Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 08:23:12 (6476): Detected: vboxwrapper 26206
2025-04-17 08:23:12 (6476): Detected: BOINC client v8.0.2
2025-04-17 08:23:13 (6476): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-04-17 08:23:13 (6476): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 08:23:14 (6476): Create VM. (boinc_7c6469ff59278d6e, slot#10)
2025-04-17 08:23:14 (6476): Setting Memory Size for VM. (4800MB)
2025-04-17 08:23:14 (6476): Setting CPU Count for VM. (8)
2025-04-17 08:23:15 (6476): Setting Chipset Options for VM.
2025-04-17 08:23:15 (6476): Setting Graphics Controller Options for VM.
2025-04-17 08:23:15 (6476): Setting Boot Options for VM.
2025-04-17 08:23:15 (6476): Setting Network Configuration for NAT.
2025-04-17 08:23:16 (6476): Enabling VM Network Access.
2025-04-17 08:23:16 (6476): Disabling USB Support for VM.
2025-04-17 08:23:16 (6476): Disabling COM Port Support for VM.
2025-04-17 08:23:16 (6476): Disabling LPT Port Support for VM.
2025-04-17 08:23:17 (6476): Disabling Audio Support for VM.
2025-04-17 08:23:17 (6476): Disabling Clipboard Support for VM.
2025-04-17 08:23:17 (6476): Disabling Drag and Drop Support for VM.
2025-04-17 08:23:17 (6476): Adding storage controller(s) to VM.
2025-04-17 08:23:18 (6476): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 08:23:18 (6476): Adding VirtualBox Guest Additions to VM.
2025-04-17 08:23:18 (6476): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 08:23:19 (6476): forwarding host port 59653 to guest port 80
2025-04-17 08:23:19 (6476): Enabling remote desktop for VM.
2025-04-17 08:23:19 (6476): Enabling shared directory for VM.
2025-04-17 08:23:20 (6476): Starting VM using VBoxManage interface. (boinc_7c6469ff59278d6e, slot#10)
2025-04-17 08:23:24 (6476): Successfully started VM. (PID = '5460')
2025-04-17 08:23:24 (6476): Reporting VM Process ID to BOINC.
2025-04-17 08:23:24 (6476): Guest Log: BIOS: VirtualBox 7.0.22
2025-04-17 08:23:24 (6476): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 08:23:24 (6476): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 08:23:24 (6476): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 08:23:24 (6476): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 08:23:24 (6476): Detected: Web Application Enabled (http://localhost:59653)
2025-04-17 08:23:24 (6476): Detected: Remote Desktop Enabled (localhost:59654)
2025-04-17 08:23:24 (6476): Preference change detected
2025-04-17 08:23:24 (6476): Setting CPU throttle for VM. (90%)
2025-04-17 08:23:25 (6476): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 08:23:26 (6476): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 08:23:26 (6476): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 08:23:29 (6476): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 08:23:29 (6476): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 08:23:29 (6476): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 08:23:35 (6476): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 08:23:35 (6476): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 08:23:39 (6476): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 08:23:39 (6476): Guest Log: 00:00:00.000122 main     Log opened 2025-04-17T08:23:37.528653000Z
2025-04-17 08:23:39 (6476): Guest Log: 00:00:00.000207 main     OS Product: Linux
2025-04-17 08:23:39 (6476): Guest Log: 00:00:00.000237 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 08:23:39 (6476): Guest Log: 00:00:00.000262 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 08:23:39 (6476): Guest Log: 00:00:00.000295 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 08:23:39 (6476): Guest Log: 00:00:00.000295 main     Process ID: 1363
2025-04-17 08:23:39 (6476): Guest Log: 00:00:00.000296 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 08:23:39 (6476): Guest Log: 00:00:00.001089 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 08:23:39 (6476): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 08:23:39 (6476): Guest Log: [INFO] Mounting shared directory
2025-04-17 08:23:39 (6476): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 08:23:42 (6476): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 08:23:42 (6476): Guest Log: [INFO] Detected branch: prod
2025-04-17 08:23:42 (6476): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 08:23:42 (6476): Guest Log: Copying input files
2025-04-17 08:23:43 (6476): Guest Log: Copied input files into RunAtlas.
2025-04-17 08:23:43 (6476): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-04-17 08:23:49 (6476): Guest Log: 00:00:10.014908 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 442 918 000ns (GuestNow=1 744 867 429 088 240 000 ns GuestLast=1 744 878 217 531 158 000 ns fSetTimeLastLoop=true )
2025-04-17 08:23:51 (6476): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 08:23:51 (6476): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 08:23:51 (6476): Guest Log: 2.6.3.0 1641 0 31624 144950 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-04-17 08:23:51 (6476): Guest Log: copied the webapp to /var/www
2025-04-17 08:23:52 (6476): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-17 08:23:52 (6476): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-17 08:23:52 (6476): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 08:23:52 (6476): Guest Log:  *** Starting ATLAS job. (PandaID=6604773664 taskID=44075483) ***
2025-04-17 08:26:25 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 08:26:44 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 08:32:25 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 08:32:45 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 08:36:35 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 08:36:55 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 08:37:26 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 08:37:46 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 08:47:17 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 08:47:37 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 08:52:07 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 08:52:27 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 08:55:28 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 08:55:48 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 09:00:48 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 09:01:08 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 09:08:19 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 09:08:40 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 09:25:00 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 09:25:21 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 09:28:42 (6476): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 09:29:02 (6476): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 09:33:30 (6476): Guest Log:  *** Job finished ***
2025-04-17 09:33:30 (6476): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:39,493 | INFO     | [data] queue_monitor thread has finished
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:43,550 | INFO     | job.realtimelogging is not enabled
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:44,553 | INFO     | [payload] run_realtimelog thread has finished
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:45,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140045025355584)>', '<ExcThread(monitor, started 140043842742016)>']
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:45,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:45,425 | INFO     | [monitor] control thread has ended
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,051 | INFO     | all workflow threads have been joined
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,051 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,051 | INFO     | traces error code: 0
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,114 [wrapper] ==== pilot stdout END ====
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,121 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,126 [wrapper] pilotpid: 5997
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,130 [wrapper] Pilot exit status: 0
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,150 [wrapper] pandaids: 6604773664
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,180 [wrapper] cleanup supervisor_pilot 21739 5998
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,185 [wrapper] Test setup, not cleaning
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,189 [wrapper] apfmon messages muted
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,193 [wrapper] ==== wrapper stdout END ====
2025-04-17 09:33:30 (6476): Guest Log: 2025-04-17 06:29:50,197 [wrapper] ==== wrapper stderr END ====
2025-04-17 09:33:30 (6476): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 09:33:30 (6476): Guest Log:     "exeErrorCode": 0,
2025-04-17 09:33:30 (6476): Guest Log:     "exeErrorDiag": "",
2025-04-17 09:33:30 (6476): Guest Log:     "pilotErrorCode": 0,
2025-04-17 09:33:30 (6476): Guest Log:     "pilotErrorDiag": "",
2025-04-17 09:33:30 (6476): Guest Log:  *** Listing of results directory ***
2025-04-17 09:33:30 (6476): Guest Log: total 196712
2025-04-17 09:33:30 (6476): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 00:55 pilot3.tar.gz
2025-04-17 09:33:30 (6476): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 00:58 runpilot2-wrapper.sh
2025-04-17 09:33:30 (6476): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 00:58 queuedata.json
2025-04-17 09:33:30 (6476): Guest Log: -rwxr-xr-x. 1 atlas atlas      9263 Apr 17 05:23 init_data.xml
2025-04-17 09:33:30 (6476): Guest Log: -rwxr-xr-x. 1 atlas atlas    508884 Apr 17 05:23 input.tar.gz
2025-04-17 09:33:30 (6476): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 05:23 start_atlas.sh
2025-04-17 09:33:30 (6476): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 05:23 EVNT.44075481._001883.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 09:33:30 (6476): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 17 05:23 pandaJob.out
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas       479 Apr 17 05:23 setup.sh.local
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas    986416 Apr 17 05:24 agis_schedconf.cvmfs.json
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 17 05:24 agis_ddmendpoints.agis.ALL.json
2025-04-17 09:33:30 (6476): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 05:24 pilot3
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas        95 Apr 17 06:28 pilot_heartbeat.json
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas 196325940 Apr 17 06:29 HITS.44075483._048181.pool.root.1
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas      1027 Apr 17 06:29 memory_monitor_summary.json
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas    295611 Apr 17 06:29 log.44075483._048181.job.log.tgz.1
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas      7714 Apr 17 06:29 heartbeat.json
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas      4794 Apr 17 06:29 pilotlog.txt
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas    366622 Apr 17 06:29 log.44075483._048181.job.log.1
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 06:29 output.list
2025-04-17 09:33:30 (6476): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 06:29 runtime_log
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas    686080 Apr 17 06:29 result.tar.gz
2025-04-17 09:33:30 (6476): Guest Log: -rw-r--r--. 1 atlas atlas     11409 Apr 17 06:29 runtime_log.err
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas       650 Apr 17 06:29 rAfNDmSlSP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmZK3KDmJ7vlgm.diag
2025-04-17 09:33:30 (6476): Guest Log: Looking for outputfile HITS.44075483._048181.pool.root.1
2025-04-17 09:33:30 (6476): Guest Log: HITS file was successfully produced
2025-04-17 09:33:30 (6476): Guest Log: -rw-------. 1 atlas atlas 196325940 Apr 17 06:29 /home/atlas/RunAtlas/HITS.44075483._048181.pool.root.1
2025-04-17 09:33:31 (6476): Guest Log: Successfully finished the ATLAS job!
2025-04-17 09:33:31 (6476): Guest Log: Copying the results back to the shared directory!
2025-04-17 09:33:31 (6476): Guest Log:  *** Contents of shared directory: ***
2025-04-17 09:33:31 (6476): Guest Log: total 411160
2025-04-17 09:33:31 (6476): Guest Log: -rwxrwxrwx. 1 root root 223463755 Apr 17 05:23 ATLAS.root_0
2025-04-17 09:33:31 (6476): Guest Log: -rwxrwxrwx. 1 root root 196325940 Apr 17  2025 HITS.pool.root.1
2025-04-17 09:33:31 (6476): Guest Log: -rwxrwxrwx. 1 root root      9263 Apr 17 05:23 init_data.xml
2025-04-17 09:33:31 (6476): Guest Log: -rwxrwxrwx. 1 root root    508884 Apr 17 03:52 input.tar.gz
2025-04-17 09:33:31 (6476): Guest Log: -rwxrwxrwx. 1 root root    686080 Apr 17  2025 result.tar.gz
2025-04-17 09:33:31 (6476): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 03:52 start_atlas.sh
2025-04-17 09:33:31 (6476): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 09:33:31 (6476): VM Completion File Detected.
2025-04-17 09:33:31 (6476): Powering off VM.
2025-04-17 09:33:31 (6476): Successfully stopped VM.
2025-04-17 09:33:31 (6476): Deregistering VM. (boinc_7c6469ff59278d6e, slot#10)
2025-04-17 09:33:31 (6476): Removing network bandwidth throttle group from VM.
2025-04-17 09:33:32 (6476): Removing VM from VirtualBox.
09:33:37 (6476): called boinc_finish(0)

</stderr_txt>
]]>

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