Stderr output

<core_client_version>8.2.0</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 11:41:20 (20920): Detected: vboxwrapper 26206
2025-04-17 11:41:20 (20920): Detected: BOINC client v8.2.0
2025-04-17 11:41:21 (20920): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-17 11:41:21 (20920): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 11:41:22 (20920): Create VM. (boinc_ae190f11be72a616, slot#30)
2025-04-17 11:41:22 (20920): Setting Memory Size for VM. (4096MB)
2025-04-17 11:41:23 (20920): Setting CPU Count for VM. (1)
2025-04-17 11:41:23 (20920): Setting Chipset Options for VM.
2025-04-17 11:41:23 (20920): Setting Graphics Controller Options for VM.
2025-04-17 11:41:23 (20920): Setting Boot Options for VM.
2025-04-17 11:41:24 (20920): Setting Network Configuration for NAT.
2025-04-17 11:41:24 (20920): Enabling VM Network Access.
2025-04-17 11:41:24 (20920): Disabling USB Support for VM.
2025-04-17 11:41:24 (20920): Disabling COM Port Support for VM.
2025-04-17 11:41:25 (20920): Disabling LPT Port Support for VM.
2025-04-17 11:41:25 (20920): Disabling Audio Support for VM.
2025-04-17 11:41:25 (20920): Disabling Clipboard Support for VM.
2025-04-17 11:41:25 (20920): Disabling Drag and Drop Support for VM.
2025-04-17 11:41:26 (20920): Adding storage controller(s) to VM.
2025-04-17 11:41:26 (20920): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 11:41:26 (20920): Adding VirtualBox Guest Additions to VM.
2025-04-17 11:41:27 (20920): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 11:41:27 (20920): forwarding host port 51014 to guest port 80
2025-04-17 11:41:27 (20920): Enabling remote desktop for VM.
2025-04-17 11:41:27 (20920): Required extension pack not installed, remote desktop not enabled.
2025-04-17 11:41:27 (20920): Enabling shared directory for VM.
2025-04-17 11:41:28 (20920): Starting VM using VBoxManage interface. (boinc_ae190f11be72a616, slot#30)
2025-04-17 11:41:33 (20920): Successfully started VM. (PID = '36364')
2025-04-17 11:41:33 (20920): Reporting VM Process ID to BOINC.
2025-04-17 11:41:33 (20920): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-17 11:41:33 (20920): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 11:41:33 (20920): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 11:41:33 (20920): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 11:41:33 (20920): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 11:41:33 (20920): Detected: Web Application Enabled (http://localhost:51014)
2025-04-17 11:41:33 (20920): Preference change detected
2025-04-17 11:41:33 (20920): Setting CPU throttle for VM. (100%)
2025-04-17 11:41:33 (20920): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 11:41:35 (20920): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 11:41:35 (20920): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 11:41:37 (20920): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 11:41:37 (20920): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 11:41:37 (20920): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 11:41:40 (20920): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 11:41:40 (20920): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 11:41:45 (20920): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 11:41:45 (20920): Guest Log: 00:00:00.000141 main     Log opened 2025-04-17T11:41:43.844651000Z
2025-04-17 11:41:45 (20920): Guest Log: 00:00:00.000269 main     OS Product: Linux
2025-04-17 11:41:45 (20920): Guest Log: 00:00:00.000289 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 11:41:45 (20920): Guest Log: 00:00:00.000303 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 11:41:45 (20920): Guest Log: 00:00:00.000318 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 11:41:45 (20920): Guest Log: 00:00:00.000318 main     Process ID: 1248
2025-04-17 11:41:45 (20920): Guest Log: 00:00:00.000319 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 11:41:45 (20920): Guest Log: 00:00:00.001496 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 11:41:45 (20920): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 11:41:45 (20920): Guest Log: [INFO] Mounting shared directory
2025-04-17 11:41:45 (20920): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 11:41:48 (20920): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 11:41:48 (20920): Guest Log: [INFO] Detected branch: prod
2025-04-17 11:41:48 (20920): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 11:41:48 (20920): Guest Log: Copying input files
2025-04-17 11:41:49 (20920): Guest Log: Copied input files into RunAtlas.
2025-04-17 11:41:49 (20920): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-04-17 11:41:55 (20920): Guest Log: 00:00:10.019842 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 888 225 000ns (GuestNow=1 744 882 914 968 052 000 ns GuestLast=1 744 890 103 856 277 000 ns fSetTimeLastLoop=true )
2025-04-17 11:41:57 (20920): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 11:41:57 (20920): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 11:41:57 (20920): Guest Log: 2.6.3.0 1517 0 31560 144958 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-04-17 11:41:57 (20920): Guest Log: copied the webapp to /var/www
2025-04-17 11:41:57 (20920): Guest Log: core_number=1
2025-04-17 11:41:57 (20920): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 11:41:57 (20920): Guest Log:  *** Starting ATLAS job. (PandaID=6604147995 taskID=44075483) ***
2025-04-17 13:21:35 (20920): Status Report: Elapsed Time: '6000.000000'
2025-04-17 13:21:35 (20920): Status Report: CPU Time: '5795.390625'
2025-04-17 15:01:38 (20920): Status Report: Elapsed Time: '12000.000000'
2025-04-17 15:01:38 (20920): Status Report: CPU Time: '11769.968750'
2025-04-17 16:41:40 (20920): Status Report: Elapsed Time: '18000.000000'
2025-04-17 16:41:40 (20920): Status Report: CPU Time: '17744.546875'
2025-04-17 18:21:43 (20920): Status Report: Elapsed Time: '24000.000000'
2025-04-17 18:21:43 (20920): Status Report: CPU Time: '23721.234375'
2025-04-17 18:48:30 (20920): Guest Log:  *** Job finished ***
2025-04-17 18:48:30 (20920): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:08,803 | INFO     | [data] queue_monitor thread has finished
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:13,243 | INFO     | job.realtimelogging is not enabled
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:14,245 | INFO     | [payload] run_realtimelog thread has finished
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:14,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139745420384064)>', '<ExcThread(monitor, started 139744973399808)>']
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:14,749 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:14,749 | INFO     | [monitor] control thread has ended
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,313 | INFO     | all workflow threads have been joined
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,313 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,313 | INFO     | traces error code: 0
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,313 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,430 [wrapper] ==== pilot stdout END ====
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,433 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,435 [wrapper] pilotpid: 5785
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,436 [wrapper] Pilot exit status: 0
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,447 [wrapper] pandaids: 6604147995
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,460 [wrapper] cleanup supervisor_pilot 31996 5786
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,462 [wrapper] Test setup, not cleaning
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,463 [wrapper] apfmon messages muted
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,465 [wrapper] ==== wrapper stdout END ====
2025-04-17 18:48:30 (20920): Guest Log: 2025-04-17 16:48:19,466 [wrapper] ==== wrapper stderr END ====
2025-04-17 18:48:30 (20920): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 18:48:30 (20920): Guest Log:     "exeErrorCode": 0,
2025-04-17 18:48:30 (20920): Guest Log:     "exeErrorDiag": "",
2025-04-17 18:48:30 (20920): Guest Log:     "pilotErrorCode": 0,
2025-04-17 18:48:30 (20920): Guest Log:     "pilotErrorDiag": "",
2025-04-17 18:48:30 (20920): Guest Log:  *** Listing of results directory ***
2025-04-17 18:48:30 (20920): Guest Log: total 197880
2025-04-17 18:48:30 (20920): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 16 15:58 pilot3.tar.gz
2025-04-17 18:48:30 (20920): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 16 16:13 runpilot2-wrapper.sh
2025-04-17 18:48:30 (20920): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 16 16:13 queuedata.json
2025-04-17 18:48:30 (20920): Guest Log: -rwxr-xr-x. 1 atlas atlas      9354 Apr 17 09:41 init_data.xml
2025-04-17 18:48:30 (20920): Guest Log: -rwxr-xr-x. 1 atlas atlas    508883 Apr 17 09:41 input.tar.gz
2025-04-17 18:48:30 (20920): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 09:41 start_atlas.sh
2025-04-17 18:48:30 (20920): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 09:41 EVNT.44075481._001663.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 18:48:30 (20920): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 17 09:41 pandaJob.out
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas       460 Apr 17 09:41 setup.sh.local
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas    990239 Apr 17 09:42 agis_schedconf.cvmfs.json
2025-04-17 18:48:30 (20920): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 09:42 pilot3
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas        95 Apr 17 16:47 pilot_heartbeat.json
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas 193521073 Apr 17 16:47 HITS.44075483._042480.pool.root.1
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas      1022 Apr 17 16:47 memory_monitor_summary.json
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 17 16:47 agis_ddmendpoints.agis.ALL.json
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas    393941 Apr 17 16:47 log.44075483._042480.job.log.tgz.1
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas      7672 Apr 17 16:48 heartbeat.json
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas      4608 Apr 17 16:48 pilotlog.txt
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas   2264854 Apr 17 16:48 log.44075483._042480.job.log.1
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 16:48 output.list
2025-04-17 18:48:30 (20920): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 16:48 runtime_log
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas   2672640 Apr 17 16:48 result.tar.gz
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas       657 Apr 17 16:48 zX2MDmaZKP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmaeaLDmzyj7on.diag
2025-04-17 18:48:30 (20920): Guest Log: -rw-r--r--. 1 atlas atlas     11174 Apr 17 16:48 runtime_log.err
2025-04-17 18:48:30 (20920): Guest Log: Looking for outputfile HITS.44075483._042480.pool.root.1
2025-04-17 18:48:30 (20920): Guest Log: HITS file was successfully produced
2025-04-17 18:48:30 (20920): Guest Log: -rw-------. 1 atlas atlas 193521073 Apr 17 16:47 /home/atlas/RunAtlas/HITS.44075483._042480.pool.root.1
2025-04-17 18:48:31 (20920): Guest Log: Successfully finished the ATLAS job!
2025-04-17 18:48:31 (20920): Guest Log: Copying the results back to the shared directory!
2025-04-17 18:48:31 (20920): Guest Log:  *** Contents of shared directory: ***
2025-04-17 18:48:31 (20920): Guest Log: total 413392
2025-04-17 18:48:31 (20920): Guest Log: -rwxrwxrwx. 1 root root 226568638 Apr 17 09:41 ATLAS.root_0
2025-04-17 18:48:31 (20920): Guest Log: -rwxrwxrwx. 1 root root 193521073 Apr 17  2025 HITS.pool.root.1
2025-04-17 18:48:31 (20920): Guest Log: -rwxrwxrwx. 1 root root      9354 Apr 17 09:41 init_data.xml
2025-04-17 18:48:31 (20920): Guest Log: -rwxrwxrwx. 1 root root    508883 Apr 17 09:40 input.tar.gz
2025-04-17 18:48:31 (20920): Guest Log: -rwxrwxrwx. 1 root root   2672640 Apr 17  2025 result.tar.gz
2025-04-17 18:48:31 (20920): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 09:40 start_atlas.sh
2025-04-17 18:48:31 (20920): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 18:48:31 (20920): VM Completion File Detected.
2025-04-17 18:48:31 (20920): Powering off VM.
2025-04-17 18:48:31 (20920): Successfully stopped VM.
2025-04-17 18:48:31 (20920): Deregistering VM. (boinc_ae190f11be72a616, slot#30)
2025-04-17 18:48:31 (20920): Removing network bandwidth throttle group from VM.
2025-04-17 18:48:31 (20920): Removing VM from VirtualBox.
18:48:37 (20920): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN