Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:28:45 (2833383): wrapper (7.7.26015): starting
20:28:45 (2833383): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 20:28:45] Arguments: --nthreads 12
[2025-04-17 20:28:45] Threads: 12
[2025-04-17 20:28:45] Checking for CVMFS
[2025-04-17 20:28:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 20:28:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 20:28:46] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 20:28:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 20:28:46] 2.12.7.0 2387294 1577 54128 144977 3 186 2234194 4096000 794 130560 0 1180350 99.987 404253 865 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-17 20:28:46] CVMFS is ok
[2025-04-17 20:28:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 20:28:46] Checking for apptainer binary...
[2025-04-17 20:28:46] apptainer is not installed, using version from CVMFS
[2025-04-17 20:28:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 20:28:46] ggg3250
[2025-04-17 20:28:46] apptainer works
[2025-04-17 20:28:46] Set ATHENA_PROC_NUMBER=12
[2025-04-17 20:28:46] Set ATHENA_CORE_NUMBER=12
[2025-04-17 20:28:46] Starting ATLAS job with PandaID=6604097404
[2025-04-17 20:28:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-18 01:06:12]  *** The last 200 lines of the pilot log: ***
[2025-04-18 01:06:12] 2025-04-18 01:05:52,602 | INFO     | mean x: 1744930044.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,602 | INFO     | mean y: 2614947.6373626376
[2025-04-18 01:06:12] 2025-04-18 01:05:52,602 | INFO     | -- intersect: -34839490317.37113
[2025-04-18 01:06:12] 2025-04-18 01:05:52,602 | INFO     | intersect: -34839490317.37113
[2025-04-18 01:06:12] 2025-04-18 01:05:52,602 | INFO     | chi2: 5.349105838305576
[2025-04-18 01:06:12] 2025-04-18 01:05:52,603 | INFO     | sum of square deviations: 5968658887.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,603 | INFO     | sum of deviations: 142625170153.49997
[2025-04-18 01:06:12] 2025-04-18 01:05:52,604 | INFO     | mean x: 1744929891.5
[2025-04-18 01:06:12] 2025-04-18 01:05:52,604 | INFO     | mean y: 2622277.5410447763
[2025-04-18 01:06:12] 2025-04-18 01:05:52,604 | INFO     | -- intersect: -41693666184.0374
[2025-04-18 01:06:12] 2025-04-18 01:05:52,604 | INFO     | intersect: -41693666184.0374
[2025-04-18 01:06:12] 2025-04-18 01:05:52,604 | INFO     | chi2: 4.580353805365999
[2025-04-18 01:06:12] 2025-04-18 01:05:52,604 | INFO     | current chi2=4.580353805365999 (change=14.371598846193187 %)
[2025-04-18 01:06:12] 2025-04-18 01:05:52,604 | INFO     | right removable region: 267
[2025-04-18 01:06:12] 2025-04-18 01:05:52,604 | INFO     | sum of square deviations: 5968658887.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,605 | INFO     | sum of deviations: 53605257035.50001
[2025-04-18 01:06:12] 2025-04-18 01:05:52,605 | INFO     | mean x: 1744930196.5
[2025-04-18 01:06:12] 2025-04-18 01:05:52,605 | INFO     | mean y: 2647308.5708955224
[2025-04-18 01:06:12] 2025-04-18 01:05:52,605 | INFO     | -- intersect: -15668784660.194593
[2025-04-18 01:06:12] 2025-04-18 01:05:52,605 | INFO     | intersect: -15668784660.194593
[2025-04-18 01:06:12] 2025-04-18 01:05:52,605 | INFO     | chi2: 2.84918561777348
[2025-04-18 01:06:12] 2025-04-18 01:05:52,605 | INFO     | current chi2=2.84918561777348 (change=46.73529176839003 %)
[2025-04-18 01:06:12] 2025-04-18 01:05:52,606 | INFO     | sum of square deviations: 5640782972.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,606 | INFO     | sum of deviations: -5013738413.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,607 | INFO     | mean x: 1744930349.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,607 | INFO     | mean y: 2674574.437262357
[2025-04-18 01:06:12] 2025-04-18 01:05:52,607 | INFO     | -- intersect: 1553633787.4078116
[2025-04-18 01:06:12] 2025-04-18 01:05:52,607 | INFO     | intersect: 1553633787.4078116
[2025-04-18 01:06:12] 2025-04-18 01:05:52,607 | INFO     | chi2: 1.3358431105456252
[2025-04-18 01:06:12] 2025-04-18 01:05:52,607 | INFO     | current chi2=1.3358431105456252 (change=53.114914584275795 %)
[2025-04-18 01:06:12] 2025-04-18 01:05:52,607 | INFO     | sum of square deviations: 5325139844.5
[2025-04-18 01:06:12] 2025-04-18 01:05:52,608 | INFO     | sum of deviations: -33146978154.499992
[2025-04-18 01:06:12] 2025-04-18 01:05:52,608 | INFO     | mean x: 1744930501.5
[2025-04-18 01:06:12] 2025-04-18 01:05:52,608 | INFO     | mean y: 2688136.4457364343
[2025-04-18 01:06:12] 2025-04-18 01:05:52,608 | INFO     | -- intersect: 10864219458.30945
[2025-04-18 01:06:12] 2025-04-18 01:05:52,608 | INFO     | intersect: 10864219458.30945
[2025-04-18 01:06:12] 2025-04-18 01:05:52,608 | INFO     | chi2: 0.954674728781043
[2025-04-18 01:06:12] 2025-04-18 01:05:52,608 | INFO     | current chi2=0.954674728781043 (change=28.533918298900684 %)
[2025-04-18 01:06:12] 2025-04-18 01:05:52,609 | INFO     | sum of square deviations: 5021496942.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,609 | INFO     | sum of deviations: -41172707254.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,610 | INFO     | mean x: 1744930654.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,610 | INFO     | mean y: 2692123.4782608696
[2025-04-18 01:06:12] 2025-04-18 01:05:52,610 | INFO     | -- intersect: 14309883748.90189
[2025-04-18 01:06:12] 2025-04-18 01:05:52,610 | INFO     | intersect: 14309883748.90189
[2025-04-18 01:06:12] 2025-04-18 01:05:52,610 | INFO     | chi2: 0.8832295445336448
[2025-04-18 01:06:12] 2025-04-18 01:05:52,610 | INFO     | current chi2=0.8832295445336448 (change=7.4837200664797665 %)
[2025-04-18 01:06:12] 2025-04-18 01:05:52,610 | INFO     | left removable region: 40
[2025-04-18 01:06:12] 2025-04-18 01:05:52,610 | INFO     | sum of square deviations: 3627000098.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,611 | INFO     | sum of deviations: -1912954753.9999995
[2025-04-18 01:06:12] 2025-04-18 01:05:52,611 | INFO     | mean x: 1744931081.0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,611 | INFO     | mean y: 2689404.881057269
[2025-04-18 01:06:12] 2025-04-18 01:05:52,611 | INFO     | -- intersect: 923002092.1186268
[2025-04-18 01:06:12] 2025-04-18 01:05:52,611 | INFO     | intersect: 923002092.1186268
[2025-04-18 01:06:12] 2025-04-18 01:05:52,611 | INFO     | chi2: 0.03382968826098379
[2025-04-18 01:06:12] 2025-04-18 01:05:52,611 | INFO     | -- intersect: 923002092.1186268
[2025-04-18 01:06:12] 2025-04-18 01:05:52,611 | INFO     | current memory leak: -0.53 B/s (using 227 data points, chi2=0.03)
[2025-04-18 01:06:12] 2025-04-18 01:05:52,611 | INFO     | ..............................
[2025-04-18 01:06:12] 2025-04-18 01:05:52,612 | INFO     | . Timing measurements:
[2025-04-18 01:06:12] 2025-04-18 01:05:52,612 | INFO     | . get job = 0 s
[2025-04-18 01:06:12] 2025-04-18 01:05:52,612 | INFO     | . initial setup = 1 s
[2025-04-18 01:06:12] 2025-04-18 01:05:52,612 | INFO     | . payload setup = 2 s
[2025-04-18 01:06:12] 2025-04-18 01:05:52,612 | INFO     | . stage-in = 0 s
[2025-04-18 01:06:12] 2025-04-18 01:05:52,612 | INFO     | . payload execution = 16598 s
[2025-04-18 01:06:12] 2025-04-18 01:05:52,612 | INFO     | . stage-out = 0 s
[2025-04-18 01:06:12] 2025-04-18 01:05:52,612 | INFO     | . log creation = 0 s
[2025-04-18 01:06:12] 2025-04-18 01:05:52,612 | INFO     | ..............................
[2025-04-18 01:06:12] 2025-04-18 01:05:52,861 | INFO     | 
[2025-04-18 01:06:12] 2025-04-18 01:05:52,861 | INFO     | job summary report
[2025-04-18 01:06:12] 2025-04-18 01:05:52,861 | INFO     | --------------------------------------------------
[2025-04-18 01:06:12] 2025-04-18 01:05:52,861 | INFO     | PanDA job id: 6604097404
[2025-04-18 01:06:12] 2025-04-18 01:05:52,861 | INFO     | task id: 44075483
[2025-04-18 01:06:12] 2025-04-18 01:05:52,861 | INFO     | errors: (none)
[2025-04-18 01:06:12] 2025-04-18 01:05:52,861 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | pilot state: finished 
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | transexitcode: 0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | exeerrorcode: 0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | exeerrordiag: 
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | exitcode: 0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | exitmsg: OK
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | cpuconsumptiontime: 23726 s
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | nevents: 400
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | neventsw: 0
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | pid: 2843340
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | pgrp: 2843340
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | corecount: 12
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | event service: False
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | sizes: {0: 2426795, 2: 2427001, 11: 2427029, 16604: 2458239, 16605: 2467226, 16606: 2467282, 16610: 2467580}
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | --------------------------------------------------
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | 
[2025-04-18 01:06:12] 2025-04-18 01:05:52,862 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-18 01:06:12] 2025-04-18 01:05:52,870 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,870 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,870 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,870 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,870 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,870 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,870 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | job 6604097404 has completed (purged errors)
[2025-04-18 01:06:12] 2025-04-18 01:05:52,871 | INFO     | overall cleanup function is called
[2025-04-18 01:06:12] 2025-04-18 01:05:53,878 | INFO     | --- collectZombieJob: --- 10, [2843340]
[2025-04-18 01:06:12] 2025-04-18 01:05:53,878 | INFO     | zombie collector waiting for pid 2843340
[2025-04-18 01:06:12] 2025-04-18 01:05:53,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-18 01:06:12] 2025-04-18 01:05:53,878 | INFO     | collected zombie processes
[2025-04-18 01:06:12] 2025-04-18 01:05:53,878 | INFO     | will attempt to kill all subprocesses of pid=2843340
[2025-04-18 01:06:12] 2025-04-18 01:05:53,908 | INFO     | process IDs to be killed: [2843340] (in reverse order)
[2025-04-18 01:06:12] 2025-04-18 01:05:53,924 | WARNING  | found no corresponding commands to process id(s)
[2025-04-18 01:06:12] 2025-04-18 01:05:53,924 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-18 01:06:12] 2025-04-18 01:05:53,925 | INFO     | did not find any defunct processes belonging to 2843340
[2025-04-18 01:06:12] 2025-04-18 01:05:53,925 | INFO     | did not find any defunct processes belonging to 2843340
[2025-04-18 01:06:12] 2025-04-18 01:05:53,926 | INFO     | ready for new job
[2025-04-18 01:06:12] 2025-04-18 01:05:53,926 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-18 01:06:12] 2025-04-18 01:05:53,927 | INFO     | **************************************
[2025-04-18 01:06:12] 2025-04-18 01:05:53,927 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-18 01:06:12] 2025-04-18 01:05:53,927 | INFO     | **************************************
[2025-04-18 01:06:12] 2025-04-18 01:05:53,927 | INFO     | 
[2025-04-18 01:06:12] 2025-04-18 01:05:53,947 | INFO     | architecture information:
[2025-04-18 01:06:12] 2025-04-18 01:05:53,947 | INFO     | executing command: cat /etc/os-release
[2025-04-18 01:06:12] 2025-04-18 01:05:53,953 | INFO     | cat /etc/os-release:
[2025-04-18 01:06:12] NAME="CentOS Linux"
[2025-04-18 01:06:12] VERSION="7 (Core)"
[2025-04-18 01:06:12] ID="centos"
[2025-04-18 01:06:12] ID_LIKE="rhel fedora"
[2025-04-18 01:06:12] VERSION_ID="7"
[2025-04-18 01:06:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-18 01:06:12] ANSI_COLOR="0;31"
[2025-04-18 01:06:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-18 01:06:12] HOME_URL="https://www.centos.org/"
[2025-04-18 01:06:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-18 01:06:12] 
[2025-04-18 01:06:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-18 01:06:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-18 01:06:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-18 01:06:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-18 01:06:12] 
[2025-04-18 01:06:12] 2025-04-18 01:05:53,953 | INFO     | **************************************
[2025-04-18 01:06:12] 2025-04-18 01:05:54,021 | INFO     | 16624s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-18 01:06:12] 2025-04-18 01:05:54,455 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/2
[2025-04-18 01:06:12] 2025-04-18 01:05:54,461 | INFO     | sufficient remaining disk space (188709076992 B)
[2025-04-18 01:06:12] 2025-04-18 01:05:54,461 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-18 01:06:12] 2025-04-18 01:05:54,461 | INFO     | current server update state: UPDATING_FINAL
[2025-04-18 01:06:12] 2025-04-18 01:05:54,461 | INFO     | update_server=False
[2025-04-18 01:06:12] 2025-04-18 01:05:54,461 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-18 01:06:12] 2025-04-18 01:05:54,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-18 01:06:12] 2025-04-18 01:05:54,462 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-18 01:06:12] 2025-04-18 01:05:54,544 | INFO     | all job control threads have been joined
[2025-04-18 01:06:12] 2025-04-18 01:05:54,816 | INFO     | all payload control threads have been joined
[2025-04-18 01:06:12] 2025-04-18 01:05:54,981 | INFO     | all data control threads have been joined
[2025-04-18 01:06:12] 2025-04-18 01:05:55,022 | INFO     | found 0 job(s) in 20 queues
[2025-04-18 01:06:12] 2025-04-18 01:05:55,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-18 01:06:12] 2025-04-18 01:05:55,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-18 01:06:12] 2025-04-18 01:05:55,062 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-18 01:06:12] 2025-04-18 01:05:55,062 | INFO     | aborting loop
[2025-04-18 01:06:12] 2025-04-18 01:05:55,422 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-18 01:06:12] 2025-04-18 01:05:55,467 | INFO     | [job] retrieve thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:55,467 | INFO     | [job] queue monitor thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:55,544 | INFO     | [payload] validate_post thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:55,549 | INFO     | [job] control thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:55,662 | INFO     | [data] copytool_in thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:55,821 | INFO     | [payload] control thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:55,858 | INFO     | [payload] validate_pre thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:55,865 | INFO     | [payload] failed_post thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:55,985 | INFO     | [data] control thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:56,067 | INFO     | [job] job monitor thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:56,123 | INFO     | [job] validate thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:56,504 | INFO     | [payload] execute_payloads thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:56,662 | INFO     | [job] create_data_payload thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:57,427 | INFO     | [data] copytool_out thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:05:58,465 | INFO     | [data] queue_monitor thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:06:04,513 | INFO     | job.realtimelogging is not enabled
[2025-04-18 01:06:12] 2025-04-18 01:06:05,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-18 01:06:12] 2025-04-18 01:06:06,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140287499999040)>', '<ExcThread(monitor, started 140287204628224)>']
[2025-04-18 01:06:12] 2025-04-18 01:06:07,069 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-18 01:06:12] 2025-04-18 01:06:07,069 | INFO     | [monitor] control thread has ended
[2025-04-18 01:06:12] 2025-04-18 01:06:11,909 | INFO     | all workflow threads have been joined
[2025-04-18 01:06:12] 2025-04-18 01:06:11,909 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-18 01:06:12] 2025-04-18 01:06:11,909 | INFO     | traces error code: 0
[2025-04-18 01:06:12] 2025-04-18 01:06:11,909 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-18 01:06:12] 2025-04-18 01:06:11,965 [wrapper] ==== pilot stdout END ====
[2025-04-18 01:06:12] 2025-04-18 01:06:11,966 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-18 01:06:12] 2025-04-18 01:06:11,968 [wrapper] pilotpid: 2836978
[2025-04-18 01:06:12] 2025-04-18 01:06:11,969 [wrapper] Pilot exit status: 0
[2025-04-18 01:06:12] 2025-04-18 01:06:11,973 [wrapper] pandaids: 6604097404
[2025-04-18 01:06:12] 2025-04-18 01:06:11,982 [wrapper] cleanup supervisor_pilot 2885769 2836979
[2025-04-18 01:06:12] 2025-04-18 01:06:11,983 [wrapper] Test setup, not cleaning
[2025-04-18 01:06:12] 2025-04-18 01:06:11,984 [wrapper] apfmon messages muted
[2025-04-18 01:06:12] 2025-04-18 01:06:11,985 [wrapper] ==== wrapper stdout END ====
[2025-04-18 01:06:12] 2025-04-18 01:06:11,986 [wrapper] ==== wrapper stderr END ====
[2025-04-18 01:06:12]  *** Error codes and diagnostics ***
[2025-04-18 01:06:12]     "exeErrorCode": 0,
[2025-04-18 01:06:12]     "exeErrorDiag": "",
[2025-04-18 01:06:12]     "pilotErrorCode": 0,
[2025-04-18 01:06:12]     "pilotErrorDiag": "",
[2025-04-18 01:06:12]  *** Listing of results directory ***
[2025-04-18 01:06:12] total 414088
[2025-04-18 01:06:12] -rw-r--r-- 1 boinc boinc      5111 Apr 16 15:01 queuedata.json
[2025-04-18 01:06:12] -rwx------ 1 boinc boinc     37140 Apr 16 15:02 runpilot2-wrapper.sh
[2025-04-18 01:06:12] -rw-r--r-- 1 boinc boinc    495897 Apr 16 15:02 pilot3.tar.gz
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc       100 Apr 17 20:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-18 01:06:12] -rwxr-xr-x 1 boinc boinc      7986 Apr 17 20:28 run_atlas
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc       105 Apr 17 20:28 job.xml
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc      9337 Apr 17 20:28 init_data.xml
[2025-04-18 01:06:12] -rw-r--r-- 2 boinc boinc 223208207 Apr 17 20:28 EVNT.44075481._000412.pool.root.1
[2025-04-18 01:06:12] -rw-r--r-- 2 boinc boinc     17569 Apr 17 20:28 start_atlas.sh
[2025-04-18 01:06:12] drwxrwx--x 2 boinc boinc      4096 Apr 17 20:28 shared
[2025-04-18 01:06:12] -rw-r--r-- 2 boinc boinc    508885 Apr 17 20:28 input.tar.gz
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc         0 Apr 17 20:28 boinc_lockfile
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc      2578 Apr 17 20:28 pandaJob.out
[2025-04-18 01:06:12] -rw------- 1 boinc boinc       424 Apr 17 20:28 setup.sh.local
[2025-04-18 01:06:12] -rw------- 1 boinc boinc    990274 Apr 17 20:28 agis_schedconf.cvmfs.json
[2025-04-18 01:06:12] drwx------ 4 boinc boinc      4096 Apr 17 20:28 pilot3
[2025-04-18 01:06:12] -rw------- 1 boinc boinc 192860550 Apr 18 01:05 HITS.44075483._041839.pool.root.1
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc       530 Apr 18 01:05 boinc_task_state.xml
[2025-04-18 01:06:12] -rw------- 1 boinc boinc      1020 Apr 18 01:05 memory_monitor_summary.json
[2025-04-18 01:06:12] -rw------- 1 boinc boinc   1618536 Apr 18 01:05 agis_ddmendpoints.agis.ALL.json
[2025-04-18 01:06:12] -rw------- 1 boinc boinc    472593 Apr 18 01:05 log.44075483._041839.job.log.tgz.1
[2025-04-18 01:06:12] -rw------- 1 boinc boinc      7662 Apr 18 01:05 heartbeat.json
[2025-04-18 01:06:12] -rw------- 1 boinc boinc        95 Apr 18 01:05 pilot_heartbeat.json
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc      8192 Apr 18 01:05 boinc_mmap_file
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc        28 Apr 18 01:05 wrapper_checkpoint.txt
[2025-04-18 01:06:12] -rw------- 1 boinc boinc      4565 Apr 18 01:06 pilotlog.txt
[2025-04-18 01:06:12] -rw------- 1 boinc boinc   1570747 Apr 18 01:06 log.44075483._041839.job.log.1
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc       620 Apr 18 01:06 runtime_log
[2025-04-18 01:06:12] -rw------- 1 boinc boinc   2058240 Apr 18 01:06 result.tar.gz
[2025-04-18 01:06:12] -rw------- 1 boinc boinc       357 Apr 18 01:06 output.list
[2025-04-18 01:06:12] -rw------- 1 boinc boinc       653 Apr 18 01:06 zxHODmuSJP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmpXaLDmTCWQwm.diag
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc     11405 Apr 18 01:06 runtime_log.err
[2025-04-18 01:06:12] -rw-rw-r-- 1 boinc boinc     20506 Apr 18 01:06 stderr.txt
[2025-04-18 01:06:12] HITS file was successfully produced:
[2025-04-18 01:06:12] -rw------- 1 boinc boinc 192860550 Apr 18 01:05 shared/HITS.pool.root.1
[2025-04-18 01:06:12]  *** Contents of shared directory: ***
[2025-04-18 01:06:12] total 408864
[2025-04-18 01:06:12] -rw-r--r-- 2 boinc boinc 223208207 Apr 17 20:28 ATLAS.root_0
[2025-04-18 01:06:12] -rw-r--r-- 2 boinc boinc     17569 Apr 17 20:28 start_atlas.sh
[2025-04-18 01:06:12] -rw-r--r-- 2 boinc boinc    508885 Apr 17 20:28 input.tar.gz
[2025-04-18 01:06:12] -rw------- 1 boinc boinc 192860550 Apr 18 01:05 HITS.pool.root.1
[2025-04-18 01:06:12] -rw------- 1 boinc boinc   2058240 Apr 18 01:06 result.tar.gz
01:06:13 (2833383): run_atlas exited; CPU time 23796.013371
01:06:13 (2833383): called boinc_finish(0)

</stderr_txt>
]]>

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