Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:27:52 (9532): wrapper (7.7.26015): starting
04:27:52 (9532): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 04:27:52] Arguments: --nthreads 12
[2025-04-17 04:27:52] Threads: 12
[2025-04-17 04:27:52] Checking for CVMFS
[2025-04-17 04:27:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 04:27:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 04:27:53] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 04:27:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 04:27:53] 2.11.2.0 6988 41679 113436 144954 1 295 16691552 18432000 10110 130560 0 63072795 98.533 207762361 32219 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 04:27:53] CVMFS is ok
[2025-04-17 04:27:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 04:27:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 04:27:53] Further information can be found at the LHC@home message board.
[2025-04-17 04:27:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 04:27:53] Checking for apptainer binary...
[2025-04-17 04:27:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 04:27:53] Running /usr/bin/apptainer --version
[2025-04-17 04:27:55] apptainer version 1.3.2-1.el7
[2025-04-17 04:27:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 04:28:07] c-206-17.aglt2.org
[2025-04-17 04:28:07] apptainer works
[2025-04-17 04:28:07] Set ATHENA_PROC_NUMBER=12
[2025-04-17 04:28:07] Set ATHENA_CORE_NUMBER=12
[2025-04-17 04:28:07] Starting ATLAS job with PandaID=6603823867
[2025-04-17 04:28:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
12:12:33 (30084): wrapper (7.7.26015): starting
12:12:33 (30084): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 12:12:33] Arguments: --nthreads 12
[2025-04-17 12:12:33] Threads: 12
[2025-04-17 12:12:33] This job has been restarted, cleaning up previous attempt
[2025-04-17 12:12:33] Checking for CVMFS
[2025-04-17 12:12:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 12:12:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 12:12:36] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 12:12:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 12:12:37] 2.11.2.0 6988 42143 114056 144971 1 18 17416356 18432000 10190 130560 0 63984295 98.532 210669128 32138 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 12:12:37] CVMFS is ok
[2025-04-17 12:12:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 12:12:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 12:12:37] Further information can be found at the LHC@home message board.
[2025-04-17 12:12:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 12:12:37] Checking for apptainer binary...
[2025-04-17 12:12:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 12:12:37] Running /usr/bin/apptainer --version
[2025-04-17 12:12:38] apptainer version 1.3.2-1.el7
[2025-04-17 12:12:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 12:12:55] c-206-17.aglt2.org
[2025-04-17 12:12:55] apptainer works
[2025-04-17 12:12:55] Set ATHENA_PROC_NUMBER=12
[2025-04-17 12:12:55] Set ATHENA_CORE_NUMBER=12
[2025-04-17 12:13:04] Starting ATLAS job with PandaID=6603823867
[2025-04-17 12:13:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:13:43 (27952): wrapper (7.7.26015): starting
00:13:43 (27952): wrapper: running run_atlas (--nthreads 12)
[2025-04-18 00:13:43] Arguments: --nthreads 12
[2025-04-18 00:13:43] Threads: 12
[2025-04-18 00:13:43] This job has been restarted, cleaning up previous attempt
[2025-04-18 00:13:43] Checking for CVMFS
[2025-04-18 00:13:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-18 00:13:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-18 00:13:45] Running cvmfs_config stat atlas.cern.ch
[2025-04-18 00:13:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-18 00:13:47] 2.11.2.0 6988 42864 141740 144989 0 21 13191208 18432000 8260 130560 0 64922781 98.545 212327976 32145 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-18 00:13:47] CVMFS is ok
[2025-04-18 00:13:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-18 00:13:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-18 00:13:47] Further information can be found at the LHC@home message board.
[2025-04-18 00:13:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-18 00:13:47] Checking for apptainer binary...
[2025-04-18 00:13:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-18 00:13:47] Running /usr/bin/apptainer --version
[2025-04-18 00:13:48] apptainer version 1.3.2-1.el7
[2025-04-18 00:13:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-18 00:14:46] c-206-17.aglt2.org
[2025-04-18 00:14:46] apptainer works
[2025-04-18 00:14:47] Set ATHENA_PROC_NUMBER=12
[2025-04-18 00:14:47] Set ATHENA_CORE_NUMBER=12
[2025-04-18 00:14:47] Starting ATLAS job with PandaID=6603823867
[2025-04-18 00:14:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 22:29:37]  *** The last 200 lines of the pilot log: ***
[2025-04-19 22:29:37] 2025-04-20 02:28:49,290 | INFO     | monitor loop #5813: job 0:6603823867 is in state 'finished'
[2025-04-19 22:29:37] 2025-04-20 02:28:49,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 22:29:37] 2025-04-20 02:28:51,921 | INFO     | monitor loop #5814: job 0:6603823867 is in state 'finished'
[2025-04-19 22:29:37] 2025-04-20 02:28:51,921 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 22:29:37] 2025-04-20 02:28:52,159 | INFO     | PID=8309 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-19 22:29:37] 2025-04-20 02:28:52,160 | INFO     | .. there are 25 such processes running
[2025-04-19 22:29:37] 2025-04-20 02:28:53,501 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-19 22:29:37] 2025-04-20 02:28:53,502 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603823867/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 22:29:37] 2025-04-20 02:28:53,516 | INFO     | extracted standard info from prmon json
[2025-04-19 22:29:37] 2025-04-20 02:28:53,516 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 22:29:37] 2025-04-20 02:28:53,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 22:29:37] 2025-04-20 02:28:53,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-19 22:29:37] 2025-04-20 02:28:53,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-19 22:29:37] 2025-04-20 02:28:53,597 | INFO     | fitting pss+swap vs Time
[2025-04-19 22:29:37] 2025-04-20 02:28:53,602 | INFO     | sum of square deviations: 6205672177106.997
[2025-04-19 22:29:37] 2025-04-20 02:28:54,463 | INFO     | monitor loop #5815: job 0:6603823867 is in state 'finished'
[2025-04-19 22:29:37] 2025-04-20 02:28:54,493 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 22:29:37] 2025-04-20 02:28:56,442 | INFO     | sum of deviations: 8443613925294.486
[2025-04-19 22:29:37] 2025-04-20 02:28:56,442 | INFO     | mean x: 1745033196.344383
[2025-04-19 22:29:37] 2025-04-20 02:28:56,443 | INFO     | mean y: 2621849.7278084713
[2025-04-19 22:29:37] 2025-04-20 02:28:56,443 | INFO     | -- intersect: -2371719909.914345
[2025-04-19 22:29:37] 2025-04-20 02:28:56,443 | INFO     | intersect: -2371719909.914345
[2025-04-19 22:29:37] 2025-04-20 02:28:56,448 | INFO     | chi2: 22.928004120856034
[2025-04-19 22:29:37] 2025-04-20 02:28:56,467 | INFO     | sum of square deviations: 6171451646020.659
[2025-04-19 22:29:37] 2025-04-20 02:28:57,077 | INFO     | monitor loop #5816: job 0:6603823867 is in state 'finished'
[2025-04-19 22:29:37] 2025-04-20 02:28:57,077 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 22:29:37] 2025-04-20 02:28:58,375 | INFO     | sum of deviations: 9420962189822.9
[2025-04-19 22:29:37] 2025-04-20 02:28:58,376 | INFO     | mean x: 1745033043.8483396
[2025-04-19 22:29:37] 2025-04-20 02:28:58,376 | INFO     | mean y: 2626205.1335793356
[2025-04-19 22:29:37] 2025-04-20 02:28:58,376 | INFO     | -- intersect: -2661234952.506242
[2025-04-19 22:29:37] 2025-04-20 02:28:58,377 | INFO     | intersect: -2661234952.506242
[2025-04-19 22:29:37] 2025-04-20 02:28:58,384 | INFO     | chi2: 18.911466727677762
[2025-04-19 22:29:37] 2025-04-20 02:28:58,384 | INFO     | current chi2=18.911466727677762 (change=17.51804200665117 %)
[2025-04-19 22:29:37] 2025-04-20 02:28:58,384 | INFO     | right removable region: 2709
[2025-04-19 22:29:37] 2025-04-20 02:28:58,488 | INFO     | sum of square deviations: 6171447928981.973
[2025-04-19 22:29:37] 2025-04-20 02:28:59,709 | INFO     | monitor loop #5817: job 0:6603823867 is in state 'finished'
[2025-04-19 22:29:37] 2025-04-20 02:28:59,709 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 22:29:37] 2025-04-20 02:29:01,598 | INFO     | sum of deviations: 7397224548798.856
[2025-04-19 22:29:37] 2025-04-20 02:29:01,599 | INFO     | mean x: 1745033348.8487084
[2025-04-19 22:29:37] 2025-04-20 02:29:01,599 | INFO     | mean y: 2626512.2874538745
[2025-04-19 22:29:37] 2025-04-20 02:29:01,599 | INFO     | -- intersect: -2089006387.336749
[2025-04-19 22:29:37] 2025-04-20 02:29:01,600 | INFO     | intersect: -2089006387.336749
[2025-04-19 22:29:37] 2025-04-20 02:29:01,604 | INFO     | chi2: 18.109795401415887
[2025-04-19 22:29:37] 2025-04-20 02:29:01,605 | INFO     | current chi2=18.109795401415887 (change=21.014514364367862 %)
[2025-04-19 22:29:37] 2025-04-20 02:29:01,605 | INFO     | left removable region: 10
[2025-04-19 22:29:37] 2025-04-20 02:29:01,609 | INFO     | sum of square deviations: 6096602441951.118
[2025-04-19 22:29:37] 2025-04-20 02:29:02,332 | INFO     | monitor loop #5818: job 0:6603823867 is in state 'finished'
[2025-04-19 22:29:37] 2025-04-20 02:29:02,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 22:29:37] 2025-04-20 02:29:02,879 | INFO     | sum of deviations: 7463652736764.467
[2025-04-19 22:29:37] 2025-04-20 02:29:02,880 | INFO     | mean x: 1745033318.3564284
[2025-04-19 22:29:37] 2025-04-20 02:29:02,880 | INFO     | mean y: 2634939.1741385697
[2025-04-19 22:29:37] 2025-04-20 02:29:02,880 | INFO     | -- intersect: -2133689813.228105
[2025-04-19 22:29:37] 2025-04-20 02:29:02,912 | INFO     | intersect: -2133689813.228105
[2025-04-19 22:29:37] 2025-04-20 02:29:02,926 | INFO     | chi2: 10.496524107631785
[2025-04-19 22:29:37] 2025-04-20 02:29:02,950 | INFO     | -- intersect: -2133689813.228105
[2025-04-19 22:29:37] 2025-04-20 02:29:02,950 | INFO     | current memory leak: 1.22 B/s (using 2699 data points, chi2=10.50)
[2025-04-19 22:29:37] 2025-04-20 02:29:02,992 | INFO     | ..............................
[2025-04-19 22:29:37] 2025-04-20 02:29:02,992 | INFO     | . Timing measurements:
[2025-04-19 22:29:37] 2025-04-20 02:29:03,001 | INFO     | . get job = 4 s
[2025-04-19 22:29:37] 2025-04-20 02:29:03,001 | INFO     | . initial setup = 18 s
[2025-04-19 22:29:37] 2025-04-20 02:29:03,001 | INFO     | . payload setup = 152 s
[2025-04-19 22:29:37] 2025-04-20 02:29:03,001 | INFO     | . stage-in = 1 s
[2025-04-19 22:29:37] 2025-04-20 02:29:03,001 | INFO     | . payload execution = 165756 s
[2025-04-19 22:29:37] 2025-04-20 02:29:03,001 | INFO     | . stage-out = 31 s
[2025-04-19 22:29:37] 2025-04-20 02:29:03,002 | INFO     | . log creation = 9 s
[2025-04-19 22:29:37] 2025-04-20 02:29:03,002 | INFO     | ..............................
[2025-04-19 22:29:37] 2025-04-20 02:29:04,443 | INFO     | 
[2025-04-19 22:29:37] 2025-04-20 02:29:04,443 | INFO     | job summary report
[2025-04-19 22:29:37] 2025-04-20 02:29:04,443 | INFO     | --------------------------------------------------
[2025-04-19 22:29:37] 2025-04-20 02:29:04,443 | INFO     | PanDA job id: 6603823867
[2025-04-19 22:29:37] 2025-04-20 02:29:04,444 | INFO     | task id: 44075483
[2025-04-19 22:29:37] 2025-04-20 02:29:04,444 | INFO     | errors: (none)
[2025-04-19 22:29:37] 2025-04-20 02:29:04,444 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 22:29:37] 2025-04-20 02:29:04,444 | INFO     | pilot state: finished 
[2025-04-19 22:29:37] 2025-04-20 02:29:04,444 | INFO     | transexitcode: 0
[2025-04-19 22:29:37] 2025-04-20 02:29:04,445 | INFO     | exeerrorcode: 0
[2025-04-19 22:29:37] 2025-04-20 02:29:04,445 | INFO     | exeerrordiag: 
[2025-04-19 22:29:37] 2025-04-20 02:29:04,445 | INFO     | exitcode: 0
[2025-04-19 22:29:37] 2025-04-20 02:29:04,445 | INFO     | exitmsg: OK
[2025-04-19 22:29:37] 2025-04-20 02:29:04,445 | INFO     | cpuconsumptiontime: 110734 s
[2025-04-19 22:29:37] 2025-04-20 02:29:04,467 | INFO     | nevents: 400
[2025-04-19 22:29:37] 2025-04-20 02:29:04,467 | INFO     | neventsw: 0
[2025-04-19 22:29:37] 2025-04-20 02:29:04,467 | INFO     | pid: 28251
[2025-04-19 22:29:37] 2025-04-20 02:29:04,467 | INFO     | pgrp: 28251
[2025-04-19 22:29:37] 2025-04-20 02:29:04,467 | INFO     | corecount: 12
[2025-04-19 22:29:37] 2025-04-20 02:29:04,468 | INFO     | event service: False
[2025-04-19 22:29:37] 2025-04-20 02:29:04,468 | INFO     | sizes: {0: 2425944, 3: 2426545, 4: 2426629, 6: 2426685, 7: 2426856, 8: 2426884, 22: 2427040, 35: 2427068, 48: 2427096, 60: 2427124, 72: 2427152, 86: 2427460, 97: 2
[2025-04-19 22:29:37] 2025-04-20 02:29:04,468 | INFO     | --------------------------------------------------
[2025-04-19 22:29:37] 2025-04-20 02:29:04,468 | INFO     | 
[2025-04-19 22:29:37] 2025-04-20 02:29:04,469 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-19 22:29:37] 2025-04-20 02:29:04,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,938 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,938 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,962 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,981 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,981 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,981 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,982 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,982 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,982 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:04,982 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:05,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:05,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:05,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:05,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:05,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 22:29:37] 2025-04-20 02:29:05,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:05,028 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 22:29:37] 2025-04-20 02:29:05,029 | INFO     | job 6603823867 has completed (purged errors)
[2025-04-19 22:29:37] 2025-04-20 02:29:05,029 | INFO     | overall cleanup function is called
[2025-04-19 22:29:37] 2025-04-20 02:29:06,143 | INFO     | --- collectZombieJob: --- 10, [28251]
[2025-04-19 22:29:37] 2025-04-20 02:29:06,143 | INFO     | zombie collector waiting for pid 28251
[2025-04-19 22:29:37] 2025-04-20 02:29:06,143 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 22:29:37] 2025-04-20 02:29:06,163 | INFO     | collected zombie processes
[2025-04-19 22:29:37] 2025-04-20 02:29:06,163 | INFO     | will attempt to kill all subprocesses of pid=28251
[2025-04-19 22:29:37] 2025-04-20 02:29:13,740 | INFO     | process IDs to be killed: [28251] (in reverse order)
[2025-04-19 22:29:37] 2025-04-20 02:29:14,435 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 22:29:37] 2025-04-20 02:29:14,435 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 22:29:37] 2025-04-20 02:29:14,449 | INFO     | did not find any defunct processes belonging to 28251
[2025-04-19 22:29:37] 2025-04-20 02:29:14,463 | INFO     | did not find any defunct processes belonging to 28251
[2025-04-19 22:29:37] 2025-04-20 02:29:14,463 | INFO     | ready for new job
[2025-04-19 22:29:37] 2025-04-20 02:29:14,464 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 22:29:37] 2025-04-20 02:29:14,481 | INFO     | **************************************
[2025-04-19 22:29:37] 2025-04-20 02:29:14,484 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 22:29:37] 2025-04-20 02:29:14,484 | INFO     | **************************************
[2025-04-19 22:29:37] 2025-04-20 02:29:14,485 | INFO     | 
[2025-04-19 22:29:37] 2025-04-20 02:29:14,486 | INFO     | architecture information:
[2025-04-19 22:29:37] 2025-04-20 02:29:14,488 | INFO     | executing command: cat /etc/os-release
[2025-04-19 22:29:37] 2025-04-20 02:29:14,523 | INFO     | cat /etc/os-release:
[2025-04-19 22:29:37] NAME="CentOS Linux"
[2025-04-19 22:29:37] VERSION="7 (Core)"
[2025-04-19 22:29:37] ID="centos"
[2025-04-19 22:29:37] ID_LIKE="rhel fedora"
[2025-04-19 22:29:37] VERSION_ID="7"
[2025-04-19 22:29:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 22:29:37] ANSI_COLOR="0;31"
[2025-04-19 22:29:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 22:29:37] HOME_URL="https://www.centos.org/"
[2025-04-19 22:29:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 22:29:37] 
[2025-04-19 22:29:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 22:29:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 22:29:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 22:29:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 22:29:37] 
[2025-04-19 22:29:37] 2025-04-20 02:29:14,524 | INFO     | **************************************
[2025-04-19 22:29:37] 2025-04-20 02:29:15,053 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-19 22:29:37] 2025-04-20 02:29:15,479 | INFO     | sufficient remaining disk space (29262610432 B)
[2025-04-19 22:29:37] 2025-04-20 02:29:15,480 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 22:29:37] 2025-04-20 02:29:15,480 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 22:29:37] 2025-04-20 02:29:15,480 | INFO     | update_server=False
[2025-04-19 22:29:37] 2025-04-20 02:29:15,587 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 22:29:37] 2025-04-20 02:29:15,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 22:29:37] 2025-04-20 02:29:15,771 | INFO     | all job control threads have been joined
[2025-04-19 22:29:37] 2025-04-20 02:29:16,201 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 22:29:37] 2025-04-20 02:29:16,201 | INFO     | aborting loop
[2025-04-19 22:29:37] 2025-04-20 02:29:16,330 | INFO     | all payload control threads have been joined
[2025-04-19 22:29:37] 2025-04-20 02:29:16,593 | INFO     | [job] retrieve thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:16,602 | INFO     | all data control threads have been joined
[2025-04-19 22:29:37] 2025-04-20 02:29:16,679 | INFO     | [job] validate thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:16,729 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:16,743 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:16,793 | INFO     | [job] control thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:17,213 | INFO     | [job] job monitor thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:17,222 | INFO     | [data] copytool_in thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:17,283 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:17,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:17,387 | INFO     | [payload] control thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:17,451 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 22:29:37] 2025-04-20 02:29:17,611 | INFO     | [data] control thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:17,623 | INFO     | [data] copytool_out thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:17,987 | INFO     | [payload] validate_post thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:18,233 | INFO     | [payload] failed_post thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:18,361 | INFO     | PID=8309 has CPU usage=12.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-19 22:29:37] 2025-04-20 02:29:18,364 | INFO     | .. there are 25 such processes running
[2025-04-19 22:29:37] 2025-04-20 02:29:18,365 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 22:29:37] 2025-04-20 02:29:18,365 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 22:29:37] 2025-04-20 02:29:18,365 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 22:29:37] 2025-04-20 02:29:18,458 | INFO     | [job] queue monitor thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:18,943 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 22:29:37] 2025-04-20 02:29:22,963 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 22:29:37] 2025-04-20 02:29:25,072 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140159988594496)>', '<ExcThread(monitor, started 140159236417280)>']
[2025-04-19 22:29:37] 2025-04-20 02:29:25,409 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 22:29:37] 2025-04-20 02:29:25,409 | INFO     | [monitor] control thread has ended
[2025-04-19 22:29:37] 2025-04-20 02:29:30,098 | INFO     | all workflow threads have been joined
[2025-04-19 22:29:37] 2025-04-20 02:29:30,112 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 22:29:37] 2025-04-20 02:29:30,112 | INFO     | traces error code: 0
[2025-04-19 22:29:37] 2025-04-20 02:29:30,132 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 22:29:37] 2025-04-20 02:29:33,317 [wrapper] ==== pilot stdout END ====
[2025-04-19 22:29:37] 2025-04-20 02:29:33,401 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 22:29:37] 2025-04-20 02:29:33,467 [wrapper] pilotpid: 8309
[2025-04-19 22:29:37] 2025-04-20 02:29:33,503 [wrapper] Pilot exit status: 0
[2025-04-19 22:29:37] 2025-04-20 02:29:33,813 [wrapper] pandaids: 6603823867 6603823867 6603823867
[2025-04-19 22:29:37] 2025-04-20 02:29:34,428 [wrapper] cleanup supervisor_pilot 23843 8310
[2025-04-19 22:29:37] 2025-04-20 02:29:34,517 [wrapper] Test setup, not cleaning
[2025-04-19 22:29:37] 2025-04-20 02:29:34,579 [wrapper] apfmon messages muted
[2025-04-19 22:29:37] 2025-04-20 02:29:34,657 [wrapper] ==== wrapper stdout END ====
[2025-04-19 22:29:37] 2025-04-20 02:29:34,711 [wrapper] ==== wrapper stderr END ====
[2025-04-19 22:29:37]  *** Error codes and diagnostics ***
[2025-04-19 22:29:37]     "exeErrorCode": 0,
[2025-04-19 22:29:37]     "exeErrorDiag": "",
[2025-04-19 22:29:37]     "pilotErrorCode": 0,
[2025-04-19 22:29:37]     "pilotErrorDiag": "",
[2025-04-19 22:29:37]  *** Listing of results directory ***
[2025-04-19 22:29:37] total 646596
[2025-04-19 22:29:37] drwx------ 4 boincer umatlas      4096 Apr  3 03:09 pilot3
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas    503527 Apr  3 03:42 pilot3.tar.gz
[2025-04-19 22:29:37] -rwx------ 1 boincer umatlas     37140 Apr 16 04:14 runpilot2-wrapper.sh
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 04:14 queuedata.json
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas       100 Apr 17 04:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 22:29:37] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 04:27 run_atlas
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas       105 Apr 17 04:27 job.xml
[2025-04-19 22:29:37] -rw-r--r-- 3 boincer umatlas 223447430 Apr 17 04:27 EVNT.44075481._000629.pool.root.1
[2025-04-19 22:29:37] -rw-r--r-- 3 boincer umatlas 223447430 Apr 17 04:27 ATLAS.root_0
[2025-04-19 22:29:37] drwxrwx--x 2 boincer umatlas      4096 Apr 17 04:27 shared
[2025-04-19 22:29:37] -rw-r--r-- 2 boincer umatlas    517104 Apr 17 04:27 input.tar.gz
[2025-04-19 22:29:37] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 04:27 start_atlas.sh
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas         0 Apr 17 04:27 boinc_lockfile
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas      2578 Apr 18 00:14 pandaJob.out
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas       467 Apr 18 00:15 setup.sh.local
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas    990250 Apr 18 00:17 agis_schedconf.cvmfs.json
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas      5954 Apr 19 22:19 init_data.xml
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas 189756550 Apr 19 22:21 HITS.44075483._037924.pool.root.1
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas       533 Apr 19 22:22 boinc_task_state.xml
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas      1079 Apr 19 22:26 memory_monitor_summary.json
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas   1618536 Apr 19 22:26 agis_ddmendpoints.agis.ALL.json
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas   1507072 Apr 19 22:27 log.44075483._037924.job.log.tgz.1
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas        97 Apr 19 22:29 pilot_heartbeat.json
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas      7791 Apr 19 22:29 heartbeat.json
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas      8192 Apr 19 22:29 boinc_mmap_file
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas        30 Apr 19 22:29 wrapper_checkpoint.txt
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas      4746 Apr 19 22:29 pilotlog.txt
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas   9284745 Apr 19 22:29 log.44075483._037924.job.log.1
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas       357 Apr 19 22:29 output.list
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas       620 Apr 19 22:29 runtime_log
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas  10813440 Apr 19 22:29 result.tar.gz
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas     11507 Apr 19 22:29 runtime_log.err
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas       919 Apr 19 22:29 GfMMDm75CP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmFvZLDmgJYeNo.diag
[2025-04-19 22:29:37] -rw-r--r-- 1 boincer umatlas     25923 Apr 19 22:29 stderr.txt
[2025-04-19 22:29:37] HITS file was successfully produced:
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas 189756550 Apr 19 22:21 shared/HITS.pool.root.1
[2025-04-19 22:29:37]  *** Contents of shared directory: ***
[2025-04-19 22:29:37] total 414616
[2025-04-19 22:29:37] -rw-r--r-- 3 boincer umatlas 223447430 Apr 17 04:27 ATLAS.root_0
[2025-04-19 22:29:37] -rw-r--r-- 2 boincer umatlas    517104 Apr 17 04:27 input.tar.gz
[2025-04-19 22:29:37] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 04:27 start_atlas.sh
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas 189756550 Apr 19 22:21 HITS.pool.root.1
[2025-04-19 22:29:37] -rw------- 1 boincer umatlas  10813440 Apr 19 22:29 result.tar.gz
22:29:39 (27952): run_atlas exited; CPU time 116344.251970
22:29:39 (27952): called boinc_finish(0)

</stderr_txt>
]]>

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