Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:16:58 (3728015): wrapper (7.7.26015): starting
03:16:58 (3728015): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 03:16:58] Arguments: --nthreads 12
[2025-04-17 03:16:58] Threads: 12
[2025-04-17 03:16:58] Checking for CVMFS
[2025-04-17 03:16:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 03:16:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 03:16:58] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 03:16:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 03:16:58] 2.11.5.0 2879 19755 199776 144960 3 239 34452261 45568000 10980 130560 0 175802003 99.730 171854052 29285 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-17 03:16:58] CVMFS is ok
[2025-04-17 03:16:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 03:16:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 03:16:58] Further information can be found at the LHC@home message board.
[2025-04-17 03:16:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 03:16:58] Checking for apptainer binary...
[2025-04-17 03:16:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 03:16:58] Running /usr/bin/apptainer --version
[2025-04-17 03:16:58] apptainer version 1.3.5-1.el9
[2025-04-17 03:16:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 03:16:59] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0025.triumf.lcg
[2025-04-17 03:16:59] apptainer works
[2025-04-17 03:16:59] Set ATHENA_PROC_NUMBER=12
[2025-04-17 03:16:59] Set ATHENA_CORE_NUMBER=12
[2025-04-17 03:16:59] Starting ATLAS job with PandaID=6604896934
[2025-04-17 03:16:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 06:09:16]  *** The last 200 lines of the pilot log: ***
[2025-04-17 06:09:16] 2025-04-17 13:08:56,327 | INFO     | -- intersect: -105694009109.85332
[2025-04-17 06:09:16] 2025-04-17 13:08:56,327 | INFO     | intersect: -105694009109.85332
[2025-04-17 06:09:16] 2025-04-17 13:08:56,327 | INFO     | chi2: 5.559045850386626
[2025-04-17 06:09:16] 2025-04-17 13:08:56,328 | INFO     | sum of square deviations: 1367815845.8719487
[2025-04-17 06:09:16] 2025-04-17 13:08:56,328 | INFO     | sum of deviations: 88098638744.01833
[2025-04-17 06:09:16] 2025-04-17 13:08:56,328 | INFO     | mean x: 1744890022.8231707
[2025-04-17 06:09:16] 2025-04-17 13:08:56,328 | INFO     | mean y: 2631953.31097561
[2025-04-17 06:09:16] 2025-04-17 13:08:56,328 | INFO     | -- intersect: -112382698449.66164
[2025-04-17 06:09:16] 2025-04-17 13:08:56,328 | INFO     | intersect: -112382698449.66164
[2025-04-17 06:09:16] 2025-04-17 13:08:56,328 | INFO     | chi2: 5.558751400512414
[2025-04-17 06:09:16] 2025-04-17 13:08:56,329 | INFO     | current chi2=5.558751400512414 (change=0.00529677002378782 %)
[2025-04-17 06:09:16] 2025-04-17 13:08:56,329 | INFO     | right removable region: 163
[2025-04-17 06:09:16] 2025-04-17 13:08:56,329 | INFO     | sum of square deviations: 1367783515.8719487
[2025-04-17 06:09:16] 2025-04-17 13:08:56,329 | INFO     | sum of deviations: 45788564622.82319
[2025-04-17 06:09:16] 2025-04-17 13:08:56,329 | INFO     | mean x: 1744890327.8231707
[2025-04-17 06:09:16] 2025-04-17 13:08:56,329 | INFO     | mean y: 2687929.9939024393
[2025-04-17 06:09:16] 2025-04-17 13:08:56,329 | INFO     | -- intersect: -58410081786.95757
[2025-04-17 06:09:16] 2025-04-17 13:08:56,329 | INFO     | intersect: -58410081786.95757
[2025-04-17 06:09:16] 2025-04-17 13:08:56,330 | INFO     | chi2: 2.929890585534577
[2025-04-17 06:09:16] 2025-04-17 13:08:56,330 | INFO     | current chi2=2.929890585534577 (change=47.2950814872159 %)
[2025-04-17 06:09:16] 2025-04-17 13:08:56,330 | INFO     | sum of square deviations: 1246444145.3333323
[2025-04-17 06:09:16] 2025-04-17 13:08:56,330 | INFO     | sum of deviations: 5948913034.999994
[2025-04-17 06:09:16] 2025-04-17 13:08:56,330 | INFO     | mean x: 1744890480.3333333
[2025-04-17 06:09:16] 2025-04-17 13:08:56,330 | INFO     | mean y: 2738030.4716981133
[2025-04-17 06:09:16] 2025-04-17 13:08:56,330 | INFO     | -- intersect: -8325113451.6550255
[2025-04-17 06:09:16] 2025-04-17 13:08:56,330 | INFO     | intersect: -8325113451.6550255
[2025-04-17 06:09:16] 2025-04-17 13:08:56,331 | INFO     | chi2: 1.0004912619082058
[2025-04-17 06:09:16] 2025-04-17 13:08:56,331 | INFO     | current chi2=1.0004912619082058 (change=65.85226537646764 %)
[2025-04-17 06:09:16] 2025-04-17 13:08:56,331 | INFO     | sum of square deviations: 1132500262.2597442
[2025-04-17 06:09:16] 2025-04-17 13:08:56,331 | INFO     | sum of deviations: -18482825334.14286
[2025-04-17 06:09:16] 2025-04-17 13:08:56,331 | INFO     | mean x: 1744890632.8441558
[2025-04-17 06:09:16] 2025-04-17 13:08:56,331 | INFO     | mean y: 2770434.285714286
[2025-04-17 06:09:16] 2025-04-17 13:08:56,331 | INFO     | -- intersect: 28480034297.9507
[2025-04-17 06:09:16] 2025-04-17 13:08:56,331 | INFO     | intersect: 28480034297.9507
[2025-04-17 06:09:16] 2025-04-17 13:08:56,332 | INFO     | chi2: 0.04737451690139076
[2025-04-17 06:09:16] 2025-04-17 13:08:56,332 | INFO     | current chi2=0.04737451690139076 (change=95.2648744966513 %)
[2025-04-17 06:09:16] 2025-04-17 13:08:56,332 | INFO     | sum of square deviations: 1025757122.8859056
[2025-04-17 06:09:16] 2025-04-17 13:08:56,332 | INFO     | sum of deviations: -18670232918.234898
[2025-04-17 06:09:16] 2025-04-17 13:08:56,332 | INFO     | mean x: 1744890785.328859
[2025-04-17 06:09:16] 2025-04-17 13:08:56,332 | INFO     | mean y: 2770680.147651007
[2025-04-17 06:09:16] 2025-04-17 13:08:56,332 | INFO     | -- intersect: 31762255115.719234
[2025-04-17 06:09:16] 2025-04-17 13:08:56,332 | INFO     | intersect: 31762255115.719234
[2025-04-17 06:09:16] 2025-04-17 13:08:56,333 | INFO     | chi2: 0.041611855506790876
[2025-04-17 06:09:16] 2025-04-17 13:08:56,333 | INFO     | current chi2=0.041611855506790876 (change=12.164053106007948 %)
[2025-04-17 06:09:16] 2025-04-17 13:08:56,333 | INFO     | left removable region: 40
[2025-04-17 06:09:16] 2025-04-17 13:08:56,333 | INFO     | sum of square deviations: 577051366.2601641
[2025-04-17 06:09:16] 2025-04-17 13:08:56,333 | INFO     | sum of deviations: -11905825527.804886
[2025-04-17 06:09:16] 2025-04-17 13:08:56,333 | INFO     | mean x: 1744891212.3577235
[2025-04-17 06:09:16] 2025-04-17 13:08:56,333 | INFO     | mean y: 2761266.2682926827
[2025-04-17 06:09:16] 2025-04-17 13:08:56,333 | INFO     | -- intersect: 36003664398.979805
[2025-04-17 06:09:16] 2025-04-17 13:08:56,333 | INFO     | intersect: 36003664398.979805
[2025-04-17 06:09:16] 2025-04-17 13:08:56,333 | INFO     | chi2: 0.038762938670126805
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | -- intersect: 36003664398.979805
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | current memory leak: -20.63 B/s (using 123 data points, chi2=0.04)
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | ..............................
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | . Timing measurements:
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | . get job = 0 s
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | . initial setup = 2 s
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | . payload setup = 4 s
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | . stage-in = 0 s
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | . payload execution = 10280 s
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | . stage-out = 0 s
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | . log creation = 0 s
[2025-04-17 06:09:16] 2025-04-17 13:08:56,334 | INFO     | ..............................
[2025-04-17 06:09:16] 2025-04-17 13:08:56,389 | INFO     | 
[2025-04-17 06:09:16] 2025-04-17 13:08:56,389 | INFO     | job summary report
[2025-04-17 06:09:16] 2025-04-17 13:08:56,389 | INFO     | --------------------------------------------------
[2025-04-17 06:09:16] 2025-04-17 13:08:56,389 | INFO     | PanDA job id: 6604896934
[2025-04-17 06:09:16] 2025-04-17 13:08:56,389 | INFO     | task id: 44075483
[2025-04-17 06:09:16] 2025-04-17 13:08:56,389 | INFO     | errors: (none)
[2025-04-17 06:09:16] 2025-04-17 13:08:56,389 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 06:09:16] 2025-04-17 13:08:56,389 | INFO     | pilot state: finished 
[2025-04-17 06:09:16] 2025-04-17 13:08:56,389 | INFO     | transexitcode: 0
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | exeerrorcode: 0
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | exeerrordiag: 
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | exitcode: 0
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | exitmsg: OK
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | cpuconsumptiontime: 27724 s
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | nevents: 400
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | neventsw: 0
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | pid: 3750196
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | pgrp: 3750196
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | corecount: 12
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | event service: False
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | sizes: {0: 2426821, 3: 2427027, 11: 2427055, 10288: 2455602, 10289: 2464592, 10290: 2464592, 10293: 2464890}
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | --------------------------------------------------
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | 
[2025-04-17 06:09:16] 2025-04-17 13:08:56,390 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-17 06:09:16] 2025-04-17 13:08:56,403 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,403 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,403 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,403 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | job 6604896934 has completed (purged errors)
[2025-04-17 06:09:16] 2025-04-17 13:08:56,404 | INFO     | overall cleanup function is called
[2025-04-17 06:09:16] 2025-04-17 13:08:57,418 | INFO     | --- collectZombieJob: --- 10, [3750196]
[2025-04-17 06:09:16] 2025-04-17 13:08:57,418 | INFO     | zombie collector waiting for pid 3750196
[2025-04-17 06:09:16] 2025-04-17 13:08:57,418 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 06:09:16] 2025-04-17 13:08:57,418 | INFO     | collected zombie processes
[2025-04-17 06:09:16] 2025-04-17 13:08:57,418 | INFO     | will attempt to kill all subprocesses of pid=3750196
[2025-04-17 06:09:16] 2025-04-17 13:08:58,002 | INFO     | PID=3735277 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-17 06:09:16] 2025-04-17 13:08:58,002 | INFO     | .. there are 42 such processes running
[2025-04-17 06:09:16] 2025-04-17 13:08:58,004 | INFO     | process IDs to be killed: [3750196] (in reverse order)
[2025-04-17 06:09:16] 2025-04-17 13:08:58,082 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 06:09:16] 2025-04-17 13:08:58,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 06:09:16] 2025-04-17 13:08:58,092 | INFO     | did not find any defunct processes belonging to 3750196
[2025-04-17 06:09:16] 2025-04-17 13:08:58,101 | INFO     | did not find any defunct processes belonging to 3750196
[2025-04-17 06:09:16] 2025-04-17 13:08:58,101 | INFO     | ready for new job
[2025-04-17 06:09:16] 2025-04-17 13:08:58,101 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 06:09:16] 2025-04-17 13:08:58,102 | INFO     | **************************************
[2025-04-17 06:09:16] 2025-04-17 13:08:58,102 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 06:09:16] 2025-04-17 13:08:58,102 | INFO     | **************************************
[2025-04-17 06:09:16] 2025-04-17 13:08:58,102 | INFO     | 
[2025-04-17 06:09:16] 2025-04-17 13:08:58,104 | INFO     | architecture information:
[2025-04-17 06:09:16] 2025-04-17 13:08:58,104 | INFO     | executing command: cat /etc/os-release
[2025-04-17 06:09:16] 2025-04-17 13:08:58,114 | INFO     | cat /etc/os-release:
[2025-04-17 06:09:16] NAME="CentOS Linux"
[2025-04-17 06:09:16] VERSION="7 (Core)"
[2025-04-17 06:09:16] ID="centos"
[2025-04-17 06:09:16] ID_LIKE="rhel fedora"
[2025-04-17 06:09:16] VERSION_ID="7"
[2025-04-17 06:09:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 06:09:16] ANSI_COLOR="0;31"
[2025-04-17 06:09:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 06:09:16] HOME_URL="https://www.centos.org/"
[2025-04-17 06:09:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 06:09:16] 
[2025-04-17 06:09:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 06:09:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 06:09:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 06:09:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 06:09:16] 
[2025-04-17 06:09:16] 2025-04-17 13:08:58,115 | INFO     | **************************************
[2025-04-17 06:09:16] 2025-04-17 13:08:58,618 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-17 06:09:16] 2025-04-17 13:08:58,628 | INFO     | sufficient remaining disk space (2189380550656 B)
[2025-04-17 06:09:16] 2025-04-17 13:08:58,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 06:09:16] 2025-04-17 13:08:58,628 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 06:09:16] 2025-04-17 13:08:58,628 | INFO     | update_server=False
[2025-04-17 06:09:16] 2025-04-17 13:08:58,628 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 06:09:16] 2025-04-17 13:08:58,628 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 06:09:16] 2025-04-17 13:08:58,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 06:09:16] 2025-04-17 13:08:58,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 06:09:16] 2025-04-17 13:08:58,629 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 06:09:16] 2025-04-17 13:08:58,629 | INFO     | aborting loop
[2025-04-17 06:09:16] 2025-04-17 13:08:58,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 06:09:16] 2025-04-17 13:08:58,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 06:09:16] 2025-04-17 13:08:59,090 | INFO     | all data control threads have been joined
[2025-04-17 06:09:16] 2025-04-17 13:08:59,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 06:09:16] 2025-04-17 13:08:59,146 | INFO     | all payload control threads have been joined
[2025-04-17 06:09:16] 2025-04-17 13:08:59,633 | INFO     | [job] retrieve thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:08:59,634 | INFO     | [job] job monitor thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:08:59,872 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:08:59,944 | INFO     | all job control threads have been joined
[2025-04-17 06:09:16] 2025-04-17 13:09:00,095 | INFO     | [data] control thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:00,152 | INFO     | [payload] control thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:00,325 | INFO     | [data] copytool_in thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:00,409 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:00,636 | INFO     | [data] copytool_out thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:00,700 | INFO     | [payload] validate_post thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:00,949 | INFO     | [job] control thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:00,951 | INFO     | [payload] failed_post thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:00,952 | INFO     | [job] validate thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:01,101 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:01,401 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 06:09:16] 2025-04-17 13:09:02,406 | INFO     | [job] queue monitor thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:03,104 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:09,615 | INFO     | job.realtimelogging is not enabled
[2025-04-17 06:09:16] 2025-04-17 13:09:10,620 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 06:09:16] 2025-04-17 13:09:10,835 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954546673472)>', '<ExcThread(monitor, started 139953765861120)>']
[2025-04-17 06:09:16] 2025-04-17 13:09:11,706 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 06:09:16] 2025-04-17 13:09:11,706 | INFO     | [monitor] control thread has ended
[2025-04-17 06:09:16] 2025-04-17 13:09:15,860 | INFO     | all workflow threads have been joined
[2025-04-17 06:09:16] 2025-04-17 13:09:15,860 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 06:09:16] 2025-04-17 13:09:15,860 | INFO     | traces error code: 0
[2025-04-17 06:09:16] 2025-04-17 13:09:15,861 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 06:09:16] 2025-04-17 13:09:15,961 [wrapper] ==== pilot stdout END ====
[2025-04-17 06:09:16] 2025-04-17 13:09:15,964 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 06:09:16] 2025-04-17 13:09:15,966 [wrapper] pilotpid: 3735277
[2025-04-17 06:09:16] 2025-04-17 13:09:15,968 [wrapper] Pilot exit status: 0
[2025-04-17 06:09:16] 2025-04-17 13:09:15,976 [wrapper] pandaids: 6604896934
[2025-04-17 06:09:16] 2025-04-17 13:09:16,031 [wrapper] cleanup supervisor_pilot  455223 3735278
[2025-04-17 06:09:16] 2025-04-17 13:09:16,034 [wrapper] Test setup, not cleaning
[2025-04-17 06:09:16] 2025-04-17 13:09:16,036 [wrapper] apfmon messages muted
[2025-04-17 06:09:16] 2025-04-17 13:09:16,038 [wrapper] ==== wrapper stdout END ====
[2025-04-17 06:09:16] 2025-04-17 13:09:16,040 [wrapper] ==== wrapper stderr END ====
[2025-04-17 06:09:16]  *** Error codes and diagnostics ***
[2025-04-17 06:09:16]     "exeErrorCode": 0,
[2025-04-17 06:09:16]     "exeErrorDiag": "",
[2025-04-17 06:09:16]     "pilotErrorCode": 0,
[2025-04-17 06:09:16]     "pilotErrorDiag": "",
[2025-04-17 06:09:16]  *** Listing of results directory ***
[2025-04-17 06:09:16] total 418500
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc    495897 Apr 16 19:50 pilot3.tar.gz
[2025-04-17 06:09:16] -rwx------. 1 boinc boinc     37140 Apr 16 19:52 runpilot2-wrapper.sh
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc      5111 Apr 16 19:52 queuedata.json
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc       100 Apr 17 03:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 06:09:16] -rwxr-xr-x. 1 boinc boinc      7986 Apr 17 03:16 run_atlas
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc       105 Apr 17 03:16 job.xml
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc      6601 Apr 17 03:16 init_data.xml
[2025-04-17 06:09:16] -rw-r--r--. 2 boinc boinc 223178270 Apr 17 03:16 EVNT.44075481._001926.pool.root.1
[2025-04-17 06:09:16] -rw-r--r--. 2 boinc boinc    508883 Apr 17 03:16 input.tar.gz
[2025-04-17 06:09:16] -rw-r--r--. 2 boinc boinc     17569 Apr 17 03:16 start_atlas.sh
[2025-04-17 06:09:16] drwxrwx--x. 2 boinc boinc      4096 Apr 17 03:16 shared
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc         0 Apr 17 03:16 boinc_lockfile
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc      2579 Apr 17 03:16 pandaJob.out
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc       424 Apr 17 03:16 setup.sh.local
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc    990239 Apr 17 03:17 agis_schedconf.cvmfs.json
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc   1618536 Apr 17 03:17 agis_ddmendpoints.agis.ALL.json
[2025-04-17 06:09:16] drwx------. 4 boinc boinc      4096 Apr 17 03:17 pilot3
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc 198924061 Apr 17 06:08 HITS.44075483._049346.pool.root.1
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc       531 Apr 17 06:08 boinc_task_state.xml
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc        95 Apr 17 06:08 pilot_heartbeat.json
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc      1042 Apr 17 06:08 memory_monitor_summary.json
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc    427901 Apr 17 06:08 log.44075483._049346.job.log.tgz.1
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc      7733 Apr 17 06:08 heartbeat.json
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc      8192 Apr 17 06:09 boinc_mmap_file
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc        28 Apr 17 06:09 wrapper_checkpoint.txt
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc      4547 Apr 17 06:09 pilotlog.txt
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc    859070 Apr 17 06:09 log.44075483._049346.job.log.1
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc       357 Apr 17 06:09 output.list
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc       620 Apr 17 06:09 runtime_log
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc   1310720 Apr 17 06:09 result.tar.gz
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc       661 Apr 17 06:09 wITKDmtXUP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmXqbLDmqq7svn.diag
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc     11145 Apr 17 06:09 runtime_log.err
[2025-04-17 06:09:16] -rw-r--r--. 1 boinc boinc     21153 Apr 17 06:09 stderr.txt
[2025-04-17 06:09:16] HITS file was successfully produced:
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc 198924061 Apr 17 06:08 shared/HITS.pool.root.1
[2025-04-17 06:09:16]  *** Contents of shared directory: ***
[2025-04-17 06:09:16] total 414020
[2025-04-17 06:09:16] -rw-r--r--. 2 boinc boinc 223178270 Apr 17 03:16 ATLAS.root_0
[2025-04-17 06:09:16] -rw-r--r--. 2 boinc boinc    508883 Apr 17 03:16 input.tar.gz
[2025-04-17 06:09:16] -rw-r--r--. 2 boinc boinc     17569 Apr 17 03:16 start_atlas.sh
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc 198924061 Apr 17 06:08 HITS.pool.root.1
[2025-04-17 06:09:16] -rw-------. 1 boinc boinc   1310720 Apr 17 06:09 result.tar.gz
06:09:17 (3728015): run_atlas exited; CPU time 27924.275839
06:09:17 (3728015): called boinc_finish(0)

</stderr_txt>
]]>

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