Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:06:23 (41339): wrapper (7.7.26015): starting
03:06:23 (41339): wrapper: running run_atlas (--nthreads 8)
[2025-04-17 03:06:23] Arguments: --nthreads 8
[2025-04-17 03:06:23] Threads: 8
[2025-04-17 03:06:23] Checking for CVMFS
[2025-04-17 03:06:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 03:06:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 03:06:24] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 03:06:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 03:06:25] 2.11.2.0 26550 22079 105252 144952 0 262 16926610 18432000 12902 130560 0 47598251 98.430 153158999 37540 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 03:06:25] CVMFS is ok
[2025-04-17 03:06:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 03:06:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 03:06:25] Further information can be found at the LHC@home message board.
[2025-04-17 03:06:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 03:06:25] Checking for apptainer binary...
[2025-04-17 03:06:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 03:06:25] Running /usr/bin/apptainer --version
[2025-04-17 03:06:28] apptainer version 1.3.2-1.el7
[2025-04-17 03:06:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 03:06:40] c-211-8.aglt2.org
[2025-04-17 03:06:40] apptainer works
[2025-04-17 03:06:40] Set ATHENA_PROC_NUMBER=8
[2025-04-17 03:06:40] Set ATHENA_CORE_NUMBER=8
[2025-04-17 03:06:41] Starting ATLAS job with PandaID=6604907477
[2025-04-17 03:06:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 14:38:46]  *** The last 200 lines of the pilot log: ***
[2025-04-17 14:38:46] 2025-04-17 18:38:19,789 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 14:38:46] 2025-04-17 18:38:19,789 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 14:38:46] 2025-04-17 18:38:19,817 | INFO     | fitting pss+swap vs Time
[2025-04-17 14:38:46] 2025-04-17 18:38:19,821 | INFO     | sum of square deviations: 95791094818.38399
[2025-04-17 14:38:46] 2025-04-17 18:38:19,848 | INFO     | sum of deviations: 387529960042.18506
[2025-04-17 14:38:46] 2025-04-17 18:38:19,871 | INFO     | mean x: 1744894360.1908283
[2025-04-17 14:38:46] 2025-04-17 18:38:19,871 | INFO     | mean y: 2427918.223372781
[2025-04-17 14:38:46] 2025-04-17 18:38:19,871 | INFO     | -- intersect: -7056671290.9946785
[2025-04-17 14:38:46] 2025-04-17 18:38:19,871 | INFO     | intersect: -7056671290.9946785
[2025-04-17 14:38:46] 2025-04-17 18:38:19,872 | INFO     | chi2: 10.865670836201376
[2025-04-17 14:38:46] 2025-04-17 18:38:19,874 | INFO     | sum of square deviations: 93681411645.9795
[2025-04-17 14:38:46] 2025-04-17 18:38:19,898 | INFO     | sum of deviations: 611727633532.3699
[2025-04-17 14:38:46] 2025-04-17 18:38:19,901 | INFO     | mean x: 1744894207.6959763
[2025-04-17 14:38:46] 2025-04-17 18:38:19,901 | INFO     | mean y: 2444124.099850969
[2025-04-17 14:38:46] 2025-04-17 18:38:19,901 | INFO     | -- intersect: -11391491830.579033
[2025-04-17 14:38:46] 2025-04-17 18:38:19,901 | INFO     | intersect: -11391491830.579033
[2025-04-17 14:38:46] 2025-04-17 18:38:19,902 | INFO     | chi2: 6.849794944523573
[2025-04-17 14:38:46] 2025-04-17 18:38:19,905 | INFO     | current chi2=6.849794944523573 (change=36.959300094919385 %)
[2025-04-17 14:38:46] 2025-04-17 18:38:19,906 | INFO     | sum of square deviations: 91602815813.23283
[2025-04-17 14:38:46] 2025-04-17 18:38:19,917 | INFO     | monitor loop #2361: job 0:6604907477 is in state 'finished'
[2025-04-17 14:38:46] 2025-04-17 18:38:19,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 14:38:46] 2025-04-17 18:38:19,933 | INFO     | sum of deviations: 606523364394.2506
[2025-04-17 14:38:46] 2025-04-17 18:38:19,933 | INFO     | mean x: 1744894055.1966968
[2025-04-17 14:38:46] 2025-04-17 18:38:19,936 | INFO     | mean y: 2443742.295795796
[2025-04-17 14:38:46] 2025-04-17 18:38:19,936 | INFO     | -- intersect: -11550902118.023754
[2025-04-17 14:38:46] 2025-04-17 18:38:19,936 | INFO     | intersect: -11550902118.023754
[2025-04-17 14:38:46] 2025-04-17 18:38:19,937 | INFO     | chi2: 6.849918256405849
[2025-04-17 14:38:46] 2025-04-17 18:38:19,940 | INFO     | current chi2=6.849918256405849 (change=-0.0018002273538781834 %)
[2025-04-17 14:38:46] 2025-04-17 18:38:19,940 | INFO     | right removable region: 665
[2025-04-17 14:38:46] 2025-04-17 18:38:19,941 | INFO     | sum of square deviations: 93681126775.9795
[2025-04-17 14:38:46] 2025-04-17 18:38:19,967 | INFO     | sum of deviations: 205936698652.4351
[2025-04-17 14:38:46] 2025-04-17 18:38:19,968 | INFO     | mean x: 1744894512.6959763
[2025-04-17 14:38:46] 2025-04-17 18:38:19,968 | INFO     | mean y: 2441033.1982116243
[2025-04-17 14:38:46] 2025-04-17 18:38:19,968 | INFO     | -- intersect: -3833313593.244812
[2025-04-17 14:38:46] 2025-04-17 18:38:19,968 | INFO     | intersect: -3833313593.244812
[2025-04-17 14:38:46] 2025-04-17 18:38:19,971 | INFO     | chi2: 8.034495593841573
[2025-04-17 14:38:46] 2025-04-17 18:38:19,972 | INFO     | current chi2=8.034495593841573 (change=26.05614770628905 %)
[2025-04-17 14:38:46] 2025-04-17 18:38:19,975 | INFO     | sum of square deviations: 91602368621.03894
[2025-04-17 14:38:46] 2025-04-17 18:38:19,999 | INFO     | sum of deviations: 56626106213.87389
[2025-04-17 14:38:46] 2025-04-17 18:38:20,000 | INFO     | mean x: 1744894665.2012012
[2025-04-17 14:38:46] 2025-04-17 18:38:20,000 | INFO     | mean y: 2451987.1576576577
[2025-04-17 14:38:46] 2025-04-17 18:38:20,000 | INFO     | -- intersect: -1076194691.2101283
[2025-04-17 14:38:46] 2025-04-17 18:38:20,000 | INFO     | intersect: -1076194691.2101283
[2025-04-17 14:38:46] 2025-04-17 18:38:20,003 | INFO     | chi2: 6.239601768386365
[2025-04-17 14:38:46] 2025-04-17 18:38:20,004 | INFO     | current chi2=6.239601768386365 (change=22.339844542711447 %)
[2025-04-17 14:38:46] 2025-04-17 18:38:20,004 | INFO     | left removable region: 20
[2025-04-17 14:38:46] 2025-04-17 18:38:20,007 | INFO     | sum of square deviations: 83207616108.64491
[2025-04-17 14:38:46] 2025-04-17 18:38:20,028 | INFO     | sum of deviations: 66186527721.48217
[2025-04-17 14:38:46] 2025-04-17 18:38:20,031 | INFO     | mean x: 1744894634.7178295
[2025-04-17 14:38:46] 2025-04-17 18:38:20,031 | INFO     | mean y: 2484670.6015503877
[2025-04-17 14:38:46] 2025-04-17 18:38:20,031 | INFO     | -- intersect: -1385471414.584483
[2025-04-17 14:38:46] 2025-04-17 18:38:20,031 | INFO     | intersect: -1385471414.584483
[2025-04-17 14:38:46] 2025-04-17 18:38:20,032 | INFO     | chi2: 0.06486194586759406
[2025-04-17 14:38:46] 2025-04-17 18:38:20,035 | INFO     | -- intersect: -1385471414.584483
[2025-04-17 14:38:46] 2025-04-17 18:38:20,035 | INFO     | current memory leak: 0.80 B/s (using 645 data points, chi2=0.06)
[2025-04-17 14:38:46] 2025-04-17 18:38:20,036 | INFO     | ..............................
[2025-04-17 14:38:46] 2025-04-17 18:38:20,036 | INFO     | . Timing measurements:
[2025-04-17 14:38:46] 2025-04-17 18:38:20,036 | INFO     | . get job = 0 s
[2025-04-17 14:38:46] 2025-04-17 18:38:20,036 | INFO     | . initial setup = 4 s
[2025-04-17 14:38:46] 2025-04-17 18:38:20,039 | INFO     | . payload setup = 36 s
[2025-04-17 14:38:46] 2025-04-17 18:38:20,039 | INFO     | . stage-in = 0 s
[2025-04-17 14:38:46] 2025-04-17 18:38:20,039 | INFO     | . payload execution = 41242 s
[2025-04-17 14:38:46] 2025-04-17 18:38:20,039 | INFO     | . stage-out = 11 s
[2025-04-17 14:38:46] 2025-04-17 18:38:20,039 | INFO     | . log creation = 3 s
[2025-04-17 14:38:46] 2025-04-17 18:38:20,039 | INFO     | ..............................
[2025-04-17 14:38:46] 2025-04-17 18:38:20,880 | INFO     | 
[2025-04-17 14:38:46] 2025-04-17 18:38:20,881 | INFO     | job summary report
[2025-04-17 14:38:46] 2025-04-17 18:38:20,881 | INFO     | --------------------------------------------------
[2025-04-17 14:38:46] 2025-04-17 18:38:20,881 | INFO     | PanDA job id: 6604907477
[2025-04-17 14:38:46] 2025-04-17 18:38:20,881 | INFO     | task id: 44075483
[2025-04-17 14:38:46] 2025-04-17 18:38:20,881 | INFO     | errors: (none)
[2025-04-17 14:38:46] 2025-04-17 18:38:20,882 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 14:38:46] 2025-04-17 18:38:20,882 | INFO     | pilot state: finished 
[2025-04-17 14:38:46] 2025-04-17 18:38:20,882 | INFO     | transexitcode: 0
[2025-04-17 14:38:46] 2025-04-17 18:38:20,882 | INFO     | exeerrorcode: 0
[2025-04-17 14:38:46] 2025-04-17 18:38:20,882 | INFO     | exeerrordiag: 
[2025-04-17 14:38:46] 2025-04-17 18:38:20,882 | INFO     | exitcode: 0
[2025-04-17 14:38:46] 2025-04-17 18:38:20,883 | INFO     | exitmsg: OK
[2025-04-17 14:38:46] 2025-04-17 18:38:20,883 | INFO     | cpuconsumptiontime: 59023 s
[2025-04-17 14:38:46] 2025-04-17 18:38:20,883 | INFO     | nevents: 400
[2025-04-17 14:38:46] 2025-04-17 18:38:20,883 | INFO     | neventsw: 0
[2025-04-17 14:38:46] 2025-04-17 18:38:20,883 | INFO     | pid: 14582
[2025-04-17 14:38:46] 2025-04-17 18:38:20,883 | INFO     | pgrp: 14582
[2025-04-17 14:38:46] 2025-04-17 18:38:20,884 | INFO     | corecount: 8
[2025-04-17 14:38:46] 2025-04-17 18:38:20,884 | INFO     | event service: False
[2025-04-17 14:38:46] 2025-04-17 18:38:20,884 | INFO     | sizes: {0: 2420594, 1: 2420793, 12: 2420793, 23: 2420821, 25: 2421055, 33: 2421083, 41284: 2463050, 41285: 2463049, 41297: 2478054, 41298: 2478110, 41379: 2478280}
[2025-04-17 14:38:46] 2025-04-17 18:38:20,884 | INFO     | --------------------------------------------------
[2025-04-17 14:38:46] 2025-04-17 18:38:20,884 | INFO     | 
[2025-04-17 14:38:46] 2025-04-17 18:38:20,885 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 14:38:46] 2025-04-17 18:38:21,043 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,043 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,043 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,043 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,046 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,048 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,048 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,048 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,048 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,048 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,052 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,052 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,057 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,057 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 14:38:46] 2025-04-17 18:38:21,057 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,057 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 14:38:46] 2025-04-17 18:38:21,058 | INFO     | job 6604907477 has completed (purged errors)
[2025-04-17 14:38:46] 2025-04-17 18:38:21,062 | INFO     | overall cleanup function is called
[2025-04-17 14:38:46] 2025-04-17 18:38:22,083 | INFO     | --- collectZombieJob: --- 10, [14582]
[2025-04-17 14:38:46] 2025-04-17 18:38:22,083 | INFO     | zombie collector waiting for pid 14582
[2025-04-17 14:38:46] 2025-04-17 18:38:22,083 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 14:38:46] 2025-04-17 18:38:22,083 | INFO     | collected zombie processes
[2025-04-17 14:38:46] 2025-04-17 18:38:22,083 | INFO     | will attempt to kill all subprocesses of pid=14582
[2025-04-17 14:38:46] 2025-04-17 18:38:24,281 | INFO     | process IDs to be killed: [14582] (in reverse order)
[2025-04-17 14:38:46] 2025-04-17 18:38:26,379 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 14:38:46] 2025-04-17 18:38:26,380 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 14:38:46] 2025-04-17 18:38:26,515 | INFO     | did not find any defunct processes belonging to 14582
[2025-04-17 14:38:46] 2025-04-17 18:38:26,650 | INFO     | did not find any defunct processes belonging to 14582
[2025-04-17 14:38:46] 2025-04-17 18:38:26,650 | INFO     | ready for new job
[2025-04-17 14:38:46] 2025-04-17 18:38:26,650 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 14:38:46] 2025-04-17 18:38:26,738 | INFO     | **************************************
[2025-04-17 14:38:46] 2025-04-17 18:38:26,738 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 14:38:46] 2025-04-17 18:38:26,739 | INFO     | **************************************
[2025-04-17 14:38:46] 2025-04-17 18:38:26,739 | INFO     | 
[2025-04-17 14:38:46] 2025-04-17 18:38:26,780 | INFO     | architecture information:
[2025-04-17 14:38:46] 2025-04-17 18:38:26,832 | INFO     | executing command: cat /etc/os-release
[2025-04-17 14:38:46] 2025-04-17 18:38:27,201 | INFO     | cat /etc/os-release:
[2025-04-17 14:38:46] NAME="CentOS Linux"
[2025-04-17 14:38:46] VERSION="7 (Core)"
[2025-04-17 14:38:46] ID="centos"
[2025-04-17 14:38:46] ID_LIKE="rhel fedora"
[2025-04-17 14:38:46] VERSION_ID="7"
[2025-04-17 14:38:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 14:38:46] ANSI_COLOR="0;31"
[2025-04-17 14:38:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 14:38:46] HOME_URL="https://www.centos.org/"
[2025-04-17 14:38:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 14:38:46] 
[2025-04-17 14:38:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 14:38:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 14:38:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 14:38:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 14:38:46] 
[2025-04-17 14:38:46] 2025-04-17 18:38:27,202 | INFO     | **************************************
[2025-04-17 14:38:46] 2025-04-17 18:38:27,722 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 14:38:46] 2025-04-17 18:38:27,734 | INFO     | PID=4533 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-04-17 14:38:46] 2025-04-17 18:38:27,736 | INFO     | .. there are 16 such processes running
[2025-04-17 14:38:46] 2025-04-17 18:38:27,883 | INFO     | sufficient remaining disk space (56304336896 B)
[2025-04-17 14:38:46] 2025-04-17 18:38:27,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 14:38:46] 2025-04-17 18:38:27,884 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 14:38:46] 2025-04-17 18:38:27,885 | INFO     | update_server=False
[2025-04-17 14:38:46] 2025-04-17 18:38:27,885 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 14:38:46] 2025-04-17 18:38:27,885 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 14:38:46] 2025-04-17 18:38:27,886 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 14:38:46] 2025-04-17 18:38:27,886 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 14:38:46] 2025-04-17 18:38:27,887 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 14:38:46] 2025-04-17 18:38:27,887 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 14:38:46] 2025-04-17 18:38:27,994 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 14:38:46] 2025-04-17 18:38:28,265 | INFO     | all data control threads have been joined
[2025-04-17 14:38:46] 2025-04-17 18:38:28,467 | INFO     | all job control threads have been joined
[2025-04-17 14:38:46] 2025-04-17 18:38:28,666 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 14:38:46] 2025-04-17 18:38:28,666 | INFO     | aborting loop
[2025-04-17 14:38:46] 2025-04-17 18:38:28,890 | INFO     | [job] retrieve thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:28,914 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:28,974 | INFO     | all payload control threads have been joined
[2025-04-17 14:38:46] 2025-04-17 18:38:29,000 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:29,271 | INFO     | [data] control thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:29,314 | INFO     | [payload] failed_post thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:29,320 | INFO     | [payload] validate_post thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:29,500 | INFO     | [job] control thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:29,675 | INFO     | [job] job monitor thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:29,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:29,930 | INFO     | [data] copytool_in thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:29,936 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:29,981 | INFO     | [payload] control thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:30,001 | INFO     | [data] copytool_out thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:30,140 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 14:38:46] 2025-04-17 18:38:30,269 | INFO     | [job] validate thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:31,145 | INFO     | [job] queue monitor thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:31,892 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 14:38:46] 2025-04-17 18:38:31,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139785407821632)>', '<ExcThread(monitor, started 139785096107776)>']
[2025-04-17 14:38:46] 2025-04-17 18:38:32,912 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 14:38:46] 2025-04-17 18:38:32,917 | INFO     | [monitor] control thread has ended
[2025-04-17 14:38:46] 2025-04-17 18:38:36,995 | INFO     | all workflow threads have been joined
[2025-04-17 14:38:46] 2025-04-17 18:38:36,995 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 14:38:46] 2025-04-17 18:38:36,995 | INFO     | traces error code: 0
[2025-04-17 14:38:46] 2025-04-17 18:38:36,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 14:38:46] 2025-04-17 18:38:38,847 [wrapper] ==== pilot stdout END ====
[2025-04-17 14:38:46] 2025-04-17 18:38:38,978 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 14:38:46] 2025-04-17 18:38:39,049 [wrapper] pilotpid: 4533
[2025-04-17 14:38:46] 2025-04-17 18:38:39,199 [wrapper] Pilot exit status: 0
[2025-04-17 14:38:46] 2025-04-17 18:38:39,446 [wrapper] pandaids: 6604907477
[2025-04-17 14:38:46] 2025-04-17 18:38:40,871 [wrapper] cleanup supervisor_pilot  3200 4534
[2025-04-17 14:38:46] 2025-04-17 18:38:40,963 [wrapper] Test setup, not cleaning
[2025-04-17 14:38:46] 2025-04-17 18:38:41,055 [wrapper] apfmon messages muted
[2025-04-17 14:38:46] 2025-04-17 18:38:41,097 [wrapper] ==== wrapper stdout END ====
[2025-04-17 14:38:46] 2025-04-17 18:38:41,243 [wrapper] ==== wrapper stderr END ====
[2025-04-17 14:38:46]  *** Error codes and diagnostics ***
[2025-04-17 14:38:46]     "exeErrorCode": 0,
[2025-04-17 14:38:46]     "exeErrorDiag": "",
[2025-04-17 14:38:46]     "pilotErrorCode": 0,
[2025-04-17 14:38:46]     "pilotErrorDiag": "",
[2025-04-17 14:38:46]  *** Listing of results directory ***
[2025-04-17 14:38:46] total 413908
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 23:58 pilot3.tar.gz
[2025-04-17 14:38:46] -rwx------ 1 boincer umatlas     37140 Apr 17 00:00 runpilot2-wrapper.sh
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas      5111 Apr 17 00:00 queuedata.json
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas       100 Apr 17 03:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 14:38:46] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 03:06 run_atlas
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas       105 Apr 17 03:06 job.xml
[2025-04-17 14:38:46] -rw-r--r-- 2 boincer umatlas 223890185 Apr 17 03:06 EVNT.44075481._001954.pool.root.1
[2025-04-17 14:38:46] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 03:06 start_atlas.sh
[2025-04-17 14:38:46] drwxrwx--x 2 boincer umatlas      4096 Apr 17 03:06 shared
[2025-04-17 14:38:46] -rw-r--r-- 2 boincer umatlas    508886 Apr 17 03:06 input.tar.gz
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas         0 Apr 17 03:06 boinc_lockfile
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas      2578 Apr 17 03:06 pandaJob.out
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas       467 Apr 17 03:06 setup.sh.local
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas    986440 Apr 17 03:07 agis_schedconf.cvmfs.json
[2025-04-17 14:38:46] drwx------ 4 boincer umatlas      4096 Apr 17 03:07 pilot3
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas 188497995 Apr 17 14:30 HITS.44075483._050039.pool.root.1
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas       531 Apr 17 14:31 boinc_task_state.xml
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas      1057 Apr 17 14:36 memory_monitor_summary.json
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas      6133 Apr 17 14:36 init_data.xml
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas   1618536 Apr 17 14:36 agis_ddmendpoints.agis.ALL.json
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas    612393 Apr 17 14:36 log.44075483._050039.job.log.tgz.1
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas        95 Apr 17 14:37 pilot_heartbeat.json
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas      7755 Apr 17 14:38 heartbeat.json
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas      4868 Apr 17 14:38 pilotlog.txt
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 14:38 boinc_mmap_file
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas        28 Apr 17 14:38 wrapper_checkpoint.txt
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas   3194581 Apr 17 14:38 log.44075483._050039.job.log.1
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas       357 Apr 17 14:38 output.list
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas       620 Apr 17 14:38 runtime_log
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas   3829760 Apr 17 14:38 result.tar.gz
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas     11414 Apr 17 14:38 runtime_log.err
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas       663 Apr 17 14:38 JffLDmMbVP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmOxbLDmD0Pc0n.diag
[2025-04-17 14:38:46] -rw-r--r-- 1 boincer umatlas      2136 Apr 17 14:38 stderr.txt
[2025-04-17 14:38:46] HITS file was successfully produced:
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas 188497995 Apr 17 14:30 shared/HITS.pool.root.1
[2025-04-17 14:38:46]  *** Contents of shared directory: ***
[2025-04-17 14:38:46] total 406992
[2025-04-17 14:38:46] -rw-r--r-- 2 boincer umatlas 223890185 Apr 17 03:06 ATLAS.root_0
[2025-04-17 14:38:46] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 03:06 start_atlas.sh
[2025-04-17 14:38:46] -rw-r--r-- 2 boincer umatlas    508886 Apr 17 03:06 input.tar.gz
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas 188497995 Apr 17 14:30 HITS.pool.root.1
[2025-04-17 14:38:46] -rw------- 1 boincer umatlas   3829760 Apr 17 14:38 result.tar.gz
14:38:47 (41339): run_atlas exited; CPU time 60250.674986
14:38:47 (41339): called boinc_finish(0)

</stderr_txt>
]]>

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