Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:06:46 (3912973): wrapper (7.7.26015): starting
02:06:46 (3912973): wrapper: running run_atlas (--nthreads 10)
[2025-04-17 02:06:46] Arguments: --nthreads 10
[2025-04-17 02:06:46] Threads: 10
[2025-04-17 02:06:46] Checking for CVMFS
[2025-04-17 02:06:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 02:06:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 02:07:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 02:07:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 02:07:10] 2.12.6.0 1988508 151253 236492 144951 3 68 23820093 32935937 16944 130560 0 94624143 99.661 87710555 25269 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-17 02:07:10] CVMFS is ok
[2025-04-17 02:07:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 02:07:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 02:07:10] Further information can be found at the LHC@home message board.
[2025-04-17 02:07:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 02:07:10] Checking for apptainer binary...
[2025-04-17 02:07:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 02:07:10] Running /usr/bin/apptainer --version
[2025-04-17 02:07:10] apptainer version 1.4.0-1.el9
[2025-04-17 02:07:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 02:07:11] c-5-1.aglt2.org
[2025-04-17 02:07:11] apptainer works
[2025-04-17 02:07:11] Set ATHENA_PROC_NUMBER=10
[2025-04-17 02:07:11] Set ATHENA_CORE_NUMBER=10
[2025-04-17 02:07:11] Starting ATLAS job with PandaID=6604643107
[2025-04-17 02:07:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 08:57:05]  *** The last 200 lines of the pilot log: ***
[2025-04-17 08:57:05] 2025-04-17 12:56:48,400 | INFO     | mean x: 1744882253.8299491
[2025-04-17 08:57:05] 2025-04-17 12:56:48,400 | INFO     | mean y: 2389191.19035533
[2025-04-17 08:57:05] 2025-04-17 12:56:48,400 | INFO     | -- intersect: -26605874998.787125
[2025-04-17 08:57:05] 2025-04-17 12:56:48,400 | INFO     | intersect: -26605874998.787125
[2025-04-17 08:57:05] 2025-04-17 12:56:48,401 | INFO     | chi2: 6.629432642991983
[2025-04-17 08:57:05] 2025-04-17 12:56:48,401 | INFO     | current chi2=6.629432642991983 (change=9.226114726314492 %)
[2025-04-17 08:57:05] 2025-04-17 12:56:48,401 | INFO     | right removable region: 393
[2025-04-17 08:57:05] 2025-04-17 12:56:48,404 | INFO     | sum of square deviations: 18968023742.75389
[2025-04-17 08:57:05] 2025-04-17 12:56:48,409 | INFO     | sum of deviations: 163087523649.78168
[2025-04-17 08:57:05] 2025-04-17 12:56:48,409 | INFO     | mean x: 1744882558.85533
[2025-04-17 08:57:05] 2025-04-17 12:56:48,409 | INFO     | mean y: 2406739.2944162437
[2025-04-17 08:57:05] 2025-04-17 12:56:48,409 | INFO     | -- intersect: -15000135404.407839
[2025-04-17 08:57:05] 2025-04-17 12:56:48,409 | INFO     | intersect: -15000135404.407839
[2025-04-17 08:57:05] 2025-04-17 12:56:48,410 | INFO     | chi2: 4.387990508070961
[2025-04-17 08:57:05] 2025-04-17 12:56:48,410 | INFO     | current chi2=4.387990508070961 (change=39.91718923598753 %)
[2025-04-17 08:57:05] 2025-04-17 12:56:48,410 | INFO     | sum of square deviations: 18254728945.033447
[2025-04-17 08:57:05] 2025-04-17 12:56:48,415 | INFO     | sum of deviations: 77921245611.66338
[2025-04-17 08:57:05] 2025-04-17 12:56:48,415 | INFO     | mean x: 1744882711.395887
[2025-04-17 08:57:05] 2025-04-17 12:56:48,415 | INFO     | mean y: 2424944.1645244216
[2025-04-17 08:57:05] 2025-04-17 12:56:48,415 | INFO     | -- intersect: -7445696292.125623
[2025-04-17 08:57:05] 2025-04-17 12:56:48,415 | INFO     | intersect: -7445696292.125623
[2025-04-17 08:57:05] 2025-04-17 12:56:48,416 | INFO     | chi2: 2.5895241545204692
[2025-04-17 08:57:05] 2025-04-17 12:56:48,416 | INFO     | current chi2=2.5895241545204692 (change=40.98610400917047 %)
[2025-04-17 08:57:05] 2025-04-17 12:56:48,417 | INFO     | sum of square deviations: 17559551243.372307
[2025-04-17 08:57:05] 2025-04-17 12:56:48,420 | INFO     | sum of deviations: 3460681545.7734947
[2025-04-17 08:57:05] 2025-04-17 12:56:48,420 | INFO     | mean x: 1744882863.9348958
[2025-04-17 08:57:05] 2025-04-17 12:56:48,421 | INFO     | mean y: 2441275.7109375
[2025-04-17 08:57:05] 2025-04-17 12:56:48,421 | INFO     | -- intersect: -341444729.2936077
[2025-04-17 08:57:05] 2025-04-17 12:56:48,421 | INFO     | intersect: -341444729.2936077
[2025-04-17 08:57:05] 2025-04-17 12:56:48,421 | INFO     | chi2: 1.2185953436275438
[2025-04-17 08:57:05] 2025-04-17 12:56:48,421 | INFO     | current chi2=1.2185953436275438 (change=52.94134092164108 %)
[2025-04-17 08:57:05] 2025-04-17 12:56:48,422 | INFO     | sum of square deviations: 16882304504.337692
[2025-04-17 08:57:05] 2025-04-17 12:56:48,426 | INFO     | sum of deviations: -31866847051.817924
[2025-04-17 08:57:05] 2025-04-17 12:56:48,426 | INFO     | mean x: 1744883016.4670184
[2025-04-17 08:57:05] 2025-04-17 12:56:48,426 | INFO     | mean y: 2449219.1345646437
[2025-04-17 08:57:05] 2025-04-17 12:56:48,426 | INFO     | -- intersect: 3296070667.248029
[2025-04-17 08:57:05] 2025-04-17 12:56:48,426 | INFO     | intersect: 3296070667.248029
[2025-04-17 08:57:05] 2025-04-17 12:56:48,427 | INFO     | chi2: 0.8873319863498765
[2025-04-17 08:57:05] 2025-04-17 12:56:48,427 | INFO     | current chi2=0.8873319863498765 (change=27.18403274802894 %)
[2025-04-17 08:57:05] 2025-04-17 12:56:48,427 | INFO     | sum of square deviations: 16222616140.975897
[2025-04-17 08:57:05] 2025-04-17 12:56:48,431 | INFO     | sum of deviations: -50503932109.40906
[2025-04-17 08:57:05] 2025-04-17 12:56:48,431 | INFO     | mean x: 1744883169.0080214
[2025-04-17 08:57:05] 2025-04-17 12:56:48,431 | INFO     | mean y: 2453528.1363636362
[2025-04-17 08:57:05] 2025-04-17 12:56:48,431 | INFO     | -- intersect: 5434589771.799616
[2025-04-17 08:57:05] 2025-04-17 12:56:48,431 | INFO     | intersect: 5434589771.799616
[2025-04-17 08:57:05] 2025-04-17 12:56:48,432 | INFO     | chi2: 0.7893413991999368
[2025-04-17 08:57:05] 2025-04-17 12:56:48,432 | INFO     | current chi2=0.7893413991999368 (change=11.043283535064838 %)
[2025-04-17 08:57:05] 2025-04-17 12:56:48,432 | INFO     | left removable region: 50
[2025-04-17 08:57:05] 2025-04-17 12:56:48,433 | INFO     | sum of square deviations: 12513644724.968
[2025-04-17 08:57:05] 2025-04-17 12:56:48,436 | INFO     | sum of deviations: -3511201265.7609444
[2025-04-17 08:57:05] 2025-04-17 12:56:48,436 | INFO     | mean x: 1744883748.6180758
[2025-04-17 08:57:05] 2025-04-17 12:56:48,436 | INFO     | mean y: 2453013.574344023
[2025-04-17 08:57:05] 2025-04-17 12:56:48,436 | INFO     | -- intersect: 492049622.82834023
[2025-04-17 08:57:05] 2025-04-17 12:56:48,436 | INFO     | intersect: 492049622.82834023
[2025-04-17 08:57:05] 2025-04-17 12:56:48,437 | INFO     | chi2: 0.0605242963282474
[2025-04-17 08:57:05] 2025-04-17 12:56:48,437 | INFO     | -- intersect: 492049622.82834023
[2025-04-17 08:57:05] 2025-04-17 12:56:48,437 | INFO     | current memory leak: -0.28 B/s (using 343 data points, chi2=0.06)
[2025-04-17 08:57:05] 2025-04-17 12:56:48,438 | INFO     | ..............................
[2025-04-17 08:57:05] 2025-04-17 12:56:48,438 | INFO     | . Timing measurements:
[2025-04-17 08:57:05] 2025-04-17 12:56:48,438 | INFO     | . get job = 0 s
[2025-04-17 08:57:05] 2025-04-17 12:56:48,438 | INFO     | . initial setup = 5 s
[2025-04-17 08:57:05] 2025-04-17 12:56:48,438 | INFO     | . payload setup = 43 s
[2025-04-17 08:57:05] 2025-04-17 12:56:48,438 | INFO     | . stage-in = 1 s
[2025-04-17 08:57:05] 2025-04-17 12:56:48,438 | INFO     | . payload execution = 24329 s
[2025-04-17 08:57:05] 2025-04-17 12:56:48,439 | INFO     | . stage-out = 4 s
[2025-04-17 08:57:05] 2025-04-17 12:56:48,439 | INFO     | . log creation = 0 s
[2025-04-17 08:57:05] 2025-04-17 12:56:48,439 | INFO     | ..............................
[2025-04-17 08:57:05] 2025-04-17 12:56:48,594 | INFO     | 
[2025-04-17 08:57:05] 2025-04-17 12:56:48,594 | INFO     | job summary report
[2025-04-17 08:57:05] 2025-04-17 12:56:48,594 | INFO     | --------------------------------------------------
[2025-04-17 08:57:05] 2025-04-17 12:56:48,594 | INFO     | PanDA job id: 6604643107
[2025-04-17 08:57:05] 2025-04-17 12:56:48,594 | INFO     | task id: 44075483
[2025-04-17 08:57:05] 2025-04-17 12:56:48,594 | INFO     | errors: (none)
[2025-04-17 08:57:05] 2025-04-17 12:56:48,594 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 08:57:05] 2025-04-17 12:56:48,595 | INFO     | pilot state: finished 
[2025-04-17 08:57:05] 2025-04-17 12:56:48,595 | INFO     | transexitcode: 0
[2025-04-17 08:57:05] 2025-04-17 12:56:48,595 | INFO     | exeerrorcode: 0
[2025-04-17 08:57:05] 2025-04-17 12:56:48,595 | INFO     | exeerrordiag: 
[2025-04-17 08:57:05] 2025-04-17 12:56:48,595 | INFO     | exitcode: 0
[2025-04-17 08:57:05] 2025-04-17 12:56:48,595 | INFO     | exitmsg: OK
[2025-04-17 08:57:05] 2025-04-17 12:56:48,595 | INFO     | cpuconsumptiontime: 53200 s
[2025-04-17 08:57:05] 2025-04-17 12:56:48,595 | INFO     | nevents: 400
[2025-04-17 08:57:05] 2025-04-17 12:56:48,596 | INFO     | neventsw: 0
[2025-04-17 08:57:05] 2025-04-17 12:56:48,596 | INFO     | pid: 3947294
[2025-04-17 08:57:05] 2025-04-17 12:56:48,596 | INFO     | pgrp: 3947294
[2025-04-17 08:57:05] 2025-04-17 12:56:48,596 | INFO     | corecount: 10
[2025-04-17 08:57:05] 2025-04-17 12:56:48,596 | INFO     | event service: False
[2025-04-17 08:57:05] 2025-04-17 12:56:48,596 | INFO     | sizes: {0: 2416537, 1: 2417222, 3: 2417222, 4: 2417421, 5: 2417449, 16: 2417505, 28: 2417661, 39: 2417689, 52: 2417923, 63: 2417951, 24378: 2452338, 24379: 2452617
[2025-04-17 08:57:05] 2025-04-17 12:56:48,596 | INFO     | --------------------------------------------------
[2025-04-17 08:57:05] 2025-04-17 12:56:48,596 | INFO     | 
[2025-04-17 08:57:05] 2025-04-17 12:56:48,597 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-04-17 08:57:05] 2025-04-17 12:56:48,801 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,802 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,802 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,802 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,802 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,802 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,803 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 08:57:05] 2025-04-17 12:56:48,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,804 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 08:57:05] 2025-04-17 12:56:48,804 | INFO     | job 6604643107 has completed (purged errors)
[2025-04-17 08:57:05] 2025-04-17 12:56:48,804 | INFO     | overall cleanup function is called
[2025-04-17 08:57:05] 2025-04-17 12:56:49,869 | INFO     | --- collectZombieJob: --- 10, [3947294]
[2025-04-17 08:57:05] 2025-04-17 12:56:49,869 | INFO     | zombie collector waiting for pid 3947294
[2025-04-17 08:57:05] 2025-04-17 12:56:49,870 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 08:57:05] 2025-04-17 12:56:49,870 | INFO     | collected zombie processes
[2025-04-17 08:57:05] 2025-04-17 12:56:49,870 | INFO     | will attempt to kill all subprocesses of pid=3947294
[2025-04-17 08:57:05] 2025-04-17 12:56:51,130 | INFO     | process IDs to be killed: [3947294] (in reverse order)
[2025-04-17 08:57:05] 2025-04-17 12:56:51,317 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 08:57:05] 2025-04-17 12:56:51,318 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 08:57:05] 2025-04-17 12:56:51,401 | INFO     | did not find any defunct processes belonging to 3947294
[2025-04-17 08:57:05] 2025-04-17 12:56:51,504 | INFO     | did not find any defunct processes belonging to 3947294
[2025-04-17 08:57:05] 2025-04-17 12:56:51,505 | INFO     | ready for new job
[2025-04-17 08:57:05] 2025-04-17 12:56:51,505 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 08:57:05] 2025-04-17 12:56:51,566 | INFO     | **************************************
[2025-04-17 08:57:05] 2025-04-17 12:56:51,566 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 08:57:05] 2025-04-17 12:56:51,566 | INFO     | **************************************
[2025-04-17 08:57:05] 2025-04-17 12:56:51,566 | INFO     | 
[2025-04-17 08:57:05] 2025-04-17 12:56:51,598 | INFO     | architecture information:
[2025-04-17 08:57:05] 2025-04-17 12:56:51,617 | INFO     | executing command: cat /etc/os-release
[2025-04-17 08:57:05] 2025-04-17 12:56:51,873 | INFO     | cat /etc/os-release:
[2025-04-17 08:57:05] NAME="CentOS Linux"
[2025-04-17 08:57:05] VERSION="7 (Core)"
[2025-04-17 08:57:05] ID="centos"
[2025-04-17 08:57:05] ID_LIKE="rhel fedora"
[2025-04-17 08:57:05] VERSION_ID="7"
[2025-04-17 08:57:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 08:57:05] ANSI_COLOR="0;31"
[2025-04-17 08:57:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 08:57:05] HOME_URL="https://www.centos.org/"
[2025-04-17 08:57:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 08:57:05] 
[2025-04-17 08:57:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 08:57:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 08:57:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 08:57:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 08:57:05] 
[2025-04-17 08:57:05] 2025-04-17 12:56:51,874 | INFO     | **************************************
[2025-04-17 08:57:05] 2025-04-17 12:56:52,380 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-04-17 08:57:05] 2025-04-17 12:56:52,524 | INFO     | sufficient remaining disk space (75461820416 B)
[2025-04-17 08:57:05] 2025-04-17 12:56:52,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 08:57:05] 2025-04-17 12:56:52,524 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 08:57:05] 2025-04-17 12:56:52,524 | INFO     | update_server=False
[2025-04-17 08:57:05] 2025-04-17 12:56:52,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 08:57:05] 2025-04-17 12:56:52,543 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 08:57:05] 2025-04-17 12:56:52,544 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 08:57:05] 2025-04-17 12:56:52,544 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 08:57:05] 2025-04-17 12:56:52,544 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 08:57:05] 2025-04-17 12:56:52,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 08:57:05] 2025-04-17 12:56:52,590 | INFO     | aborting loop
[2025-04-17 08:57:05] 2025-04-17 12:56:53,122 | INFO     | all data control threads have been joined
[2025-04-17 08:57:05] 2025-04-17 12:56:53,385 | INFO     | all job control threads have been joined
[2025-04-17 08:57:05] 2025-04-17 12:56:53,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 08:57:05] 2025-04-17 12:56:53,540 | INFO     | [job] retrieve thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:53,558 | INFO     | [payload] validate_post thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:53,609 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 08:57:05] 2025-04-17 12:56:53,610 | INFO     | [job] job monitor thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:53,628 | INFO     | all payload control threads have been joined
[2025-04-17 08:57:05] 2025-04-17 12:56:53,678 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:53,800 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:53,808 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:54,091 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:54,128 | INFO     | [data] control thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:54,402 | INFO     | [job] control thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:54,570 | INFO     | [job] validate thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:54,615 | INFO     | [job] queue monitor thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:54,646 | INFO     | [payload] control thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:54,776 | INFO     | [data] copytool_in thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:54,884 | INFO     | [payload] failed_post thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:55,545 | INFO     | [data] copytool_out thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:55,554 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 08:57:05] 2025-04-17 12:56:59,564 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 08:57:05] 2025-04-17 12:56:59,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139638130419520)>', '<ExcThread(monitor, started 139637473392384)>']
[2025-04-17 08:57:05] 2025-04-17 12:57:00,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 08:57:05] 2025-04-17 12:57:00,593 | INFO     | [monitor] control thread has ended
[2025-04-17 08:57:05] 2025-04-17 12:57:04,671 | INFO     | all workflow threads have been joined
[2025-04-17 08:57:05] 2025-04-17 12:57:04,671 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 08:57:05] 2025-04-17 12:57:04,681 | INFO     | traces error code: 0
[2025-04-17 08:57:05] 2025-04-17 12:57:04,682 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 08:57:05] 2025-04-17 12:57:05,185 [wrapper] ==== pilot stdout END ====
[2025-04-17 08:57:05] 2025-04-17 12:57:05,195 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 08:57:05] 2025-04-17 12:57:05,198 [wrapper] pilotpid: 3928545
[2025-04-17 08:57:05] 2025-04-17 12:57:05,230 [wrapper] Pilot exit status: 0
[2025-04-17 08:57:05] 2025-04-17 12:57:05,315 [wrapper] pandaids: 6604643107
[2025-04-17 08:57:05] 2025-04-17 12:57:05,428 [wrapper] cleanup supervisor_pilot 1589225 3928546
[2025-04-17 08:57:05] 2025-04-17 12:57:05,432 [wrapper] Test setup, not cleaning
[2025-04-17 08:57:05] 2025-04-17 12:57:05,438 [wrapper] apfmon messages muted
[2025-04-17 08:57:05] 2025-04-17 12:57:05,441 [wrapper] ==== wrapper stdout END ====
[2025-04-17 08:57:05] 2025-04-17 12:57:05,447 [wrapper] ==== wrapper stderr END ====
[2025-04-17 08:57:05]  *** Error codes and diagnostics ***
[2025-04-17 08:57:05]     "exeErrorCode": 0,
[2025-04-17 08:57:05]     "exeErrorDiag": "",
[2025-04-17 08:57:05]     "pilotErrorCode": 0,
[2025-04-17 08:57:05]     "pilotErrorDiag": "",
[2025-04-17 08:57:05]  *** Listing of results directory ***
[2025-04-17 08:57:05] total 422728
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas      5111 Apr 16 18:48 queuedata.json
[2025-04-17 08:57:05] -rwx------. 1 boincer umatlas     37140 Apr 16 18:49 runpilot2-wrapper.sh
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas    495897 Apr 16 18:49 pilot3.tar.gz
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas       100 Apr 17 02:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 08:57:05] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 17 02:06 run_atlas
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas       105 Apr 17 02:06 job.xml
[2025-04-17 08:57:05] -rw-r--r--. 2 boincer umatlas 225405170 Apr 17 02:06 EVNT.44075481._001830.pool.root.1
[2025-04-17 08:57:05] -rw-r--r--. 2 boincer umatlas     17569 Apr 17 02:06 start_atlas.sh
[2025-04-17 08:57:05] drwxrwx--x. 2 boincer umatlas      4096 Apr 17 02:06 shared
[2025-04-17 08:57:05] -rw-r--r--. 2 boincer umatlas    508883 Apr 17 02:06 input.tar.gz
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas         0 Apr 17 02:06 boinc_lockfile
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas      2578 Apr 17 02:07 pandaJob.out
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas       467 Apr 17 02:07 setup.sh.local
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas    986416 Apr 17 02:08 agis_schedconf.cvmfs.json
[2025-04-17 08:57:05] drwx------. 4 boincer umatlas      4096 Apr 17 02:08 pilot3
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas      6673 Apr 17 08:47 init_data.xml
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas 199081189 Apr 17 08:54 HITS.44075483._046798.pool.root.1
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas       531 Apr 17 08:55 boinc_task_state.xml
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas      1049 Apr 17 08:56 memory_monitor_summary.json
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas   1618536 Apr 17 08:56 agis_ddmendpoints.agis.ALL.json
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas    491342 Apr 17 08:56 log.44075483._046798.job.log.tgz.1
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas        95 Apr 17 08:56 pilot_heartbeat.json
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas      7731 Apr 17 08:56 heartbeat.json
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas      8192 Apr 17 08:57 boinc_mmap_file
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas        28 Apr 17 08:57 wrapper_checkpoint.txt
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas      4476 Apr 17 08:57 pilotlog.txt
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas   1774051 Apr 17 08:57 log.44075483._046798.job.log.1
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas       357 Apr 17 08:57 output.list
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas       620 Apr 17 08:57 runtime_log
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas   2283520 Apr 17 08:57 result.tar.gz
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas     11406 Apr 17 08:57 runtime_log.err
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas       659 Apr 17 08:57 3P4KDmzkQP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmjMbLDmhyIqzm.diag
[2025-04-17 08:57:05] -rw-r--r--. 1 boincer umatlas     20914 Apr 17 08:57 stderr.txt
[2025-04-17 08:57:05] HITS file was successfully produced:
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas 199081189 Apr 17 08:54 shared/HITS.pool.root.1
[2025-04-17 08:57:05]  *** Contents of shared directory: ***
[2025-04-17 08:57:05] total 417296
[2025-04-17 08:57:05] -rw-r--r--. 2 boincer umatlas 225405170 Apr 17 02:06 ATLAS.root_0
[2025-04-17 08:57:05] -rw-r--r--. 2 boincer umatlas     17569 Apr 17 02:06 start_atlas.sh
[2025-04-17 08:57:05] -rw-r--r--. 2 boincer umatlas    508883 Apr 17 02:06 input.tar.gz
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas 199081189 Apr 17 08:54 HITS.pool.root.1
[2025-04-17 08:57:05] -rw-------. 1 boincer umatlas   2283520 Apr 17 08:57 result.tar.gz
08:57:28 (3912973): run_atlas exited; CPU time 54091.058318
08:57:28 (3912973): called boinc_finish(0)

</stderr_txt>
]]>

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