Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:41:24 (2291371): wrapper (7.7.26015): starting
09:41:24 (2291371): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 09:41:24] Arguments: --nthreads 12
[2025-04-17 09:41:24] Threads: 12
[2025-04-17 09:41:24] Checking for CVMFS
[2025-04-17 09:41:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 09:41:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 09:41:25] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 09:41:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 09:41:26] 2.11.5.0 3686 20140 330748 144972 3 293 34247212 45568000 14297 130560 0 130567694 99.731 108566649 21180 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-17 09:41:26] CVMFS is ok
[2025-04-17 09:41:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 09:41:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 09:41:26] Further information can be found at the LHC@home message board.
[2025-04-17 09:41:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 09:41:26] Checking for apptainer binary...
[2025-04-17 09:41:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 09:41:26] Running /usr/bin/apptainer --version
[2025-04-17 09:41:26] apptainer version 1.3.5-1.el9
[2025-04-17 09:41:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 09:41:26] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0098.triumf.lcg
[2025-04-17 09:41:26] apptainer works
[2025-04-17 09:41:26] Set ATHENA_PROC_NUMBER=12
[2025-04-17 09:41:26] Set ATHENA_CORE_NUMBER=12
[2025-04-17 09:41:26] Starting ATLAS job with PandaID=6604897179
[2025-04-17 09:41:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 13:36:47]  *** The last 200 lines of the pilot log: ***
[2025-04-17 13:36:47] 2025-04-17 20:36:32,471 | INFO     | mean y: 2616665.513157895
[2025-04-17 13:36:47] 2025-04-17 20:36:32,471 | INFO     | -- intersect: -60104637194.86439
[2025-04-17 13:36:47] 2025-04-17 20:36:32,471 | INFO     | intersect: -60104637194.86439
[2025-04-17 13:36:47] 2025-04-17 20:36:32,471 | INFO     | chi2: 6.372445917810087
[2025-04-17 13:36:47] 2025-04-17 20:36:32,471 | INFO     | sum of square deviations: 3438690956.044834
[2025-04-17 13:36:47] 2025-04-17 20:36:32,472 | INFO     | sum of deviations: 138907560787.01352
[2025-04-17 13:36:47] 2025-04-17 20:36:32,472 | INFO     | mean x: 1744915042.5874438
[2025-04-17 13:36:47] 2025-04-17 20:36:32,472 | INFO     | mean y: 2624422.076233184
[2025-04-17 13:36:47] 2025-04-17 20:36:32,473 | INFO     | -- intersect: -70484050723.97299
[2025-04-17 13:36:47] 2025-04-17 20:36:32,473 | INFO     | intersect: -70484050723.97299
[2025-04-17 13:36:47] 2025-04-17 20:36:32,473 | INFO     | chi2: 5.69832352570331
[2025-04-17 13:36:47] 2025-04-17 20:36:32,473 | INFO     | current chi2=5.69832352570331 (change=10.578707152660186 %)
[2025-04-17 13:36:47] 2025-04-17 20:36:32,473 | INFO     | right removable region: 222
[2025-04-17 13:36:47] 2025-04-17 20:36:32,473 | INFO     | sum of square deviations: 3438611046.044834
[2025-04-17 13:36:47] 2025-04-17 20:36:32,474 | INFO     | sum of deviations: 59444650418.90579
[2025-04-17 13:36:47] 2025-04-17 20:36:32,474 | INFO     | mean x: 1744915347.5874438
[2025-04-17 13:36:47] 2025-04-17 20:36:32,475 | INFO     | mean y: 2659849.466367713
[2025-04-17 13:36:47] 2025-04-17 20:36:32,475 | INFO     | -- intersect: -30162392684.528973
[2025-04-17 13:36:47] 2025-04-17 20:36:32,475 | INFO     | intersect: -30162392684.528973
[2025-04-17 13:36:47] 2025-04-17 20:36:32,475 | INFO     | chi2: 3.2557436460128986
[2025-04-17 13:36:47] 2025-04-17 20:36:32,475 | INFO     | current chi2=3.2557436460128986 (change=48.90904233626284 %)
[2025-04-17 13:36:47] 2025-04-17 20:36:32,475 | INFO     | sum of square deviations: 3212418011.7798123
[2025-04-17 13:36:47] 2025-04-17 20:36:32,476 | INFO     | sum of deviations: 14833401098.201866
[2025-04-17 13:36:47] 2025-04-17 20:36:32,476 | INFO     | mean x: 1744915500.1009173
[2025-04-17 13:36:47] 2025-04-17 20:36:32,476 | INFO     | mean y: 2689912.490825688
[2025-04-17 13:36:47] 2025-04-17 20:36:32,476 | INFO     | -- intersect: -8054490504.427002
[2025-04-17 13:36:47] 2025-04-17 20:36:32,477 | INFO     | intersect: -8054490504.427002
[2025-04-17 13:36:47] 2025-04-17 20:36:32,477 | INFO     | chi2: 1.975918950065727
[2025-04-17 13:36:47] 2025-04-17 20:36:32,477 | INFO     | current chi2=1.975918950065727 (change=39.30975024751998 %)
[2025-04-17 13:36:47] 2025-04-17 20:36:32,477 | INFO     | sum of square deviations: 2996364702.4319205
[2025-04-17 13:36:47] 2025-04-17 20:36:32,478 | INFO     | sum of deviations: -23888617476.722996
[2025-04-17 13:36:47] 2025-04-17 20:36:32,478 | INFO     | mean x: 1744915652.6150234
[2025-04-17 13:36:47] 2025-04-17 20:36:32,478 | INFO     | mean y: 2717213.600938967
[2025-04-17 13:36:47] 2025-04-17 20:36:32,478 | INFO     | -- intersect: 13914115422.448929
[2025-04-17 13:36:47] 2025-04-17 20:36:32,478 | INFO     | intersect: 13914115422.448929
[2025-04-17 13:36:47] 2025-04-17 20:36:32,479 | INFO     | chi2: 0.9708929360397953
[2025-04-17 13:36:47] 2025-04-17 20:36:32,479 | INFO     | current chi2=0.9708929360397953 (change=50.863726672214995 %)
[2025-04-17 13:36:47] 2025-04-17 20:36:32,479 | INFO     | sum of square deviations: 2790218555.4951835
[2025-04-17 13:36:47] 2025-04-17 20:36:32,480 | INFO     | sum of deviations: -33100000089.490387
[2025-04-17 13:36:47] 2025-04-17 20:36:32,480 | INFO     | mean x: 1744915805.1298077
[2025-04-17 13:36:47] 2025-04-17 20:36:32,480 | INFO     | mean y: 2723978.2403846155
[2025-04-17 13:36:47] 2025-04-17 20:36:32,480 | INFO     | -- intersect: 20702433394.264847
[2025-04-17 13:36:47] 2025-04-17 20:36:32,480 | INFO     | intersect: 20702433394.264847
[2025-04-17 13:36:47] 2025-04-17 20:36:32,480 | INFO     | chi2: 0.8785107276691944
[2025-04-17 13:36:47] 2025-04-17 20:36:32,481 | INFO     | current chi2=0.8785107276691944 (change=9.515179783614613 %)
[2025-04-17 13:36:47] 2025-04-17 20:36:32,481 | INFO     | left removable region: 40
[2025-04-17 13:36:47] 2025-04-17 20:36:32,481 | INFO     | sum of square deviations: 1869138646.373629
[2025-04-17 13:36:47] 2025-04-17 20:36:32,482 | INFO     | sum of deviations: 4179524253.7582436
[2025-04-17 13:36:47] 2025-04-17 20:36:32,482 | INFO     | mean x: 1744916232.1758242
[2025-04-17 13:36:47] 2025-04-17 20:36:32,482 | INFO     | mean y: 2715852.445054945
[2025-04-17 13:36:47] 2025-04-17 20:36:32,482 | INFO     | -- intersect: -3899038427.4231167
[2025-04-17 13:36:47] 2025-04-17 20:36:32,482 | INFO     | intersect: -3899038427.4231167
[2025-04-17 13:36:47] 2025-04-17 20:36:32,482 | INFO     | chi2: 0.0012914564635589233
[2025-04-17 13:36:47] 2025-04-17 20:36:32,482 | INFO     | -- intersect: -3899038427.4231167
[2025-04-17 13:36:47] 2025-04-17 20:36:32,482 | INFO     | current memory leak: 2.24 B/s (using 182 data points, chi2=0.00)
[2025-04-17 13:36:47] 2025-04-17 20:36:32,483 | INFO     | ..............................
[2025-04-17 13:36:47] 2025-04-17 20:36:32,483 | INFO     | . Timing measurements:
[2025-04-17 13:36:47] 2025-04-17 20:36:32,483 | INFO     | . get job = 0 s
[2025-04-17 13:36:47] 2025-04-17 20:36:32,483 | INFO     | . initial setup = 5 s
[2025-04-17 13:36:47] 2025-04-17 20:36:32,483 | INFO     | . payload setup = 42 s
[2025-04-17 13:36:47] 2025-04-17 20:36:32,483 | INFO     | . stage-in = 0 s
[2025-04-17 13:36:47] 2025-04-17 20:36:32,483 | INFO     | . payload execution = 13914 s
[2025-04-17 13:36:47] 2025-04-17 20:36:32,483 | INFO     | . stage-out = 3 s
[2025-04-17 13:36:47] 2025-04-17 20:36:32,483 | INFO     | . log creation = 0 s
[2025-04-17 13:36:47] 2025-04-17 20:36:32,484 | INFO     | ..............................
[2025-04-17 13:36:47] 2025-04-17 20:36:32,581 | INFO     | 
[2025-04-17 13:36:47] 2025-04-17 20:36:32,581 | INFO     | job summary report
[2025-04-17 13:36:47] 2025-04-17 20:36:32,581 | INFO     | --------------------------------------------------
[2025-04-17 13:36:47] 2025-04-17 20:36:32,581 | INFO     | PanDA job id: 6604897179
[2025-04-17 13:36:47] 2025-04-17 20:36:32,581 | INFO     | task id: 44075483
[2025-04-17 13:36:47] 2025-04-17 20:36:32,581 | INFO     | errors: (none)
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | pilot state: finished 
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | transexitcode: 0
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | exeerrorcode: 0
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | exeerrordiag: 
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | exitcode: 0
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | exitmsg: OK
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | cpuconsumptiontime: 34196 s
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | nevents: 400
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | neventsw: 0
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | pid: 2312927
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | pgrp: 2312927
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | corecount: 12
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | event service: False
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | sizes: {0: 2425995, 1: 2426677, 2: 2426876, 3: 2426876, 14: 2426904, 25: 2426932, 34: 2427294, 36: 2427322, 13961: 2457259, 13962: 2457258, 13967: 2466249, 13970: 
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | --------------------------------------------------
[2025-04-17 13:36:47] 2025-04-17 20:36:32,582 | INFO     | 
[2025-04-17 13:36:47] 2025-04-17 20:36:32,583 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-17 13:36:47] 2025-04-17 20:36:32,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,600 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 13:36:47] 2025-04-17 20:36:32,601 | INFO     | job 6604897179 has completed (purged errors)
[2025-04-17 13:36:47] 2025-04-17 20:36:32,601 | INFO     | overall cleanup function is called
[2025-04-17 13:36:47] 2025-04-17 20:36:33,609 | INFO     | --- collectZombieJob: --- 10, [2312927]
[2025-04-17 13:36:47] 2025-04-17 20:36:33,609 | INFO     | zombie collector waiting for pid 2312927
[2025-04-17 13:36:47] 2025-04-17 20:36:33,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 13:36:47] 2025-04-17 20:36:33,609 | INFO     | collected zombie processes
[2025-04-17 13:36:47] 2025-04-17 20:36:33,609 | INFO     | will attempt to kill all subprocesses of pid=2312927
[2025-04-17 13:36:47] 2025-04-17 20:36:33,977 | INFO     | process IDs to be killed: [2312927] (in reverse order)
[2025-04-17 13:36:47] 2025-04-17 20:36:34,257 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 13:36:47] 2025-04-17 20:36:34,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 13:36:47] 2025-04-17 20:36:34,282 | INFO     | did not find any defunct processes belonging to 2312927
[2025-04-17 13:36:47] 2025-04-17 20:36:34,310 | INFO     | did not find any defunct processes belonging to 2312927
[2025-04-17 13:36:47] 2025-04-17 20:36:34,310 | INFO     | ready for new job
[2025-04-17 13:36:47] 2025-04-17 20:36:34,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 13:36:47] 2025-04-17 20:36:34,312 | INFO     | **************************************
[2025-04-17 13:36:47] 2025-04-17 20:36:34,312 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 13:36:47] 2025-04-17 20:36:34,312 | INFO     | **************************************
[2025-04-17 13:36:47] 2025-04-17 20:36:34,312 | INFO     | 
[2025-04-17 13:36:47] 2025-04-17 20:36:34,315 | INFO     | architecture information:
[2025-04-17 13:36:47] 2025-04-17 20:36:34,318 | INFO     | executing command: cat /etc/os-release
[2025-04-17 13:36:47] 2025-04-17 20:36:34,353 | INFO     | cat /etc/os-release:
[2025-04-17 13:36:47] NAME="CentOS Linux"
[2025-04-17 13:36:47] VERSION="7 (Core)"
[2025-04-17 13:36:47] ID="centos"
[2025-04-17 13:36:47] ID_LIKE="rhel fedora"
[2025-04-17 13:36:47] VERSION_ID="7"
[2025-04-17 13:36:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 13:36:47] ANSI_COLOR="0;31"
[2025-04-17 13:36:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 13:36:47] HOME_URL="https://www.centos.org/"
[2025-04-17 13:36:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 13:36:47] 
[2025-04-17 13:36:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 13:36:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 13:36:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 13:36:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 13:36:47] 
[2025-04-17 13:36:47] 2025-04-17 20:36:34,354 | INFO     | **************************************
[2025-04-17 13:36:47] 2025-04-17 20:36:34,857 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-17 13:36:47] 2025-04-17 20:36:34,925 | INFO     | sufficient remaining disk space (2026786258944 B)
[2025-04-17 13:36:47] 2025-04-17 20:36:34,925 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 13:36:47] 2025-04-17 20:36:34,925 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 13:36:47] 2025-04-17 20:36:34,926 | INFO     | update_server=False
[2025-04-17 13:36:47] 2025-04-17 20:36:34,926 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 13:36:47] 2025-04-17 20:36:34,931 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 13:36:47] 2025-04-17 20:36:34,931 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 13:36:47] 2025-04-17 20:36:34,932 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 13:36:47] 2025-04-17 20:36:34,932 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 13:36:47] 2025-04-17 20:36:34,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 13:36:47] 2025-04-17 20:36:35,031 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-17 13:36:47] 2025-04-17 20:36:35,031 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-17 13:36:47] 2025-04-17 20:36:35,031 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 13:36:47] 2025-04-17 20:36:35,032 | INFO     | will abort loop
[2025-04-17 13:36:47] 2025-04-17 20:36:35,267 | INFO     | all data control threads have been joined
[2025-04-17 13:36:47] 2025-04-17 20:36:35,494 | INFO     | all payload control threads have been joined
[2025-04-17 13:36:47] 2025-04-17 20:36:35,636 | INFO     | all job control threads have been joined
[2025-04-17 13:36:47] 2025-04-17 20:36:35,931 | INFO     | [job] retrieve thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:35,968 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 13:36:47] 2025-04-17 20:36:35,993 | INFO     | [payload] failed_post thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:36,020 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:36,040 | INFO     | [job] job monitor thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:36,211 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:36,273 | INFO     | [data] control thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:36,500 | INFO     | [payload] control thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:36,601 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:36,642 | INFO     | [job] control thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:36,698 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:37,080 | INFO     | [data] copytool_in thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:37,163 | INFO     | [job] validate thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:37,356 | INFO     | [payload] validate_post thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:37,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 13:36:47] 2025-04-17 20:36:37,985 | INFO     | [data] copytool_out thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:38,608 | INFO     | [job] queue monitor thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:38,943 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 13:36:47] 2025-04-17 20:36:40,831 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140074192406336)>', '<ExcThread(monitor, started 140073871841024)>']
[2025-04-17 13:36:47] 2025-04-17 20:36:40,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 13:36:47] 2025-04-17 20:36:40,982 | INFO     | [monitor] control thread has ended
[2025-04-17 13:36:47] 2025-04-17 20:36:45,857 | INFO     | all workflow threads have been joined
[2025-04-17 13:36:47] 2025-04-17 20:36:45,857 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 13:36:47] 2025-04-17 20:36:45,858 | INFO     | traces error code: 0
[2025-04-17 13:36:47] 2025-04-17 20:36:45,858 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 13:36:47] 2025-04-17 20:36:46,143 [wrapper] ==== pilot stdout END ====
[2025-04-17 13:36:47] 2025-04-17 20:36:46,173 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 13:36:47] 2025-04-17 20:36:46,232 [wrapper] pilotpid: 2300775
[2025-04-17 13:36:47] 2025-04-17 20:36:46,252 [wrapper] Pilot exit status: 0
[2025-04-17 13:36:47] 2025-04-17 20:36:46,395 [wrapper] pandaids: 6604897179
[2025-04-17 13:36:47] 2025-04-17 20:36:46,969 [wrapper] cleanup supervisor_pilot 3680550 2300776
[2025-04-17 13:36:47] 2025-04-17 20:36:46,991 [wrapper] Test setup, not cleaning
[2025-04-17 13:36:47] 2025-04-17 20:36:47,035 [wrapper] apfmon messages muted
[2025-04-17 13:36:47] 2025-04-17 20:36:47,054 [wrapper] ==== wrapper stdout END ====
[2025-04-17 13:36:47] 2025-04-17 20:36:47,119 [wrapper] ==== wrapper stderr END ====
[2025-04-17 13:36:47]  *** Error codes and diagnostics ***
[2025-04-17 13:36:47]     "exeErrorCode": 0,
[2025-04-17 13:36:47]     "exeErrorDiag": "",
[2025-04-17 13:36:47]     "pilotErrorCode": 0,
[2025-04-17 13:36:47]     "pilotErrorDiag": "",
[2025-04-17 13:36:47]  *** Listing of results directory ***
[2025-04-17 13:36:47] total 417192
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc    495897 Apr 16 19:50 pilot3.tar.gz
[2025-04-17 13:36:47] -rwx------. 1 boinc boinc     37140 Apr 16 20:07 runpilot2-wrapper.sh
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc      5111 Apr 16 20:07 queuedata.json
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc       100 Apr 17 09:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 13:36:47] -rwxr-xr-x. 1 boinc boinc      7986 Apr 17 09:41 run_atlas
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc       105 Apr 17 09:41 job.xml
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc      6597 Apr 17 09:41 init_data.xml
[2025-04-17 13:36:47] -rw-r--r--. 2 boinc boinc 223168548 Apr 17 09:41 EVNT.44075481._001933.pool.root.1
[2025-04-17 13:36:47] drwxrwx--x. 2 boinc boinc      4096 Apr 17 09:41 shared
[2025-04-17 13:36:47] -rw-r--r--. 2 boinc boinc    508890 Apr 17 09:41 input.tar.gz
[2025-04-17 13:36:47] -rw-r--r--. 2 boinc boinc     17569 Apr 17 09:41 start_atlas.sh
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc         0 Apr 17 09:41 boinc_lockfile
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc      2578 Apr 17 09:41 pandaJob.out
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc       424 Apr 17 09:41 setup.sh.local
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc    990266 Apr 17 09:42 agis_schedconf.cvmfs.json
[2025-04-17 13:36:47] drwx------. 4 boinc boinc      4096 Apr 17 09:42 pilot3
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc 197057554 Apr 17 13:34 HITS.44075483._049512.pool.root.1
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc       531 Apr 17 13:35 boinc_task_state.xml
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc      1044 Apr 17 13:35 memory_monitor_summary.json
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc   1618536 Apr 17 13:36 agis_ddmendpoints.agis.ALL.json
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc    442794 Apr 17 13:36 log.44075483._049512.job.log.tgz.1
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc        95 Apr 17 13:36 pilot_heartbeat.json
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc      7728 Apr 17 13:36 heartbeat.json
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc      8192 Apr 17 13:36 boinc_mmap_file
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc        28 Apr 17 13:36 wrapper_checkpoint.txt
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc      4661 Apr 17 13:36 pilotlog.txt
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc   1115607 Apr 17 13:36 log.44075483._049512.job.log.1
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc       357 Apr 17 13:36 output.list
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc       620 Apr 17 13:36 runtime_log
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc   1576960 Apr 17 13:36 result.tar.gz
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc     11145 Apr 17 13:36 runtime_log.err
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc       662 Apr 17 13:36 kj5NDmcmUP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmzQ3KDmsqJJon.diag
[2025-04-17 13:36:47] -rw-r--r--. 1 boinc boinc     21104 Apr 17 13:36 stderr.txt
[2025-04-17 13:36:47] HITS file was successfully produced:
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc 197057554 Apr 17 13:34 shared/HITS.pool.root.1
[2025-04-17 13:36:47]  *** Contents of shared directory: ***
[2025-04-17 13:36:47] total 412444
[2025-04-17 13:36:47] -rw-r--r--. 2 boinc boinc 223168548 Apr 17 09:41 ATLAS.root_0
[2025-04-17 13:36:47] -rw-r--r--. 2 boinc boinc    508890 Apr 17 09:41 input.tar.gz
[2025-04-17 13:36:47] -rw-r--r--. 2 boinc boinc     17569 Apr 17 09:41 start_atlas.sh
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc 197057554 Apr 17 13:34 HITS.pool.root.1
[2025-04-17 13:36:47] -rw-------. 1 boinc boinc   1576960 Apr 17 13:36 result.tar.gz
13:36:49 (2291371): run_atlas exited; CPU time 34570.898980
13:36:49 (2291371): called boinc_finish(0)

</stderr_txt>
]]>

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