Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:57:32 (1612648): wrapper (7.7.26015): starting
08:57:32 (1612648): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 08:57:32] Arguments: --nthreads 10
[2025-04-17 08:57:32] Threads: 10
[2025-04-17 08:57:32] Checking for CVMFS
[2025-04-17 08:57:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 08:57:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 08:57:34] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 08:57:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 08:57:36] 2.12.6.0 1988508 151663 244184 144965 1 515 25370377 32935936 18158 130560 0 95319428 99.663 88042105 25281 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-17 08:57:36] CVMFS is ok
[2025-04-17 08:57:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 08:57:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 08:57:36] Further information can be found at the LHC@home message board.
[2025-04-17 08:57:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 08:57:36] Checking for apptainer binary...
[2025-04-17 08:57:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 08:57:36] Running /usr/bin/apptainer --version
[2025-04-17 08:57:36] apptainer version 1.4.0-1.el9
[2025-04-17 08:57:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 08:57:57] c-5-1.aglt2.org
[2025-04-17 08:57:57] apptainer works
[2025-04-17 08:57:57] Set ATHENA_PROC_NUMBER=10
[2025-04-17 08:57:57] Set ATHENA_CORE_NUMBER=10
[2025-04-17 08:57:57] Starting ATLAS job with PandaID=6604832161
[2025-04-17 08:57:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 02:23:39]  *** The last 200 lines of the pilot log: ***
[2025-04-18 02:23:39] 2025-04-18 06:23:02,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 02:23:39] 2025-04-18 06:23:04,383 | INFO     | 62661s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-18 02:23:39] 2025-04-18 06:23:05,200 | INFO     | monitor loop #3630: job 0:6604832161 is in state 'finished'
[2025-04-18 02:23:39] 2025-04-18 06:23:05,211 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 02:23:39] 2025-04-18 06:23:07,721 | INFO     | monitor loop #3631: job 0:6604832161 is in state 'finished'
[2025-04-18 02:23:39] 2025-04-18 06:23:07,721 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 02:23:39] 2025-04-18 06:23:10,228 | INFO     | monitor loop #3632: job 0:6604832161 is in state 'finished'
[2025-04-18 02:23:39] 2025-04-18 06:23:10,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 02:23:39] 2025-04-18 06:23:12,754 | INFO     | monitor loop #3633: job 0:6604832161 is in state 'finished'
[2025-04-18 02:23:39] 2025-04-18 06:23:12,754 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 02:23:39] 2025-04-18 06:23:15,273 | INFO     | monitor loop #3634: job 0:6604832161 is in state 'finished'
[2025-04-18 02:23:39] 2025-04-18 06:23:15,279 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 02:23:39] 2025-04-18 06:23:17,800 | INFO     | monitor loop #3635: job 0:6604832161 is in state 'finished'
[2025-04-18 02:23:39] 2025-04-18 06:23:17,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-18 02:23:39] 2025-04-18 06:23:18,068 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-18 02:23:39] 2025-04-18 06:23:18,069 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6604832161/memory_monitor_summary.json (trf name=prmon)
[2025-04-18 02:23:39] 2025-04-18 06:23:18,070 | INFO     | extracted standard info from prmon json
[2025-04-18 02:23:39] 2025-04-18 06:23:18,070 | INFO     | extracted standard memory fields from prmon json
[2025-04-18 02:23:39] 2025-04-18 06:23:18,070 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-18 02:23:39] 2025-04-18 06:23:18,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-18 02:23:39] 2025-04-18 06:23:18,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-18 02:23:39] 2025-04-18 06:23:18,245 | INFO     | fitting pss+swap vs Time
[2025-04-18 02:23:39] 2025-04-18 06:23:18,247 | INFO     | sum of square deviations: 333917641853.28174
[2025-04-18 02:23:39] 2025-04-18 06:23:18,279 | INFO     | sum of deviations: 1258105952054.114
[2025-04-18 02:23:39] 2025-04-18 06:23:18,280 | INFO     | mean x: 1744926099.4692683
[2025-04-18 02:23:39] 2025-04-18 06:23:18,280 | INFO     | mean y: 2146007.956097561
[2025-04-18 02:23:39] 2025-04-18 06:23:18,280 | INFO     | -- intersect: -6572235325.8742285
[2025-04-18 02:23:39] 2025-04-18 06:23:18,280 | INFO     | intersect: -6572235325.8742285
[2025-04-18 02:23:39] 2025-04-18 06:23:18,282 | INFO     | chi2: 12.54735082295972
[2025-04-18 02:23:39] 2025-04-18 06:23:18,283 | INFO     | sum of square deviations: 329054744666.05786
[2025-04-18 02:23:39] 2025-04-18 06:23:18,313 | INFO     | sum of deviations: 1391981020312.9463
[2025-04-18 02:23:39] 2025-04-18 06:23:18,314 | INFO     | mean x: 1744925946.9696078
[2025-04-18 02:23:39] 2025-04-18 06:23:18,314 | INFO     | mean y: 2150197.062745098
[2025-04-18 02:23:39] 2025-04-18 06:23:18,314 | INFO     | -- intersect: -7379307871.558234
[2025-04-18 02:23:39] 2025-04-18 06:23:18,314 | INFO     | intersect: -7379307871.558234
[2025-04-18 02:23:39] 2025-04-18 06:23:18,315 | INFO     | chi2: 11.010362589833308
[2025-04-18 02:23:39] 2025-04-18 06:23:18,316 | INFO     | current chi2=11.010362589833308 (change=12.249503937627694 %)
[2025-04-18 02:23:39] 2025-04-18 06:23:18,316 | INFO     | right removable region: 1019
[2025-04-18 02:23:39] 2025-04-18 06:23:18,318 | INFO     | sum of square deviations: 329054576062.17554
[2025-04-18 02:23:39] 2025-04-18 06:23:18,351 | INFO     | sum of deviations: 1008539542424.2697
[2025-04-18 02:23:39] 2025-04-18 06:23:18,351 | INFO     | mean x: 1744926251.9715686
[2025-04-18 02:23:39] 2025-04-18 06:23:18,351 | INFO     | mean y: 2153830.905882353
[2025-04-18 02:23:39] 2025-04-18 06:23:18,351 | INFO     | -- intersect: -5345977609.135173
[2025-04-18 02:23:39] 2025-04-18 06:23:18,351 | INFO     | intersect: -5345977609.135173
[2025-04-18 02:23:39] 2025-04-18 06:23:18,353 | INFO     | chi2: 9.599532507545696
[2025-04-18 02:23:39] 2025-04-18 06:23:18,353 | INFO     | current chi2=9.599532507545696 (change=23.49355140385467 %)
[2025-04-18 02:23:39] 2025-04-18 06:23:18,353 | INFO     | left removable region: 10
[2025-04-18 02:23:39] 2025-04-18 06:23:18,380 | INFO     | sum of square deviations: 318522792469.5536
[2025-04-18 02:23:39] 2025-04-18 06:23:18,512 | INFO     | sum of deviations: 976486344047.7213
[2025-04-18 02:23:39] 2025-04-18 06:23:18,512 | INFO     | mean x: 1744926221.4737363
[2025-04-18 02:23:39] 2025-04-18 06:23:18,512 | INFO     | mean y: 2163856.2913776017
[2025-04-18 02:23:39] 2025-04-18 06:23:18,512 | INFO     | -- intersect: -5347207262.269195
[2025-04-18 02:23:39] 2025-04-18 06:23:18,512 | INFO     | intersect: -5347207262.269195
[2025-04-18 02:23:39] 2025-04-18 06:23:18,514 | INFO     | chi2: 6.688314686153224
[2025-04-18 02:23:39] 2025-04-18 06:23:18,514 | INFO     | -- intersect: -5347207262.269195
[2025-04-18 02:23:39] 2025-04-18 06:23:18,514 | INFO     | current memory leak: 3.07 B/s (using 1009 data points, chi2=6.69)
[2025-04-18 02:23:39] 2025-04-18 06:23:18,515 | INFO     | ..............................
[2025-04-18 02:23:39] 2025-04-18 06:23:18,516 | INFO     | . Timing measurements:
[2025-04-18 02:23:39] 2025-04-18 06:23:18,516 | INFO     | . get job = 0 s
[2025-04-18 02:23:39] 2025-04-18 06:23:18,516 | INFO     | . initial setup = 4 s
[2025-04-18 02:23:39] 2025-04-18 06:23:18,516 | INFO     | . payload setup = 43 s
[2025-04-18 02:23:39] 2025-04-18 06:23:18,516 | INFO     | . stage-in = 0 s
[2025-04-18 02:23:39] 2025-04-18 06:23:18,517 | INFO     | . payload execution = 62492 s
[2025-04-18 02:23:39] 2025-04-18 06:23:18,517 | INFO     | . stage-out = 7 s
[2025-04-18 02:23:39] 2025-04-18 06:23:18,517 | INFO     | . log creation = 2 s
[2025-04-18 02:23:39] 2025-04-18 06:23:18,517 | INFO     | ..............................
[2025-04-18 02:23:39] 2025-04-18 06:23:19,658 | INFO     | 
[2025-04-18 02:23:39] 2025-04-18 06:23:19,658 | INFO     | job summary report
[2025-04-18 02:23:39] 2025-04-18 06:23:19,659 | INFO     | --------------------------------------------------
[2025-04-18 02:23:39] 2025-04-18 06:23:19,659 | INFO     | PanDA job id: 6604832161
[2025-04-18 02:23:39] 2025-04-18 06:23:19,659 | INFO     | task id: 44075483
[2025-04-18 02:23:39] 2025-04-18 06:23:19,659 | INFO     | errors: (none)
[2025-04-18 02:23:39] 2025-04-18 06:23:19,659 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 02:23:39] 2025-04-18 06:23:19,659 | INFO     | pilot state: finished 
[2025-04-18 02:23:39] 2025-04-18 06:23:19,659 | INFO     | transexitcode: 0
[2025-04-18 02:23:39] 2025-04-18 06:23:19,659 | INFO     | exeerrorcode: 0
[2025-04-18 02:23:39] 2025-04-18 06:23:19,659 | INFO     | exeerrordiag: 
[2025-04-18 02:23:39] 2025-04-18 06:23:19,659 | INFO     | exitcode: 0
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | exitmsg: OK
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | cpuconsumptiontime: 52353 s
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | nevents: 400
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | neventsw: 0
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | pid: 1635773
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | pgrp: 1635773
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | corecount: 10
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | event service: False
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | sizes: {0: 2426653, 2: 2426681, 3: 2426681, 4: 2426852, 5: 2426880, 16: 2426936, 27: 2427092, 35: 2427326, 39: 2427354, 62540: 2478502, 62548: 2487443, 62551: 2487
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | --------------------------------------------------
[2025-04-18 02:23:39] 2025-04-18 06:23:19,660 | INFO     | 
[2025-04-18 02:23:39] 2025-04-18 06:23:19,661 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-18 02:23:39] 2025-04-18 06:23:19,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,926 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,926 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,926 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 02:23:39] 2025-04-18 06:23:19,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 02:23:39] 2025-04-18 06:23:19,927 | INFO     | job 6604832161 has completed (purged errors)
[2025-04-18 02:23:39] 2025-04-18 06:23:19,927 | INFO     | overall cleanup function is called
[2025-04-18 02:23:39] 2025-04-18 06:23:21,051 | INFO     | --- collectZombieJob: --- 10, [1635773]
[2025-04-18 02:23:39] 2025-04-18 06:23:21,051 | INFO     | zombie collector waiting for pid 1635773
[2025-04-18 02:23:39] 2025-04-18 06:23:21,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 02:23:39] 2025-04-18 06:23:21,052 | INFO     | collected zombie processes
[2025-04-18 02:23:39] 2025-04-18 06:23:21,052 | INFO     | will attempt to kill all subprocesses of pid=1635773
[2025-04-18 02:23:39] 2025-04-18 06:23:23,542 | INFO     | PID=1622312 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-18 02:23:39] 2025-04-18 06:23:23,542 | INFO     | .. there are 41 such processes running
[2025-04-18 02:23:39] 2025-04-18 06:23:23,600 | INFO     | process IDs to be killed: [1635773] (in reverse order)
[2025-04-18 02:23:39] 2025-04-18 06:23:23,743 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 02:23:39] 2025-04-18 06:23:23,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 02:23:39] 2025-04-18 06:23:23,860 | INFO     | did not find any defunct processes belonging to 1635773
[2025-04-18 02:23:39] 2025-04-18 06:23:23,968 | INFO     | did not find any defunct processes belonging to 1635773
[2025-04-18 02:23:39] 2025-04-18 06:23:23,969 | INFO     | ready for new job
[2025-04-18 02:23:39] 2025-04-18 06:23:23,969 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 02:23:39] 2025-04-18 06:23:23,995 | INFO     | **************************************
[2025-04-18 02:23:39] 2025-04-18 06:23:23,995 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 02:23:39] 2025-04-18 06:23:23,995 | INFO     | **************************************
[2025-04-18 02:23:39] 2025-04-18 06:23:23,995 | INFO     | 
[2025-04-18 02:23:39] 2025-04-18 06:23:23,997 | INFO     | architecture information:
[2025-04-18 02:23:39] 2025-04-18 06:23:24,067 | INFO     | executing command: cat /etc/os-release
[2025-04-18 02:23:39] 2025-04-18 06:23:24,220 | INFO     | cat /etc/os-release:
[2025-04-18 02:23:39] NAME="CentOS Linux"
[2025-04-18 02:23:39] VERSION="7 (Core)"
[2025-04-18 02:23:39] ID="centos"
[2025-04-18 02:23:39] ID_LIKE="rhel fedora"
[2025-04-18 02:23:39] VERSION_ID="7"
[2025-04-18 02:23:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 02:23:39] ANSI_COLOR="0;31"
[2025-04-18 02:23:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 02:23:39] HOME_URL="https://www.centos.org/"
[2025-04-18 02:23:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 02:23:39] 
[2025-04-18 02:23:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 02:23:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 02:23:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 02:23:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 02:23:39] 
[2025-04-18 02:23:39] 2025-04-18 06:23:24,221 | INFO     | **************************************
[2025-04-18 02:23:39] 2025-04-18 06:23:24,725 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-18 02:23:39] 2025-04-18 06:23:24,747 | INFO     | sufficient remaining disk space (75694604288 B)
[2025-04-18 02:23:39] 2025-04-18 06:23:24,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 02:23:39] 2025-04-18 06:23:24,747 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 02:23:39] 2025-04-18 06:23:24,747 | INFO     | update_server=False
[2025-04-18 02:23:39] 2025-04-18 06:23:24,747 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 02:23:39] 2025-04-18 06:23:24,748 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 02:23:39] 2025-04-18 06:23:24,748 | INFO     | aborting loop
[2025-04-18 02:23:39] 2025-04-18 06:23:24,749 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 02:23:39] 2025-04-18 06:23:24,769 | INFO     | all payload control threads have been joined
[2025-04-18 02:23:39] 2025-04-18 06:23:24,881 | INFO     | all job control threads have been joined
[2025-04-18 02:23:39] 2025-04-18 06:23:25,555 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 02:23:39] 2025-04-18 06:23:25,556 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 02:23:39] 2025-04-18 06:23:25,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 02:23:39] 2025-04-18 06:23:25,753 | INFO     | [job] retrieve thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:25,759 | INFO     | [job] job monitor thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:25,775 | INFO     | [payload] control thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:25,777 | INFO     | [job] queue monitor thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:25,824 | INFO     | all data control threads have been joined
[2025-04-18 02:23:39] 2025-04-18 06:23:25,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 02:23:39] 2025-04-18 06:23:25,888 | INFO     | [job] control thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:25,927 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:25,928 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:25,928 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:26,185 | INFO     | [data] copytool_in thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:26,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 02:23:39] 2025-04-18 06:23:26,370 | INFO     | [payload] failed_post thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:26,831 | INFO     | [data] control thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:26,977 | INFO     | [job] validate thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:27,132 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:27,167 | INFO     | [payload] validate_post thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:27,857 | INFO     | [data] copytool_out thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:30,244 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 02:23:39] 2025-04-18 06:23:31,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140330312927040)>', '<ExcThread(monitor, started 140329969760000)>']
[2025-04-18 02:23:39] 2025-04-18 06:23:32,623 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 02:23:39] 2025-04-18 06:23:32,623 | INFO     | [monitor] control thread has ended
[2025-04-18 02:23:39] 2025-04-18 06:23:36,964 | INFO     | all workflow threads have been joined
[2025-04-18 02:23:39] 2025-04-18 06:23:36,964 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 02:23:39] 2025-04-18 06:23:36,965 | INFO     | traces error code: 0
[2025-04-18 02:23:39] 2025-04-18 06:23:36,965 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 02:23:39] 2025-04-18 06:23:37,360 [wrapper] ==== pilot stdout END ====
[2025-04-18 02:23:39] 2025-04-18 06:23:37,363 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 02:23:39] 2025-04-18 06:23:37,380 [wrapper] pilotpid: 1622312
[2025-04-18 02:23:39] 2025-04-18 06:23:37,446 [wrapper] Pilot exit status: 0
[2025-04-18 02:23:39] 2025-04-18 06:23:37,583 [wrapper] pandaids: 6604832161
[2025-04-18 02:23:39] 2025-04-18 06:23:38,346 [wrapper] cleanup supervisor_pilot 3248742 1622313
[2025-04-18 02:23:39] 2025-04-18 06:23:38,366 [wrapper] Test setup, not cleaning
[2025-04-18 02:23:39] 2025-04-18 06:23:38,417 [wrapper] apfmon messages muted
[2025-04-18 02:23:39] 2025-04-18 06:23:38,438 [wrapper] ==== wrapper stdout END ====
[2025-04-18 02:23:39] 2025-04-18 06:23:38,457 [wrapper] ==== wrapper stderr END ====
[2025-04-18 02:23:39]  *** Error codes and diagnostics ***
[2025-04-18 02:23:39]     "exeErrorCode": 0,
[2025-04-18 02:23:39]     "exeErrorDiag": "",
[2025-04-18 02:23:39]     "pilotErrorCode": 0,
[2025-04-18 02:23:39]     "pilotErrorDiag": "",
[2025-04-18 02:23:39]  *** Listing of results directory ***
[2025-04-18 02:23:39] total 422640
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas      5111 Apr 16 22:36 queuedata.json
[2025-04-18 02:23:39] -rwx------. 1 boincer umatlas     37140 Apr 16 22:36 runpilot2-wrapper.sh
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas    495897 Apr 16 22:36 pilot3.tar.gz
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas       100 Apr 17 08:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 02:23:39] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 17 08:57 run_atlas
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas       105 Apr 17 08:57 job.xml
[2025-04-18 02:23:39] -rw-r--r--. 2 boincer umatlas 222875764 Apr 17 08:57 EVNT.44075481._001922.pool.root.1
[2025-04-18 02:23:39] -rw-r--r--. 2 boincer umatlas     17569 Apr 17 08:57 start_atlas.sh
[2025-04-18 02:23:39] drwxrwx--x. 2 boincer umatlas      4096 Apr 17 08:57 shared
[2025-04-18 02:23:39] -rw-r--r--. 2 boincer umatlas    508879 Apr 17 08:57 input.tar.gz
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas         0 Apr 17 08:57 boinc_lockfile
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas      2579 Apr 17 08:57 pandaJob.out
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas       467 Apr 17 08:57 setup.sh.local
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas    990266 Apr 17 08:58 agis_schedconf.cvmfs.json
[2025-04-18 02:23:39] drwx------. 4 boincer umatlas      4096 Apr 17 08:58 pilot3
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas 194783948 Apr 18 02:20 HITS.44075483._049182.pool.root.1
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas      6672 Apr 18 02:20 init_data.xml
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas       531 Apr 18 02:20 boinc_task_state.xml
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas      1054 Apr 18 02:22 memory_monitor_summary.json
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas   1618536 Apr 18 02:22 agis_ddmendpoints.agis.ALL.json
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas    822710 Apr 18 02:22 log.44075483._049182.job.log.tgz.1
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas        95 Apr 18 02:22 pilot_heartbeat.json
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas      7742 Apr 18 02:23 heartbeat.json
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas      8192 Apr 18 02:23 boinc_mmap_file
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas      4353 Apr 18 02:23 pilotlog.txt
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas        28 Apr 18 02:23 wrapper_checkpoint.txt
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas   4807797 Apr 18 02:23 log.44075483._049182.job.log.1
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas       357 Apr 18 02:23 output.list
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas       620 Apr 18 02:23 runtime_log
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas   5652480 Apr 18 02:23 result.tar.gz
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas     11406 Apr 18 02:23 runtime_log.err
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas       658 Apr 18 02:23 dSzKDmcIUP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmrO3KDmqhkKZn.diag
[2025-04-18 02:23:39] -rw-r--r--. 1 boincer umatlas     21581 Apr 18 02:23 stderr.txt
[2025-04-18 02:23:39] HITS file was successfully produced:
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas 194783948 Apr 18 02:20 shared/HITS.pool.root.1
[2025-04-18 02:23:39]  *** Contents of shared directory: ***
[2025-04-18 02:23:39] total 413920
[2025-04-18 02:23:39] -rw-r--r--. 2 boincer umatlas 222875764 Apr 17 08:57 ATLAS.root_0
[2025-04-18 02:23:39] -rw-r--r--. 2 boincer umatlas     17569 Apr 17 08:57 start_atlas.sh
[2025-04-18 02:23:39] -rw-r--r--. 2 boincer umatlas    508879 Apr 17 08:57 input.tar.gz
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas 194783948 Apr 18 02:20 HITS.pool.root.1
[2025-04-18 02:23:39] -rw-------. 1 boincer umatlas   5652480 Apr 18 02:23 result.tar.gz
02:23:41 (1612648): run_atlas exited; CPU time 55448.674910
02:23:41 (1612648): called boinc_finish(0)

</stderr_txt>
]]>

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