Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:08:47 (12611): wrapper (7.7.26015): starting
22:08:47 (12611): wrapper: running run_atlas (--nthreads 10)
[2025-04-16 22:08:47] Arguments: --nthreads 10
[2025-04-16 22:08:47] Threads: 10
[2025-04-16 22:08:47] Checking for CVMFS
[2025-04-16 22:08:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 22:08:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 22:08:49] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 22:08:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 22:08:51] 2.11.2.0 21608 35656 258188 144945 3 60 14080829 18432000 16273 130560 0 142620220 98.897 375130035 37206 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-16 22:08:51] CVMFS is ok
[2025-04-16 22:08:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 22:08:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 22:08:51] Further information can be found at the LHC@home message board.
[2025-04-16 22:08:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 22:08:51] Checking for apptainer binary...
[2025-04-16 22:08:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 22:08:51] Running /usr/bin/apptainer --version
[2025-04-16 22:08:51] apptainer version 1.3.2-1.el7
[2025-04-16 22:08:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 22:09:33] c-211-16.aglt2.org
[2025-04-16 22:09:33] apptainer works
[2025-04-16 22:09:33] Set ATHENA_PROC_NUMBER=10
[2025-04-16 22:09:33] Set ATHENA_CORE_NUMBER=10
[2025-04-16 22:09:34] Starting ATLAS job with PandaID=6604643291
[2025-04-16 22:09:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 19:59:09]  *** The last 200 lines of the pilot log: ***
[2025-04-17 19:59:09] 2025-04-17 23:58:22,826 | INFO     | monitor loop #3401: job 0:6604643291 is in state 'finished'
[2025-04-17 19:59:09] 2025-04-17 23:58:22,826 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 19:59:09] 2025-04-17 23:58:25,334 | INFO     | monitor loop #3402: job 0:6604643291 is in state 'finished'
[2025-04-17 19:59:09] 2025-04-17 23:58:25,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 19:59:09] 2025-04-17 23:58:27,839 | INFO     | monitor loop #3403: job 0:6604643291 is in state 'finished'
[2025-04-17 19:59:09] 2025-04-17 23:58:27,839 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 19:59:09] 2025-04-17 23:58:30,345 | INFO     | monitor loop #3404: job 0:6604643291 is in state 'finished'
[2025-04-17 19:59:09] 2025-04-17 23:58:30,350 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 19:59:09] 2025-04-17 23:58:32,856 | INFO     | monitor loop #3405: job 0:6604643291 is in state 'finished'
[2025-04-17 19:59:09] 2025-04-17 23:58:32,856 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 19:59:09] 2025-04-17 23:58:35,361 | INFO     | monitor loop #3406: job 0:6604643291 is in state 'finished'
[2025-04-17 19:59:09] 2025-04-17 23:58:35,364 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 19:59:09] 2025-04-17 23:58:37,870 | INFO     | monitor loop #3407: job 0:6604643291 is in state 'finished'
[2025-04-17 19:59:09] 2025-04-17 23:58:37,870 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 19:59:09] 2025-04-17 23:58:38,815 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-17 19:59:09] 2025-04-17 23:58:38,815 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6604643291/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 19:59:09] 2025-04-17 23:58:38,817 | INFO     | extracted standard info from prmon json
[2025-04-17 19:59:09] 2025-04-17 23:58:38,817 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 19:59:09] 2025-04-17 23:58:38,817 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 19:59:09] 2025-04-17 23:58:38,819 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 19:59:09] 2025-04-17 23:58:38,819 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 19:59:09] 2025-04-17 23:58:38,849 | INFO     | fitting pss+swap vs Time
[2025-04-17 19:59:09] 2025-04-17 23:58:38,851 | INFO     | sum of square deviations: 641194046188.0476
[2025-04-17 19:59:09] 2025-04-17 23:58:38,900 | INFO     | sum of deviations: 3288011022095.247
[2025-04-17 19:59:09] 2025-04-17 23:58:38,900 | INFO     | mean x: 1744895342.865777
[2025-04-17 19:59:09] 2025-04-17 23:58:38,900 | INFO     | mean y: 2506272.6271585557
[2025-04-17 19:59:09] 2025-04-17 23:58:38,900 | INFO     | -- intersect: -8945229836.04959
[2025-04-17 19:59:09] 2025-04-17 23:58:38,900 | INFO     | intersect: -8945229836.04959
[2025-04-17 19:59:09] 2025-04-17 23:58:38,902 | INFO     | chi2: 21.992161155288503
[2025-04-17 19:59:09] 2025-04-17 23:58:38,904 | INFO     | sum of square deviations: 633674835886.1852
[2025-04-17 19:59:09] 2025-04-17 23:58:38,946 | INFO     | sum of deviations: 3362846620367.4854
[2025-04-17 19:59:09] 2025-04-17 23:58:38,947 | INFO     | mean x: 1744895190.3711584
[2025-04-17 19:59:09] 2025-04-17 23:58:38,947 | INFO     | mean y: 2507784.4830575255
[2025-04-17 19:59:09] 2025-04-17 23:58:38,947 | INFO     | -- intersect: -9257469985.707352
[2025-04-17 19:59:09] 2025-04-17 23:58:38,947 | INFO     | intersect: -9257469985.707352
[2025-04-17 19:59:09] 2025-04-17 23:58:38,949 | INFO     | chi2: 21.198247944659045
[2025-04-17 19:59:09] 2025-04-17 23:58:38,949 | INFO     | current chi2=21.198247944659045 (change=3.609982688938893 %)
[2025-04-17 19:59:09] 2025-04-17 23:58:38,949 | INFO     | right removable region: 1268
[2025-04-17 19:59:09] 2025-04-17 23:58:38,951 | INFO     | sum of square deviations: 633673774486.1841
[2025-04-17 19:59:09] 2025-04-17 23:58:39,006 | INFO     | sum of deviations: 2808543896307.4424
[2025-04-17 19:59:09] 2025-04-17 23:58:39,006 | INFO     | mean x: 1744895495.3711584
[2025-04-17 19:59:09] 2025-04-17 23:58:39,006 | INFO     | mean y: 2515995.525610717
[2025-04-17 19:59:09] 2025-04-17 23:58:39,006 | INFO     | -- intersect: -7731140959.415745
[2025-04-17 19:59:09] 2025-04-17 23:58:39,007 | INFO     | intersect: -7731140959.415745
[2025-04-17 19:59:09] 2025-04-17 23:58:39,008 | INFO     | chi2: 16.696677129964055
[2025-04-17 19:59:09] 2025-04-17 23:58:39,009 | INFO     | current chi2=16.696677129964055 (change=24.07896153512422 %)
[2025-04-17 19:59:09] 2025-04-17 23:58:39,009 | INFO     | left removable region: 10
[2025-04-17 19:59:09] 2025-04-17 23:58:39,012 | INFO     | sum of square deviations: 617337888729.8228
[2025-04-17 19:59:09] 2025-04-17 23:58:39,067 | INFO     | sum of deviations: 2464910830059.3535
[2025-04-17 19:59:09] 2025-04-17 23:58:39,067 | INFO     | mean x: 1744895464.883148
[2025-04-17 19:59:09] 2025-04-17 23:58:39,067 | INFO     | mean y: 2526093.0023847376
[2025-04-17 19:59:09] 2025-04-17 23:58:39,068 | INFO     | -- intersect: -6964504130.2053385
[2025-04-17 19:59:09] 2025-04-17 23:58:39,068 | INFO     | intersect: -6964504130.2053385
[2025-04-17 19:59:09] 2025-04-17 23:58:39,071 | INFO     | chi2: 11.963672690275267
[2025-04-17 19:59:09] 2025-04-17 23:58:39,072 | INFO     | -- intersect: -6964504130.2053385
[2025-04-17 19:59:09] 2025-04-17 23:58:39,072 | INFO     | current memory leak: 3.99 B/s (using 1258 data points, chi2=11.96)
[2025-04-17 19:59:09] 2025-04-17 23:58:39,073 | INFO     | ..............................
[2025-04-17 19:59:09] 2025-04-17 23:58:39,074 | INFO     | . Timing measurements:
[2025-04-17 19:59:09] 2025-04-17 23:58:39,074 | INFO     | . get job = 1 s
[2025-04-17 19:59:09] 2025-04-17 23:58:39,074 | INFO     | . initial setup = 19 s
[2025-04-17 19:59:09] 2025-04-17 23:58:39,074 | INFO     | . payload setup = 163 s
[2025-04-17 19:59:09] 2025-04-17 23:58:39,074 | INFO     | . stage-in = 1 s
[2025-04-17 19:59:09] 2025-04-17 23:58:39,074 | INFO     | . payload execution = 77916 s
[2025-04-17 19:59:09] 2025-04-17 23:58:39,074 | INFO     | . stage-out = 14 s
[2025-04-17 19:59:09] 2025-04-17 23:58:39,074 | INFO     | . log creation = 3 s
[2025-04-17 19:59:09] 2025-04-17 23:58:39,074 | INFO     | ..............................
[2025-04-17 19:59:09] 2025-04-17 23:58:39,371 | INFO     | 
[2025-04-17 19:59:09] 2025-04-17 23:58:39,372 | INFO     | job summary report
[2025-04-17 19:59:09] 2025-04-17 23:58:39,372 | INFO     | --------------------------------------------------
[2025-04-17 19:59:09] 2025-04-17 23:58:39,372 | INFO     | PanDA job id: 6604643291
[2025-04-17 19:59:09] 2025-04-17 23:58:39,372 | INFO     | task id: 44075483
[2025-04-17 19:59:09] 2025-04-17 23:58:39,372 | INFO     | errors: (none)
[2025-04-17 19:59:09] 2025-04-17 23:58:39,372 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 19:59:09] 2025-04-17 23:58:39,373 | INFO     | pilot state: finished 
[2025-04-17 19:59:09] 2025-04-17 23:58:39,373 | INFO     | transexitcode: 0
[2025-04-17 19:59:09] 2025-04-17 23:58:39,373 | INFO     | exeerrorcode: 0
[2025-04-17 19:59:09] 2025-04-17 23:58:39,373 | INFO     | exeerrordiag: 
[2025-04-17 19:59:09] 2025-04-17 23:58:39,373 | INFO     | exitcode: 0
[2025-04-17 19:59:09] 2025-04-17 23:58:39,374 | INFO     | exitmsg: OK
[2025-04-17 19:59:09] 2025-04-17 23:58:39,374 | INFO     | cpuconsumptiontime: 59263 s
[2025-04-17 19:59:09] 2025-04-17 23:58:39,374 | INFO     | nevents: 400
[2025-04-17 19:59:09] 2025-04-17 23:58:39,374 | INFO     | neventsw: 0
[2025-04-17 19:59:09] 2025-04-17 23:58:39,374 | INFO     | pid: 33018
[2025-04-17 19:59:09] 2025-04-17 23:58:39,374 | INFO     | pgrp: 33018
[2025-04-17 19:59:09] 2025-04-17 23:58:39,374 | INFO     | corecount: 10
[2025-04-17 19:59:09] 2025-04-17 23:58:39,374 | INFO     | event service: False
[2025-04-17 19:59:09] 2025-04-17 23:58:39,374 | INFO     | sizes: {0: 2416538, 1: 2417223, 2: 2417422, 3: 2417422, 15: 2417450, 27: 2417478, 39: 2417634, 50: 2417662, 62: 2417690, 74: 2417718, 82: 2417952, 86: 2418288, 780
[2025-04-17 19:59:09] 2025-04-17 23:58:39,375 | INFO     | --------------------------------------------------
[2025-04-17 19:59:09] 2025-04-17 23:58:39,375 | INFO     | 
[2025-04-17 19:59:09] 2025-04-17 23:58:39,375 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 19:59:09] 2025-04-17 23:58:39,653 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,653 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,654 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,654 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,655 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,655 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,655 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 19:59:09] 2025-04-17 23:58:39,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,655 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 19:59:09] 2025-04-17 23:58:39,656 | INFO     | job 6604643291 has completed (purged errors)
[2025-04-17 19:59:09] 2025-04-17 23:58:39,656 | INFO     | overall cleanup function is called
[2025-04-17 19:59:09] 2025-04-17 23:58:40,708 | INFO     | --- collectZombieJob: --- 10, [33018]
[2025-04-17 19:59:09] 2025-04-17 23:58:40,708 | INFO     | zombie collector waiting for pid 33018
[2025-04-17 19:59:09] 2025-04-17 23:58:40,708 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 19:59:09] 2025-04-17 23:58:40,708 | INFO     | collected zombie processes
[2025-04-17 19:59:09] 2025-04-17 23:58:40,708 | INFO     | will attempt to kill all subprocesses of pid=33018
[2025-04-17 19:59:09] 2025-04-17 23:58:47,924 | INFO     | process IDs to be killed: [33018] (in reverse order)
[2025-04-17 19:59:09] 2025-04-17 23:58:49,678 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 19:59:09] 2025-04-17 23:58:49,678 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 19:59:09] 2025-04-17 23:58:50,003 | INFO     | PID=35210 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-04-17 19:59:09] 2025-04-17 23:58:50,003 | INFO     | .. there are 41 such processes running
[2025-04-17 19:59:09] 2025-04-17 23:58:50,012 | INFO     | did not find any defunct processes belonging to 33018
[2025-04-17 19:59:09] 2025-04-17 23:58:50,152 | INFO     | did not find any defunct processes belonging to 33018
[2025-04-17 19:59:09] 2025-04-17 23:58:50,153 | INFO     | ready for new job
[2025-04-17 19:59:09] 2025-04-17 23:58:50,153 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 19:59:09] 2025-04-17 23:58:50,173 | INFO     | **************************************
[2025-04-17 19:59:09] 2025-04-17 23:58:50,174 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 19:59:09] 2025-04-17 23:58:50,174 | INFO     | **************************************
[2025-04-17 19:59:09] 2025-04-17 23:58:50,174 | INFO     | 
[2025-04-17 19:59:09] 2025-04-17 23:58:50,193 | INFO     | architecture information:
[2025-04-17 19:59:09] 2025-04-17 23:58:50,207 | INFO     | executing command: cat /etc/os-release
[2025-04-17 19:59:09] 2025-04-17 23:58:50,416 | INFO     | cat /etc/os-release:
[2025-04-17 19:59:09] NAME="CentOS Linux"
[2025-04-17 19:59:09] VERSION="7 (Core)"
[2025-04-17 19:59:09] ID="centos"
[2025-04-17 19:59:09] ID_LIKE="rhel fedora"
[2025-04-17 19:59:09] VERSION_ID="7"
[2025-04-17 19:59:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 19:59:09] ANSI_COLOR="0;31"
[2025-04-17 19:59:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 19:59:09] HOME_URL="https://www.centos.org/"
[2025-04-17 19:59:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 19:59:09] 
[2025-04-17 19:59:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 19:59:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 19:59:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 19:59:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 19:59:09] 
[2025-04-17 19:59:09] 2025-04-17 23:58:50,416 | INFO     | **************************************
[2025-04-17 19:59:09] 2025-04-17 23:58:50,919 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 19:59:09] 2025-04-17 23:58:51,095 | INFO     | sufficient remaining disk space (57216598016 B)
[2025-04-17 19:59:09] 2025-04-17 23:58:51,103 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 19:59:09] 2025-04-17 23:58:51,103 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 19:59:09] 2025-04-17 23:58:51,103 | INFO     | update_server=False
[2025-04-17 19:59:09] 2025-04-17 23:58:51,103 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 19:59:09] 2025-04-17 23:58:51,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 19:59:09] 2025-04-17 23:58:51,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 19:59:09] 2025-04-17 23:58:51,514 | INFO     | aborting loop
[2025-04-17 19:59:09] 2025-04-17 23:58:51,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 19:59:09] 2025-04-17 23:58:51,937 | INFO     | all data control threads have been joined
[2025-04-17 19:59:09] 2025-04-17 23:58:52,010 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 19:59:09] 2025-04-17 23:58:52,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 19:59:09] 2025-04-17 23:58:52,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 19:59:09] 2025-04-17 23:58:52,110 | INFO     | [job] retrieve thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:52,328 | INFO     | all job control threads have been joined
[2025-04-17 19:59:09] 2025-04-17 23:58:52,339 | INFO     | [payload] failed_post thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:52,347 | INFO     | all payload control threads have been joined
[2025-04-17 19:59:09] 2025-04-17 23:58:52,460 | INFO     | [payload] validate_post thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:52,542 | INFO     | [job] job monitor thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:52,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 19:59:09] 2025-04-17 23:58:52,595 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:52,596 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:52,602 | INFO     | [job] validate thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:52,606 | INFO     | [data] copytool_in thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:52,644 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:52,891 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:52,943 | INFO     | [data] control thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:53,111 | INFO     | [data] copytool_out thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:53,335 | INFO     | [job] control thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:53,354 | INFO     | [payload] control thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:53,580 | INFO     | [job] queue monitor thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:55,662 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 19:59:09] 2025-04-17 23:58:56,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140545846601536)>', '<ExcThread(monitor, started 140545405998848)>']
[2025-04-17 19:59:09] 2025-04-17 23:58:57,062 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 19:59:09] 2025-04-17 23:58:57,063 | INFO     | [monitor] control thread has ended
[2025-04-17 19:59:09] 2025-04-17 23:59:01,142 | INFO     | all workflow threads have been joined
[2025-04-17 19:59:09] 2025-04-17 23:59:01,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 19:59:09] 2025-04-17 23:59:01,142 | INFO     | traces error code: 0
[2025-04-17 19:59:09] 2025-04-17 23:59:01,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 19:59:09] 2025-04-17 23:59:01,622 [wrapper] ==== pilot stdout END ====
[2025-04-17 19:59:09] 2025-04-17 23:59:01,655 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 19:59:09] 2025-04-17 23:59:01,686 [wrapper] pilotpid: 35210
[2025-04-17 19:59:09] 2025-04-17 23:59:01,711 [wrapper] Pilot exit status: 0
[2025-04-17 19:59:09] 2025-04-17 23:59:01,853 [wrapper] pandaids: 6604643291
[2025-04-17 19:59:09] 2025-04-17 23:59:03,387 [wrapper] cleanup supervisor_pilot 31892 35212
[2025-04-17 19:59:09] 2025-04-17 23:59:03,446 [wrapper] Test setup, not cleaning
[2025-04-17 19:59:09] 2025-04-17 23:59:03,491 [wrapper] apfmon messages muted
[2025-04-17 19:59:09] 2025-04-17 23:59:03,550 [wrapper] ==== wrapper stdout END ====
[2025-04-17 19:59:09] 2025-04-17 23:59:03,596 [wrapper] ==== wrapper stderr END ====
[2025-04-17 19:59:09]  *** Error codes and diagnostics ***
[2025-04-17 19:59:09]     "exeErrorCode": 0,
[2025-04-17 19:59:09]     "exeErrorDiag": "",
[2025-04-17 19:59:09]     "pilotErrorCode": 0,
[2025-04-17 19:59:09]     "pilotErrorDiag": "",
[2025-04-17 19:59:09]  *** Listing of results directory ***
[2025-04-17 19:59:09] total 424956
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 18:52 pilot3.tar.gz
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 19:06 queuedata.json
[2025-04-17 19:59:09] -rwx------ 1 boincer umatlas     37140 Apr 16 19:07 runpilot2-wrapper.sh
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas       100 Apr 16 22:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 19:59:09] -rwxr-xr-x 1 boincer umatlas      7986 Apr 16 22:08 run_atlas
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas       105 Apr 16 22:08 job.xml
[2025-04-17 19:59:09] -rw-r--r-- 2 boincer umatlas 224998324 Apr 16 22:08 EVNT.44075481._001837.pool.root.1
[2025-04-17 19:59:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 22:08 start_atlas.sh
[2025-04-17 19:59:09] drwxrwx--x 2 boincer umatlas      4096 Apr 16 22:08 shared
[2025-04-17 19:59:09] -rw-r--r-- 2 boincer umatlas    508887 Apr 16 22:08 input.tar.gz
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas         0 Apr 16 22:08 boinc_lockfile
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas      2579 Apr 16 22:09 pandaJob.out
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas       467 Apr 16 22:09 setup.sh.local
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas    986560 Apr 16 22:12 agis_schedconf.cvmfs.json
[2025-04-17 19:59:09] drwx------ 4 boincer umatlas      4096 Apr 16 22:13 pilot3
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas 194641545 Apr 17 19:55 HITS.44075483._046971.pool.root.1
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas       531 Apr 17 19:55 boinc_task_state.xml
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas      1059 Apr 17 19:57 memory_monitor_summary.json
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas   1618536 Apr 17 19:57 agis_ddmendpoints.agis.ALL.json
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas    872422 Apr 17 19:57 log.44075483._046971.job.log.tgz.1
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas      6229 Apr 17 19:58 init_data.xml
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas        95 Apr 17 19:58 pilot_heartbeat.json
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas      7776 Apr 17 19:58 heartbeat.json
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas      4353 Apr 17 19:59 pilotlog.txt
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas   4956719 Apr 17 19:59 log.44075483._046971.job.log.1
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas       357 Apr 17 19:59 output.list
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas       620 Apr 17 19:59 runtime_log
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas   5847040 Apr 17 19:59 result.tar.gz
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas     11421 Apr 17 19:59 runtime_log.err
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas       664 Apr 17 19:59 de0LDmD2QP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmwObLDm3QgpJo.diag
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas        28 Apr 17 19:59 wrapper_checkpoint.txt
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 19:59 boinc_mmap_file
[2025-04-17 19:59:09] -rw-r--r-- 1 boincer umatlas     21541 Apr 17 19:59 stderr.txt
[2025-04-17 19:59:09] HITS file was successfully produced:
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas 194641545 Apr 17 19:55 shared/HITS.pool.root.1
[2025-04-17 19:59:09]  *** Contents of shared directory: ***
[2025-04-17 19:59:09] total 416044
[2025-04-17 19:59:09] -rw-r--r-- 2 boincer umatlas 224998324 Apr 16 22:08 ATLAS.root_0
[2025-04-17 19:59:09] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 22:08 start_atlas.sh
[2025-04-17 19:59:09] -rw-r--r-- 2 boincer umatlas    508887 Apr 16 22:08 input.tar.gz
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas 194641545 Apr 17 19:55 HITS.pool.root.1
[2025-04-17 19:59:09] -rw------- 1 boincer umatlas   5847040 Apr 17 19:59 result.tar.gz
19:59:11 (12611): run_atlas exited; CPU time 62043.434308
19:59:11 (12611): called boinc_finish(0)

</stderr_txt>
]]>

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