Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 19:37:02 (244): Detected: vboxwrapper 26206
2025-04-17 19:37:02 (244): Detected: BOINC client v8.0.2
2025-04-17 19:37:02 (244): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-17 19:37:02 (244): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 19:37:03 (244): Create VM. (boinc_f492bfcc06025a74, slot#0)
2025-04-17 19:37:03 (244): Setting Memory Size for VM. (4400MB)
2025-04-17 19:37:04 (244): Setting CPU Count for VM. (4)
2025-04-17 19:37:04 (244): Setting Chipset Options for VM.
2025-04-17 19:37:04 (244): Setting Graphics Controller Options for VM.
2025-04-17 19:37:04 (244): Setting Boot Options for VM.
2025-04-17 19:37:05 (244): Setting Network Configuration for NAT.
2025-04-17 19:37:05 (244): Enabling VM Network Access.
2025-04-17 19:37:05 (244): Disabling USB Support for VM.
2025-04-17 19:37:06 (244): Disabling COM Port Support for VM.
2025-04-17 19:37:06 (244): Disabling LPT Port Support for VM.
2025-04-17 19:37:06 (244): Disabling Audio Support for VM.
2025-04-17 19:37:06 (244): Disabling Clipboard Support for VM.
2025-04-17 19:37:07 (244): Disabling Drag and Drop Support for VM.
2025-04-17 19:37:07 (244): Adding storage controller(s) to VM.
2025-04-17 19:37:07 (244): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 19:37:10 (244): Adding VirtualBox Guest Additions to VM.
2025-04-17 19:37:10 (244): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 19:37:11 (244): forwarding host port 59454 to guest port 80
2025-04-17 19:37:11 (244): Enabling remote desktop for VM.
2025-04-17 19:37:11 (244): Required extension pack not installed, remote desktop not enabled.
2025-04-17 19:37:11 (244): Enabling shared directory for VM.
2025-04-17 19:37:12 (244): Starting VM using VBoxManage interface. (boinc_f492bfcc06025a74, slot#0)
2025-04-17 19:37:17 (244): Successfully started VM. (PID = '11180')
2025-04-17 19:37:17 (244): Reporting VM Process ID to BOINC.
2025-04-17 19:37:17 (244): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-17 19:37:17 (244): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 19:37:17 (244): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 19:37:17 (244): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 19:37:17 (244): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 19:37:17 (244): Detected: Web Application Enabled (http://localhost:59454)
2025-04-17 19:37:17 (244): Preference change detected
2025-04-17 19:37:17 (244): Setting CPU throttle for VM. (100%)
2025-04-17 19:37:17 (244): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 19:37:19 (244): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 19:37:19 (244): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 19:37:22 (244): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 19:37:22 (244): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 19:37:22 (244): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 19:37:30 (244): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 19:37:30 (244): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 19:37:39 (244): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 19:37:39 (244): Guest Log: 00:00:00.000200 main     Log opened 2025-04-17T19:37:38.209475000Z
2025-04-17 19:37:39 (244): Guest Log: 00:00:00.000324 main     OS Product: Linux
2025-04-17 19:37:39 (244): Guest Log: 00:00:00.000366 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 19:37:39 (244): Guest Log: 00:00:00.000403 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 19:37:39 (244): Guest Log: 00:00:00.000483 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 19:37:39 (244): Guest Log: 00:00:00.000485 main     Process ID: 1305
2025-04-17 19:37:39 (244): Guest Log: 00:00:00.000486 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 19:37:39 (244): Guest Log: 00:00:00.002107 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 19:37:39 (244): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 19:37:39 (244): Guest Log: [INFO] Mounting shared directory
2025-04-17 19:37:39 (244): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 19:37:46 (244): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 19:37:46 (244): Guest Log: [INFO] Detected branch: prod
2025-04-17 19:37:46 (244): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 19:37:46 (244): Guest Log: Copying input files
2025-04-17 19:37:48 (244): Guest Log: Copied input files into RunAtlas.
2025-04-17 19:37:48 (244): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-17 19:37:48 (244): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-17 19:37:48 (244): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-17 19:37:48 (244): Guest Log: Further information can be found at the LHC@home message board.
2025-04-17 19:37:49 (244): Guest Log: 00:00:10.004588 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 722 873 000ns (GuestNow=1 744 911 469 490 416 000 ns GuestLast=1 744 918 658 213 289 000 ns fSetTimeLastLoop=true )
2025-04-17 19:37:57 (244): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 19:37:58 (244): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 19:37:58 (244): Guest Log: 2.6.3.0 1582 0 30120 144973 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-17 19:37:59 (244): Guest Log: copied the webapp to /var/www
2025-04-17 19:37:59 (244): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-17 19:37:59 (244): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-17 19:37:59 (244): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 19:37:59 (244): Guest Log:  *** Starting ATLAS job. (PandaID=6604309165 taskID=44075483) ***
2025-04-17 21:21:48 (244): Status Report: Elapsed Time: '6000.864769'
2025-04-17 21:21:48 (244): Status Report: CPU Time: '19808.156250'
2025-04-17 23:07:59 (244): Status Report: Elapsed Time: '12000.884279'
2025-04-17 23:07:59 (244): Status Report: CPU Time: '45042.109375'
2025-04-18 00:54:00 (244): Status Report: Elapsed Time: '18001.751337'
2025-04-18 00:54:00 (244): Status Report: CPU Time: '70262.562500'
2025-04-18 00:58:55 (244): Guest Log:  *** Job finished ***
2025-04-18 00:58:55 (244): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:43,921 | INFO     | [job] create_data_payload thread has finished
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:44,920 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:48,923 | INFO     | [data] queue_monitor thread has finished
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:49,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845328791360)>', '<ExcThread(monitor, started 139844571346688)>']
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:49,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:49,481 | INFO     | [monitor] control thread has ended
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,041 | INFO     | all workflow threads have been joined
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,041 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,042 | INFO     | traces error code: 0
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,189 [wrapper] ==== pilot stdout END ====
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,194 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,199 [wrapper] pilotpid: 5922
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,204 [wrapper] Pilot exit status: 0
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,570 [wrapper] pandaids: 6604309165
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,637 [wrapper] cleanup supervisor_pilot 21351 5923
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,644 [wrapper] Test setup, not cleaning
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,649 [wrapper] apfmon messages muted
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,654 [wrapper] ==== wrapper stdout END ====
2025-04-18 00:58:55 (244): Guest Log: 2025-04-17 22:58:54,660 [wrapper] ==== wrapper stderr END ====
2025-04-18 00:58:55 (244): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 00:58:55 (244): Guest Log:     "exeErrorCode": 0,
2025-04-18 00:58:55 (244): Guest Log:     "exeErrorDiag": "",
2025-04-18 00:58:55 (244): Guest Log:     "pilotErrorCode": 0,
2025-04-18 00:58:55 (244): Guest Log:     "pilotErrorDiag": "",
2025-04-18 00:58:55 (244): Guest Log:  *** Listing of results directory ***
2025-04-18 00:58:55 (244): Guest Log: total 191412
2025-04-18 00:58:55 (244): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 16 18:41 pilot3.tar.gz
2025-04-18 00:58:55 (244): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 16 18:43 queuedata.json
2025-04-18 00:58:55 (244): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 16 18:44 runpilot2-wrapper.sh
2025-04-18 00:58:55 (244): Guest Log: -rwxr-xr-x. 1 atlas atlas     13234 Apr 17 17:37 init_data.xml
2025-04-18 00:58:55 (244): Guest Log: -rwxr-xr-x. 1 atlas atlas    508890 Apr 17 17:37 input.tar.gz
2025-04-18 00:58:55 (244): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 17:37 start_atlas.sh
2025-04-18 00:58:55 (244): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 17:37 EVNT.44075481._001721.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 00:58:55 (244): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 17 17:37 pandaJob.out
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 17:38 setup.sh.local
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas    990266 Apr 17 17:39 agis_schedconf.cvmfs.json
2025-04-18 00:58:55 (244): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 17:39 pilot3
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas 188275807 Apr 17 22:56 HITS.44075483._043992.pool.root.1
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas      1034 Apr 17 22:57 memory_monitor_summary.json
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 17 22:57 agis_ddmendpoints.agis.ALL.json
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas    381482 Apr 17 22:57 log.44075483._043992.job.log.tgz.1
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas        95 Apr 17 22:57 pilot_heartbeat.json
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas      7689 Apr 17 22:58 heartbeat.json
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 17 22:58 pilotlog.txt
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas   1584835 Apr 17 22:58 log.44075483._043992.job.log.1
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 22:58 output.list
2025-04-18 00:58:55 (244): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 22:58 runtime_log
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas   1986560 Apr 17 22:58 result.tar.gz
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas       654 Apr 17 22:58 wCWNDmDvMP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmxtaLDmcnzz1m.diag
2025-04-18 00:58:55 (244): Guest Log: -rw-r--r--. 1 atlas atlas     10920 Apr 17 22:58 runtime_log.err
2025-04-18 00:58:55 (244): Guest Log: Looking for outputfile HITS.44075483._043992.pool.root.1
2025-04-18 00:58:55 (244): Guest Log: HITS file was successfully produced
2025-04-18 00:58:55 (244): Guest Log: -rw-------. 1 atlas atlas 188275807 Apr 17 22:56 /home/atlas/RunAtlas/HITS.44075483._043992.pool.root.1
2025-04-18 00:58:56 (244): Guest Log: Successfully finished the ATLAS job!
2025-04-18 00:58:56 (244): Guest Log: Copying the results back to the shared directory!
2025-04-18 00:58:56 (244): Guest Log:  *** Contents of shared directory: ***
2025-04-18 00:58:56 (244): Guest Log: total 406276
2025-04-18 00:58:56 (244): Guest Log: -rwxrwxrwx. 1 root root 225212386 Apr 17 17:37 ATLAS.root_0
2025-04-18 00:58:56 (244): Guest Log: -rwxrwxrwx. 1 root root 188275807 Apr 17 22:58 HITS.pool.root.1
2025-04-18 00:58:56 (244): Guest Log: -rwxrwxrwx. 1 root root     13234 Apr 17 17:37 init_data.xml
2025-04-18 00:58:56 (244): Guest Log: -rwxrwxrwx. 1 root root    508890 Apr 17 01:29 input.tar.gz
2025-04-18 00:58:56 (244): Guest Log: -rwxrwxrwx. 1 root root   1986560 Apr 17 22:58 result.tar.gz
2025-04-18 00:58:56 (244): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 17 01:29 start_atlas.sh
2025-04-18 00:58:56 (244): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 00:58:56 (244): VM Completion File Detected.
2025-04-18 00:58:56 (244): Powering off VM.
2025-04-18 00:58:57 (244): Successfully stopped VM.
2025-04-18 00:58:57 (244): Deregistering VM. (boinc_f492bfcc06025a74, slot#0)
2025-04-18 00:58:57 (244): Removing network bandwidth throttle group from VM.
2025-04-18 00:58:57 (244): Removing VM from VirtualBox.
00:59:02 (244): called boinc_finish(0)

</stderr_txt>
]]>

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