Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 02:29:18 (21284): Detected: vboxwrapper 26206
2025-04-17 02:29:18 (21284): Detected: BOINC client v8.0.2
2025-04-17 02:29:19 (21284): Detected: VirtualBox VboxManage Interface (Version: 7.0.22)
2025-04-17 02:29:19 (21284): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 02:29:20 (21284): Create VM. (boinc_bab1a2c4224d9002, slot#10)
2025-04-17 02:29:20 (21284): Setting Memory Size for VM. (4800MB)
2025-04-17 02:29:20 (21284): Setting CPU Count for VM. (8)
2025-04-17 02:29:21 (21284): Setting Chipset Options for VM.
2025-04-17 02:29:21 (21284): Setting Graphics Controller Options for VM.
2025-04-17 02:29:21 (21284): Setting Boot Options for VM.
2025-04-17 02:29:21 (21284): Setting Network Configuration for NAT.
2025-04-17 02:29:22 (21284): Enabling VM Network Access.
2025-04-17 02:29:22 (21284): Disabling USB Support for VM.
2025-04-17 02:29:22 (21284): Disabling COM Port Support for VM.
2025-04-17 02:29:22 (21284): Disabling LPT Port Support for VM.
2025-04-17 02:29:23 (21284): Disabling Audio Support for VM.
2025-04-17 02:29:23 (21284): Disabling Clipboard Support for VM.
2025-04-17 02:29:23 (21284): Disabling Drag and Drop Support for VM.
2025-04-17 02:29:23 (21284): Adding storage controller(s) to VM.
2025-04-17 02:29:24 (21284): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 02:29:24 (21284): Adding VirtualBox Guest Additions to VM.
2025-04-17 02:29:24 (21284): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 02:29:25 (21284): forwarding host port 64413 to guest port 80
2025-04-17 02:29:25 (21284): Enabling remote desktop for VM.
2025-04-17 02:29:25 (21284): Enabling shared directory for VM.
2025-04-17 02:29:26 (21284): Starting VM using VBoxManage interface. (boinc_bab1a2c4224d9002, slot#10)
2025-04-17 02:29:30 (21284): Successfully started VM. (PID = '26700')
2025-04-17 02:29:30 (21284): Reporting VM Process ID to BOINC.
2025-04-17 02:29:30 (21284): Guest Log: BIOS: VirtualBox 7.0.22
2025-04-17 02:29:30 (21284): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 02:29:30 (21284): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 02:29:30 (21284): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 02:29:30 (21284): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 02:29:30 (21284): Detected: Web Application Enabled (http://localhost:64413)
2025-04-17 02:29:30 (21284): Detected: Remote Desktop Enabled (localhost:64414)
2025-04-17 02:29:30 (21284): Preference change detected
2025-04-17 02:29:30 (21284): Setting CPU throttle for VM. (90%)
2025-04-17 02:29:31 (21284): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 02:29:32 (21284): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 02:29:32 (21284): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 02:29:35 (21284): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 02:29:35 (21284): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 02:29:35 (21284): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 02:29:40 (21284): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 02:29:40 (21284): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 02:29:45 (21284): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 02:29:45 (21284): Guest Log: 00:00:00.000154 main     Log opened 2025-04-17T02:29:43.795090000Z
2025-04-17 02:29:45 (21284): Guest Log: 00:00:00.000245 main     OS Product: Linux
2025-04-17 02:29:45 (21284): Guest Log: 00:00:00.000276 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 02:29:45 (21284): Guest Log: 00:00:00.000301 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 02:29:45 (21284): Guest Log: 00:00:00.000335 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 02:29:45 (21284): Guest Log: 00:00:00.000336 main     Process ID: 1364
2025-04-17 02:29:45 (21284): Guest Log: 00:00:00.000336 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 02:29:45 (21284): Guest Log: 00:00:00.001014 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 02:29:45 (21284): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 02:29:45 (21284): Guest Log: [INFO] Mounting shared directory
2025-04-17 02:29:45 (21284): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 02:29:47 (21284): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 02:29:47 (21284): Guest Log: [INFO] Detected branch: prod
2025-04-17 02:29:47 (21284): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 02:29:47 (21284): Guest Log: Copying input files
2025-04-17 02:29:48 (21284): Guest Log: Copied input files into RunAtlas.
2025-04-17 02:29:48 (21284): Guest Log: Detected user-configured HTTP proxy at http://proxy.kippola.kiulu10clients.net:3128 - will set in /etc/cvmfs/default.local
2025-04-17 02:29:55 (21284): Guest Log: 00:00:10.024868 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 402 475 000ns (GuestNow=1 744 846 195 394 646 000 ns GuestLast=1 744 856 983 797 121 000 ns fSetTimeLastLoop=true )
2025-04-17 02:29:55 (21284): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 02:29:56 (21284): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 02:29:56 (21284): Guest Log: 2.6.3.0 1639 0 31660 144942 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.123.108:3128 1
2025-04-17 02:29:56 (21284): Guest Log: copied the webapp to /var/www
2025-04-17 02:29:56 (21284): Guest Log: ATHENA_PROC_NUMBER=8
2025-04-17 02:29:56 (21284): Guest Log: ATHENA_CORE_NUMBER=8
2025-04-17 02:29:56 (21284): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 02:29:56 (21284): Guest Log:  *** Starting ATLAS job. (PandaID=6604382998 taskID=44075483) ***
2025-04-17 02:31:42 (21284): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 02:32:02 (21284): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 02:46:13 (21284): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 02:46:33 (21284): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 02:49:13 (21284): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 02:49:33 (21284): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 02:56:04 (21284): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 02:56:24 (21284): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 03:06:35 (21284): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 03:06:55 (21284): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 03:14:37 (21284): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 03:14:57 (21284): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 03:22:17 (21284): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 03:22:37 (21284): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 03:31:18 (21284): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 03:31:38 (21284): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 03:31:49 (21284): VM state change detected. (old = 'running', new = 'paused')
2025-04-17 03:32:09 (21284): VM state change detected. (old = 'paused', new = 'running')
2025-04-17 03:43:38 (21284): Guest Log:  *** Job finished ***
2025-04-17 03:43:38 (21284): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:28,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:28,861 | INFO     | [data] copytool_out thread has finished
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:32,287 | INFO     | [data] queue_monitor thread has finished
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:33,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140717107472192)>', '<ExcThread(monitor, started 140716500031232)>']
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:34,342 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:34,342 | INFO     | [monitor] control thread has ended
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,428 | INFO     | all workflow threads have been joined
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,428 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,428 | INFO     | traces error code: 0
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,428 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,519 [wrapper] ==== pilot stdout END ====
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,525 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,531 [wrapper] pilotpid: 5994
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,538 [wrapper] Pilot exit status: 0
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,564 [wrapper] pandaids: 6604382998
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,597 [wrapper] cleanup supervisor_pilot 21741 5995
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,605 [wrapper] Test setup, not cleaning
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,610 [wrapper] apfmon messages muted
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,616 [wrapper] ==== wrapper stdout END ====
2025-04-17 03:43:38 (21284): Guest Log: 2025-04-17 00:40:38,622 [wrapper] ==== wrapper stderr END ====
2025-04-17 03:43:38 (21284): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 03:43:38 (21284): Guest Log:     "exeErrorCode": 0,
2025-04-17 03:43:38 (21284): Guest Log:     "exeErrorDiag": "",
2025-04-17 03:43:38 (21284): Guest Log:     "pilotErrorCode": 0,
2025-04-17 03:43:38 (21284): Guest Log:     "pilotErrorDiag": "",
2025-04-17 03:43:38 (21284): Guest Log:  *** Listing of results directory ***
2025-04-17 03:43:38 (21284): Guest Log: total 204180
2025-04-17 03:43:38 (21284): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 16 18:53 pilot3.tar.gz
2025-04-17 03:43:38 (21284): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 16 18:56 queuedata.json
2025-04-17 03:43:38 (21284): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 16 18:57 runpilot2-wrapper.sh
2025-04-17 03:43:38 (21284): Guest Log: -rwxr-xr-x. 1 atlas atlas      9263 Apr 16 23:29 init_data.xml
2025-04-17 03:43:38 (21284): Guest Log: -rwxr-xr-x. 1 atlas atlas    508887 Apr 16 23:29 input.tar.gz
2025-04-17 03:43:38 (21284): Guest Log: -rwxr-xr-x. 1 atlas atlas     17569 Apr 16 23:29 start_atlas.sh
2025-04-17 03:43:38 (21284): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 16 23:29 EVNT.44075481._001727.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 03:43:38 (21284): Guest Log: -rw-r--r--. 1 atlas atlas      2576 Apr 16 23:29 pandaJob.out
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas       479 Apr 16 23:29 setup.sh.local
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas    986560 Apr 16 23:30 agis_schedconf.cvmfs.json
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas   1603529 Apr 16 23:30 agis_ddmendpoints.agis.ALL.json
2025-04-17 03:43:38 (21284): Guest Log: drwx------. 4 atlas atlas      4096 Apr 16 23:30 pilot3
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas 203970529 Apr 17 00:39 HITS.44075483._044136.pool.root.1
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas        95 Apr 17 00:39 pilot_heartbeat.json
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas      1029 Apr 17 00:40 memory_monitor_summary.json
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas    280426 Apr 17 00:40 log.44075483._044136.job.log.tgz.1
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas      7711 Apr 17 00:40 heartbeat.json
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 17 00:40 pilotlog.txt
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas    387346 Apr 17 00:40 log.44075483._044136.job.log.1
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 00:40 output.list
2025-04-17 03:43:38 (21284): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 00:40 runtime_log
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas    686080 Apr 17 00:40 result.tar.gz
2025-04-17 03:43:38 (21284): Guest Log: -rw-r--r--. 1 atlas atlas     11409 Apr 17 00:40 runtime_log.err
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas       650 Apr 17 00:40 kQnKDmJ8MP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDm9w2KDmNXB15m.diag
2025-04-17 03:43:38 (21284): Guest Log: Looking for outputfile HITS.44075483._044136.pool.root.1
2025-04-17 03:43:38 (21284): Guest Log: HITS file was successfully produced
2025-04-17 03:43:38 (21284): Guest Log: -rw-------. 1 atlas atlas 203970529 Apr 17 00:39 /home/atlas/RunAtlas/HITS.44075483._044136.pool.root.1
2025-04-17 03:43:39 (21284): Guest Log: Successfully finished the ATLAS job!
2025-04-17 03:43:39 (21284): Guest Log: Copying the results back to the shared directory!
2025-04-17 03:43:39 (21284): Guest Log:  *** Contents of shared directory: ***
2025-04-17 03:43:39 (21284): Guest Log: total 417488
2025-04-17 03:43:39 (21284): Guest Log: -rwxrwxrwx. 1 root root 222299263 Apr 16 23:29 ATLAS.root_0
2025-04-17 03:43:39 (21284): Guest Log: -rwxrwxrwx. 1 root root 203970529 Apr 17  2025 HITS.pool.root.1
2025-04-17 03:43:39 (21284): Guest Log: -rwxrwxrwx. 1 root root      9263 Apr 16 23:29 init_data.xml
2025-04-17 03:43:39 (21284): Guest Log: -rwxrwxrwx. 1 root root    508887 Apr 16 21:33 input.tar.gz
2025-04-17 03:43:39 (21284): Guest Log: -rwxrwxrwx. 1 root root    686080 Apr 17  2025 result.tar.gz
2025-04-17 03:43:39 (21284): Guest Log: -rwxrwxrwx. 1 root root     17569 Apr 16 21:33 start_atlas.sh
2025-04-17 03:43:39 (21284): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 03:43:39 (21284): VM Completion File Detected.
2025-04-17 03:43:39 (21284): Powering off VM.
2025-04-17 03:43:40 (21284): Successfully stopped VM.
2025-04-17 03:43:40 (21284): Deregistering VM. (boinc_bab1a2c4224d9002, slot#10)
2025-04-17 03:43:40 (21284): Removing network bandwidth throttle group from VM.
2025-04-17 03:43:40 (21284): Removing VM from VirtualBox.
03:43:45 (21284): called boinc_finish(0)

</stderr_txt>
]]>

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