlas     10942 Apr 17 23:15 runtime_log.err
2025-04-17 18:15:41 (29660): Guest Log: Looking for outputfile HITS.44075483._053214.pool.root.1
2025-04-17 18:15:41 (29660): Guest Log: HITS file was successfully produced
2025-04-17 18:15:41 (29660): Guest Log: -rw-------. 1 atlas atlas 190117105 Apr 17 23:14 /home/atlas/RunAtlas/HITS.44075483._053214.pool.root.1
2025-04-17 18:15:42 (29660): Guest Log: Successfully finished the ATLAS job!
2025-04-17 18:15:42 (29660): Guest Log: Copying the results back to the shared directory!
2025-04-17 18:15:42 (29660): Guest Log:  *** Contents of shared directory: ***
2025-04-17 18:15:42 (29660): Guest Log: total 404100
2025-04-17 18:15:42 (29660): Guest Log: -rwxrwxrwx. 1 root root 222279108 Apr 17 18:54 ATLAS.root_0
2025-04-17 18:15:42 (29660): Guest Log: -rwxrwxrwx. 1 root root 190117105 Apr 17  2025 HITS.pool.root.1
2025-04-17 18:15:42 (29660): Guest Log: -rwxrwxrwx. 1 root root      9297 Apr 17 18:54 init_data.xml
2025-04-17 18:15:42 (29660): Guest Log: -rwxrwxrwx. 1 root root    508893 Apr 17 11:38 input.tar.gz
2025-04-17 18:15:42 (29660): Guest Log: -rwxrwxrwx. 1 root root    849920 Apr 17  2025 result.tar.gz
2025-04-17 18:15:42 (29660): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 11:38 start_atlas.sh
2025-04-17 18:15:42 (29660): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 18:15:42 (29660): VM Completion File Detected.
2025-04-17 18:15:42 (29660): Powering off VM.
2025-04-17 18:15:42 (29660): Successfully stopped VM.
2025-04-17 18:15:42 (29660): Deregistering VM. (boinc_d1d7043c463c1564, slot#3)
2025-04-17 18:15:42 (29660): Removing network bandwidth throttle group from VM.
2025-04-17 18:15:43 (29660): Removing VM from VirtualBox.
18:15:48 (29660): called boinc_finish(0)

</stderr_txt>
]]>

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