Stderr output

<core_client_version>7.22.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-16 18:55:28 (1928): Detected: vboxwrapper 26206
2025-04-16 18:55:28 (1928): Detected: BOINC client v7.22.2
2025-04-16 18:55:29 (1928): Detected: VirtualBox VboxManage Interface (Version: 7.0.6)
2025-04-16 18:55:30 (1928): Successfully copied 'init_data.xml' to the shared directory.
2025-04-16 18:55:30 (1928): Create VM. (boinc_d10447f372d39110, slot#7)
2025-04-16 18:55:31 (1928): Setting Memory Size for VM. (4700MB)
2025-04-16 18:55:32 (1928): Setting CPU Count for VM. (7)
2025-04-16 18:55:32 (1928): Setting Chipset Options for VM.
2025-04-16 18:55:32 (1928): Setting Graphics Controller Options for VM.
2025-04-16 18:55:33 (1928): Setting Boot Options for VM.
2025-04-16 18:55:33 (1928): Setting Network Configuration for NAT.
2025-04-16 18:55:33 (1928): Enabling VM Network Access.
2025-04-16 18:55:34 (1928): Disabling USB Support for VM.
2025-04-16 18:55:34 (1928): Disabling COM Port Support for VM.
2025-04-16 18:55:34 (1928): Disabling LPT Port Support for VM.
2025-04-16 18:55:35 (1928): Disabling Audio Support for VM.
2025-04-16 18:55:35 (1928): Disabling Clipboard Support for VM.
2025-04-16 18:55:35 (1928): Disabling Drag and Drop Support for VM.
2025-04-16 18:55:36 (1928): Adding storage controller(s) to VM.
2025-04-16 18:55:36 (1928): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-16 18:55:39 (1928): Adding VirtualBox Guest Additions to VM.
2025-04-16 18:55:39 (1928): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-16 18:55:40 (1928): forwarding host port 63860 to guest port 80
2025-04-16 18:55:40 (1928): Enabling remote desktop for VM.
2025-04-16 18:55:40 (1928): Required extension pack not installed, remote desktop not enabled.
2025-04-16 18:55:40 (1928): Enabling shared directory for VM.
2025-04-16 18:55:41 (1928): Starting VM using VBoxManage interface. (boinc_d10447f372d39110, slot#7)
2025-04-16 18:55:52 (1928): Successfully started VM. (PID = '5024')
2025-04-16 18:55:52 (1928): Reporting VM Process ID to BOINC.
2025-04-16 18:55:52 (1928): Guest Log: BIOS: VirtualBox 7.0.6
2025-04-16 18:55:52 (1928): Guest Log: CPUID EDX: 0x178bfbff
2025-04-16 18:55:52 (1928): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-16 18:55:52 (1928): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-16 18:55:52 (1928): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-16 18:55:52 (1928): Detected: Web Application Enabled (http://localhost:63860)
2025-04-16 18:55:52 (1928): Preference change detected
2025-04-16 18:55:52 (1928): Setting CPU throttle for VM. (75%)
2025-04-16 18:55:53 (1928): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-16 18:55:54 (1928): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-16 18:55:54 (1928): Guest Log: BIOS: Booting from Hard Disk...
2025-04-16 18:55:58 (1928): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-16 18:55:58 (1928): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-16 18:55:58 (1928): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-16 18:56:14 (1928): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-16 18:56:14 (1928): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-16 18:56:48 (1928): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-16 18:56:48 (1928): Guest Log: 00:00:00.000359 main     Log opened 2025-04-16T18:56:46.344485000Z
2025-04-16 18:56:48 (1928): Guest Log: 00:00:00.000593 main     OS Product: Linux
2025-04-16 18:56:48 (1928): Guest Log: 00:00:00.000658 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-16 18:56:48 (1928): Guest Log: 00:00:00.000770 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-16 18:56:48 (1928): Guest Log: 00:00:00.000858 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-16 18:56:48 (1928): Guest Log: 00:00:00.000860 main     Process ID: 1314
2025-04-16 18:56:48 (1928): Guest Log: 00:00:00.000860 main     Package type: LINUX_64BITS_GENERIC
2025-04-16 18:56:48 (1928): Guest Log: 00:00:00.002555 main     5.2.32 r132073 started. Verbose level = 0
2025-04-16 18:56:49 (1928): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-16 18:56:49 (1928): Guest Log: [INFO] Mounting shared directory
2025-04-16 18:56:49 (1928): Guest Log: [INFO] Checking for init_data.xml
2025-04-16 18:56:54 (1928): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-16 18:56:54 (1928): Guest Log: [INFO] Detected branch: prod
2025-04-16 18:56:54 (1928): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-16 18:56:54 (1928): Guest Log: Copying input files
2025-04-16 18:56:58 (1928): Guest Log: 00:00:10.018119 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 412 020 914 000ns (GuestNow=1 744 844 218 380 380 000 ns GuestLast=1 744 829 806 359 466 000 ns fSetTimeLastLoop=true )
2025-04-16 18:56:59 (1928): Guest Log: Copied input files into RunAtlas.
2025-04-16 18:56:59 (1928): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-16 18:56:59 (1928): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-16 18:56:59 (1928): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-16 18:56:59 (1928): Guest Log: Further information can be found at the LHC@home message board.
2025-04-16 18:57:15 (1928): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-16 18:57:17 (1928): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-16 18:57:17 (1928): Guest Log: 2.6.3.0 1595 0 32096 144941 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-16 18:57:25 (1928): Guest Log: copied the webapp to /var/www
2025-04-16 18:57:25 (1928): Guest Log: ATHENA_PROC_NUMBER=7
2025-04-16 18:57:25 (1928): Guest Log: ATHENA_CORE_NUMBER=7
2025-04-16 18:57:26 (1928): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-16 18:57:26 (1928): Guest Log:  *** Starting ATLAS job. (PandaID=6604386832 taskID=44075483) ***
2025-04-16 19:11:03 (1928): Guest Log:  *** Job finished ***
2025-04-16 19:11:03 (1928): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:26,328 | INFO     | [payload] failed_post thread has finished
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:27,277 | INFO     | [job] queue monitor thread has finished
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:27,356 | INFO     | [data] queue_monitor thread has finished
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:28,439 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172184332096)>', '<ExcThread(monitor, started 140171601233664)>']
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:29,374 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:29,375 | INFO     | [monitor] control thread has ended
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:33,446 | INFO     | all workflow threads have been joined
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:33,447 | INFO     | end of generic workflow (traces error code: 0)
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:33,448 | INFO     | traces error code: 0
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:33,448 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:33,862 [wrapper] ==== pilot stdout END ====
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:33,887 [wrapper] ==== wrapper stdout RESUME ====
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:33,911 [wrapper] pilotpid: 5959
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:33,934 [wrapper] Pilot exit status: 0
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:34,077 [wrapper] pandaids: 6604386832
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:34,167 [wrapper] cleanup supervisor_pilot  5965 5960
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:34,184 [wrapper] Test setup, not cleaning
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:34,200 [wrapper] apfmon messages muted
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:34,217 [wrapper] ==== wrapper stdout END ====
2025-04-16 19:11:03 (1928): Guest Log: 2025-04-16 23:09:34,233 [wrapper] ==== wrapper stderr END ====
2025-04-16 19:11:03 (1928): Guest Log:  *** Error codes and diagnostics ***
2025-04-16 19:11:03 (1928): Guest Log:     "exeErrorCode": 65,
2025-04-16 19:11:03 (1928): Guest Log:     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-04-16 19:11:03 (1928): Guest Log:     "pilotErrorCode": 1305,
2025-04-16 19:11:03 (1928): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
2025-04-16 19:11:03 (1928): Guest Log:  *** Listing of results directory ***
2025-04-16 19:11:03 (1928): Guest Log: total 4156
2025-04-16 19:11:03 (1928): Guest Log: -rw-r--r--. 1 atlas atlas  495897 Apr 16 18:53 pilot3.tar.gz
2025-04-16 19:11:03 (1928): Guest Log: -rw-r--r--. 1 atlas atlas    5111 Apr 16 19:00 queuedata.json
2025-04-16 19:11:03 (1928): Guest Log: -rwx------. 1 atlas atlas   37140 Apr 16 19:01 runpilot2-wrapper.sh
2025-04-16 19:11:03 (1928): Guest Log: -rwxr-xr-x. 1 atlas atlas  508890 Apr 16 22:56 input.tar.gz
2025-04-16 19:11:03 (1928): Guest Log: -rwxr-xr-x. 1 atlas atlas    6102 Apr 16 22:56 init_data.xml
2025-04-16 19:11:03 (1928): Guest Log: -rwxr-xr-x. 1 atlas atlas   17569 Apr 16 22:56 start_atlas.sh
2025-04-16 19:11:03 (1928): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Apr 16 22:56 EVNT.44075481._001743.pool.root.1 -> /data/./ATLAS.root_0
2025-04-16 19:11:03 (1928): Guest Log: -rw-r--r--. 1 atlas atlas    2579 Apr 16 22:57 pandaJob.out
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas     424 Apr 16 22:57 setup.sh.local
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas  986560 Apr 16 22:58 agis_schedconf.cvmfs.json
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas 1603529 Apr 16 22:58 agis_ddmendpoints.agis.ALL.json
2025-04-16 19:11:03 (1928): Guest Log: drwx------. 4 atlas atlas    4096 Apr 16 22:58 pilot3
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas   51765 Apr 16 23:07 log.44075483._044557.job.log.tgz.1
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas      95 Apr 16 23:08 pilot_heartbeat.json
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas    8131 Apr 16 23:09 heartbeat.json
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas    4722 Apr 16 23:09 pilotlog.txt
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas  195126 Apr 16 23:09 log.44075483._044557.job.log.1
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas     188 Apr 16 23:09 output.list
2025-04-16 19:11:03 (1928): Guest Log: -rw-r--r--. 1 atlas atlas     620 Apr 16 23:09 runtime_log
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas  266240 Apr 16 23:09 result.tar.gz
2025-04-16 19:11:03 (1928): Guest Log: -rw-------. 1 atlas atlas     647 Apr 16 23:09 yOfNDmOCNP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmQy2KDmWFbgQn.diag
2025-04-16 19:11:03 (1928): Guest Log: -rw-r--r--. 1 atlas atlas   10794 Apr 16 23:09 runtime_log.err
2025-04-16 19:11:03 (1928): Guest Log: Looking for outputfile HITS.44075483._044557.pool.root.1
2025-04-16 19:11:03 (1928): Guest Log: No HITS file was produced
2025-04-16 19:11:04 (1928): Guest Log: Successfully finished the ATLAS job!
2025-04-16 19:11:04 (1928): Guest Log: Copying the results back to the shared directory!
2025-04-16 19:11:04 (1928): Guest Log:  *** Contents of shared directory: ***
2025-04-16 19:11:04 (1928): Guest Log: total 219940
2025-04-16 19:11:04 (1928): Guest Log: -rwxrwxrwx. 1 root root 224409358 Apr 16 22:55 ATLAS.root_0
2025-04-16 19:11:04 (1928): Guest Log: -rwxrwxrwx. 1 root root      6102 Apr 16 22:55 init_data.xml
2025-04-16 19:11:04 (1928): Guest Log: -rwxrwxrwx. 1 root root    508890 Apr 16 21:43 input.tar.gz
2025-04-16 19:11:04 (1928): Guest Log: -rwxrwxrwx. 1 root root    266240 Apr 16 23:11 result.tar.gz
2025-04-16 19:11:04 (1928): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 16 21:43 start_atlas.sh
2025-04-16 19:11:04 (1928): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-16 19:11:04 (1928): VM Completion File Detected.
2025-04-16 19:11:04 (1928): Powering off VM.
2025-04-16 19:11:06 (1928): Successfully stopped VM.
2025-04-16 19:11:06 (1928): Deregistering VM. (boinc_d10447f372d39110, slot#7)
2025-04-16 19:11:06 (1928): Removing network bandwidth throttle group from VM.
2025-04-16 19:11:06 (1928): Removing VM from VirtualBox.
19:11:12 (1928): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN