Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:20:51 (3785490): wrapper (7.7.26015): starting
01:20:51 (3785490): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 01:20:51] Arguments: --nthreads 12
[2025-04-17 01:20:51] Threads: 12
[2025-04-17 01:20:51] Checking for CVMFS
[2025-04-17 01:20:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 01:20:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 01:20:52] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 01:20:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 01:20:52] 2.11.5.0 2237 19651 318896 144954 1 275 22828617 45568000 8770 130560 0 152877245 99.703 156682152 0 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-17 01:20:52] CVMFS is ok
[2025-04-17 01:20:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 01:20:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 01:20:52] Further information can be found at the LHC@home message board.
[2025-04-17 01:20:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 01:20:52] Checking for apptainer binary...
[2025-04-17 01:20:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 01:20:52] Running /usr/bin/apptainer --version
[2025-04-17 01:20:52] apptainer version 1.3.5-1.el9
[2025-04-17 01:20:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 01:20:52] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0061.triumf.lcg
[2025-04-17 01:20:52] apptainer works
[2025-04-17 01:20:52] Set ATHENA_PROC_NUMBER=12
[2025-04-17 01:20:52] Set ATHENA_CORE_NUMBER=12
[2025-04-17 01:20:52] Starting ATLAS job with PandaID=6604151227
[2025-04-17 01:20:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 03:36:52]  *** The last 200 lines of the pilot log: ***
[2025-04-17 03:36:52] 2025-04-17 10:36:35,165 | INFO     | sum of square deviations: 729486862.2556392
[2025-04-17 03:36:52] 2025-04-17 10:36:35,165 | INFO     | sum of deviations: 43061964576.93988
[2025-04-17 03:36:52] 2025-04-17 10:36:35,165 | INFO     | mean x: 1744882108.586466
[2025-04-17 03:36:52] 2025-04-17 10:36:35,165 | INFO     | mean y: 2672490.7443609023
[2025-04-17 03:36:52] 2025-04-17 10:36:35,166 | INFO     | -- intersect: -102998567748.93993
[2025-04-17 03:36:52] 2025-04-17 10:36:35,166 | INFO     | intersect: -102998567748.93993
[2025-04-17 03:36:52] 2025-04-17 10:36:35,166 | INFO     | chi2: 4.916387057103745
[2025-04-17 03:36:52] 2025-04-17 10:36:35,166 | INFO     | sum of square deviations: 650282569.6796875
[2025-04-17 03:36:52] 2025-04-17 10:36:35,166 | INFO     | sum of deviations: 41962410797.421875
[2025-04-17 03:36:52] 2025-04-17 10:36:35,166 | INFO     | mean x: 1744881956.1015625
[2025-04-17 03:36:52] 2025-04-17 10:36:35,167 | INFO     | mean y: 2670372.890625
[2025-04-17 03:36:52] 2025-04-17 10:36:35,167 | INFO     | -- intersect: -112593694421.27698
[2025-04-17 03:36:52] 2025-04-17 10:36:35,167 | INFO     | intersect: -112593694421.27698
[2025-04-17 03:36:52] 2025-04-17 10:36:35,167 | INFO     | chi2: 4.921824333334905
[2025-04-17 03:36:52] 2025-04-17 10:36:35,167 | INFO     | current chi2=4.921824333334905 (change=-0.1105949586150651 %)
[2025-04-17 03:36:52] 2025-04-17 10:36:35,167 | INFO     | right removable region: 127
[2025-04-17 03:36:52] 2025-04-17 10:36:35,167 | INFO     | sum of square deviations: 650242980.46875
[2025-04-17 03:36:52] 2025-04-17 10:36:35,168 | INFO     | sum of deviations: 8533632710.671875
[2025-04-17 03:36:52] 2025-04-17 10:36:35,168 | INFO     | mean x: 1744882261.109375
[2025-04-17 03:36:52] 2025-04-17 10:36:35,168 | INFO     | mean y: 2738661.5234375
[2025-04-17 03:36:52] 2025-04-17 10:36:35,168 | INFO     | -- intersect: -22896677075.252323
[2025-04-17 03:36:52] 2025-04-17 10:36:35,168 | INFO     | intersect: -22896677075.252323
[2025-04-17 03:36:52] 2025-04-17 10:36:35,168 | INFO     | chi2: 2.3020079929554327
[2025-04-17 03:36:52] 2025-04-17 10:36:35,168 | INFO     | current chi2=2.3020079929554327 (change=53.17683562710478 %)
[2025-04-17 03:36:52] 2025-04-17 10:36:35,168 | INFO     | sum of square deviations: 576952698.5365875
[2025-04-17 03:36:52] 2025-04-17 10:36:35,168 | INFO     | sum of deviations: -16988259774.731707
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | mean x: 1744882413.6341465
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | mean y: 2791792.9837398375
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | -- intersect: 51380514428.417366
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | intersect: 51380514428.417366
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | chi2: 0.8978582704645787
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | current chi2=0.8978582704645787 (change=60.99673531924347 %)
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | sum of square deviations: 509383453.9406776
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | sum of deviations: -31935187870.07627
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | mean x: 1744882566.161017
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | mean y: 2825109.63559322
[2025-04-17 03:36:52] 2025-04-17 10:36:35,169 | INFO     | -- intersect: 109396155675.22232
[2025-04-17 03:36:52] 2025-04-17 10:36:35,170 | INFO     | intersect: 109396155675.22232
[2025-04-17 03:36:52] 2025-04-17 10:36:35,170 | INFO     | chi2: 0.19656262854959147
[2025-04-17 03:36:52] 2025-04-17 10:36:35,170 | INFO     | current chi2=0.19656262854959147 (change=78.10761063125429 %)
[2025-04-17 03:36:52] 2025-04-17 10:36:35,170 | INFO     | sum of square deviations: 447324279.2212397
[2025-04-17 03:36:52] 2025-04-17 10:36:35,170 | INFO     | sum of deviations: -28264382074.212418
[2025-04-17 03:36:52] 2025-04-17 10:36:35,170 | INFO     | mean x: 1744882718.6637168
[2025-04-17 03:36:52] 2025-04-17 10:36:35,170 | INFO     | mean y: 2816048.3628318585
[2025-04-17 03:36:52] 2025-04-17 10:36:35,170 | INFO     | -- intersect: 110254000984.85016
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | intersect: 110254000984.85016
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | chi2: 0.1956323560485504
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | current chi2=0.1956323560485504 (change=0.4732702792516726 %)
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | left removable region: 40
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | sum of square deviations: 204163376.9195406
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | sum of deviations: -7456206424.310343
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | mean x: 1744883145.597701
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | mean y: 2753874.4482758623
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | -- intersect: 63727252930.92524
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | intersect: 63727252930.92524
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | chi2: 0.12216199600345216
[2025-04-17 03:36:52] 2025-04-17 10:36:35,171 | INFO     | -- intersect: 63727252930.92524
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | current memory leak: -36.52 B/s (using 87 data points, chi2=0.12)
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | ..............................
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | . Timing measurements:
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | . get job = 0 s
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | . initial setup = 2 s
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | . payload setup = 3 s
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | . stage-in = 0 s
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | . payload execution = 8094 s
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | . stage-out = 2 s
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | . log creation = 0 s
[2025-04-17 03:36:52] 2025-04-17 10:36:35,172 | INFO     | ..............................
[2025-04-17 03:36:52] 2025-04-17 10:36:35,231 | INFO     | 
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | job summary report
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | --------------------------------------------------
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | PanDA job id: 6604151227
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | task id: 44075483
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | errors: (none)
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | pilot state: finished 
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | transexitcode: 0
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | exeerrorcode: 0
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | exeerrordiag: 
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | exitcode: 0
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | exitmsg: OK
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | cpuconsumptiontime: 27271 s
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | nevents: 400
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | neventsw: 0
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | pid: 3795402
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | pgrp: 3795402
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | corecount: 12
[2025-04-17 03:36:52] 2025-04-17 10:36:35,232 | INFO     | event service: False
[2025-04-17 03:36:52] 2025-04-17 10:36:35,233 | INFO     | sizes: {0: 2426821, 1: 2426821, 3: 2427055, 11: 2427083, 8103: 2454797, 8106: 2463732, 8107: 2463916, 8121: 2464086}
[2025-04-17 03:36:52] 2025-04-17 10:36:35,233 | INFO     | --------------------------------------------------
[2025-04-17 03:36:52] 2025-04-17 10:36:35,233 | INFO     | 
[2025-04-17 03:36:52] 2025-04-17 10:36:35,233 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-17 03:36:52] 2025-04-17 10:36:35,258 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,258 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,258 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,258 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,258 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,258 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,259 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 03:36:52] 2025-04-17 10:36:35,260 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,260 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 03:36:52] 2025-04-17 10:36:35,260 | INFO     | job 6604151227 has completed (purged errors)
[2025-04-17 03:36:52] 2025-04-17 10:36:35,260 | INFO     | overall cleanup function is called
[2025-04-17 03:36:52] 2025-04-17 10:36:36,268 | INFO     | --- collectZombieJob: --- 10, [3795402]
[2025-04-17 03:36:52] 2025-04-17 10:36:36,269 | INFO     | zombie collector waiting for pid 3795402
[2025-04-17 03:36:52] 2025-04-17 10:36:36,269 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 03:36:52] 2025-04-17 10:36:36,269 | INFO     | collected zombie processes
[2025-04-17 03:36:52] 2025-04-17 10:36:36,269 | INFO     | will attempt to kill all subprocesses of pid=3795402
[2025-04-17 03:36:52] 2025-04-17 10:36:37,093 | INFO     | process IDs to be killed: [3795402] (in reverse order)
[2025-04-17 03:36:52] 2025-04-17 10:36:37,205 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 03:36:52] 2025-04-17 10:36:37,205 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 03:36:52] 2025-04-17 10:36:37,230 | INFO     | did not find any defunct processes belonging to 3795402
[2025-04-17 03:36:52] 2025-04-17 10:36:37,239 | INFO     | did not find any defunct processes belonging to 3795402
[2025-04-17 03:36:52] 2025-04-17 10:36:37,239 | INFO     | ready for new job
[2025-04-17 03:36:52] 2025-04-17 10:36:37,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 03:36:52] 2025-04-17 10:36:37,241 | INFO     | **************************************
[2025-04-17 03:36:52] 2025-04-17 10:36:37,241 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 03:36:52] 2025-04-17 10:36:37,241 | INFO     | **************************************
[2025-04-17 03:36:52] 2025-04-17 10:36:37,241 | INFO     | 
[2025-04-17 03:36:52] 2025-04-17 10:36:37,243 | INFO     | architecture information:
[2025-04-17 03:36:52] 2025-04-17 10:36:37,243 | INFO     | executing command: cat /etc/os-release
[2025-04-17 03:36:52] 2025-04-17 10:36:37,258 | INFO     | cat /etc/os-release:
[2025-04-17 03:36:52] NAME="CentOS Linux"
[2025-04-17 03:36:52] VERSION="7 (Core)"
[2025-04-17 03:36:52] ID="centos"
[2025-04-17 03:36:52] ID_LIKE="rhel fedora"
[2025-04-17 03:36:52] VERSION_ID="7"
[2025-04-17 03:36:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 03:36:52] ANSI_COLOR="0;31"
[2025-04-17 03:36:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 03:36:52] HOME_URL="https://www.centos.org/"
[2025-04-17 03:36:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 03:36:52] 
[2025-04-17 03:36:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 03:36:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 03:36:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 03:36:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 03:36:52] 
[2025-04-17 03:36:52] 2025-04-17 10:36:37,258 | INFO     | **************************************
[2025-04-17 03:36:52] 2025-04-17 10:36:37,762 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-17 03:36:52] 2025-04-17 10:36:37,802 | INFO     | sufficient remaining disk space (2079927042048 B)
[2025-04-17 03:36:52] 2025-04-17 10:36:37,802 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 03:36:52] 2025-04-17 10:36:37,802 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 03:36:52] 2025-04-17 10:36:37,802 | INFO     | update_server=False
[2025-04-17 03:36:52] 2025-04-17 10:36:37,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 03:36:52] 2025-04-17 10:36:38,143 | INFO     | all payload control threads have been joined
[2025-04-17 03:36:52] 2025-04-17 10:36:38,428 | INFO     | all job control threads have been joined
[2025-04-17 03:36:52] 2025-04-17 10:36:38,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 03:36:52] 2025-04-17 10:36:38,529 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 03:36:52] 2025-04-17 10:36:38,530 | INFO     | aborting loop
[2025-04-17 03:36:52] 2025-04-17 10:36:38,699 | INFO     | all data control threads have been joined
[2025-04-17 03:36:52] 2025-04-17 10:36:38,724 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 03:36:52] 2025-04-17 10:36:38,724 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 03:36:52] 2025-04-17 10:36:38,724 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 03:36:52] 2025-04-17 10:36:38,809 | INFO     | [job] retrieve thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:38,871 | INFO     | [data] copytool_in thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:38,871 | INFO     | [job] validate thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:39,149 | INFO     | [payload] control thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:39,372 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:39,434 | INFO     | [job] control thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:39,536 | INFO     | [job] job monitor thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:39,607 | INFO     | [payload] failed_post thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:39,705 | INFO     | [data] control thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:39,855 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:39,881 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:39,882 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:40,264 | INFO     | [payload] validate_post thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:40,266 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 03:36:52] 2025-04-17 10:36:40,465 | INFO     | [data] copytool_out thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:41,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 03:36:52] 2025-04-17 10:36:41,272 | INFO     | [job] queue monitor thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:45,028 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 03:36:52] 2025-04-17 10:36:46,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140528236590912)>', '<ExcThread(monitor, started 140527555041024)>']
[2025-04-17 03:36:52] 2025-04-17 10:36:46,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 03:36:52] 2025-04-17 10:36:46,776 | INFO     | [monitor] control thread has ended
[2025-04-17 03:36:52] 2025-04-17 10:36:51,723 | INFO     | all workflow threads have been joined
[2025-04-17 03:36:52] 2025-04-17 10:36:51,724 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 03:36:52] 2025-04-17 10:36:51,724 | INFO     | traces error code: 0
[2025-04-17 03:36:52] 2025-04-17 10:36:51,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 03:36:52] 2025-04-17 10:36:52,189 [wrapper] ==== pilot stdout END ====
[2025-04-17 03:36:52] 2025-04-17 10:36:52,191 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 03:36:52] 2025-04-17 10:36:52,193 [wrapper] pilotpid: 3789070
[2025-04-17 03:36:52] 2025-04-17 10:36:52,195 [wrapper] Pilot exit status: 0
[2025-04-17 03:36:52] 2025-04-17 10:36:52,233 [wrapper] pandaids: 6604151227
[2025-04-17 03:36:52] 2025-04-17 10:36:52,295 [wrapper] cleanup supervisor_pilot  442714 3789071
[2025-04-17 03:36:52] 2025-04-17 10:36:52,298 [wrapper] Test setup, not cleaning
[2025-04-17 03:36:52] 2025-04-17 10:36:52,303 [wrapper] apfmon messages muted
[2025-04-17 03:36:52] 2025-04-17 10:36:52,315 [wrapper] ==== wrapper stdout END ====
[2025-04-17 03:36:52] 2025-04-17 10:36:52,323 [wrapper] ==== wrapper stderr END ====
[2025-04-17 03:36:52]  *** Error codes and diagnostics ***
[2025-04-17 03:36:52]     "exeErrorCode": 0,
[2025-04-17 03:36:52]     "exeErrorDiag": "",
[2025-04-17 03:36:52]     "pilotErrorCode": 0,
[2025-04-17 03:36:52]     "pilotErrorDiag": "",
[2025-04-17 03:36:52]  *** Listing of results directory ***
[2025-04-17 03:36:52] total 413856
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc    495897 Apr 16 11:03 pilot3.tar.gz
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc      5111 Apr 16 11:05 queuedata.json
[2025-04-17 03:36:52] -rwx------. 1 boinc boinc     37140 Apr 16 11:06 runpilot2-wrapper.sh
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc       100 Apr 17 01:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 03:36:52] -rwxr-xr-x. 1 boinc boinc      7986 Apr 17 01:20 run_atlas
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc       105 Apr 17 01:20 job.xml
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc      6602 Apr 17 01:20 init_data.xml
[2025-04-17 03:36:52] -rw-r--r--. 2 boinc boinc 224567130 Apr 17 01:20 EVNT.44075481._001707.pool.root.1
[2025-04-17 03:36:52] -rw-r--r--. 2 boinc boinc     17569 Apr 17 01:20 start_atlas.sh
[2025-04-17 03:36:52] drwxrwx--x. 2 boinc boinc      4096 Apr 17 01:20 shared
[2025-04-17 03:36:52] -rw-r--r--. 2 boinc boinc    508893 Apr 17 01:20 input.tar.gz
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc         0 Apr 17 01:20 boinc_lockfile
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc      2579 Apr 17 01:20 pandaJob.out
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc       424 Apr 17 01:20 setup.sh.local
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc    990239 Apr 17 01:20 agis_schedconf.cvmfs.json
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc   1618536 Apr 17 01:20 agis_ddmendpoints.agis.ALL.json
[2025-04-17 03:36:52] drwx------. 4 boinc boinc      4096 Apr 17 01:21 pilot3
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc 193119403 Apr 17 03:35 HITS.44075483._043588.pool.root.1
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc       530 Apr 17 03:35 boinc_task_state.xml
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc      1042 Apr 17 03:36 memory_monitor_summary.json
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc    407864 Apr 17 03:36 log.44075483._043588.job.log.tgz.1
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc        95 Apr 17 03:36 pilot_heartbeat.json
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc        27 Apr 17 03:36 wrapper_checkpoint.txt
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc      8192 Apr 17 03:36 boinc_mmap_file
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc      7727 Apr 17 03:36 heartbeat.json
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc      4352 Apr 17 03:36 pilotlog.txt
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc    711659 Apr 17 03:36 log.44075483._043588.job.log.1
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc       357 Apr 17 03:36 output.list
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc       620 Apr 17 03:36 runtime_log
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc   1136640 Apr 17 03:36 result.tar.gz
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc     11144 Apr 17 03:36 runtime_log.err
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc       659 Apr 17 03:36 1Y7KDmNKMP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmWpaLDmTEbZAn.diag
[2025-04-17 03:36:52] -rw-r--r--. 1 boinc boinc     20952 Apr 17 03:36 stderr.txt
[2025-04-17 03:36:52] HITS file was successfully produced:
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc 193119403 Apr 17 03:35 shared/HITS.pool.root.1
[2025-04-17 03:36:52]  *** Contents of shared directory: ***
[2025-04-17 03:36:52] total 409540
[2025-04-17 03:36:52] -rw-r--r--. 2 boinc boinc 224567130 Apr 17 01:20 ATLAS.root_0
[2025-04-17 03:36:52] -rw-r--r--. 2 boinc boinc     17569 Apr 17 01:20 start_atlas.sh
[2025-04-17 03:36:52] -rw-r--r--. 2 boinc boinc    508893 Apr 17 01:20 input.tar.gz
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc 193119403 Apr 17 03:35 HITS.pool.root.1
[2025-04-17 03:36:52] -rw-------. 1 boinc boinc   1136640 Apr 17 03:36 result.tar.gz
03:36:54 (3785490): run_atlas exited; CPU time 27382.263776
03:36:54 (3785490): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN