Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 05:45:00 (85575): Detected: vboxwrapper 26206
2025-04-17 05:45:00 (85575): Detected: BOINC client v8.0.4
2025-04-17 05:45:01 (85575): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-04-17 05:45:01 (85575): Detected: Sandbox Configuration Enabled
2025-04-17 05:45:01 (85575): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 05:45:01 (85575): Create VM. (boinc_7a969dc9ed646683, slot#0)
2025-04-17 05:45:02 (85575): Setting Memory Size for VM. (4600MB)
2025-04-17 05:45:02 (85575): Setting CPU Count for VM. (6)
2025-04-17 05:45:02 (85575): Setting Chipset Options for VM.
2025-04-17 05:45:02 (85575): Setting Graphics Controller Options for VM.
2025-04-17 05:45:02 (85575): Setting Boot Options for VM.
2025-04-17 05:45:03 (85575): Setting Network Configuration for NAT.
2025-04-17 05:45:03 (85575): Enabling VM Network Access.
2025-04-17 05:45:03 (85575): Disabling USB Support for VM.
2025-04-17 05:45:03 (85575): Disabling COM Port Support for VM.
2025-04-17 05:45:03 (85575): Disabling Audio Support for VM.
2025-04-17 05:45:03 (85575): Disabling Clipboard Support for VM.
2025-04-17 05:45:04 (85575): Disabling Drag and Drop Support for VM.
2025-04-17 05:45:04 (85575): Adding storage controller(s) to VM.
2025-04-17 05:45:04 (85575): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 05:45:06 (85575): Adding VirtualBox Guest Additions to VM.
2025-04-17 05:45:06 (85575): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 05:45:06 (85575): forwarding host port 62601 to guest port 80
2025-04-17 05:45:06 (85575): Enabling remote desktop for VM.
2025-04-17 05:45:07 (85575): Enabling shared directory for VM.
2025-04-17 05:45:07 (85575): Starting VM using VBoxManage interface. (boinc_7a969dc9ed646683, slot#0)
2025-04-17 05:45:13 (85575): Successfully started VM. (PID = '85730')
2025-04-17 05:45:13 (85575): Reporting VM Process ID to BOINC.
2025-04-17 05:45:13 (85575): Guest Log: BIOS: VirtualBox 7.0.22
2025-04-17 05:45:13 (85575): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 05:45:13 (85575): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 05:45:13 (85575): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 05:45:13 (85575): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 05:45:13 (85575): Detected: Web Application Enabled (http://localhost:62601)
2025-04-17 05:45:13 (85575): Detected: Remote Desktop Enabled (localhost:54097)
2025-04-17 05:45:13 (85575): Preference change detected
2025-04-17 05:45:13 (85575): Setting CPU throttle for VM. (100%)
2025-04-17 05:45:13 (85575): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 05:45:15 (85575): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 05:45:15 (85575): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 05:45:19 (85575): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 05:45:19 (85575): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 05:45:19 (85575): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 05:45:36 (85575): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 05:45:36 (85575): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 05:45:58 (85575): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 05:45:58 (85575): Guest Log: 00:00:00.000225 main     Log opened 2025-04-17T03:45:57.000557000Z
2025-04-17 05:45:58 (85575): Guest Log: 00:00:00.000421 main     OS Product: Linux
2025-04-17 05:45:58 (85575): Guest Log: 00:00:00.000498 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 05:45:58 (85575): Guest Log: 00:00:00.000561 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 05:45:58 (85575): Guest Log: 00:00:00.000625 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 05:45:58 (85575): Guest Log: 00:00:00.000626 main     Process ID: 1335
2025-04-17 05:45:58 (85575): Guest Log: 00:00:00.000627 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 05:45:58 (85575): Guest Log: 00:00:00.006141 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 05:45:59 (85575): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 05:45:59 (85575): Guest Log: [INFO] Mounting shared directory
2025-04-17 05:45:59 (85575): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 05:46:28 (85575): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 05:46:28 (85575): Guest Log: [INFO] Detected branch: prod
2025-04-17 05:46:28 (85575): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 05:46:28 (85575): Guest Log: Copying input files
2025-04-17 05:46:31 (85575): Guest Log: Copied input files into RunAtlas.
2025-04-17 05:46:31 (85575): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-17 05:46:31 (85575): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-17 05:46:31 (85575): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-17 05:46:31 (85575): Guest Log: Further information can be found at the LHC@home message board.
2025-04-17 05:46:58 (85575): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 05:46:58 (85575): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 05:46:58 (85575): Guest Log: 2.6.3.0 1634 0 32220 144948 4 1 3117322 4096000 0 65024 0 0 n/a 1 2 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
2025-04-17 05:46:59 (85575): Guest Log: copied the webapp to /var/www
2025-04-17 05:46:59 (85575): Guest Log: ATHENA_PROC_NUMBER=6
2025-04-17 05:46:59 (85575): Guest Log: ATHENA_CORE_NUMBER=6
2025-04-17 05:46:59 (85575): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 05:46:59 (85575): Guest Log:  *** Starting ATLAS job. (PandaID=6604773475 taskID=44075483) ***
2025-04-17 07:18:31 (85575): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 07:59:18 (85575): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 07:59:26 (85575): Guest Log: 01:32:36.125949 timesync vgsvcTimeSyncWorker: Radical host time change: 2 447 937 000 000ns (HostNow=1 744 869 538 209 000 000 ns HostLast=1 744 867 090 272 000 000 ns)
2025-04-17 07:59:36 (85575): Guest Log: 01:32:46.152804 timesync vgsvcTimeSyncWorker: Radical guest time change: 2 435 331 910 000ns (GuestNow=1 744 869 548 346 867 000 ns GuestLast=1 744 867 113 014 957 000 ns fSetTimeLastLoop=true )
2025-04-17 08:00:52 (85575): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 08:05:07 (85575): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 08:10:19 (85575): Status Report: Elapsed Time: '6000.000000'
2025-04-17 08:10:19 (85575): Status Report: CPU Time: '23830.470000'
2025-04-17 09:15:52 (85575): Guest Log:  *** Job finished ***
2025-04-17 09:15:52 (85575): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:10:54,298 | INFO     | [data] queue_monitor thread has finished
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:10:58,790 | INFO     | job.realtimelogging is not enabled
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:10:59,791 | INFO     | [payload] run_realtimelog thread has finished
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:01,357 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140504731813696)>', '<ExcThread(monitor, started 140504436020992)>']
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:02,149 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:02,149 | INFO     | [monitor] control thread has ended
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,362 | INFO     | all workflow threads have been joined
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,362 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,363 | INFO     | traces error code: 0
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,363 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,532 [wrapper] ==== pilot stdout END ====
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,547 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,564 [wrapper] pilotpid: 6056
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,581 [wrapper] Pilot exit status: 0
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,760 [wrapper] pandaids: 6604773475
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,875 [wrapper] cleanup supervisor_pilot  4982 6057
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,891 [wrapper] Test setup, not cleaning
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,910 [wrapper] apfmon messages muted
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,926 [wrapper] ==== wrapper stdout END ====
2025-04-17 09:15:52 (85575): Guest Log: 2025-04-17 07:11:06,942 [wrapper] ==== wrapper stderr END ====
2025-04-17 09:15:52 (85575): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 09:15:52 (85575): Guest Log:     "exeErrorCode": 0,
2025-04-17 09:15:52 (85575): Guest Log:     "exeErrorDiag": "",
2025-04-17 09:15:52 (85575): Guest Log:     "pilotErrorCode": 0,
2025-04-17 09:15:52 (85575): Guest Log:     "pilotErrorDiag": "",
2025-04-17 09:15:52 (85575): Guest Log:  *** Listing of results directory ***
2025-04-17 09:15:52 (85575): Guest Log: total 193168
2025-04-17 09:15:52 (85575): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 17 00:28 pilot3.tar.gz
2025-04-17 09:15:52 (85575): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 17 00:40 queuedata.json
2025-04-17 09:15:52 (85575): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 17 00:41 runpilot2-wrapper.sh
2025-04-17 09:15:52 (85575): Guest Log: -rw-r-----. 1 atlas atlas     17569 Apr 17 03:46 start_atlas.sh
2025-04-17 09:15:52 (85575): Guest Log: -rw-r-----. 1 atlas atlas    508888 Apr 17 03:46 input.tar.gz
2025-04-17 09:15:52 (85575): Guest Log: -rw-r--r--. 1 atlas atlas      7861 Apr 17 03:46 init_data.xml
2025-04-17 09:15:52 (85575): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 03:46 EVNT.44075481._001876.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 09:15:52 (85575): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 17 03:46 pandaJob.out
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 03:47 setup.sh.local
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas    986424 Apr 17 03:52 agis_schedconf.cvmfs.json
2025-04-17 09:15:52 (85575): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 03:52 pilot3
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas 192282570 Apr 17 07:09 HITS.44075483._047995.pool.root.1
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas        97 Apr 17 07:10 pilot_heartbeat.json
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas      1033 Apr 17 07:10 memory_monitor_summary.json
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas   1614392 Apr 17 07:10 agis_ddmendpoints.agis.ALL.json
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas    283730 Apr 17 07:10 log.44075483._047995.job.log.tgz.1
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas      7730 Apr 17 07:10 heartbeat.json
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas      4485 Apr 17 07:11 pilotlog.txt
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas    584077 Apr 17 07:11 log.44075483._047995.job.log.1
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 07:11 output.list
2025-04-17 09:15:52 (85575): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 07:11 runtime_log
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas    890880 Apr 17 07:11 result.tar.gz
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas       649 Apr 17 07:11 yLtLDmMVSP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbabLDmcET6Em.diag
2025-04-17 09:15:52 (85575): Guest Log: -rw-r--r--. 1 atlas atlas     10918 Apr 17 07:11 runtime_log.err
2025-04-17 09:15:52 (85575): Guest Log: Looking for outputfile HITS.44075483._047995.pool.root.1
2025-04-17 09:15:52 (85575): Guest Log: HITS file was successfully produced
2025-04-17 09:15:52 (85575): Guest Log: -rw-------. 1 atlas atlas 192282570 Apr 17 07:09 /home/atlas/RunAtlas/HITS.44075483._047995.pool.root.1
2025-04-17 09:15:52 (85575): Guest Log: Successfully finished the ATLAS job!
2025-04-17 09:15:52 (85575): Guest Log: Copying the results back to the shared directory!
2025-04-17 09:15:52 (85575): Guest Log:  *** Contents of shared directory: ***
2025-04-17 09:15:52 (85575): Guest Log: total 219176
2025-04-17 09:15:52 (85575): Guest Log: -rw-rw----. 1 root root 222999515 Apr 17 03:45 ATLAS.root_0
2025-04-17 09:15:52 (85575): Guest Log: -rw-rw-r--. 1 root root      7861 Apr 17 03:45 init_data.xml
2025-04-17 09:15:52 (85575): Guest Log: -rw-rw----. 1 root root    508888 Apr 17 03:45 input.tar.gz
2025-04-17 09:15:52 (85575): Guest Log: -rw-r--r--. 1 root root    890880 Apr 17  2025 result.tar.gz
2025-04-17 09:15:52 (85575): Guest Log: -rw-rw----. 1 root root     17569 Apr 17 03:45 start_atlas.sh
2025-04-17 09:15:52 (85575): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 09:15:52 (85575): VM Completion File Detected.
2025-04-17 09:15:52 (85575): Powering off VM.
2025-04-17 09:15:53 (85575): Successfully stopped VM.
2025-04-17 09:15:53 (85575): Deregistering VM. (boinc_7a969dc9ed646683, slot#0)
2025-04-17 09:15:53 (85575): Removing network bandwidth throttle group from VM.
2025-04-17 09:15:53 (85575): Removing VM from VirtualBox.
09:15:59 (85575): called boinc_finish(0)

</stderr_txt>
]]>

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