Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 19:16:04 (13000): Detected: vboxwrapper 26206
2025-04-17 19:16:04 (13000): Detected: BOINC client v7.24.1
2025-04-17 19:16:05 (13000): Detected: VirtualBox VboxManage Interface (Version: 7.0.10)
2025-04-17 19:16:06 (13000): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 19:16:06 (13000): Create VM. (boinc_dc93aba5dbf8f991, slot#0)
2025-04-17 19:16:07 (13000): Setting Memory Size for VM. (4800MB)
2025-04-17 19:16:07 (13000): Setting CPU Count for VM. (8)
2025-04-17 19:16:07 (13000): Setting Chipset Options for VM.
2025-04-17 19:16:07 (13000): Setting Graphics Controller Options for VM.
2025-04-17 19:16:08 (13000): Setting Boot Options for VM.
2025-04-17 19:16:08 (13000): Setting Network Configuration for NAT.
2025-04-17 19:16:08 (13000): Enabling VM Network Access.
2025-04-17 19:16:08 (13000): Disabling USB Support for VM.
2025-04-17 19:16:09 (13000): Disabling COM Port Support for VM.
2025-04-17 19:16:09 (13000): Disabling LPT Port Support for VM.
2025-04-17 19:16:09 (13000): Disabling Audio Support for VM.
2025-04-17 19:16:09 (13000): Disabling Clipboard Support for VM.
2025-04-17 19:16:10 (13000): Disabling Drag and Drop Support for VM.
2025-04-17 19:16:10 (13000): Adding storage controller(s) to VM.
2025-04-17 19:16:10 (13000): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 19:16:13 (13000): Adding VirtualBox Guest Additions to VM.
2025-04-17 19:16:13 (13000): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 19:16:14 (13000): forwarding host port 50987 to guest port 80
2025-04-17 19:16:14 (13000): Enabling remote desktop for VM.
2025-04-17 19:16:14 (13000): Required extension pack not installed, remote desktop not enabled.
2025-04-17 19:16:14 (13000): Enabling shared directory for VM.
2025-04-17 19:16:15 (13000): Starting VM using VBoxManage interface. (boinc_dc93aba5dbf8f991, slot#0)
2025-04-17 19:16:20 (13000): Successfully started VM. (PID = '8348')
2025-04-17 19:16:20 (13000): Reporting VM Process ID to BOINC.
2025-04-17 19:16:20 (13000): Guest Log: BIOS: VirtualBox 7.0.10
2025-04-17 19:16:20 (13000): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 19:16:20 (13000): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 19:16:20 (13000): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 19:16:20 (13000): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 19:16:20 (13000): Detected: Web Application Enabled (http://localhost:50987)
2025-04-17 19:16:20 (13000): Preference change detected
2025-04-17 19:16:20 (13000): Setting CPU throttle for VM. (100%)
2025-04-17 19:16:20 (13000): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 19:16:22 (13000): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 19:16:22 (13000): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 19:16:24 (13000): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 19:16:24 (13000): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 19:16:24 (13000): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 19:16:32 (13000): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 19:16:32 (13000): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 19:16:36 (13000): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 19:16:36 (13000): Guest Log: 00:00:00.000098 main     Log opened 2025-04-17T19:16:34.355662000Z
2025-04-17 19:16:36 (13000): Guest Log: 00:00:00.000157 main     OS Product: Linux
2025-04-17 19:16:36 (13000): Guest Log: 00:00:00.000178 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 19:16:36 (13000): Guest Log: 00:00:00.000194 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 19:16:36 (13000): Guest Log: 00:00:00.000210 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 19:16:36 (13000): Guest Log: 00:00:00.000211 main     Process ID: 1370
2025-04-17 19:16:36 (13000): Guest Log: 00:00:00.000211 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 19:16:36 (13000): Guest Log: 00:00:00.001732 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 19:16:36 (13000): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 19:16:36 (13000): Guest Log: [INFO] Mounting shared directory
2025-04-17 19:16:36 (13000): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 19:16:45 (13000): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 19:16:45 (13000): Guest Log: [INFO] Detected branch: prod
2025-04-17 19:16:46 (13000): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 19:16:46 (13000): Guest Log: Copying input files
2025-04-17 19:16:46 (13000): Guest Log: 00:00:10.003414 timesync vgsvcTimeSyncWorker: Radical guest time change: -32 388 125 462 000ns (GuestNow=1 744 885 006 233 234 000 ns GuestLast=1 744 917 394 358 696 000 ns fSetTimeLastLoop=true )
2025-04-17 19:16:48 (13000): Guest Log: Copied input files into RunAtlas.
2025-04-17 19:16:48 (13000): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-17 19:16:48 (13000): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-17 19:16:48 (13000): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-17 19:16:48 (13000): Guest Log: Further information can be found at the LHC@home message board.
2025-04-17 19:16:59 (13000): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 19:16:59 (13000): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 19:16:59 (13000): Guest Log: 2.6.3.0 1651 0 32176 144961 4 1 3117322 4096000 0 65024 0 0 n/a 1 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-17 19:17:00 (13000): Guest Log: copied the webapp to /var/www
2025-04-17 19:17:00 (13000): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-17 19:17:00 (13000): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-17 19:17:01 (13000): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 19:17:01 (13000): Guest Log:  *** Starting ATLAS job. (PandaID=6605082791 taskID=44075483) ***
2025-04-17 20:57:04 (13000): Status Report: Elapsed Time: '6000.000000'
2025-04-17 20:57:04 (13000): Status Report: CPU Time: '33100.328125'
2025-04-17 22:00:17 (13000): Guest Log:  *** Job finished ***
2025-04-17 22:00:17 (13000): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:00,678 | INFO     | [data] queue_monitor thread has finished
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:07,099 | INFO     | job.realtimelogging is not enabled
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:08,177 | INFO     | [payload] run_realtimelog thread has finished
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:09,525 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139628100937536)>', '<ExcThread(monitor, started 139627432240896)>']
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:10,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:10,186 | INFO     | [monitor] control thread has ended
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:14,531 | INFO     | all workflow threads have been joined
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:14,531 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:14,531 | INFO     | traces error code: 0
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:14,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:14,596 [wrapper] ==== pilot stdout END ====
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:14,600 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:14,603 [wrapper] pilotpid: 6040
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:14,606 [wrapper] Pilot exit status: 0
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:15,527 [wrapper] pandaids: 6605082791
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:15,555 [wrapper] cleanup supervisor_pilot  6239 6041
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:15,559 [wrapper] Test setup, not cleaning
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:15,565 [wrapper] apfmon messages muted
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:15,568 [wrapper] ==== wrapper stdout END ====
2025-04-17 22:00:17 (13000): Guest Log: 2025-04-17 13:00:15,571 [wrapper] ==== wrapper stderr END ====
2025-04-17 22:00:17 (13000): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 22:00:17 (13000): Guest Log:     "exeErrorCode": 0,
2025-04-17 22:00:17 (13000): Guest Log:     "exeErrorDiag": "",
2025-04-17 22:00:17 (13000): Guest Log:     "pilotErrorCode": 0,
2025-04-17 22:00:17 (13000): Guest Log:     "pilotErrorDiag": "",
2025-04-17 22:00:17 (13000): Guest Log:  *** Listing of results directory ***
2025-04-17 22:00:17 (13000): Guest Log: total 207072
2025-04-17 22:00:17 (13000): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 07:08 pilot3.tar.gz
2025-04-17 22:00:17 (13000): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 07:20 queuedata.json
2025-04-17 22:00:17 (13000): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 07:22 runpilot2-wrapper.sh
2025-04-17 22:00:17 (13000): Guest Log: -rwxr-xr-x. 1 atlas atlas      6090 Apr 17 10:16 init_data.xml
2025-04-17 22:00:17 (13000): Guest Log: -rwxr-xr-x. 1 atlas atlas    508893 Apr 17 10:16 input.tar.gz
2025-04-17 22:00:17 (13000): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 10:16 start_atlas.sh
2025-04-17 22:00:17 (13000): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 10:16 EVNT.44075481._002037.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 22:00:17 (13000): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 17 10:17 pandaJob.out
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 10:17 setup.sh.local
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 17 10:21 agis_ddmendpoints.agis.ALL.json
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas    990271 Apr 17 10:22 agis_schedconf.cvmfs.json
2025-04-17 22:00:17 (13000): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 10:22 pilot3
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas 205996207 Apr 17 12:59 HITS.44075483._052231.pool.root.1
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas      1031 Apr 17 12:59 memory_monitor_summary.json
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas        95 Apr 17 12:59 pilot_heartbeat.json
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas    340361 Apr 17 12:59 log.44075483._052231.job.log.tgz.1
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas      7733 Apr 17 12:59 heartbeat.json
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas      4485 Apr 17 13:00 pilotlog.txt
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas    786289 Apr 17 13:00 log.44075483._052231.job.log.1
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 13:00 output.list
2025-04-17 22:00:17 (13000): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 13:00 runtime_log
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas   1146880 Apr 17 13:00 result.tar.gz
2025-04-17 22:00:17 (13000): Guest Log: -rw-r--r--. 1 atlas atlas     10953 Apr 17 13:00 runtime_log.err
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas       659 Apr 17 13:00 2AxKDmxkYP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmDLcLDmbmkqNo.diag
2025-04-17 22:00:17 (13000): Guest Log: Looking for outputfile HITS.44075483._052231.pool.root.1
2025-04-17 22:00:17 (13000): Guest Log: HITS file was successfully produced
2025-04-17 22:00:17 (13000): Guest Log: -rw-------. 1 atlas atlas 205996207 Apr 17 12:59 /home/atlas/RunAtlas/HITS.44075483._052231.pool.root.1
2025-04-17 22:00:18 (13000): Guest Log: Successfully finished the ATLAS job!
2025-04-17 22:00:18 (13000): Guest Log: Copying the results back to the shared directory!
2025-04-17 22:00:18 (13000): Guest Log:  *** Contents of shared directory: ***
2025-04-17 22:00:18 (13000): Guest Log: total 420436
2025-04-17 22:00:18 (13000): Guest Log: -rwxrwxrwx. 1 root root 222837032 Apr 17 10:16 ATLAS.root_0
2025-04-17 22:00:18 (13000): Guest Log: -rwxrwxrwx. 1 root root 205996207 Apr 17 13:00 HITS.pool.root.1
2025-04-17 22:00:18 (13000): Guest Log: -rwxrwxrwx. 1 root root      6090 Apr 17 10:16 init_data.xml
2025-04-17 22:00:18 (13000): Guest Log: -rwxrwxrwx. 1 root root    508893 Apr 17 10:15 input.tar.gz
2025-04-17 22:00:18 (13000): Guest Log: -rwxrwxrwx. 1 root root   1146880 Apr 17 13:00 result.tar.gz
2025-04-17 22:00:18 (13000): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 10:15 start_atlas.sh
2025-04-17 22:00:18 (13000): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 22:00:18 (13000): VM Completion File Detected.
2025-04-17 22:00:18 (13000): Powering off VM.
2025-04-17 22:00:18 (13000): Successfully stopped VM.
2025-04-17 22:00:18 (13000): Deregistering VM. (boinc_dc93aba5dbf8f991, slot#0)
2025-04-17 22:00:18 (13000): Removing network bandwidth throttle group from VM.
2025-04-17 22:00:19 (13000): Removing VM from VirtualBox.
22:00:24 (13000): called boinc_finish(0)

</stderr_txt>
]]>

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