Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:41:15 (16563): wrapper (7.7.26015): starting
00:41:15 (16563): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 00:41:15] Arguments: --nthreads 10
[2025-04-17 00:41:15] Threads: 10
[2025-04-17 00:41:15] Checking for CVMFS
[2025-04-17 00:41:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 00:41:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 00:41:16] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 00:41:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 00:41:17] 2.11.2.0 30725 34100 264600 144949 0 327 15927599 18432000 16292 130560 0 132287586 98.881 336390348 37907 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-17 00:41:17] CVMFS is ok
[2025-04-17 00:41:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 00:41:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 00:41:17] Further information can be found at the LHC@home message board.
[2025-04-17 00:41:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 00:41:17] Checking for apptainer binary...
[2025-04-17 00:41:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 00:41:17] Running /usr/bin/apptainer --version
[2025-04-17 00:41:17] apptainer version 1.3.2-1.el7
[2025-04-17 00:41:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 00:41:22] c-210-28.aglt2.org
[2025-04-17 00:41:22] apptainer works
[2025-04-17 00:41:22] Set ATHENA_PROC_NUMBER=10
[2025-04-17 00:41:22] Set ATHENA_CORE_NUMBER=10
[2025-04-17 00:41:22] Starting ATLAS job with PandaID=6604828743
[2025-04-17 00:41:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 11:44:42]  *** The last 200 lines of the pilot log: ***
[2025-04-17 11:44:42] 2025-04-17 15:44:23,845 | INFO     | intersect: -12224566738.294523
[2025-04-17 11:44:42] 2025-04-17 15:44:23,846 | INFO     | chi2: 7.611126202009863
[2025-04-17 11:44:42] 2025-04-17 15:44:23,847 | INFO     | sum of square deviations: 82818140707.8681
[2025-04-17 11:44:42] 2025-04-17 15:44:23,858 | INFO     | sum of deviations: 633524590097.3844
[2025-04-17 11:44:42] 2025-04-17 15:44:23,858 | INFO     | mean x: 1744884664.1723602
[2025-04-17 11:44:42] 2025-04-17 15:44:23,858 | INFO     | mean y: 2529687.1226708074
[2025-04-17 11:44:42] 2025-04-17 15:44:23,858 | INFO     | -- intersect: -13345117726.70035
[2025-04-17 11:44:42] 2025-04-17 15:44:23,858 | INFO     | intersect: -13345117726.70035
[2025-04-17 11:44:42] 2025-04-17 15:44:23,859 | INFO     | chi2: 6.8391156884085795
[2025-04-17 11:44:42] 2025-04-17 15:44:23,860 | INFO     | current chi2=6.8391156884085795 (change=10.143183716982897 %)
[2025-04-17 11:44:42] 2025-04-17 15:44:23,860 | INFO     | right removable region: 643
[2025-04-17 11:44:42] 2025-04-17 15:44:23,861 | INFO     | sum of square deviations: 82817876577.86812
[2025-04-17 11:44:42] 2025-04-17 15:44:23,872 | INFO     | sum of deviations: 396507205622.05084
[2025-04-17 11:44:42] 2025-04-17 15:44:23,872 | INFO     | mean x: 1744884969.1723602
[2025-04-17 11:44:42] 2025-04-17 15:44:23,872 | INFO     | mean y: 2542083.4409937887
[2025-04-17 11:44:42] 2025-04-17 15:44:23,872 | INFO     | -- intersect: -8351444903.993314
[2025-04-17 11:44:42] 2025-04-17 15:44:23,872 | INFO     | intersect: -8351444903.993314
[2025-04-17 11:44:42] 2025-04-17 15:44:23,873 | INFO     | chi2: 4.284910402406732
[2025-04-17 11:44:42] 2025-04-17 15:44:23,873 | INFO     | current chi2=4.284910402406732 (change=43.70201874625046 %)
[2025-04-17 11:44:42] 2025-04-17 15:44:23,874 | INFO     | sum of square deviations: 80903643505.59007
[2025-04-17 11:44:42] 2025-04-17 15:44:23,884 | INFO     | sum of deviations: 247387170994.02655
[2025-04-17 11:44:42] 2025-04-17 15:44:23,885 | INFO     | mean x: 1744885121.6776214
[2025-04-17 11:44:42] 2025-04-17 15:44:23,885 | INFO     | mean y: 2553962.0438184664
[2025-04-17 11:44:42] 2025-04-17 15:44:23,885 | INFO     | -- intersect: -5332955976.16519
[2025-04-17 11:44:42] 2025-04-17 15:44:23,885 | INFO     | intersect: -5332955976.16519
[2025-04-17 11:44:42] 2025-04-17 15:44:23,886 | INFO     | chi2: 2.4965844826853933
[2025-04-17 11:44:42] 2025-04-17 15:44:23,886 | INFO     | current chi2=2.4965844826853933 (change=41.73543322438851 %)
[2025-04-17 11:44:42] 2025-04-17 15:44:23,887 | INFO     | sum of square deviations: 79019131920.77637
[2025-04-17 11:44:42] 2025-04-17 15:44:23,897 | INFO     | sum of deviations: 118503846612.6466
[2025-04-17 11:44:42] 2025-04-17 15:44:23,898 | INFO     | mean x: 1744885274.1829653
[2025-04-17 11:44:42] 2025-04-17 15:44:23,898 | INFO     | mean y: 2564384.9858044162
[2025-04-17 11:44:42] 2025-04-17 15:44:23,898 | INFO     | -- intersect: -2614214765.3566046
[2025-04-17 11:44:42] 2025-04-17 15:44:23,898 | INFO     | intersect: -2614214765.3566046
[2025-04-17 11:44:42] 2025-04-17 15:44:23,899 | INFO     | chi2: 1.1213984382551816
[2025-04-17 11:44:42] 2025-04-17 15:44:23,899 | INFO     | current chi2=1.1213984382551816 (change=55.08269613816652 %)
[2025-04-17 11:44:42] 2025-04-17 15:44:23,900 | INFO     | sum of square deviations: 77164109260.92526
[2025-04-17 11:44:42] 2025-04-17 15:44:23,911 | INFO     | sum of deviations: 64027223172.37994
[2025-04-17 11:44:42] 2025-04-17 15:44:23,911 | INFO     | mean x: 1744885426.6883943
[2025-04-17 11:44:42] 2025-04-17 15:44:23,911 | INFO     | mean y: 2568858.4356120825
[2025-04-17 11:44:42] 2025-04-17 15:44:23,911 | INFO     | -- intersect: -1445256687.5968957
[2025-04-17 11:44:42] 2025-04-17 15:44:23,911 | INFO     | intersect: -1445256687.5968957
[2025-04-17 11:44:42] 2025-04-17 15:44:23,912 | INFO     | chi2: 0.8796588885563171
[2025-04-17 11:44:42] 2025-04-17 15:44:23,913 | INFO     | current chi2=0.8796588885563171 (change=21.55697221007321 %)
[2025-04-17 11:44:42] 2025-04-17 15:44:23,913 | INFO     | left removable region: 40
[2025-04-17 11:44:42] 2025-04-17 15:44:23,914 | INFO     | sum of square deviations: 67985087019.462685
[2025-04-17 11:44:42] 2025-04-17 15:44:23,923 | INFO     | sum of deviations: 66869642027.0
[2025-04-17 11:44:42] 2025-04-17 15:44:23,923 | INFO     | mean x: 1744885853.6965175
[2025-04-17 11:44:42] 2025-04-17 15:44:23,924 | INFO     | mean y: 2575740.6666666665
[2025-04-17 11:44:42] 2025-04-17 15:44:23,924 | INFO     | -- intersect: -1713681419.9847486
[2025-04-17 11:44:42] 2025-04-17 15:44:23,924 | INFO     | intersect: -1713681419.9847486
[2025-04-17 11:44:42] 2025-04-17 15:44:23,925 | INFO     | chi2: 0.008101963465250115
[2025-04-17 11:44:42] 2025-04-17 15:44:23,925 | INFO     | -- intersect: -1713681419.9847486
[2025-04-17 11:44:42] 2025-04-17 15:44:23,925 | INFO     | current memory leak: 0.98 B/s (using 603 data points, chi2=0.01)
[2025-04-17 11:44:42] 2025-04-17 15:44:23,926 | INFO     | ..............................
[2025-04-17 11:44:42] 2025-04-17 15:44:23,926 | INFO     | . Timing measurements:
[2025-04-17 11:44:42] 2025-04-17 15:44:23,927 | INFO     | . get job = 0 s
[2025-04-17 11:44:42] 2025-04-17 15:44:23,927 | INFO     | . initial setup = 5 s
[2025-04-17 11:44:42] 2025-04-17 15:44:23,927 | INFO     | . payload setup = 31 s
[2025-04-17 11:44:42] 2025-04-17 15:44:23,927 | INFO     | . stage-in = 0 s
[2025-04-17 11:44:42] 2025-04-17 15:44:23,927 | INFO     | . payload execution = 39607 s
[2025-04-17 11:44:42] 2025-04-17 15:44:23,927 | INFO     | . stage-out = 5 s
[2025-04-17 11:44:42] 2025-04-17 15:44:23,927 | INFO     | . log creation = 1 s
[2025-04-17 11:44:42] 2025-04-17 15:44:23,927 | INFO     | ..............................
[2025-04-17 11:44:42] 2025-04-17 15:44:24,043 | INFO     | 
[2025-04-17 11:44:42] 2025-04-17 15:44:24,043 | INFO     | job summary report
[2025-04-17 11:44:42] 2025-04-17 15:44:24,043 | INFO     | --------------------------------------------------
[2025-04-17 11:44:42] 2025-04-17 15:44:24,043 | INFO     | PanDA job id: 6604828743
[2025-04-17 11:44:42] 2025-04-17 15:44:24,043 | INFO     | task id: 44075483
[2025-04-17 11:44:42] 2025-04-17 15:44:24,043 | INFO     | errors: (none)
[2025-04-17 11:44:42] 2025-04-17 15:44:24,043 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 11:44:42] 2025-04-17 15:44:24,043 | INFO     | pilot state: finished 
[2025-04-17 11:44:42] 2025-04-17 15:44:24,044 | INFO     | transexitcode: 0
[2025-04-17 11:44:42] 2025-04-17 15:44:24,044 | INFO     | exeerrorcode: 0
[2025-04-17 11:44:42] 2025-04-17 15:44:24,044 | INFO     | exeerrordiag: 
[2025-04-17 11:44:42] 2025-04-17 15:44:24,044 | INFO     | exitcode: 0
[2025-04-17 11:44:42] 2025-04-17 15:44:24,044 | INFO     | exitmsg: OK
[2025-04-17 11:44:42] 2025-04-17 15:44:24,044 | INFO     | cpuconsumptiontime: 55238 s
[2025-04-17 11:44:42] 2025-04-17 15:44:24,044 | INFO     | nevents: 400
[2025-04-17 11:44:42] 2025-04-17 15:44:24,044 | INFO     | neventsw: 0
[2025-04-17 11:44:42] 2025-04-17 15:44:24,044 | INFO     | pid: 5588
[2025-04-17 11:44:42] 2025-04-17 15:44:24,045 | INFO     | pgrp: 5588
[2025-04-17 11:44:42] 2025-04-17 15:44:24,045 | INFO     | corecount: 10
[2025-04-17 11:44:42] 2025-04-17 15:44:24,045 | INFO     | event service: False
[2025-04-17 11:44:42] 2025-04-17 15:44:24,045 | INFO     | sizes: {0: 2417195, 1: 2417394, 12: 2417394, 17: 2417628, 23: 2417656, 39643: 2458788, 39650: 2477243, 39687: 2477357}
[2025-04-17 11:44:42] 2025-04-17 15:44:24,045 | INFO     | --------------------------------------------------
[2025-04-17 11:44:42] 2025-04-17 15:44:24,045 | INFO     | 
[2025-04-17 11:44:42] 2025-04-17 15:44:24,045 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-17 11:44:42] 2025-04-17 15:44:24,121 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,121 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,121 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,121 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,121 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,122 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,122 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,122 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,122 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,122 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,122 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,122 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,122 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,123 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,123 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,123 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,123 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 11:44:42] 2025-04-17 15:44:24,123 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,123 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 11:44:42] 2025-04-17 15:44:24,124 | INFO     | job 6604828743 has completed (purged errors)
[2025-04-17 11:44:42] 2025-04-17 15:44:24,124 | INFO     | overall cleanup function is called
[2025-04-17 11:44:42] 2025-04-17 15:44:25,189 | INFO     | --- collectZombieJob: --- 10, [5588]
[2025-04-17 11:44:42] 2025-04-17 15:44:25,189 | INFO     | zombie collector waiting for pid 5588
[2025-04-17 11:44:42] 2025-04-17 15:44:25,189 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 11:44:42] 2025-04-17 15:44:25,189 | INFO     | collected zombie processes
[2025-04-17 11:44:42] 2025-04-17 15:44:25,189 | INFO     | will attempt to kill all subprocesses of pid=5588
[2025-04-17 11:44:42] 2025-04-17 15:44:26,777 | INFO     | process IDs to be killed: [5588] (in reverse order)
[2025-04-17 11:44:42] 2025-04-17 15:44:26,796 | INFO     | PID=27845 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-17 11:44:42] 2025-04-17 15:44:26,797 | INFO     | .. there are 37 such processes running
[2025-04-17 11:44:42] 2025-04-17 15:44:26,937 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 11:44:42] 2025-04-17 15:44:26,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 11:44:42] 2025-04-17 15:44:26,949 | INFO     | did not find any defunct processes belonging to 5588
[2025-04-17 11:44:42] 2025-04-17 15:44:26,961 | INFO     | did not find any defunct processes belonging to 5588
[2025-04-17 11:44:42] 2025-04-17 15:44:26,961 | INFO     | ready for new job
[2025-04-17 11:44:42] 2025-04-17 15:44:26,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 11:44:42] 2025-04-17 15:44:26,964 | INFO     | **************************************
[2025-04-17 11:44:42] 2025-04-17 15:44:26,965 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 11:44:42] 2025-04-17 15:44:26,965 | INFO     | **************************************
[2025-04-17 11:44:42] 2025-04-17 15:44:26,965 | INFO     | 
[2025-04-17 11:44:42] 2025-04-17 15:44:26,967 | INFO     | architecture information:
[2025-04-17 11:44:42] 2025-04-17 15:44:26,967 | INFO     | executing command: cat /etc/os-release
[2025-04-17 11:44:42] 2025-04-17 15:44:27,028 | INFO     | cat /etc/os-release:
[2025-04-17 11:44:42] NAME="CentOS Linux"
[2025-04-17 11:44:42] VERSION="7 (Core)"
[2025-04-17 11:44:42] ID="centos"
[2025-04-17 11:44:42] ID_LIKE="rhel fedora"
[2025-04-17 11:44:42] VERSION_ID="7"
[2025-04-17 11:44:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 11:44:42] ANSI_COLOR="0;31"
[2025-04-17 11:44:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 11:44:42] HOME_URL="https://www.centos.org/"
[2025-04-17 11:44:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 11:44:42] 
[2025-04-17 11:44:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 11:44:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 11:44:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 11:44:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 11:44:42] 
[2025-04-17 11:44:42] 2025-04-17 15:44:27,028 | INFO     | **************************************
[2025-04-17 11:44:42] 2025-04-17 15:44:27,529 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-17 11:44:42] 2025-04-17 15:44:27,551 | INFO     | sufficient remaining disk space (56943968256 B)
[2025-04-17 11:44:42] 2025-04-17 15:44:27,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 11:44:42] 2025-04-17 15:44:27,552 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 11:44:42] 2025-04-17 15:44:27,552 | INFO     | update_server=False
[2025-04-17 11:44:42] 2025-04-17 15:44:27,552 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 11:44:42] 2025-04-17 15:44:27,553 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 11:44:42] 2025-04-17 15:44:27,553 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 11:44:42] 2025-04-17 15:44:27,553 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 11:44:42] 2025-04-17 15:44:27,553 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 11:44:42] 2025-04-17 15:44:27,643 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-17 11:44:42] 2025-04-17 15:44:27,644 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-17 11:44:42] 2025-04-17 15:44:27,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 11:44:42] 2025-04-17 15:44:27,649 | INFO     | will abort loop
[2025-04-17 11:44:42] 2025-04-17 15:44:27,678 | INFO     | all data control threads have been joined
[2025-04-17 11:44:42] 2025-04-17 15:44:27,881 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 11:44:42] 2025-04-17 15:44:28,559 | INFO     | [job] retrieve thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:28,564 | INFO     | all payload control threads have been joined
[2025-04-17 11:44:42] 2025-04-17 15:44:28,572 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:28,586 | INFO     | [payload] validate_post thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:28,655 | INFO     | [job] job monitor thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:28,685 | INFO     | [data] control thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:28,888 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:29,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 11:44:42] 2025-04-17 15:44:29,123 | INFO     | all job control threads have been joined
[2025-04-17 11:44:42] 2025-04-17 15:44:29,179 | INFO     | [payload] failed_post thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:29,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:29,571 | INFO     | [payload] control thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:29,828 | INFO     | [data] copytool_in thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:29,858 | INFO     | [job] validate thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:29,858 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:29,888 | INFO     | [data] copytool_out thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:29,953 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 11:44:42] 2025-04-17 15:44:30,077 | INFO     | [job] queue monitor thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:30,124 | INFO     | [job] control thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:33,962 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 11:44:42] 2025-04-17 15:44:35,449 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140041061947200)>', '<ExcThread(monitor, started 140040487298816)>']
[2025-04-17 11:44:42] 2025-04-17 15:44:35,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 11:44:42] 2025-04-17 15:44:35,606 | INFO     | [monitor] control thread has ended
[2025-04-17 11:44:42] 2025-04-17 15:44:40,477 | INFO     | all workflow threads have been joined
[2025-04-17 11:44:42] 2025-04-17 15:44:40,478 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 11:44:42] 2025-04-17 15:44:40,478 | INFO     | traces error code: 0
[2025-04-17 11:44:42] 2025-04-17 15:44:40,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 11:44:42] 2025-04-17 15:44:41,354 [wrapper] ==== pilot stdout END ====
[2025-04-17 11:44:42] 2025-04-17 15:44:41,392 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 11:44:42] 2025-04-17 15:44:41,439 [wrapper] pilotpid: 27845
[2025-04-17 11:44:42] 2025-04-17 15:44:41,471 [wrapper] Pilot exit status: 0
[2025-04-17 11:44:42] 2025-04-17 15:44:41,663 [wrapper] pandaids: 6604828743
[2025-04-17 11:44:42] 2025-04-17 15:44:41,800 [wrapper] cleanup supervisor_pilot 25676 27846
[2025-04-17 11:44:42] 2025-04-17 15:44:41,805 [wrapper] Test setup, not cleaning
[2025-04-17 11:44:42] 2025-04-17 15:44:41,810 [wrapper] apfmon messages muted
[2025-04-17 11:44:42] 2025-04-17 15:44:41,825 [wrapper] ==== wrapper stdout END ====
[2025-04-17 11:44:42] 2025-04-17 15:44:41,830 [wrapper] ==== wrapper stderr END ====
[2025-04-17 11:44:42]  *** Error codes and diagnostics ***
[2025-04-17 11:44:42]     "exeErrorCode": 0,
[2025-04-17 11:44:42]     "exeErrorDiag": "",
[2025-04-17 11:44:42]     "pilotErrorCode": 0,
[2025-04-17 11:44:42]     "pilotErrorDiag": "",
[2025-04-17 11:44:42]  *** Listing of results directory ***
[2025-04-17 11:44:42] total 419720
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 21:35 pilot3.tar.gz
[2025-04-17 11:44:42] -rwx------ 1 boincer umatlas     37140 Apr 16 21:41 runpilot2-wrapper.sh
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 21:41 queuedata.json
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas       100 Apr 17 00:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 11:44:42] -rwxr-xr-x 1 boincer umatlas      7986 Apr 17 00:39 run_atlas
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas       105 Apr 17 00:39 job.xml
[2025-04-17 11:44:42] -rw-r--r-- 2 boincer umatlas 224021508 Apr 17 00:41 EVNT.44075481._001899.pool.root.1
[2025-04-17 11:44:42] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 00:41 start_atlas.sh
[2025-04-17 11:44:42] drwxrwx--x 2 boincer umatlas      4096 Apr 17 00:41 shared
[2025-04-17 11:44:42] -rw-r--r-- 2 boincer umatlas    508883 Apr 17 00:41 input.tar.gz
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas         0 Apr 17 00:41 boinc_lockfile
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas      2579 Apr 17 00:41 pandaJob.out
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas       467 Apr 17 00:41 setup.sh.local
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas    986368 Apr 17 00:42 agis_schedconf.cvmfs.json
[2025-04-17 11:44:42] drwx------ 4 boincer umatlas      4096 Apr 17 00:42 pilot3
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas      6229 Apr 17 11:40 init_data.xml
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas 194941780 Apr 17 11:41 HITS.44075483._048603.pool.root.1
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas       531 Apr 17 11:42 boinc_task_state.xml
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas      1057 Apr 17 11:43 memory_monitor_summary.json
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas   1618536 Apr 17 11:43 agis_ddmendpoints.agis.ALL.json
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas    616846 Apr 17 11:43 log.44075483._048603.job.log.tgz.1
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas        95 Apr 17 11:44 pilot_heartbeat.json
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas      7751 Apr 17 11:44 heartbeat.json
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 11:44 boinc_mmap_file
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas        28 Apr 17 11:44 wrapper_checkpoint.txt
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas      4662 Apr 17 11:44 pilotlog.txt
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas   2869579 Apr 17 11:44 log.44075483._048603.job.log.1
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas       357 Apr 17 11:44 output.list
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas       620 Apr 17 11:44 runtime_log
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas   3502080 Apr 17 11:44 result.tar.gz
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas     11421 Apr 17 11:44 runtime_log.err
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas       663 Apr 17 11:44 mPSKDmFRTP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm3gbLDmpYHSam.diag
[2025-04-17 11:44:42] -rw-r--r-- 1 boincer umatlas     21011 Apr 17 11:44 stderr.txt
[2025-04-17 11:44:42] HITS file was successfully produced:
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas 194941780 Apr 17 11:41 shared/HITS.pool.root.1
[2025-04-17 11:44:42]  *** Contents of shared directory: ***
[2025-04-17 11:44:42] total 413096
[2025-04-17 11:44:42] -rw-r--r-- 2 boincer umatlas 224021508 Apr 17 00:41 ATLAS.root_0
[2025-04-17 11:44:42] -rw-r--r-- 2 boincer umatlas     17569 Apr 17 00:41 start_atlas.sh
[2025-04-17 11:44:42] -rw-r--r-- 2 boincer umatlas    508883 Apr 17 00:41 input.tar.gz
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas 194941780 Apr 17 11:41 HITS.pool.root.1
[2025-04-17 11:44:42] -rw------- 1 boincer umatlas   3502080 Apr 17 11:44 result.tar.gz
11:44:43 (16563): run_atlas exited; CPU time 56768.191899
11:44:43 (16563): called boinc_finish(0)

</stderr_txt>
]]>

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