Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:28:20 (1771): wrapper (7.7.26015): starting
04:28:20 (1771): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 04:28:20] Arguments: --nthreads 12
[2025-04-17 04:28:20] Threads: 12
[2025-04-17 04:28:20] Checking for CVMFS
[2025-04-17 04:28:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 04:28:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 04:28:20] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 04:28:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 04:28:20] 2.11.2.0 10995 191183 158948 144954 3 58 17842346 20275200 1 130560 0 21358276 99.989 6534320 48087 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 04:28:20] CVMFS is ok
[2025-04-17 04:28:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 04:28:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 04:28:20] Further information can be found at the LHC@home message board.
[2025-04-17 04:28:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 04:28:20] Checking for apptainer binary...
[2025-04-17 04:28:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 04:28:20] Running /usr/bin/apptainer --version
[2025-04-17 04:28:20] apptainer version 1.3.2-1.el7
[2025-04-17 04:28:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 04:28:21] c-205-22.aglt2.org
[2025-04-17 04:28:21] apptainer works
[2025-04-17 04:28:21] Set ATHENA_PROC_NUMBER=12
[2025-04-17 04:28:21] Set ATHENA_CORE_NUMBER=12
[2025-04-17 04:28:21] Starting ATLAS job with PandaID=6604882339
[2025-04-17 04:28:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 05:49:23]  *** The last 200 lines of the pilot log: ***
[2025-04-17 05:49:23]  is_altstaged=None
[2025-04-17 05:49:23]  is_tar=False
[2025-04-17 05:49:23]  lfn=log.44075164._057422.job.log.tgz.1
[2025-04-17 05:49:23]  mtime=0
[2025-04-17 05:49:23]  protocol_id=None
[2025-04-17 05:49:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-17 05:49:23]  replicas=None
[2025-04-17 05:49:23]  scope=mc23_13p6TeV
[2025-04-17 05:49:23]  status=None
[2025-04-17 05:49:23]  status_code=0
[2025-04-17 05:49:23]  storage_token=
[2025-04-17 05:49:23]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6604882339/log.44075164._057422.job.log.tgz.1
[2025-04-17 05:49:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/0c/log.44075164._057422.job.log.tgz.1
[2025-04-17 05:49:23]  workdir=None
[2025-04-17 05:49:23] ]
[2025-04-17 05:49:23] 2025-04-17 09:49:01,316 | INFO     | transferring file log.44075164._057422.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6604882339/log.44075164._057422.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-17 05:49:23] 2025-04-17 09:49:01,316 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6604882339/log.44075164._057422.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075164._057422.job
[2025-04-17 05:49:23] 2025-04-17 09:49:01,337 | INFO     | adding to output.list: log.44075164._057422.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ca/0c/log.44075164._057422.job.log.tg
[2025-04-17 05:49:23] 2025-04-17 09:49:01,338 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-17 05:49:23] 2025-04-17 09:49:01,338 | INFO     | summary of transferred files:
[2025-04-17 05:49:23] 2025-04-17 09:49:01,338 | INFO     |  -- lfn=log.44075164._057422.job.log.tgz.1, status_code=0, status=transferred
[2025-04-17 05:49:23] 2025-04-17 09:49:01,339 | INFO     | stage-out finished correctly
[2025-04-17 05:49:23] 2025-04-17 09:49:01,762 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-17 05:49:23] 2025-04-17 09:49:01,846 | INFO     | job 6604882339 has state=finished
[2025-04-17 05:49:23] 2025-04-17 09:49:01,846 | INFO     | preparing for final server update for job 6604882339 in state='finished'
[2025-04-17 05:49:23] 2025-04-17 09:49:01,847 | INFO     | this job has now completed (state=finished)
[2025-04-17 05:49:23] 2025-04-17 09:49:01,847 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-17 05:49:23] 2025-04-17 09:49:01,847 | INFO     | log transfer has been attempted: DONE
[2025-04-17 05:49:23] 2025-04-17 09:49:01,847 | INFO     | job 6604882339 has finished - writing final server update
[2025-04-17 05:49:23] 2025-04-17 09:49:01,848 | INFO     | total number of processed events: 400 (read)
[2025-04-17 05:49:23] 2025-04-17 09:49:01,849 | INFO     | executing command: lscpu
[2025-04-17 05:49:23] 2025-04-17 09:49:01,877 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-17 05:49:23] 2025-04-17 09:49:02,195 | INFO     | monitor loop #360: job 0:6604882339 is in state 'finished'
[2025-04-17 05:49:23] 2025-04-17 09:49:02,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 05:49:23] 2025-04-17 09:49:04,698 | INFO     | monitor loop #361: job 0:6604882339 is in state 'finished'
[2025-04-17 05:49:23] 2025-04-17 09:49:04,698 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 05:49:23] 2025-04-17 09:49:07,204 | INFO     | monitor loop #362: job 0:6604882339 is in state 'finished'
[2025-04-17 05:49:23] 2025-04-17 09:49:07,204 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 05:49:23] 2025-04-17 09:49:07,591 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-17 05:49:23] 2025-04-17 09:49:07,592 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6604882339/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 05:49:23] 2025-04-17 09:49:07,593 | INFO     | extracted standard info from prmon json
[2025-04-17 05:49:23] 2025-04-17 09:49:07,593 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 05:49:23] 2025-04-17 09:49:07,593 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 05:49:23] 2025-04-17 09:49:07,593 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 05:49:23] 2025-04-17 09:49:07,593 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 05:49:23] 2025-04-17 09:49:07,596 | INFO     | fitting pss+swap vs Time
[2025-04-17 05:49:23] 2025-04-17 09:49:07,596 | INFO     | sum of square deviations: 115715658.0
[2025-04-17 05:49:23] 2025-04-17 09:49:07,597 | INFO     | sum of deviations: 16641652719.000004
[2025-04-17 05:49:23] 2025-04-17 09:49:07,597 | INFO     | mean x: 1744881014.5
[2025-04-17 05:49:23] 2025-04-17 09:49:07,597 | INFO     | mean y: 2618564.361111111
[2025-04-17 05:49:23] 2025-04-17 09:49:07,597 | INFO     | -- intersect: -250937525415.85468
[2025-04-17 05:49:23] 2025-04-17 09:49:07,597 | INFO     | intersect: -250937525415.85468
[2025-04-17 05:49:23] 2025-04-17 09:49:07,597 | INFO     | chi2: 2.3799516249478487
[2025-04-17 05:49:23] 2025-04-17 09:49:07,597 | INFO     | -- intersect: -250937525415.85468
[2025-04-17 05:49:23] 2025-04-17 09:49:07,598 | INFO     | current memory leak: 143.82 B/s (using 72 data points, chi2=2.38)
[2025-04-17 05:49:23] 2025-04-17 09:49:07,598 | INFO     | ..............................
[2025-04-17 05:49:23] 2025-04-17 09:49:07,598 | INFO     | . Timing measurements:
[2025-04-17 05:49:23] 2025-04-17 09:49:07,598 | INFO     | . get job = 0 s
[2025-04-17 05:49:23] 2025-04-17 09:49:07,598 | INFO     | . initial setup = 2 s
[2025-04-17 05:49:23] 2025-04-17 09:49:07,598 | INFO     | . payload setup = 7 s
[2025-04-17 05:49:23] 2025-04-17 09:49:07,598 | INFO     | . stage-in = 0 s
[2025-04-17 05:49:23] 2025-04-17 09:49:07,598 | INFO     | . payload execution = 4798 s
[2025-04-17 05:49:23] 2025-04-17 09:49:07,599 | INFO     | . stage-out = 0 s
[2025-04-17 05:49:23] 2025-04-17 09:49:07,599 | INFO     | . log creation = 0 s
[2025-04-17 05:49:23] 2025-04-17 09:49:07,599 | INFO     | ..............................
[2025-04-17 05:49:23] 2025-04-17 09:49:07,683 | INFO     | 
[2025-04-17 05:49:23] 2025-04-17 09:49:07,683 | INFO     | job summary report
[2025-04-17 05:49:23] 2025-04-17 09:49:07,684 | INFO     | --------------------------------------------------
[2025-04-17 05:49:23] 2025-04-17 09:49:07,684 | INFO     | PanDA job id: 6604882339
[2025-04-17 05:49:23] 2025-04-17 09:49:07,684 | INFO     | task id: 44075164
[2025-04-17 05:49:23] 2025-04-17 09:49:07,684 | INFO     | errors: (none)
[2025-04-17 05:49:23] 2025-04-17 09:49:07,684 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 05:49:23] 2025-04-17 09:49:07,684 | INFO     | pilot state: finished 
[2025-04-17 05:49:23] 2025-04-17 09:49:07,685 | INFO     | transexitcode: 0
[2025-04-17 05:49:23] 2025-04-17 09:49:07,685 | INFO     | exeerrorcode: 0
[2025-04-17 05:49:23] 2025-04-17 09:49:07,685 | INFO     | exeerrordiag: 
[2025-04-17 05:49:23] 2025-04-17 09:49:07,685 | INFO     | exitcode: 0
[2025-04-17 05:49:23] 2025-04-17 09:49:07,685 | INFO     | exitmsg: OK
[2025-04-17 05:49:23] 2025-04-17 09:49:07,685 | INFO     | cpuconsumptiontime: 45556 s
[2025-04-17 05:49:23] 2025-04-17 09:49:07,685 | INFO     | nevents: 400
[2025-04-17 05:49:23] 2025-04-17 09:49:07,685 | INFO     | neventsw: 0
[2025-04-17 05:49:23] 2025-04-17 09:49:07,685 | INFO     | pid: 11836
[2025-04-17 05:49:23] 2025-04-17 09:49:07,686 | INFO     | pgrp: 11836
[2025-04-17 05:49:23] 2025-04-17 09:49:07,686 | INFO     | corecount: 12
[2025-04-17 05:49:23] 2025-04-17 09:49:07,686 | INFO     | event service: False
[2025-04-17 05:49:23] 2025-04-17 09:49:07,686 | INFO     | sizes: {0: 2426562, 1: 2426761, 6: 2426967, 11: 2426995, 4810: 2453082, 4811: 2462207, 4817: 2462321}
[2025-04-17 05:49:23] 2025-04-17 09:49:07,686 | INFO     | --------------------------------------------------
[2025-04-17 05:49:23] 2025-04-17 09:49:07,686 | INFO     | 
[2025-04-17 05:49:23] 2025-04-17 09:49:07,686 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 05:49:23] 2025-04-17 09:49:07,708 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,708 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,708 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,709 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,709 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,709 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,709 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,709 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,709 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,710 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,710 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,710 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,710 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,710 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,710 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 05:49:23] 2025-04-17 09:49:07,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 05:49:23] 2025-04-17 09:49:07,711 | INFO     | job 6604882339 has completed (purged errors)
[2025-04-17 05:49:23] 2025-04-17 09:49:07,712 | INFO     | overall cleanup function is called
[2025-04-17 05:49:23] 2025-04-17 09:49:08,720 | INFO     | --- collectZombieJob: --- 10, [11836]
[2025-04-17 05:49:23] 2025-04-17 09:49:08,720 | INFO     | zombie collector waiting for pid 11836
[2025-04-17 05:49:23] 2025-04-17 09:49:08,720 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 05:49:23] 2025-04-17 09:49:08,720 | INFO     | collected zombie processes
[2025-04-17 05:49:23] 2025-04-17 09:49:08,720 | INFO     | will attempt to kill all subprocesses of pid=11836
[2025-04-17 05:49:23] 2025-04-17 09:49:08,814 | INFO     | process IDs to be killed: [11836] (in reverse order)
[2025-04-17 05:49:23] 2025-04-17 09:49:08,864 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 05:49:23] 2025-04-17 09:49:08,864 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 05:49:23] 2025-04-17 09:49:08,867 | INFO     | did not find any defunct processes belonging to 11836
[2025-04-17 05:49:23] 2025-04-17 09:49:08,869 | INFO     | did not find any defunct processes belonging to 11836
[2025-04-17 05:49:23] 2025-04-17 09:49:08,869 | INFO     | ready for new job
[2025-04-17 05:49:23] 2025-04-17 09:49:08,870 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 05:49:23] 2025-04-17 09:49:08,871 | INFO     | **************************************
[2025-04-17 05:49:23] 2025-04-17 09:49:08,871 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 05:49:23] 2025-04-17 09:49:08,871 | INFO     | **************************************
[2025-04-17 05:49:23] 2025-04-17 09:49:08,871 | INFO     | 
[2025-04-17 05:49:23] 2025-04-17 09:49:08,871 | INFO     | architecture information:
[2025-04-17 05:49:23] 2025-04-17 09:49:08,872 | INFO     | executing command: cat /etc/os-release
[2025-04-17 05:49:23] 2025-04-17 09:49:08,884 | INFO     | cat /etc/os-release:
[2025-04-17 05:49:23] NAME="CentOS Linux"
[2025-04-17 05:49:23] VERSION="7 (Core)"
[2025-04-17 05:49:23] ID="centos"
[2025-04-17 05:49:23] ID_LIKE="rhel fedora"
[2025-04-17 05:49:23] VERSION_ID="7"
[2025-04-17 05:49:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 05:49:23] ANSI_COLOR="0;31"
[2025-04-17 05:49:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 05:49:23] HOME_URL="https://www.centos.org/"
[2025-04-17 05:49:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 05:49:23] 
[2025-04-17 05:49:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 05:49:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 05:49:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 05:49:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 05:49:23] 
[2025-04-17 05:49:23] 2025-04-17 09:49:08,884 | INFO     | **************************************
[2025-04-17 05:49:23] 2025-04-17 09:49:09,387 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 05:49:23] 2025-04-17 09:49:09,403 | INFO     | sufficient remaining disk space (29410459648 B)
[2025-04-17 05:49:23] 2025-04-17 09:49:09,403 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 05:49:23] 2025-04-17 09:49:09,403 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 05:49:23] 2025-04-17 09:49:09,403 | INFO     | update_server=False
[2025-04-17 05:49:23] 2025-04-17 09:49:09,404 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 05:49:23] 2025-04-17 09:49:09,404 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 05:49:23] 2025-04-17 09:49:09,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 05:49:23] 2025-04-17 09:49:09,693 | INFO     | all data control threads have been joined
[2025-04-17 05:49:23] 2025-04-17 09:49:09,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-17 05:49:23] 2025-04-17 09:49:09,708 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-17 05:49:23] 2025-04-17 09:49:09,718 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 05:49:23] 2025-04-17 09:49:09,718 | INFO     | will abort loop
[2025-04-17 05:49:23] 2025-04-17 09:49:09,759 | INFO     | all job control threads have been joined
[2025-04-17 05:49:23] 2025-04-17 09:49:09,849 | INFO     | PID=5477 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-17 05:49:23] 2025-04-17 09:49:09,849 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 05:49:23] 2025-04-17 09:49:09,849 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 05:49:23] 2025-04-17 09:49:09,849 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 05:49:23] 2025-04-17 09:49:09,943 | INFO     | all payload control threads have been joined
[2025-04-17 05:49:23] 2025-04-17 09:49:10,405 | INFO     | [job] retrieve thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:10,410 | INFO     | [job] queue monitor thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:10,500 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:10,543 | INFO     | [payload] failed_post thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:10,698 | INFO     | [data] control thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:10,723 | INFO     | [job] job monitor thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:10,764 | INFO     | [job] control thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:10,770 | INFO     | [data] copytool_in thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:10,949 | INFO     | [payload] control thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:11,184 | INFO     | [payload] validate_post thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:11,317 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:11,334 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:11,341 | INFO     | [job] validate thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:11,439 | INFO     | [data] copytool_out thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:11,633 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:12,354 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 05:49:23] 2025-04-17 09:49:16,356 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 05:49:23] 2025-04-17 09:49:18,125 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140549946607424)>', '<ExcThread(monitor, started 140549239596800)>']
[2025-04-17 05:49:23] 2025-04-17 09:49:18,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 05:49:23] 2025-04-17 09:49:18,896 | INFO     | [monitor] control thread has ended
[2025-04-17 05:49:23] 2025-04-17 09:49:23,152 | INFO     | all workflow threads have been joined
[2025-04-17 05:49:23] 2025-04-17 09:49:23,153 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 05:49:23] 2025-04-17 09:49:23,153 | INFO     | traces error code: 0
[2025-04-17 05:49:23] 2025-04-17 09:49:23,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 05:49:23] 2025-04-17 09:49:23,240 [wrapper] ==== pilot stdout END ====
[2025-04-17 05:49:23] 2025-04-17 09:49:23,244 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 05:49:23] 2025-04-17 09:49:23,247 [wrapper] pilotpid: 5477
[2025-04-17 05:49:23] 2025-04-17 09:49:23,251 [wrapper] Pilot exit status: 0
[2025-04-17 05:49:23] 2025-04-17 09:49:23,266 [wrapper] pandaids: 6604882339
[2025-04-17 05:49:23] 2025-04-17 09:49:23,304 [wrapper] cleanup supervisor_pilot  2535 5478
[2025-04-17 05:49:23] 2025-04-17 09:49:23,308 [wrapper] Test setup, not cleaning
[2025-04-17 05:49:23] 2025-04-17 09:49:23,312 [wrapper] apfmon messages muted
[2025-04-17 05:49:23] 2025-04-17 09:49:23,316 [wrapper] ==== wrapper stdout END ====
[2025-04-17 05:49:23] 2025-04-17 09:49:23,319 [wrapper] ==== wrapper stderr END ====
[2025-04-17 05:49:23]  *** Error codes and diagnostics ***
[2025-04-17 05:49:23]     "exeErrorCode": 0,
[2025-04-17 05:49:23]     "exeErrorDiag": "",
[2025-04-17 05:49:23]     "pilotErrorCode": 0,
[2025-04-17 05:49:23]     "pilotErrorDiag": "",
[2025-04-17 05:49:23]  *** Listing of results directory ***
[2025-04-17 05:49:23] total 406844
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 22:36 pilot3.tar.gz
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 22:42 queuedata.json
[2025-04-17 05:49:23] -rwx------ 1 boincer umatlas     37140 Apr 16 22:42 runpilot2-wrapper.sh
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas       100 Apr 17 04:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 05:49:23] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 04:28 run_atlas
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas       105 Apr 17 04:28 job.xml
[2025-04-17 05:49:23] -rw-r--r-- 2 boincer umatlas 219228874 Apr 17 04:28 EVNT.44075162._000416.pool.root.1
[2025-04-17 05:49:23] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 04:28 start_atlas.sh
[2025-04-17 05:49:23] drwxrwx--x 2 boincer umatlas      4096 Apr 17 04:28 shared
[2025-04-17 05:49:23] -rw-r--r-- 2 boincer umatlas    508885 Apr 17 04:28 input.tar.gz
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas         0 Apr 17 04:28 boinc_lockfile
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas      2549 Apr 17 04:28 pandaJob.out
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas       424 Apr 17 04:28 setup.sh.local
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas    990239 Apr 17 04:28 agis_schedconf.cvmfs.json
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas   1618536 Apr 17 04:28 agis_ddmendpoints.agis.ALL.json
[2025-04-17 05:49:23] drwx------ 4 boincer umatlas      4096 Apr 17 04:28 pilot3
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas      5868 Apr 17 05:37 init_data.xml
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas 191866445 Apr 17 05:48 HITS.44075164._057422.pool.root.1
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas        95 Apr 17 05:48 pilot_heartbeat.json
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas       529 Apr 17 05:48 boinc_task_state.xml
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas      1049 Apr 17 05:48 memory_monitor_summary.json
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas    366075 Apr 17 05:49 log.44075164._057422.job.log.tgz.1
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas      7747 Apr 17 05:49 heartbeat.json
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas        27 Apr 17 05:49 wrapper_checkpoint.txt
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 05:49 boinc_mmap_file
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas      4855 Apr 17 05:49 pilotlog.txt
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas    459681 Apr 17 05:49 log.44075164._057422.job.log.1
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas       357 Apr 17 05:49 output.list
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas       620 Apr 17 05:49 runtime_log
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas    839680 Apr 17 05:49 result.tar.gz
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas     11015 Apr 17 05:49 runtime_log.err
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas       658 Apr 17 05:49 3VvLDmHOUP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm6O3KDmjORLUm.diag
[2025-04-17 05:49:23] -rw-r--r-- 1 boincer umatlas     21472 Apr 17 05:49 stderr.txt
[2025-04-17 05:49:23] HITS file was successfully produced:
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas 191866445 Apr 17 05:48 shared/HITS.pool.root.1
[2025-04-17 05:49:23]  *** Contents of shared directory: ***
[2025-04-17 05:49:23] total 402812
[2025-04-17 05:49:23] -rw-r--r-- 2 boincer umatlas 219228874 Apr 17 04:28 ATLAS.root_0
[2025-04-17 05:49:23] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 04:28 start_atlas.sh
[2025-04-17 05:49:23] -rw-r--r-- 2 boincer umatlas    508885 Apr 17 04:28 input.tar.gz
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas 191866445 Apr 17 05:48 HITS.pool.root.1
[2025-04-17 05:49:23] -rw------- 1 boincer umatlas    839680 Apr 17 05:49 result.tar.gz
05:49:25 (1771): run_atlas exited; CPU time 45539.330030
05:49:25 (1771): called boinc_finish(0)

</stderr_txt>
]]>

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