Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:06:43 (3043614): wrapper (7.7.26015): starting
16:06:43 (3043614): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 16:06:43] Arguments: --nthreads 12
[2025-04-17 16:06:43] Threads: 12
[2025-04-17 16:06:43] Checking for CVMFS
[2025-04-17 16:06:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 16:06:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 16:06:44] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 16:06:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 16:06:44] 2.11.5.0 2644 20528 217868 144981 1 297 40011115 45568000 17252 130560 0 170127215 99.685 191295321 27104 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-17 16:06:44] CVMFS is ok
[2025-04-17 16:06:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 16:06:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 16:06:44] Further information can be found at the LHC@home message board.
[2025-04-17 16:06:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 16:06:44] Checking for apptainer binary...
[2025-04-17 16:06:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 16:06:44] Running /usr/bin/apptainer --version
[2025-04-17 16:06:44] apptainer version 1.3.5-1.el9
[2025-04-17 16:06:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 16:06:45] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0036.triumf.lcg
[2025-04-17 16:06:45] apptainer works
[2025-04-17 16:06:45] Set ATHENA_PROC_NUMBER=12
[2025-04-17 16:06:45] Set ATHENA_CORE_NUMBER=12
[2025-04-17 16:06:45] Starting ATLAS job with PandaID=6604539358
[2025-04-17 16:06:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-19 03:42:27]  *** The last 200 lines of the pilot log: ***
[2025-04-19 03:42:27] 2025-04-19 10:41:52,485 | INFO     | PID=3059014 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 03:42:27] 2025-04-19 10:41:52,485 | INFO     | .. there are 14 such processes running
[2025-04-19 03:42:27] 2025-04-19 10:41:54,685 | INFO     | monitor loop #7807: job 0:6604539358 is in state 'finished'
[2025-04-19 03:42:27] 2025-04-19 10:41:54,685 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 03:42:27] 2025-04-19 10:41:57,190 | INFO     | monitor loop #7808: job 0:6604539358 is in state 'finished'
[2025-04-19 03:42:27] 2025-04-19 10:41:57,190 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 03:42:27] 2025-04-19 10:41:59,695 | INFO     | monitor loop #7809: job 0:6604539358 is in state 'finished'
[2025-04-19 03:42:27] 2025-04-19 10:41:59,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 03:42:27] 2025-04-19 10:42:02,200 | INFO     | monitor loop #7810: job 0:6604539358 is in state 'finished'
[2025-04-19 03:42:27] 2025-04-19 10:42:02,200 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 03:42:27] 2025-04-19 10:42:04,705 | INFO     | monitor loop #7811: job 0:6604539358 is in state 'finished'
[2025-04-19 03:42:27] 2025-04-19 10:42:04,705 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 03:42:27] 2025-04-19 10:42:07,210 | INFO     | monitor loop #7812: job 0:6604539358 is in state 'finished'
[2025-04-19 03:42:27] 2025-04-19 10:42:07,210 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 03:42:27] 2025-04-19 10:42:09,715 | INFO     | monitor loop #7813: job 0:6604539358 is in state 'finished'
[2025-04-19 03:42:27] 2025-04-19 10:42:09,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-19 03:42:27] 2025-04-19 10:42:11,411 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-19 03:42:27] 2025-04-19 10:42:11,412 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6604539358/memory_monitor_summary.json (trf name=prmon)
[2025-04-19 03:42:27] 2025-04-19 10:42:11,412 | INFO     | extracted standard info from prmon json
[2025-04-19 03:42:27] 2025-04-19 10:42:11,412 | INFO     | extracted standard memory fields from prmon json
[2025-04-19 03:42:27] 2025-04-19 10:42:11,412 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-19 03:42:27] 2025-04-19 10:42:11,431 | INFO     | fitting pss+swap vs Time
[2025-04-19 03:42:27] 2025-04-19 10:42:11,433 | INFO     | sum of square deviations: 2863788842123.2207
[2025-04-19 03:42:27] 2025-04-19 10:42:11,483 | INFO     | sum of deviations: 16385304319862.922
[2025-04-19 03:42:27] 2025-04-19 10:42:11,483 | INFO     | mean x: 1744995320.0424213
[2025-04-19 03:42:27] 2025-04-19 10:42:11,483 | INFO     | mean y: 4123639.8889418496
[2025-04-19 03:42:27] 2025-04-19 10:42:11,483 | INFO     | -- intersect: -9979950232.831812
[2025-04-19 03:42:27] 2025-04-19 10:42:11,483 | INFO     | intersect: -9979950232.831812
[2025-04-19 03:42:27] 2025-04-19 10:42:11,485 | INFO     | chi2: 32.726339792158456
[2025-04-19 03:42:27] 2025-04-19 10:42:11,486 | INFO     | sum of square deviations: 2843368182306.767
[2025-04-19 03:42:27] 2025-04-19 10:42:11,540 | INFO     | sum of deviations: 17433081171820.955
[2025-04-19 03:42:27] 2025-04-19 10:42:11,540 | INFO     | mean x: 1744995167.5556617
[2025-04-19 03:42:27] 2025-04-19 10:42:11,540 | INFO     | mean y: 4131464.11610129
[2025-04-19 03:42:27] 2025-04-19 10:42:11,540 | INFO     | -- intersect: -10694673773.18296
[2025-04-19 03:42:27] 2025-04-19 10:42:11,540 | INFO     | intersect: -10694673773.18296
[2025-04-19 03:42:27] 2025-04-19 10:42:11,542 | INFO     | chi2: 29.436072534064365
[2025-04-19 03:42:27] 2025-04-19 10:42:11,542 | INFO     | current chi2=29.436072534064365 (change=10.05388099918974 %)
[2025-04-19 03:42:27] 2025-04-19 10:42:11,542 | INFO     | right removable region: 2092
[2025-04-19 03:42:27] 2025-04-19 10:42:11,543 | INFO     | sum of square deviations: 2843361089226.7656
[2025-04-19 03:42:27] 2025-04-19 10:42:11,597 | INFO     | sum of deviations: 15172174953334.79
[2025-04-19 03:42:27] 2025-04-19 10:42:11,598 | INFO     | mean x: 1744995472.5556617
[2025-04-19 03:42:27] 2025-04-19 10:42:11,598 | INFO     | mean y: 4132696.5470616342
[2025-04-19 03:42:27] 2025-04-19 10:42:11,598 | INFO     | -- intersect: -9307163256.226713
[2025-04-19 03:42:27] 2025-04-19 10:42:11,598 | INFO     | intersect: -9307163256.226713
[2025-04-19 03:42:27] 2025-04-19 10:42:11,599 | INFO     | chi2: 28.33101379794573
[2025-04-19 03:42:27] 2025-04-19 10:42:11,599 | INFO     | current chi2=28.33101379794573 (change=13.430545615938048 %)
[2025-04-19 03:42:27] 2025-04-19 10:42:11,599 | INFO     | left removable region: 10
[2025-04-19 03:42:27] 2025-04-19 10:42:11,601 | INFO     | sum of square deviations: 2798770891431.951
[2025-04-19 03:42:27] 2025-04-19 10:42:11,650 | INFO     | sum of deviations: 15366900925468.996
[2025-04-19 03:42:27] 2025-04-19 10:42:11,651 | INFO     | mean x: 1744995442.0850143
[2025-04-19 03:42:27] 2025-04-19 10:42:11,651 | INFO     | mean y: 4150310.384245917
[2025-04-19 03:42:27] 2025-04-19 10:42:11,651 | INFO     | -- intersect: -9576902628.249035
[2025-04-19 03:42:27] 2025-04-19 10:42:11,652 | INFO     | intersect: -9576902628.249035
[2025-04-19 03:42:27] 2025-04-19 10:42:11,653 | INFO     | chi2: 20.962058589405576
[2025-04-19 03:42:27] 2025-04-19 10:42:11,653 | INFO     | -- intersect: -9576902628.249035
[2025-04-19 03:42:27] 2025-04-19 10:42:11,653 | INFO     | current memory leak: 5.49 B/s (using 2082 data points, chi2=20.96)
[2025-04-19 03:42:27] 2025-04-19 10:42:11,655 | INFO     | ..............................
[2025-04-19 03:42:27] 2025-04-19 10:42:11,655 | INFO     | . Timing measurements:
[2025-04-19 03:42:27] 2025-04-19 10:42:11,655 | INFO     | . get job = 0 s
[2025-04-19 03:42:27] 2025-04-19 10:42:11,655 | INFO     | . initial setup = 4 s
[2025-04-19 03:42:27] 2025-04-19 10:42:11,655 | INFO     | . payload setup = 47 s
[2025-04-19 03:42:27] 2025-04-19 10:42:11,655 | INFO     | . stage-in = 0 s
[2025-04-19 03:42:27] 2025-04-19 10:42:11,655 | INFO     | . payload execution = 127963 s
[2025-04-19 03:42:27] 2025-04-19 10:42:11,656 | INFO     | . stage-out = 9 s
[2025-04-19 03:42:27] 2025-04-19 10:42:11,656 | INFO     | . log creation = 2 s
[2025-04-19 03:42:27] 2025-04-19 10:42:11,656 | INFO     | ..............................
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | 
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | job summary report
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | --------------------------------------------------
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | PanDA job id: 6604539358
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | task id: 43926519
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | errors: (none)
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | pilot state: finished 
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | transexitcode: 0
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | exeerrorcode: 0
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | exeerrordiag: 
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | exitcode: 0
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | exitmsg: OK
[2025-04-19 03:42:27] 2025-04-19 10:42:11,811 | INFO     | cpuconsumptiontime: 292033 s
[2025-04-19 03:42:27] 2025-04-19 10:42:11,812 | INFO     | nevents: 1000
[2025-04-19 03:42:27] 2025-04-19 10:42:11,812 | INFO     | neventsw: 0
[2025-04-19 03:42:27] 2025-04-19 10:42:11,826 | INFO     | pid: 3094624
[2025-04-19 03:42:27] 2025-04-19 10:42:11,826 | INFO     | pgrp: 3094624
[2025-04-19 03:42:27] 2025-04-19 10:42:11,826 | INFO     | corecount: 12
[2025-04-19 03:42:27] 2025-04-19 10:42:11,826 | INFO     | event service: False
[2025-04-19 03:42:27] 2025-04-19 10:42:11,826 | INFO     | sizes: {0: 2427214, 12: 2427214, 22: 2427242, 23: 2427476, 33: 2427504, 128015: 2527260, 128016: 2527387, 128026: 2536430, 128046: 2536596}
[2025-04-19 03:42:27] 2025-04-19 10:42:11,826 | INFO     | --------------------------------------------------
[2025-04-19 03:42:27] 2025-04-19 10:42:11,826 | INFO     | 
[2025-04-19 03:42:27] 2025-04-19 10:42:11,826 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-19 03:42:27] 2025-04-19 10:42:12,063 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-19 03:42:27] 2025-04-19 10:42:12,064 | INFO     | job 6604539358 has completed (purged errors)
[2025-04-19 03:42:27] 2025-04-19 10:42:12,065 | INFO     | overall cleanup function is called
[2025-04-19 03:42:27] 2025-04-19 10:42:13,149 | INFO     | --- collectZombieJob: --- 10, [3094624]
[2025-04-19 03:42:27] 2025-04-19 10:42:13,149 | INFO     | zombie collector waiting for pid 3094624
[2025-04-19 03:42:27] 2025-04-19 10:42:13,149 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-19 03:42:27] 2025-04-19 10:42:13,149 | INFO     | collected zombie processes
[2025-04-19 03:42:27] 2025-04-19 10:42:13,149 | INFO     | will attempt to kill all subprocesses of pid=3094624
[2025-04-19 03:42:27] 2025-04-19 10:42:13,727 | INFO     | process IDs to be killed: [3094624] (in reverse order)
[2025-04-19 03:42:27] 2025-04-19 10:42:14,005 | WARNING  | found no corresponding commands to process id(s)
[2025-04-19 03:42:27] 2025-04-19 10:42:14,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-19 03:42:27] 2025-04-19 10:42:14,017 | INFO     | did not find any defunct processes belonging to 3094624
[2025-04-19 03:42:27] 2025-04-19 10:42:14,026 | INFO     | did not find any defunct processes belonging to 3094624
[2025-04-19 03:42:27] 2025-04-19 10:42:14,026 | INFO     | ready for new job
[2025-04-19 03:42:27] 2025-04-19 10:42:14,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-19 03:42:27] 2025-04-19 10:42:14,036 | INFO     | **************************************
[2025-04-19 03:42:27] 2025-04-19 10:42:14,036 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-19 03:42:27] 2025-04-19 10:42:14,036 | INFO     | **************************************
[2025-04-19 03:42:27] 2025-04-19 10:42:14,036 | INFO     | 
[2025-04-19 03:42:27] 2025-04-19 10:42:14,042 | INFO     | architecture information:
[2025-04-19 03:42:27] 2025-04-19 10:42:14,050 | INFO     | executing command: cat /etc/os-release
[2025-04-19 03:42:27] 2025-04-19 10:42:14,160 | INFO     | cat /etc/os-release:
[2025-04-19 03:42:27] NAME="CentOS Linux"
[2025-04-19 03:42:27] VERSION="7 (Core)"
[2025-04-19 03:42:27] ID="centos"
[2025-04-19 03:42:27] ID_LIKE="rhel fedora"
[2025-04-19 03:42:27] VERSION_ID="7"
[2025-04-19 03:42:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-19 03:42:27] ANSI_COLOR="0;31"
[2025-04-19 03:42:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-19 03:42:27] HOME_URL="https://www.centos.org/"
[2025-04-19 03:42:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-19 03:42:27] 
[2025-04-19 03:42:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-19 03:42:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-19 03:42:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-19 03:42:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-19 03:42:27] 
[2025-04-19 03:42:27] 2025-04-19 10:42:14,160 | INFO     | **************************************
[2025-04-19 03:42:27] 2025-04-19 10:42:14,664 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-19 03:42:27] 2025-04-19 10:42:14,749 | INFO     | sufficient remaining disk space (2188598312960 B)
[2025-04-19 03:42:27] 2025-04-19 10:42:14,750 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-19 03:42:27] 2025-04-19 10:42:14,750 | INFO     | current server update state: UPDATING_FINAL
[2025-04-19 03:42:27] 2025-04-19 10:42:14,750 | INFO     | update_server=False
[2025-04-19 03:42:27] 2025-04-19 10:42:14,750 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-19 03:42:27] 2025-04-19 10:42:14,777 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-19 03:42:27] 2025-04-19 10:42:15,178 | INFO     | all data control threads have been joined
[2025-04-19 03:42:27] 2025-04-19 10:42:15,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-19 03:42:27] 2025-04-19 10:42:15,583 | INFO     | PID=3059014 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-19 03:42:27] 2025-04-19 10:42:15,583 | INFO     | .. there are 14 such processes running
[2025-04-19 03:42:27] 2025-04-19 10:42:15,583 | INFO     | found 0 job(s) in 20 queues
[2025-04-19 03:42:27] 2025-04-19 10:42:15,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-19 03:42:27] 2025-04-19 10:42:15,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-19 03:42:27] 2025-04-19 10:42:15,757 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-19 03:42:27] 2025-04-19 10:42:15,757 | INFO     | aborting loop
[2025-04-19 03:42:27] 2025-04-19 10:42:15,757 | INFO     | [job] retrieve thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:16,113 | INFO     | all payload control threads have been joined
[2025-04-19 03:42:27] 2025-04-19 10:42:16,113 | INFO     | all job control threads have been joined
[2025-04-19 03:42:27] 2025-04-19 10:42:16,184 | INFO     | [data] control thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:16,284 | INFO     | [job] validate thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:16,290 | INFO     | [payload] validate_pre thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:16,389 | INFO     | [payload] validate_post thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:16,763 | INFO     | [job] job monitor thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:16,776 | INFO     | [payload] failed_post thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:16,784 | INFO     | [data] copytool_out thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:16,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-19 03:42:27] 2025-04-19 10:42:17,119 | INFO     | [job] control thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:17,119 | INFO     | [payload] control thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:17,142 | INFO     | [data] copytool_in thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:17,184 | INFO     | [payload] execute_payloads thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:17,234 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:17,234 | INFO     | [job] create_data_payload thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:17,831 | INFO     | [job] queue monitor thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:19,393 | INFO     | [data] queue_monitor thread has finished
[2025-04-19 03:42:27] 2025-04-19 10:42:20,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140022251018048)>', '<ExcThread(monitor, started 140021923284736)>']
[2025-04-19 03:42:27] 2025-04-19 10:42:21,619 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-19 03:42:27] 2025-04-19 10:42:21,619 | INFO     | [monitor] control thread has ended
[2025-04-19 03:42:27] 2025-04-19 10:42:25,765 | INFO     | all workflow threads have been joined
[2025-04-19 03:42:27] 2025-04-19 10:42:25,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-19 03:42:27] 2025-04-19 10:42:25,765 | INFO     | traces error code: 0
[2025-04-19 03:42:27] 2025-04-19 10:42:25,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-19 03:42:27] 2025-04-19 10:42:26,082 [wrapper] ==== pilot stdout END ====
[2025-04-19 03:42:27] 2025-04-19 10:42:26,119 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-19 03:42:27] 2025-04-19 10:42:26,189 [wrapper] pilotpid: 3059014
[2025-04-19 03:42:27] 2025-04-19 10:42:26,299 [wrapper] Pilot exit status: 0
[2025-04-19 03:42:27] 2025-04-19 10:42:26,762 [wrapper] pandaids: 6604539358
[2025-04-19 03:42:27] 2025-04-19 10:42:27,019 [wrapper] cleanup supervisor_pilot 2392458 3059015
[2025-04-19 03:42:27] 2025-04-19 10:42:27,022 [wrapper] Test setup, not cleaning
[2025-04-19 03:42:27] 2025-04-19 10:42:27,028 [wrapper] apfmon messages muted
[2025-04-19 03:42:27] 2025-04-19 10:42:27,033 [wrapper] ==== wrapper stdout END ====
[2025-04-19 03:42:27] 2025-04-19 10:42:27,035 [wrapper] ==== wrapper stderr END ====
[2025-04-19 03:42:27]  *** Error codes and diagnostics ***
[2025-04-19 03:42:27]     "exeErrorCode": 0,
[2025-04-19 03:42:27]     "exeErrorDiag": "",
[2025-04-19 03:42:27]     "pilotErrorCode": 0,
[2025-04-19 03:42:27]     "pilotErrorDiag": "",
[2025-04-19 03:42:27]  *** Listing of results directory ***
[2025-04-19 03:42:27] total 948988
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc    495897 Apr 16 13:35 pilot3.tar.gz
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc      5111 Apr 16 13:41 queuedata.json
[2025-04-19 03:42:27] -rwx------. 1 boinc boinc     37140 Apr 16 13:42 runpilot2-wrapper.sh
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc       100 Apr 17 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-19 03:42:27] -rwxr-xr-x. 1 boinc boinc      7986 Apr 17 16:06 run_atlas
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc       105 Apr 17 16:06 job.xml
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc      6602 Apr 17 16:06 init_data.xml
[2025-04-19 03:42:27] -rw-r--r--. 2 boinc boinc 320544376 Apr 17 16:06 EVNT.43427702._000001.pool.root.1
[2025-04-19 03:42:27] -rw-r--r--. 2 boinc boinc     17569 Apr 17 16:06 start_atlas.sh
[2025-04-19 03:42:27] drwxrwx--x. 2 boinc boinc      4096 Apr 17 16:06 shared
[2025-04-19 03:42:27] -rw-r--r--. 2 boinc boinc    509060 Apr 17 16:06 input.tar.gz
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc         0 Apr 17 16:06 boinc_lockfile
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc      2807 Apr 17 16:06 pandaJob.out
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc       424 Apr 17 16:06 setup.sh.local
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc    990266 Apr 17 16:07 agis_schedconf.cvmfs.json
[2025-04-19 03:42:27] drwx------. 4 boinc boinc      4096 Apr 17 16:07 pilot3
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc       534 Apr 19 03:04 boinc_task_state.xml
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc 621154175 Apr 19 03:41 HITS.43926519._000003.pool.root.1
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc      1062 Apr 19 03:41 memory_monitor_summary.json
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc   1618536 Apr 19 03:41 agis_ddmendpoints.agis.ALL.json
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc   2826108 Apr 19 03:41 log.43926519._000003.job.log.tgz.1
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc        95 Apr 19 03:41 pilot_heartbeat.json
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc     27609 Apr 19 03:42 heartbeat.json
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc      8192 Apr 19 03:42 boinc_mmap_file
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc        30 Apr 19 03:42 wrapper_checkpoint.txt
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc      4747 Apr 19 03:42 pilotlog.txt
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc  10257890 Apr 19 03:42 log.43926519._000003.job.log.1
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc       353 Apr 19 03:42 output.list
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc       620 Apr 19 03:42 runtime_log
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc  13117440 Apr 19 03:42 result.tar.gz
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc     11146 Apr 19 03:42 runtime_log.err
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc       669 Apr 19 03:42 GI8LDmflOP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmU52KDmoh9NPo.diag
[2025-04-19 03:42:27] -rw-r--r--. 1 boinc boinc     21814 Apr 19 03:42 stderr.txt
[2025-04-19 03:42:27] HITS file was successfully produced:
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc 621154175 Apr 19 03:41 shared/HITS.pool.root.1
[2025-04-19 03:42:27]  *** Contents of shared directory: ***
[2025-04-19 03:42:27] total 932968
[2025-04-19 03:42:27] -rw-r--r--. 2 boinc boinc 320544376 Apr 17 16:06 ATLAS.root_0
[2025-04-19 03:42:27] -rw-r--r--. 2 boinc boinc     17569 Apr 17 16:06 start_atlas.sh
[2025-04-19 03:42:27] -rw-r--r--. 2 boinc boinc    509060 Apr 17 16:06 input.tar.gz
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc 621154175 Apr 19 03:41 HITS.pool.root.1
[2025-04-19 03:42:27] -rw-------. 1 boinc boinc  13117440 Apr 19 03:42 result.tar.gz
03:42:28 (3043614): run_atlas exited; CPU time 292658.903766
03:42:28 (3043614): called boinc_finish(0)

</stderr_txt>
]]>

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