Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:00:30 (2714209): wrapper (7.7.26015): starting
05:00:30 (2714209): wrapper: running run_atlas (--nthreads 4)
[2025-04-19 05:00:30] Arguments: --nthreads 4
[2025-04-19 05:00:30] Threads: 4
[2025-04-19 05:00:30] Checking for CVMFS
[2025-04-19 05:00:30] No cvmfs_config command found, will try listing directly
[2025-04-19 05:00:30] CVMFS is ok
[2025-04-19 05:00:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-19 05:00:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-19 05:00:30] Further information can be found at the LHC@home message board.
[2025-04-19 05:00:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-19 05:00:30] Checking for apptainer binary...
[2025-04-19 05:00:30] which: no apptainer in ((null))
[2025-04-19 05:00:30] apptainer is not installed, using version from CVMFS
[2025-04-19 05:00:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-19 05:00:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot28/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2025-04-19 05:00:30] apptainer works
[2025-04-19 05:00:30] Set ATHENA_PROC_NUMBER=4
[2025-04-19 05:00:30] Set ATHENA_CORE_NUMBER=4
[2025-04-19 05:00:30] Starting ATLAS job with PandaID=6604952682
[2025-04-19 05:00:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot28/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 08:54:07]  *** The last 200 lines of the pilot log: ***
[2025-04-19 08:54:07] 2025-04-19 06:53:47,691 | INFO     | -- intersect: -21284119770.9741
[2025-04-19 08:54:07] 2025-04-19 06:53:47,691 | INFO     | intersect: -21284119770.9741
[2025-04-19 08:54:07] 2025-04-19 06:53:47,691 | INFO     | chi2: 0.970891431732333
[2025-04-19 08:54:07] 2025-04-19 06:53:47,691 | INFO     | current chi2=0.970891431732333 (change=67.10214194656857 %)
[2025-04-19 08:54:07] 2025-04-19 06:53:47,692 | INFO     | sum of square deviations: 3256879670.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,693 | INFO     | sum of deviations: 9123963248.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,694 | INFO     | mean x: 1745038925.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,694 | INFO     | mean y: 2335530.4429223742
[2025-04-19 08:54:07] 2025-04-19 06:53:47,694 | INFO     | -- intersect: -4886291815.752348
[2025-04-19 08:54:07] 2025-04-19 06:53:47,694 | INFO     | intersect: -4886291815.752348
[2025-04-19 08:54:07] 2025-04-19 06:53:47,695 | INFO     | chi2: 0.07897580775735927
[2025-04-19 08:54:07] 2025-04-19 06:53:47,695 | INFO     | current chi2=0.07897580775735927 (change=91.86563964042354 %)
[2025-04-19 08:54:07] 2025-04-19 06:53:47,695 | INFO     | sum of square deviations: 3038856977.5
[2025-04-19 08:54:07] 2025-04-19 06:53:47,697 | INFO     | sum of deviations: 3612032070.5000005
[2025-04-19 08:54:07] 2025-04-19 06:53:47,697 | INFO     | mean x: 1745039077.5
[2025-04-19 08:54:07] 2025-04-19 06:53:47,697 | INFO     | mean y: 2339328.8738317755
[2025-04-19 08:54:07] 2025-04-19 06:53:47,697 | INFO     | -- intersect: -2071840916.8155148
[2025-04-19 08:54:07] 2025-04-19 06:53:47,697 | INFO     | intersect: -2071840916.8155148
[2025-04-19 08:54:07] 2025-04-19 06:53:47,698 | INFO     | chi2: 0.020540414202559854
[2025-04-19 08:54:07] 2025-04-19 06:53:47,698 | INFO     | current chi2=0.020540414202559854 (change=73.99151108948827 %)
[2025-04-19 08:54:07] 2025-04-19 06:53:47,698 | INFO     | sum of square deviations: 2830787960.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,700 | INFO     | sum of deviations: 6763251108.999999
[2025-04-19 08:54:07] 2025-04-19 06:53:47,700 | INFO     | mean x: 1745039230.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,700 | INFO     | mean y: 2337015.846889952
[2025-04-19 08:54:07] 2025-04-19 06:53:47,700 | INFO     | -- intersect: -4166869111.321322
[2025-04-19 08:54:07] 2025-04-19 06:53:47,700 | INFO     | intersect: -4166869111.321322
[2025-04-19 08:54:07] 2025-04-19 06:53:47,701 | INFO     | chi2: 0.009545333142016981
[2025-04-19 08:54:07] 2025-04-19 06:53:47,701 | INFO     | current chi2=0.009545333142016981 (change=53.5290133495585 %)
[2025-04-19 08:54:07] 2025-04-19 06:53:47,701 | INFO     | sum of square deviations: 2632440055.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,703 | INFO     | sum of deviations: 8463881607.5
[2025-04-19 08:54:07] 2025-04-19 06:53:47,703 | INFO     | mean x: 1745039382.5
[2025-04-19 08:54:07] 2025-04-19 06:53:47,703 | INFO     | mean y: 2335726.75
[2025-04-19 08:54:07] 2025-04-19 06:53:47,703 | INFO     | -- intersect: -5608354896.898373
[2025-04-19 08:54:07] 2025-04-19 06:53:47,704 | INFO     | intersect: -5608354896.898373
[2025-04-19 08:54:07] 2025-04-19 06:53:47,704 | INFO     | chi2: 0.0009116624398490266
[2025-04-19 08:54:07] 2025-04-19 06:53:47,704 | INFO     | current chi2=0.0009116624398490266 (change=90.44912915782857 %)
[2025-04-19 08:54:07] 2025-04-19 06:53:47,705 | INFO     | sum of square deviations: 2443580700.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,706 | INFO     | sum of deviations: 7659012746.000001
[2025-04-19 08:54:07] 2025-04-19 06:53:47,706 | INFO     | mean x: 1745039535.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,706 | INFO     | mean y: 2336376.7336683418
[2025-04-19 08:54:07] 2025-04-19 06:53:47,706 | INFO     | -- intersect: -5467210849.940251
[2025-04-19 08:54:07] 2025-04-19 06:53:47,706 | INFO     | intersect: -5467210849.940251
[2025-04-19 08:54:07] 2025-04-19 06:53:47,707 | INFO     | chi2: 0.0008706957312477285
[2025-04-19 08:54:07] 2025-04-19 06:53:47,707 | INFO     | current chi2=0.0008706957312477285 (change=4.493626896385277 %)
[2025-04-19 08:54:07] 2025-04-19 06:53:47,707 | INFO     | left removable region: 60
[2025-04-19 08:54:07] 2025-04-19 06:53:47,708 | INFO     | sum of square deviations: 1342841922.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,709 | INFO     | sum of deviations: 3551538279.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,709 | INFO     | mean x: 1745040267.0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,709 | INFO     | mean y: 2339802.1042944784
[2025-04-19 08:54:07] 2025-04-19 06:53:47,709 | INFO     | -- intersect: -4612929653.749705
[2025-04-19 08:54:07] 2025-04-19 06:53:47,709 | INFO     | intersect: -4612929653.749705
[2025-04-19 08:54:07] 2025-04-19 06:53:47,710 | INFO     | chi2: 0.0005338570940364269
[2025-04-19 08:54:07] 2025-04-19 06:53:47,710 | INFO     | -- intersect: -4612929653.749705
[2025-04-19 08:54:07] 2025-04-19 06:53:47,710 | INFO     | current memory leak: 2.64 B/s (using 163 data points, chi2=0.00)
[2025-04-19 08:54:07] 2025-04-19 06:53:47,711 | INFO     | ..............................
[2025-04-19 08:54:07] 2025-04-19 06:53:47,711 | INFO     | . Timing measurements:
[2025-04-19 08:54:07] 2025-04-19 06:53:47,711 | INFO     | . get job = 0 s
[2025-04-19 08:54:07] 2025-04-19 06:53:47,711 | INFO     | . initial setup = 1 s
[2025-04-19 08:54:07] 2025-04-19 06:53:47,711 | INFO     | . payload setup = 5 s
[2025-04-19 08:54:07] 2025-04-19 06:53:47,711 | INFO     | . stage-in = 0 s
[2025-04-19 08:54:07] 2025-04-19 06:53:47,711 | INFO     | . payload execution = 13952 s
[2025-04-19 08:54:07] 2025-04-19 06:53:47,711 | INFO     | . stage-out = 1 s
[2025-04-19 08:54:07] 2025-04-19 06:53:47,712 | INFO     | . log creation = 0 s
[2025-04-19 08:54:07] 2025-04-19 06:53:47,712 | INFO     | ..............................
[2025-04-19 08:54:07] 2025-04-19 06:53:47,826 | INFO     | 
[2025-04-19 08:54:07] 2025-04-19 06:53:47,827 | INFO     | job summary report
[2025-04-19 08:54:07] 2025-04-19 06:53:47,827 | INFO     | --------------------------------------------------
[2025-04-19 08:54:07] 2025-04-19 06:53:47,827 | INFO     | PanDA job id: 6604952682
[2025-04-19 08:54:07] 2025-04-19 06:53:47,827 | INFO     | task id: 44075483
[2025-04-19 08:54:07] 2025-04-19 06:53:47,827 | INFO     | errors: (none)
[2025-04-19 08:54:07] 2025-04-19 06:53:47,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 08:54:07] 2025-04-19 06:53:47,828 | INFO     | pilot state: finished 
[2025-04-19 08:54:07] 2025-04-19 06:53:47,828 | INFO     | transexitcode: 0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,828 | INFO     | exeerrorcode: 0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,828 | INFO     | exeerrordiag: 
[2025-04-19 08:54:07] 2025-04-19 06:53:47,829 | INFO     | exitcode: 0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,829 | INFO     | exitmsg: OK
[2025-04-19 08:54:07] 2025-04-19 06:53:47,829 | INFO     | cpuconsumptiontime: 50960 s
[2025-04-19 08:54:07] 2025-04-19 06:53:47,829 | INFO     | nevents: 400
[2025-04-19 08:54:07] 2025-04-19 06:53:47,829 | INFO     | neventsw: 0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,830 | INFO     | pid: 2737119
[2025-04-19 08:54:07] 2025-04-19 06:53:47,830 | INFO     | pgrp: 2737119
[2025-04-19 08:54:07] 2025-04-19 06:53:47,830 | INFO     | corecount: 4
[2025-04-19 08:54:07] 2025-04-19 06:53:47,830 | INFO     | event service: False
[2025-04-19 08:54:07] 2025-04-19 06:53:47,830 | INFO     | sizes: {0: 2425945, 1: 2426812, 5: 2427018, 12: 2427074, 13961: 2457243, 13963: 2466206, 13966: 2466390, 13973: 2466560}
[2025-04-19 08:54:07] 2025-04-19 06:53:47,830 | INFO     | --------------------------------------------------
[2025-04-19 08:54:07] 2025-04-19 06:53:47,831 | INFO     | 
[2025-04-19 08:54:07] 2025-04-19 06:53:47,831 | INFO     | executing command: ls -lF /scratch/boinc/var/slot28/slots/0
[2025-04-19 08:54:07] 2025-04-19 06:53:47,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,851 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,852 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,852 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,852 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,852 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 08:54:07] 2025-04-19 06:53:47,853 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,853 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 08:54:07] 2025-04-19 06:53:47,853 | INFO     | job 6604952682 has completed (purged errors)
[2025-04-19 08:54:07] 2025-04-19 06:53:47,853 | INFO     | overall cleanup function is called
[2025-04-19 08:54:07] 2025-04-19 06:53:48,860 | INFO     | --- collectZombieJob: --- 10, [2737119]
[2025-04-19 08:54:07] 2025-04-19 06:53:48,861 | INFO     | zombie collector waiting for pid 2737119
[2025-04-19 08:54:07] 2025-04-19 06:53:48,861 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 08:54:07] 2025-04-19 06:53:48,861 | INFO     | collected zombie processes
[2025-04-19 08:54:07] 2025-04-19 06:53:48,861 | INFO     | will attempt to kill all subprocesses of pid=2737119
[2025-04-19 08:54:07] 2025-04-19 06:53:49,153 | INFO     | process IDs to be killed: [2737119] (in reverse order)
[2025-04-19 08:54:07] 2025-04-19 06:53:49,234 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 08:54:07] 2025-04-19 06:53:49,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 08:54:07] 2025-04-19 06:53:49,241 | INFO     | did not find any defunct processes belonging to 2737119
[2025-04-19 08:54:07] 2025-04-19 06:53:49,248 | INFO     | did not find any defunct processes belonging to 2737119
[2025-04-19 08:54:07] 2025-04-19 06:53:49,248 | INFO     | ready for new job
[2025-04-19 08:54:07] 2025-04-19 06:53:49,248 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 08:54:07] 2025-04-19 06:53:49,250 | INFO     | **************************************
[2025-04-19 08:54:07] 2025-04-19 06:53:49,250 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 08:54:07] 2025-04-19 06:53:49,250 | INFO     | **************************************
[2025-04-19 08:54:07] 2025-04-19 06:53:49,250 | INFO     | 
[2025-04-19 08:54:07] 2025-04-19 06:53:49,253 | INFO     | architecture information:
[2025-04-19 08:54:07] 2025-04-19 06:53:49,253 | INFO     | executing command: cat /etc/os-release
[2025-04-19 08:54:07] 2025-04-19 06:53:49,265 | INFO     | cat /etc/os-release:
[2025-04-19 08:54:07] NAME="CentOS Linux"
[2025-04-19 08:54:07] VERSION="7 (Core)"
[2025-04-19 08:54:07] ID="centos"
[2025-04-19 08:54:07] ID_LIKE="rhel fedora"
[2025-04-19 08:54:07] VERSION_ID="7"
[2025-04-19 08:54:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 08:54:07] ANSI_COLOR="0;31"
[2025-04-19 08:54:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 08:54:07] HOME_URL="https://www.centos.org/"
[2025-04-19 08:54:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 08:54:07] 
[2025-04-19 08:54:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 08:54:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 08:54:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 08:54:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 08:54:07] 
[2025-04-19 08:54:07] 2025-04-19 06:53:49,266 | INFO     | **************************************
[2025-04-19 08:54:07] 2025-04-19 06:53:49,717 | INFO     | PID=2719168 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-04-19 08:54:07] 2025-04-19 06:53:49,717 | INFO     | .. there are 7 such processes running
[2025-04-19 08:54:07] 2025-04-19 06:53:49,769 | INFO     | executing command: df -mP /scratch/boinc/var/slot28/slots/0
[2025-04-19 08:54:07] 2025-04-19 06:53:49,782 | INFO     | sufficient remaining disk space (1666211381248 B)
[2025-04-19 08:54:07] 2025-04-19 06:53:49,783 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 08:54:07] 2025-04-19 06:53:49,783 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 08:54:07] 2025-04-19 06:53:49,783 | INFO     | update_server=False
[2025-04-19 08:54:07] 2025-04-19 06:53:49,783 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 08:54:07] 2025-04-19 06:53:49,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 08:54:07] 2025-04-19 06:53:49,784 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 08:54:07] 2025-04-19 06:53:49,784 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-19 08:54:07] 2025-04-19 06:53:49,784 | INFO     | aborting loop
[2025-04-19 08:54:07] 2025-04-19 06:53:49,785 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 08:54:07] 2025-04-19 06:53:49,785 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 08:54:07] 2025-04-19 06:53:49,785 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 08:54:07] 2025-04-19 06:53:49,789 | INFO     | all job control threads have been joined
[2025-04-19 08:54:07] 2025-04-19 06:53:49,992 | INFO     | all data control threads have been joined
[2025-04-19 08:54:07] 2025-04-19 06:53:50,788 | INFO     | [job] queue monitor thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:50,788 | INFO     | [job] retrieve thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:50,789 | INFO     | [job] job monitor thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:50,790 | INFO     | [job] control thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:50,791 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:50,803 | INFO     | all payload control threads have been joined
[2025-04-19 08:54:07] 2025-04-19 06:53:50,997 | INFO     | [data] control thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:51,114 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 08:54:07] 2025-04-19 06:53:51,266 | INFO     | [job] validate thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:51,524 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:51,555 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:51,700 | INFO     | [data] copytool_in thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:51,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 08:54:07] 2025-04-19 06:53:51,809 | INFO     | [payload] control thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:51,873 | INFO     | [payload] validate_post thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:52,048 | INFO     | [payload] failed_post thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:53,119 | INFO     | [data] copytool_out thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:55,790 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:53:59,833 | INFO     | job.realtimelogging is not enabled
[2025-04-19 08:54:07] 2025-04-19 06:54:00,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 08:54:07] 2025-04-19 06:54:02,392 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23410818991936)>', '<ExcThread(monitor, started 23410503538432)>']
[2025-04-19 08:54:07] 2025-04-19 06:54:02,843 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 08:54:07] 2025-04-19 06:54:02,844 | INFO     | [monitor] control thread has ended
[2025-04-19 08:54:07] 2025-04-19 06:54:07,417 | INFO     | all workflow threads have been joined
[2025-04-19 08:54:07] 2025-04-19 06:54:07,417 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 08:54:07] 2025-04-19 06:54:07,418 | INFO     | traces error code: 0
[2025-04-19 08:54:07] 2025-04-19 06:54:07,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 08:54:07] 2025-04-19 06:54:07,541 [wrapper] ==== pilot stdout END ====
[2025-04-19 08:54:07] 2025-04-19 06:54:07,544 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 08:54:07] 2025-04-19 06:54:07,546 [wrapper] pilotpid: 2719168
[2025-04-19 08:54:07] 2025-04-19 06:54:07,548 [wrapper] Pilot exit status: 0
[2025-04-19 08:54:07] 2025-04-19 06:54:07,556 [wrapper] pandaids: 6604952682
[2025-04-19 08:54:07] 2025-04-19 06:54:07,602 [wrapper] cleanup supervisor_pilot 3095339 2719169
[2025-04-19 08:54:07] 2025-04-19 06:54:07,604 [wrapper] Test setup, not cleaning
[2025-04-19 08:54:07] 2025-04-19 06:54:07,607 [wrapper] apfmon messages muted
[2025-04-19 08:54:07] 2025-04-19 06:54:07,609 [wrapper] ==== wrapper stdout END ====
[2025-04-19 08:54:07] 2025-04-19 06:54:07,611 [wrapper] ==== wrapper stderr END ====
[2025-04-19 08:54:07]  *** Error codes and diagnostics ***
[2025-04-19 08:54:07]     "exeErrorCode": 0,
[2025-04-19 08:54:07]     "exeErrorDiag": "",
[2025-04-19 08:54:07]     "pilotErrorCode": 0,
[2025-04-19 08:54:07]     "pilotErrorDiag": "",
[2025-04-19 08:54:07]  *** Listing of results directory ***
[2025-04-19 08:54:07] total 415008
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc    495897 Apr 17 05:58 pilot3.tar.gz
[2025-04-19 08:54:07] -rwx------ 1 boinc boinc     37140 Apr 17 06:08 runpilot2-wrapper.sh
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc      5111 Apr 17 06:08 queuedata.json
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc       100 Apr 19 05:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 08:54:07] -rwxr-xr-x 1 boinc boinc      7986 Apr 19 05:00 run_atlas
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc       105 Apr 19 05:00 job.xml
[2025-04-19 08:54:07] -rw-r--r-- 2 boinc boinc 223680198 Apr 19 05:00 EVNT.44075481._001958.pool.root.1
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc      6421 Apr 19 05:00 init_data.xml
[2025-04-19 08:54:07] drwxrwx--x 2 boinc boinc      4096 Apr 19 05:00 shared
[2025-04-19 08:54:07] -rw-r--r-- 2 boinc boinc    508893 Apr 19 05:00 input.tar.gz
[2025-04-19 08:54:07] -rw-r--r-- 2 boinc boinc     17569 Apr 19 05:00 start_atlas.sh
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc         0 Apr 19 05:00 boinc_lockfile
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc      2578 Apr 19 05:00 pandaJob.out
[2025-04-19 08:54:07] -rw------- 1 boinc boinc       424 Apr 19 05:00 setup.sh.local
[2025-04-19 08:54:07] -rw------- 1 boinc boinc    991292 Apr 19 05:00 agis_schedconf.cvmfs.json
[2025-04-19 08:54:07] drwx------ 4 boinc boinc      4096 Apr 19 05:00 pilot3
[2025-04-19 08:54:07] -rw------- 1 boinc boinc 194104611 Apr 19 08:52 HITS.44075483._050182.pool.root.1
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc       529 Apr 19 08:53 boinc_task_state.xml
[2025-04-19 08:54:07] -rw------- 1 boinc boinc        95 Apr 19 08:53 pilot_heartbeat.json
[2025-04-19 08:54:07] -rw------- 1 boinc boinc      1039 Apr 19 08:53 memory_monitor_summary.json
[2025-04-19 08:54:07] -rw------- 1 boinc boinc   1618536 Apr 19 08:53 agis_ddmendpoints.agis.ALL.json
[2025-04-19 08:54:07] -rw------- 1 boinc boinc    347814 Apr 19 08:53 log.44075483._050182.job.log.tgz.1
[2025-04-19 08:54:07] -rw------- 1 boinc boinc      7728 Apr 19 08:53 heartbeat.json
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc        27 Apr 19 08:54 wrapper_checkpoint.txt
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc      8192 Apr 19 08:54 boinc_mmap_file
[2025-04-19 08:54:07] -rw------- 1 boinc boinc      4954 Apr 19 08:54 pilotlog.txt
[2025-04-19 08:54:07] -rw------- 1 boinc boinc   1311796 Apr 19 08:54 log.44075483._050182.job.log.1
[2025-04-19 08:54:07] -rw------- 1 boinc boinc       357 Apr 19 08:54 output.list
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc       620 Apr 19 08:54 runtime_log
[2025-04-19 08:54:07] -rw------- 1 boinc boinc   1679360 Apr 19 08:54 result.tar.gz
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc     11424 Apr 19 08:54 runtime_log.err
[2025-04-19 08:54:07] -rw------- 1 boinc boinc       665 Apr 19 08:54 QJBLDmKjVP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmQzbLDmt2vOzm.diag
[2025-04-19 08:54:07] -rw-r--r-- 1 boinc boinc     20730 Apr 19 08:54 stderr.txt
[2025-04-19 08:54:07] HITS file was successfully produced:
[2025-04-19 08:54:07] -rw------- 1 boinc boinc 194104611 Apr 19 08:52 shared/HITS.pool.root.1
[2025-04-19 08:54:07]  *** Contents of shared directory: ***
[2025-04-19 08:54:07] total 410160
[2025-04-19 08:54:07] -rw-r--r-- 2 boinc boinc 223680198 Apr 19 05:00 ATLAS.root_0
[2025-04-19 08:54:07] -rw-r--r-- 2 boinc boinc    508893 Apr 19 05:00 input.tar.gz
[2025-04-19 08:54:07] -rw-r--r-- 2 boinc boinc     17569 Apr 19 05:00 start_atlas.sh
[2025-04-19 08:54:07] -rw------- 1 boinc boinc 194104611 Apr 19 08:52 HITS.pool.root.1
[2025-04-19 08:54:07] -rw------- 1 boinc boinc   1679360 Apr 19 08:54 result.tar.gz
08:54:09 (2714209): run_atlas exited; CPU time 51477.379655
08:54:09 (2714209): called boinc_finish(0)

</stderr_txt>
]]>

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