Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 06:03:00 (20540): Detected: vboxwrapper 26206
2025-04-19 06:03:00 (20540): Detected: BOINC client v8.0.2
2025-04-19 06:03:00 (20540): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-19 06:03:01 (20540): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 06:03:01 (20540): Create VM. (boinc_ca02e7379209e194, slot#13)
2025-04-19 06:03:02 (20540): Setting Memory Size for VM. (4800MB)
2025-04-19 06:03:02 (20540): Setting CPU Count for VM. (8)
2025-04-19 06:03:03 (20540): Setting Chipset Options for VM.
2025-04-19 06:03:03 (20540): Setting Graphics Controller Options for VM.
2025-04-19 06:03:03 (20540): Setting Boot Options for VM.
2025-04-19 06:03:03 (20540): Setting Network Configuration for NAT.
2025-04-19 06:03:04 (20540): Enabling VM Network Access.
2025-04-19 06:03:04 (20540): Disabling USB Support for VM.
2025-04-19 06:03:04 (20540): Disabling COM Port Support for VM.
2025-04-19 06:03:05 (20540): Disabling LPT Port Support for VM.
2025-04-19 06:03:05 (20540): Disabling Audio Support for VM.
2025-04-19 06:03:05 (20540): Disabling Clipboard Support for VM.
2025-04-19 06:03:05 (20540): Disabling Drag and Drop Support for VM.
2025-04-19 06:03:06 (20540): Adding storage controller(s) to VM.
2025-04-19 06:03:06 (20540): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 06:03:07 (20540): Adding VirtualBox Guest Additions to VM.
2025-04-19 06:03:07 (20540): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 06:03:07 (20540): forwarding host port 56482 to guest port 80
2025-04-19 06:03:07 (20540): Enabling remote desktop for VM.
2025-04-19 06:03:08 (20540): Required extension pack not installed, remote desktop not enabled.
2025-04-19 06:03:08 (20540): Enabling shared directory for VM.
2025-04-19 06:03:08 (20540): Starting VM using VBoxManage interface. (boinc_ca02e7379209e194, slot#13)
2025-04-19 06:03:13 (20540): Successfully started VM. (PID = '12708')
2025-04-19 06:03:13 (20540): Reporting VM Process ID to BOINC.
2025-04-19 06:03:13 (20540): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-19 06:03:13 (20540): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 06:03:13 (20540): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 06:03:13 (20540): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 06:03:13 (20540): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 06:03:13 (20540): Detected: Web Application Enabled (http://localhost:56482)
2025-04-19 06:03:13 (20540): Preference change detected
2025-04-19 06:03:13 (20540): Setting CPU throttle for VM. (50%)
2025-04-19 06:03:13 (20540): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 06:03:15 (20540): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 06:03:15 (20540): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 06:03:18 (20540): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 06:03:18 (20540): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 06:03:18 (20540): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 06:03:25 (20540): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 06:03:25 (20540): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 06:03:33 (20540): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 06:03:33 (20540): Guest Log: 00:00:00.000109 main     Log opened 2025-04-19T06:03:31.802189000Z
2025-04-19 06:03:33 (20540): Guest Log: 00:00:00.000227 main     OS Product: Linux
2025-04-19 06:03:33 (20540): Guest Log: 00:00:00.000267 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 06:03:33 (20540): Guest Log: 00:00:00.000299 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 06:03:33 (20540): Guest Log: 00:00:00.000331 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 06:03:33 (20540): Guest Log: 00:00:00.000331 main     Process ID: 1366
2025-04-19 06:03:33 (20540): Guest Log: 00:00:00.000332 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 06:03:33 (20540): Guest Log: 00:00:00.001114 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 06:03:33 (20540): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 06:03:33 (20540): Guest Log: [INFO] Mounting shared directory
2025-04-19 06:03:33 (20540): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 06:03:40 (20540): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 06:03:40 (20540): Guest Log: [INFO] Detected branch: prod
2025-04-19 06:03:40 (20540): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 06:03:40 (20540): Guest Log: Copying input files
2025-04-19 06:03:41 (20540): Guest Log: Copied input files into RunAtlas.
2025-04-19 06:03:42 (20540): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 06:03:42 (20540): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 06:03:42 (20540): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 06:03:42 (20540): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 06:03:43 (20540): Guest Log: 00:00:10.005983 timesync vgsvcTimeSyncWorker: Radical guest time change: 21 611 484 390 000ns (GuestNow=1 745 064 223 288 698 000 ns GuestLast=1 745 042 611 804 308 000 ns fSetTimeLastLoop=true )
2025-04-19 06:03:53 (20540): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 06:03:53 (20540): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 06:03:53 (20540): Guest Log: 2.6.3.0 1648 0 32176 145037 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ihep-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 06:03:54 (20540): Guest Log: copied the webapp to /var/www
2025-04-19 06:03:54 (20540): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-19 06:03:54 (20540): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-19 06:03:55 (20540): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 06:03:55 (20540): Guest Log:  *** Starting ATLAS job. (PandaID=6594932916 taskID=44075164) ***
2025-04-19 06:33:57 (20540): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 07:39:11 (20540): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 07:39:18 (20540): Guest Log: 00:30:31.678653 timesync vgsvcTimeSyncWorker: Radical host time change: 3 923 253 000 000ns (HostNow=1 745 069 958 159 000 000 ns HostLast=1 745 066 034 906 000 000 ns)
2025-04-19 07:39:28 (20540): Guest Log: 00:30:41.679066 timesync vgsvcTimeSyncWorker: Radical guest time change: 3 923 337 752 000ns (GuestNow=1 745 069 968 229 163 000 ns GuestLast=1 745 066 044 891 411 000 ns fSetTimeLastLoop=true )
2025-04-19 08:44:53 (20540): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 08:57:39 (20540): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 08:57:59 (20540): Guest Log:  *** Job finished ***
2025-04-19 08:57:59 (20540): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:44:58,089 | INFO     | [data] queue_monitor thread has finished
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:04,825 | INFO     | job.realtimelogging is not enabled
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:05,838 | INFO     | [payload] run_realtimelog thread has finished
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:06,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140658633758528)>', '<ExcThread(monitor, started 140657779775232)>']
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:07,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:07,717 | INFO     | [monitor] control thread has ended
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:11,904 | INFO     | all workflow threads have been joined
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:11,905 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:11,905 | INFO     | traces error code: 0
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:11,905 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:11,956 [wrapper] ==== pilot stdout END ====
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:11,961 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:11,965 [wrapper] pilotpid: 6023
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:11,970 [wrapper] Pilot exit status: 0
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:12,127 [wrapper] pandaids: 6594932916
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:12,160 [wrapper] cleanup supervisor_pilot  2246 6024
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:12,165 [wrapper] Test setup, not cleaning
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:12,169 [wrapper] apfmon messages muted
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:12,173 [wrapper] ==== wrapper stdout END ====
2025-04-19 08:57:59 (20540): Guest Log: 2025-04-19 14:45:12,178 [wrapper] ==== wrapper stderr END ====
2025-04-19 08:57:59 (20540): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 08:57:59 (20540): Guest Log:     "exeErrorCode": 0,
2025-04-19 08:57:59 (20540): Guest Log:     "exeErrorDiag": "",
2025-04-19 08:57:59 (20540): Guest Log:     "pilotErrorCode": 0,
2025-04-19 08:57:59 (20540): Guest Log:     "pilotErrorDiag": "",
2025-04-19 08:57:59 (20540): Guest Log:  *** Listing of results directory ***
2025-04-19 08:57:59 (20540): Guest Log: total 198296
2025-04-19 08:57:59 (20540): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr  8 16:40 pilot3.tar.gz
2025-04-19 08:57:59 (20540): Guest Log: -rwx------. 1 atlas atlas     37140 Apr  8 17:36 runpilot2-wrapper.sh
2025-04-19 08:57:59 (20540): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr  8 17:36 queuedata.json
2025-04-19 08:57:59 (20540): Guest Log: -rwxr-xr-x. 1 atlas atlas     12262 Apr 19 12:03 init_data.xml
2025-04-19 08:57:59 (20540): Guest Log: -rwxr-xr-x. 1 atlas atlas    508870 Apr 19 12:03 input.tar.gz
2025-04-19 08:57:59 (20540): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 19 12:03 start_atlas.sh
2025-04-19 08:57:59 (20540): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 19 12:03 EVNT.44075162._000203.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 08:57:59 (20540): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Apr 19 12:03 pandaJob.out
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas       424 Apr 19 12:04 setup.sh.local
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 19 12:06 agis_schedconf.cvmfs.json
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 12:06 agis_ddmendpoints.agis.ALL.json
2025-04-19 08:57:59 (20540): Guest Log: drwx------. 4 atlas atlas      4096 Apr 19 12:06 pilot3
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas 197711151 Apr 19 14:44 HITS.44075164._005068.pool.root.1
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas      1028 Apr 19 14:44 memory_monitor_summary.json
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas        97 Apr 19 14:44 pilot_heartbeat.json
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas    311486 Apr 19 14:44 log.44075164._005068.job.log.tgz.1
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas      7719 Apr 19 14:44 heartbeat.json
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas      4485 Apr 19 14:45 pilotlog.txt
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas    459143 Apr 19 14:45 log.44075164._005068.job.log.1
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 14:45 output.list
2025-04-19 08:57:59 (20540): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 14:45 runtime_log
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas    788480 Apr 19 14:45 result.tar.gz
2025-04-19 08:57:59 (20540): Guest Log: -rw-r--r--. 1 atlas atlas     10965 Apr 19 14:45 runtime_log.err
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas       663 Apr 19 14:45 3b1LDmP3RM7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmN8JLDmwVZoKn.diag
2025-04-19 08:57:59 (20540): Guest Log: Looking for outputfile HITS.44075164._005068.pool.root.1
2025-04-19 08:57:59 (20540): Guest Log: HITS file was successfully produced
2025-04-19 08:57:59 (20540): Guest Log: -rw-------. 1 atlas atlas 197711151 Apr 19 14:44 /home/atlas/RunAtlas/HITS.44075164._005068.pool.root.1
2025-04-19 08:58:00 (20540): Guest Log: Successfully finished the ATLAS job!
2025-04-19 08:58:00 (20540): Guest Log: Copying the results back to the shared directory!
2025-04-19 08:58:00 (20540): Guest Log:  *** Contents of shared directory: ***
2025-04-19 08:58:00 (20540): Guest Log: total 411288
2025-04-19 08:58:00 (20540): Guest Log: -rwxrwxrwx. 1 root root 222108701 Apr 19 12:03 ATLAS.root_0
2025-04-19 08:58:00 (20540): Guest Log: -rwxrwxrwx. 1 root root 197711151 Apr 19  2025 HITS.pool.root.1
2025-04-19 08:58:00 (20540): Guest Log: -rwxrwxrwx. 1 root root     12262 Apr 19 12:03 init_data.xml
2025-04-19 08:58:00 (20540): Guest Log: -rwxrwxrwx. 1 root root    508870 Apr 16 23:05 input.tar.gz
2025-04-19 08:58:00 (20540): Guest Log: -rwxrwxrwx. 1 root root    788480 Apr 19  2025 result.tar.gz
2025-04-19 08:58:00 (20540): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 16 23:05 start_atlas.sh
2025-04-19 08:58:00 (20540): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 08:58:00 (20540): VM Completion File Detected.
2025-04-19 08:58:00 (20540): Powering off VM.
2025-04-19 08:58:01 (20540): Successfully stopped VM.
2025-04-19 08:58:01 (20540): Deregistering VM. (boinc_ca02e7379209e194, slot#13)
2025-04-19 08:58:01 (20540): Removing network bandwidth throttle group from VM.
2025-04-19 08:58:01 (20540): Removing VM from VirtualBox.
08:58:06 (20540): called boinc_finish(0)

</stderr_txt>
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