Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 17:58:35 (3888): Detected: vboxwrapper 26206
2025-04-17 17:58:35 (3888): Detected: BOINC client v8.0.4
2025-04-17 17:58:36 (3888): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-17 17:58:36 (3888): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 17:58:36 (3888): Create VM. (boinc_24a63fa815248db5, slot#0)
2025-04-17 17:58:37 (3888): Setting Memory Size for VM. (4200MB)
2025-04-17 17:58:37 (3888): Setting CPU Count for VM. (2)
2025-04-17 17:58:38 (3888): Setting Chipset Options for VM.
2025-04-17 17:58:38 (3888): Setting Graphics Controller Options for VM.
2025-04-17 17:58:38 (3888): Setting Boot Options for VM.
2025-04-17 17:58:38 (3888): Setting Network Configuration for NAT.
2025-04-17 17:58:39 (3888): Enabling VM Network Access.
2025-04-17 17:58:39 (3888): Disabling USB Support for VM.
2025-04-17 17:58:39 (3888): Disabling COM Port Support for VM.
2025-04-17 17:58:39 (3888): Disabling LPT Port Support for VM.
2025-04-17 17:58:40 (3888): Disabling Audio Support for VM.
2025-04-17 17:58:40 (3888): Disabling Clipboard Support for VM.
2025-04-17 17:58:40 (3888): Disabling Drag and Drop Support for VM.
2025-04-17 17:58:40 (3888): Adding storage controller(s) to VM.
2025-04-17 17:58:41 (3888): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 17:58:44 (3888): Adding VirtualBox Guest Additions to VM.
2025-04-17 17:58:44 (3888): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 17:58:44 (3888): forwarding host port 55129 to guest port 80
2025-04-17 17:58:44 (3888): Enabling remote desktop for VM.
2025-04-17 17:58:45 (3888): Required extension pack not installed, remote desktop not enabled.
2025-04-17 17:58:45 (3888): Enabling shared directory for VM.
2025-04-17 17:58:45 (3888): Starting VM using VBoxManage interface. (boinc_24a63fa815248db5, slot#0)
2025-04-17 17:58:50 (3888): Successfully started VM. (PID = '10580')
2025-04-17 17:58:50 (3888): Reporting VM Process ID to BOINC.
2025-04-17 17:58:50 (3888): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-17 17:58:50 (3888): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 17:58:50 (3888): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 17:58:50 (3888): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 17:58:50 (3888): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 17:58:50 (3888): Detected: Web Application Enabled (http://localhost:55129)
2025-04-17 17:58:50 (3888): Preference change detected
2025-04-17 17:58:50 (3888): Setting CPU throttle for VM. (100%)
2025-04-17 17:58:51 (3888): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 17:58:52 (3888): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 17:58:52 (3888): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 17:58:55 (3888): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 17:58:55 (3888): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 17:58:55 (3888): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 17:58:59 (3888): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 17:58:59 (3888): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 17:59:04 (3888): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 17:59:04 (3888): Guest Log: 00:00:00.000126 main     Log opened 2025-04-17T17:59:02.273560000Z
2025-04-17 17:59:04 (3888): Guest Log: 00:00:00.000197 main     OS Product: Linux
2025-04-17 17:59:04 (3888): Guest Log: 00:00:00.000233 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 17:59:04 (3888): Guest Log: 00:00:00.000280 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 17:59:04 (3888): Guest Log: 00:00:00.000325 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 17:59:04 (3888): Guest Log: 00:00:00.000326 main     Process ID: 1285
2025-04-17 17:59:04 (3888): Guest Log: 00:00:00.000327 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 17:59:04 (3888): Guest Log: 00:00:00.001994 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 17:59:04 (3888): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 17:59:04 (3888): Guest Log: [INFO] Mounting shared directory
2025-04-17 17:59:04 (3888): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 17:59:13 (3888): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 17:59:13 (3888): Guest Log: [INFO] Detected branch: prod
2025-04-17 17:59:14 (3888): Guest Log: 00:00:10.005090 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 187 995 928 000ns (GuestNow=1 744 905 554 281 781 000 ns GuestLast=1 744 912 742 277 709 000 ns fSetTimeLastLoop=true )
2025-04-17 17:59:16 (3888): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 17:59:16 (3888): Guest Log: Copying input files
2025-04-17 17:59:17 (3888): Guest Log: Copied input files into RunAtlas.
2025-04-17 17:59:17 (3888): Guest Log: Detected user-configured HTTP proxy at http://192.168.5.5:3128 - will set in /etc/cvmfs/default.local
2025-04-17 17:59:26 (3888): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 17:59:26 (3888): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 17:59:26 (3888): Guest Log: 2.6.3.0 1564 0 29604 144970 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.5.5:3128 1
2025-04-17 17:59:26 (3888): Guest Log: copied the webapp to /var/www
2025-04-17 17:59:26 (3888): Guest Log: ATHENA_PROC_NUMBER=2
2025-04-17 17:59:26 (3888): Guest Log: ATHENA_CORE_NUMBER=2
2025-04-17 17:59:27 (3888): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 17:59:27 (3888): Guest Log:  *** Starting ATLAS job. (PandaID=6604505667 taskID=44075483) ***
2025-04-17 19:38:55 (3888): Status Report: Elapsed Time: '6000.000000'
2025-04-17 19:38:55 (3888): Status Report: CPU Time: '10947.015625'
2025-04-17 19:59:16 (3888): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 21:59:51 (3888): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 21:59:52 (3888): Guest Log: 02:00:11.920701 timesync vgsvcTimeSyncWorker: Radical host time change: 7 245 067 000 000ns (HostNow=1 744 919 991 342 000 000 ns HostLast=1 744 912 746 275 000 000 ns)
2025-04-17 22:00:02 (3888): Guest Log: 02:00:21.921379 timesync vgsvcTimeSyncWorker: Radical guest time change: 7 245 145 571 000ns (GuestNow=1 744 920 001 342 719 000 ns GuestLast=1 744 912 756 197 148 000 ns fSetTimeLastLoop=true )
2025-04-17 23:19:35 (3888): Status Report: Elapsed Time: '12000.000000'
2025-04-17 23:19:35 (3888): Status Report: CPU Time: '22948.265625'
2025-04-18 00:19:50 (3888): Guest Log:  *** Job finished ***
2025-04-18 00:19:50 (3888): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:37,001 | INFO     | [data] queue_monitor thread has finished
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:41,232 | INFO     | job.realtimelogging is not enabled
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:42,233 | INFO     | [payload] run_realtimelog thread has finished
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:42,535 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668291708736)>', '<ExcThread(monitor, started 139667613665024)>']
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:43,337 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:43,337 | INFO     | [monitor] control thread has ended
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,537 | INFO     | all workflow threads have been joined
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,537 | INFO     | end of generic workflow (traces error code: 0)
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,537 | INFO     | traces error code: 0
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,614 [wrapper] ==== pilot stdout END ====
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,616 [wrapper] ==== wrapper stdout RESUME ====
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,619 [wrapper] pilotpid: 5862
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,622 [wrapper] Pilot exit status: 0
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,644 [wrapper] pandaids: 6604505667
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,673 [wrapper] cleanup supervisor_pilot 17639 5863
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,677 [wrapper] Test setup, not cleaning
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,680 [wrapper] apfmon messages muted
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,683 [wrapper] ==== wrapper stdout END ====
2025-04-18 00:19:50 (3888): Guest Log: 2025-04-17 22:19:47,686 [wrapper] ==== wrapper stderr END ====
2025-04-18 00:19:50 (3888): Guest Log:  *** Error codes and diagnostics ***
2025-04-18 00:19:50 (3888): Guest Log:     "exeErrorCode": 0,
2025-04-18 00:19:50 (3888): Guest Log:     "exeErrorDiag": "",
2025-04-18 00:19:50 (3888): Guest Log:     "pilotErrorCode": 0,
2025-04-18 00:19:50 (3888): Guest Log:     "pilotErrorDiag": "",
2025-04-18 00:19:50 (3888): Guest Log:  *** Listing of results directory ***
2025-04-18 00:19:50 (3888): Guest Log: total 189800
2025-04-18 00:19:50 (3888): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 16 20:09 pilot3.tar.gz
2025-04-18 00:19:50 (3888): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 16 20:33 runpilot2-wrapper.sh
2025-04-18 00:19:50 (3888): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 16 20:33 queuedata.json
2025-04-18 00:19:50 (3888): Guest Log: -rwxr-xr-x. 1 atlas atlas      9219 Apr 17 15:59 init_data.xml
2025-04-18 00:19:50 (3888): Guest Log: -rwxr-xr-x. 1 atlas atlas    508886 Apr 17 15:59 input.tar.gz
2025-04-18 00:19:50 (3888): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 17 15:59 start_atlas.sh
2025-04-18 00:19:50 (3888): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 15:59 EVNT.44075481._001777.pool.root.1 -> /data/./ATLAS.root_0
2025-04-18 00:19:50 (3888): Guest Log: -rw-r--r--. 1 atlas atlas      2579 Apr 17 15:59 pandaJob.out
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas       458 Apr 17 15:59 setup.sh.local
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas    990266 Apr 17 16:00 agis_schedconf.cvmfs.json
2025-04-18 00:19:50 (3888): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 16:00 pilot3
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas        97 Apr 17 22:18 pilot_heartbeat.json
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas 187138515 Apr 17 22:18 HITS.44075483._045447.pool.root.1
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas      1030 Apr 17 22:19 memory_monitor_summary.json
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 17 22:19 agis_ddmendpoints.agis.ALL.json
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas    321578 Apr 17 22:19 log.44075483._045447.job.log.tgz.1
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas      7708 Apr 17 22:19 heartbeat.json
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas      4608 Apr 17 22:19 pilotlog.txt
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas   1384761 Apr 17 22:19 log.44075483._045447.job.log.1
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 22:19 output.list
2025-04-18 00:19:50 (3888): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 22:19 runtime_log
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas   1730560 Apr 17 22:19 result.tar.gz
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas       653 Apr 17 22:19 XIALDmscOP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDml8aLDmfNiytn.diag
2025-04-18 00:19:50 (3888): Guest Log: -rw-r--r--. 1 atlas atlas     11271 Apr 17 22:19 runtime_log.err
2025-04-18 00:19:50 (3888): Guest Log: Looking for outputfile HITS.44075483._045447.pool.root.1
2025-04-18 00:19:50 (3888): Guest Log: HITS file was successfully produced
2025-04-18 00:19:50 (3888): Guest Log: -rw-------. 1 atlas atlas 187138515 Apr 17 22:18 /home/atlas/RunAtlas/HITS.44075483._045447.pool.root.1
2025-04-18 00:19:51 (3888): Guest Log: Successfully finished the ATLAS job!
2025-04-18 00:19:51 (3888): Guest Log: Copying the results back to the shared directory!
2025-04-18 00:19:51 (3888): Guest Log:  *** Contents of shared directory: ***
2025-04-18 00:19:51 (3888): Guest Log: total 401864
2025-04-18 00:19:51 (3888): Guest Log: -rwxrwxrwx. 1 root root 222089136 Apr 17 15:58 ATLAS.root_0
2025-04-18 00:19:51 (3888): Guest Log: -rwxrwxrwx. 1 root root 187138515 Apr 17 22:19 HITS.pool.root.1
2025-04-18 00:19:51 (3888): Guest Log: -rwxrwxrwx. 1 root root      9219 Apr 17 15:58 init_data.xml
2025-04-18 00:19:51 (3888): Guest Log: -rwxrwxrwx. 1 root root    508886 Apr 16 23:42 input.tar.gz
2025-04-18 00:19:51 (3888): Guest Log: -rwxrwxrwx. 1 root root   1730560 Apr 17 22:19 result.tar.gz
2025-04-18 00:19:51 (3888): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 16 23:42 start_atlas.sh
2025-04-18 00:19:51 (3888): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-18 00:19:51 (3888): VM Completion File Detected.
2025-04-18 00:19:51 (3888): Powering off VM.
2025-04-18 00:19:51 (3888): Successfully stopped VM.
2025-04-18 00:19:51 (3888): Deregistering VM. (boinc_24a63fa815248db5, slot#0)
2025-04-18 00:19:51 (3888): Removing network bandwidth throttle group from VM.
2025-04-18 00:19:52 (3888): Removing VM from VirtualBox.
00:19:57 (3888): called boinc_finish(0)

</stderr_txt>
]]>

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