Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:23:49 (1709651): wrapper (7.7.26015): starting
16:23:49 (1709651): wrapper: running run_atlas (--nthreads 8)
[2025-04-16 16:23:49] Arguments: --nthreads 8
[2025-04-16 16:23:49] Threads: 8
[2025-04-16 16:23:49] Checking for CVMFS
[2025-04-16 16:23:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 16:23:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 16:23:51] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 16:23:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 16:23:52] 2.12.6.0 2301809 68778 158980 144937 3 297 22266847 32935936 24204 130560 0 45912938 99.689 41714298 8858 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-16 16:23:52] CVMFS is ok
[2025-04-16 16:23:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 16:23:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 16:23:52] Further information can be found at the LHC@home message board.
[2025-04-16 16:23:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 16:23:52] Checking for apptainer binary...
[2025-04-16 16:23:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 16:23:52] Running /usr/bin/apptainer --version
[2025-04-16 16:23:53] apptainer version 1.4.0-1.el9
[2025-04-16 16:23:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 16:23:54] c6-12-25-2.aglt2.org
[2025-04-16 16:23:54] apptainer works
[2025-04-16 16:23:54] Set ATHENA_PROC_NUMBER=8
[2025-04-16 16:23:54] Set ATHENA_CORE_NUMBER=8
[2025-04-16 16:23:55] Starting ATLAS job with PandaID=6604150481
[2025-04-16 16:23:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 12:36:27]  *** The last 200 lines of the pilot log: ***
[2025-04-17 12:36:27] 2025-04-17 16:35:35,523 | INFO     | monitor loop #2498: job 0:6604150481 is in state 'finished'
[2025-04-17 12:36:27] 2025-04-17 16:35:35,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 12:36:27] 2025-04-17 16:35:38,029 | INFO     | monitor loop #2499: job 0:6604150481 is in state 'finished'
[2025-04-17 12:36:27] 2025-04-17 16:35:38,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 12:36:27] 2025-04-17 16:35:38,977 | INFO     | 72638s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-17 12:36:27] 2025-04-17 16:35:40,535 | INFO     | monitor loop #2500: job 0:6604150481 is in state 'finished'
[2025-04-17 12:36:27] 2025-04-17 16:35:40,535 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 12:36:27] 2025-04-17 16:35:43,041 | INFO     | monitor loop #2501: job 0:6604150481 is in state 'finished'
[2025-04-17 12:36:27] 2025-04-17 16:35:43,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 12:36:27] 2025-04-17 16:35:45,546 | INFO     | monitor loop #2502: job 0:6604150481 is in state 'finished'
[2025-04-17 12:36:27] 2025-04-17 16:35:45,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 12:36:27] 2025-04-17 16:35:47,677 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-17 12:36:27] 2025-04-17 16:35:47,678 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6604150481/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 12:36:27] 2025-04-17 16:35:47,679 | INFO     | extracted standard info from prmon json
[2025-04-17 12:36:27] 2025-04-17 16:35:47,680 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 12:36:27] 2025-04-17 16:35:47,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 12:36:27] 2025-04-17 16:35:47,704 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 12:36:27] 2025-04-17 16:35:47,705 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 12:36:27] 2025-04-17 16:35:48,031 | INFO     | fitting pss+swap vs Time
[2025-04-17 12:36:27] 2025-04-17 16:35:48,052 | INFO     | sum of square deviations: 518606603112.0509
[2025-04-17 12:36:27] 2025-04-17 16:35:48,074 | INFO     | monitor loop #2503: job 0:6604150481 is in state 'finished'
[2025-04-17 12:36:27] 2025-04-17 16:35:48,074 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 12:36:27] 2025-04-17 16:35:48,477 | INFO     | sum of deviations: 1143189196245.5076
[2025-04-17 12:36:27] 2025-04-17 16:35:48,500 | INFO     | mean x: 1744871492.2392585
[2025-04-17 12:36:27] 2025-04-17 16:35:48,500 | INFO     | mean y: 2410011.5299073295
[2025-04-17 12:36:27] 2025-04-17 16:35:48,501 | INFO     | -- intersect: -3843893191.6973677
[2025-04-17 12:36:27] 2025-04-17 16:35:48,501 | INFO     | intersect: -3843893191.6973677
[2025-04-17 12:36:27] 2025-04-17 16:35:48,515 | INFO     | chi2: 16.890934218105578
[2025-04-17 12:36:27] 2025-04-17 16:35:48,543 | INFO     | sum of square deviations: 512081442270.8698
[2025-04-17 12:36:27] 2025-04-17 16:35:48,972 | INFO     | sum of deviations: 1520590687729.7239
[2025-04-17 12:36:27] 2025-04-17 16:35:48,973 | INFO     | mean x: 1744871339.747885
[2025-04-17 12:36:27] 2025-04-17 16:35:48,981 | INFO     | mean y: 2418830.19035533
[2025-04-17 12:36:27] 2025-04-17 16:35:48,981 | INFO     | -- intersect: -5178856825.379428
[2025-04-17 12:36:27] 2025-04-17 16:35:48,981 | INFO     | intersect: -5178856825.379428
[2025-04-17 12:36:27] 2025-04-17 16:35:49,002 | INFO     | chi2: 13.055771666915433
[2025-04-17 12:36:27] 2025-04-17 16:35:49,002 | INFO     | current chi2=13.055771666915433 (change=22.705449572346282 %)
[2025-04-17 12:36:27] 2025-04-17 16:35:49,002 | INFO     | right removable region: 1181
[2025-04-17 12:36:27] 2025-04-17 16:35:49,023 | INFO     | sum of square deviations: 512079965460.87
[2025-04-17 12:36:27] 2025-04-17 16:35:49,465 | INFO     | sum of deviations: 778521038534.2361
[2025-04-17 12:36:27] 2025-04-17 16:35:49,466 | INFO     | mean x: 1744871644.747885
[2025-04-17 12:36:27] 2025-04-17 16:35:49,466 | INFO     | mean y: 2418530.594754653
[2025-04-17 12:36:27] 2025-04-17 16:35:49,492 | INFO     | -- intersect: -2650329822.4002542
[2025-04-17 12:36:27] 2025-04-17 16:35:49,492 | INFO     | intersect: -2650329822.4002542
[2025-04-17 12:36:27] 2025-04-17 16:35:49,501 | INFO     | chi2: 13.276036653991614
[2025-04-17 12:36:27] 2025-04-17 16:35:49,501 | INFO     | current chi2=13.276036653991614 (change=21.401406917085232 %)
[2025-04-17 12:36:27] 2025-04-17 16:35:49,501 | INFO     | left removable region: 10
[2025-04-17 12:36:27] 2025-04-17 16:35:49,529 | INFO     | sum of square deviations: 497916343790.40247
[2025-04-17 12:36:27] 2025-04-17 16:35:49,981 | INFO     | sum of deviations: 949518911480.5344
[2025-04-17 12:36:27] 2025-04-17 16:35:49,982 | INFO     | mean x: 1744871614.265585
[2025-04-17 12:36:27] 2025-04-17 16:35:49,982 | INFO     | mean y: 2435788.7378309136
[2025-04-17 12:36:27] 2025-04-17 16:35:49,983 | INFO     | -- intersect: -3325007900.373457
[2025-04-17 12:36:27] 2025-04-17 16:35:49,983 | INFO     | intersect: -3325007900.373457
[2025-04-17 12:36:27] 2025-04-17 16:35:50,005 | INFO     | chi2: 6.634946808587046
[2025-04-17 12:36:27] 2025-04-17 16:35:50,006 | INFO     | -- intersect: -3325007900.373457
[2025-04-17 12:36:27] 2025-04-17 16:35:50,006 | INFO     | current memory leak: 1.91 B/s (using 1171 data points, chi2=6.63)
[2025-04-17 12:36:27] 2025-04-17 16:35:50,047 | INFO     | ..............................
[2025-04-17 12:36:27] 2025-04-17 16:35:50,048 | INFO     | . Timing measurements:
[2025-04-17 12:36:27] 2025-04-17 16:35:50,048 | INFO     | . get job = 0 s
[2025-04-17 12:36:27] 2025-04-17 16:35:50,048 | INFO     | . initial setup = 15 s
[2025-04-17 12:36:27] 2025-04-17 16:35:50,049 | INFO     | . payload setup = 59 s
[2025-04-17 12:36:27] 2025-04-17 16:35:50,049 | INFO     | . stage-in = 1 s
[2025-04-17 12:36:27] 2025-04-17 16:35:50,049 | INFO     | . payload execution = 72388 s
[2025-04-17 12:36:27] 2025-04-17 16:35:50,049 | INFO     | . stage-out = 20 s
[2025-04-17 12:36:27] 2025-04-17 16:35:50,049 | INFO     | . log creation = 5 s
[2025-04-17 12:36:27] 2025-04-17 16:35:50,050 | INFO     | ..............................
[2025-04-17 12:36:27] 2025-04-17 16:35:51,718 | INFO     | 
[2025-04-17 12:36:27] 2025-04-17 16:35:51,718 | INFO     | job summary report
[2025-04-17 12:36:27] 2025-04-17 16:35:51,718 | INFO     | --------------------------------------------------
[2025-04-17 12:36:27] 2025-04-17 16:35:51,718 | INFO     | PanDA job id: 6604150481
[2025-04-17 12:36:27] 2025-04-17 16:35:51,719 | INFO     | task id: 44075483
[2025-04-17 12:36:27] 2025-04-17 16:35:51,719 | INFO     | errors: (none)
[2025-04-17 12:36:27] 2025-04-17 16:35:51,719 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 12:36:27] 2025-04-17 16:35:51,719 | INFO     | pilot state: finished 
[2025-04-17 12:36:27] 2025-04-17 16:35:51,720 | INFO     | transexitcode: 0
[2025-04-17 12:36:27] 2025-04-17 16:35:51,720 | INFO     | exeerrorcode: 0
[2025-04-17 12:36:27] 2025-04-17 16:35:51,720 | INFO     | exeerrordiag: 
[2025-04-17 12:36:27] 2025-04-17 16:35:51,720 | INFO     | exitcode: 0
[2025-04-17 12:36:27] 2025-04-17 16:35:51,720 | INFO     | exitmsg: OK
[2025-04-17 12:36:27] 2025-04-17 16:35:51,720 | INFO     | cpuconsumptiontime: 120311 s
[2025-04-17 12:36:27] 2025-04-17 16:35:51,721 | INFO     | nevents: 400
[2025-04-17 12:36:27] 2025-04-17 16:35:51,721 | INFO     | neventsw: 0
[2025-04-17 12:36:27] 2025-04-17 16:35:51,721 | INFO     | pid: 1739422
[2025-04-17 12:36:27] 2025-04-17 16:35:51,721 | INFO     | pgrp: 1739422
[2025-04-17 12:36:27] 2025-04-17 16:35:51,744 | INFO     | corecount: 8
[2025-04-17 12:36:27] 2025-04-17 16:35:51,744 | INFO     | event service: False
[2025-04-17 12:36:27] 2025-04-17 16:35:51,744 | INFO     | sizes: {0: 2416537, 1: 2417138, 2: 2417222, 3: 2417278, 4: 2417449, 5: 2417477, 18: 2417661, 33: 2417689, 45: 2417979, 61: 2417979, 72454: 2469187, 72455: 2469466,
[2025-04-17 12:36:27] 2025-04-17 16:35:51,745 | INFO     | --------------------------------------------------
[2025-04-17 12:36:27] 2025-04-17 16:35:51,745 | INFO     | 
[2025-04-17 12:36:27] 2025-04-17 16:35:51,745 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-04-17 12:36:27] 2025-04-17 16:35:52,023 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,024 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,024 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,024 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,025 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,025 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,025 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,025 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,026 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,026 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,026 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,026 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,072 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,072 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,072 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,073 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 12:36:27] 2025-04-17 16:35:52,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,074 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 12:36:27] 2025-04-17 16:35:52,074 | INFO     | job 6604150481 has completed (purged errors)
[2025-04-17 12:36:27] 2025-04-17 16:35:52,074 | INFO     | overall cleanup function is called
[2025-04-17 12:36:27] 2025-04-17 16:35:53,174 | INFO     | --- collectZombieJob: --- 10, [1739422]
[2025-04-17 12:36:27] 2025-04-17 16:35:53,174 | INFO     | zombie collector waiting for pid 1739422
[2025-04-17 12:36:27] 2025-04-17 16:35:53,174 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 12:36:27] 2025-04-17 16:35:53,175 | INFO     | collected zombie processes
[2025-04-17 12:36:27] 2025-04-17 16:35:53,175 | INFO     | will attempt to kill all subprocesses of pid=1739422
[2025-04-17 12:36:27] 2025-04-17 16:36:06,343 | INFO     | process IDs to be killed: [1739422] (in reverse order)
[2025-04-17 12:36:27] 2025-04-17 16:36:06,639 | INFO     | PID=1715507 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-17 12:36:27] 2025-04-17 16:36:06,640 | INFO     | .. there are 25 such processes running
[2025-04-17 12:36:27] 2025-04-17 16:36:07,345 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 12:36:27] 2025-04-17 16:36:07,347 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 12:36:27] 2025-04-17 16:36:07,608 | INFO     | did not find any defunct processes belonging to 1739422
[2025-04-17 12:36:27] 2025-04-17 16:36:07,897 | INFO     | did not find any defunct processes belonging to 1739422
[2025-04-17 12:36:27] 2025-04-17 16:36:07,898 | INFO     | ready for new job
[2025-04-17 12:36:27] 2025-04-17 16:36:07,899 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 12:36:27] 2025-04-17 16:36:07,973 | INFO     | **************************************
[2025-04-17 12:36:27] 2025-04-17 16:36:07,974 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 12:36:27] 2025-04-17 16:36:07,974 | INFO     | **************************************
[2025-04-17 12:36:27] 2025-04-17 16:36:07,974 | INFO     | 
[2025-04-17 12:36:27] 2025-04-17 16:36:08,065 | INFO     | architecture information:
[2025-04-17 12:36:27] 2025-04-17 16:36:08,105 | INFO     | executing command: cat /etc/os-release
[2025-04-17 12:36:27] 2025-04-17 16:36:08,268 | INFO     | cat /etc/os-release:
[2025-04-17 12:36:27] NAME="CentOS Linux"
[2025-04-17 12:36:27] VERSION="7 (Core)"
[2025-04-17 12:36:27] ID="centos"
[2025-04-17 12:36:27] ID_LIKE="rhel fedora"
[2025-04-17 12:36:27] VERSION_ID="7"
[2025-04-17 12:36:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 12:36:27] ANSI_COLOR="0;31"
[2025-04-17 12:36:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 12:36:27] HOME_URL="https://www.centos.org/"
[2025-04-17 12:36:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 12:36:27] 
[2025-04-17 12:36:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 12:36:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 12:36:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 12:36:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 12:36:27] 
[2025-04-17 12:36:27] 2025-04-17 16:36:08,269 | INFO     | **************************************
[2025-04-17 12:36:27] 2025-04-17 16:36:08,773 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-04-17 12:36:27] 2025-04-17 16:36:08,943 | INFO     | sufficient remaining disk space (93594845184 B)
[2025-04-17 12:36:27] 2025-04-17 16:36:08,944 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 12:36:27] 2025-04-17 16:36:08,945 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 12:36:27] 2025-04-17 16:36:08,945 | INFO     | update_server=False
[2025-04-17 12:36:27] 2025-04-17 16:36:08,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 12:36:27] 2025-04-17 16:36:08,946 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 12:36:27] 2025-04-17 16:36:08,946 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 12:36:27] 2025-04-17 16:36:08,946 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 12:36:27] 2025-04-17 16:36:08,947 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 12:36:27] 2025-04-17 16:36:09,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 12:36:27] 2025-04-17 16:36:09,299 | INFO     | all data control threads have been joined
[2025-04-17 12:36:27] 2025-04-17 16:36:09,470 | INFO     | all job control threads have been joined
[2025-04-17 12:36:27] 2025-04-17 16:36:09,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 12:36:27] 2025-04-17 16:36:09,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 12:36:27] 2025-04-17 16:36:09,822 | INFO     | aborting loop
[2025-04-17 12:36:27] 2025-04-17 16:36:09,904 | INFO     | all payload control threads have been joined
[2025-04-17 12:36:27] 2025-04-17 16:36:09,952 | INFO     | [job] retrieve thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:09,988 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:09,995 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:10,126 | INFO     | [job] queue monitor thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:10,184 | INFO     | [payload] failed_post thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:10,185 | INFO     | [payload] validate_post thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:10,306 | INFO     | [data] control thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:10,312 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:10,476 | INFO     | [job] control thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:10,828 | INFO     | [job] job monitor thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:10,854 | INFO     | [data] copytool_in thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:10,910 | INFO     | [payload] control thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:10,917 | INFO     | [job] validate thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:11,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 12:36:27] 2025-04-17 16:36:11,370 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:11,816 | INFO     | [data] copytool_out thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:15,368 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 12:36:27] 2025-04-17 16:36:15,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040819701568)>', '<ExcThread(monitor, started 140039950427904)>']
[2025-04-17 12:36:27] 2025-04-17 16:36:16,016 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 12:36:27] 2025-04-17 16:36:16,016 | INFO     | [monitor] control thread has ended
[2025-04-17 12:36:27] 2025-04-17 16:36:20,974 | INFO     | all workflow threads have been joined
[2025-04-17 12:36:27] 2025-04-17 16:36:20,974 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 12:36:27] 2025-04-17 16:36:20,975 | INFO     | traces error code: 0
[2025-04-17 12:36:27] 2025-04-17 16:36:20,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 12:36:27] 2025-04-17 16:36:25,313 [wrapper] ==== pilot stdout END ====
[2025-04-17 12:36:27] 2025-04-17 16:36:25,359 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 12:36:27] 2025-04-17 16:36:25,385 [wrapper] pilotpid: 1715507
[2025-04-17 12:36:27] 2025-04-17 16:36:25,429 [wrapper] Pilot exit status: 0
[2025-04-17 12:36:27] 2025-04-17 16:36:25,540 [wrapper] pandaids: 6604150481
[2025-04-17 12:36:27] 2025-04-17 16:36:25,997 [wrapper] cleanup supervisor_pilot 1849614 1715508
[2025-04-17 12:36:27] 2025-04-17 16:36:26,030 [wrapper] Test setup, not cleaning
[2025-04-17 12:36:27] 2025-04-17 16:36:26,065 [wrapper] apfmon messages muted
[2025-04-17 12:36:27] 2025-04-17 16:36:26,131 [wrapper] ==== wrapper stdout END ====
[2025-04-17 12:36:27] 2025-04-17 16:36:26,185 [wrapper] ==== wrapper stderr END ====
[2025-04-17 12:36:27]  *** Error codes and diagnostics ***
[2025-04-17 12:36:27]     "exeErrorCode": 0,
[2025-04-17 12:36:27]     "exeErrorDiag": "",
[2025-04-17 12:36:27]     "pilotErrorCode": 0,
[2025-04-17 12:36:27]     "pilotErrorDiag": "",
[2025-04-17 12:36:27]  *** Listing of results directory ***
[2025-04-17 12:36:27] total 425820
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas      5111 Apr 16 14:02 queuedata.json
[2025-04-17 12:36:27] -rwx------. 1 boincer umatlas     37140 Apr 16 14:03 runpilot2-wrapper.sh
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas    495897 Apr 16 14:03 pilot3.tar.gz
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas       100 Apr 16 16:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 12:36:27] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 16 16:23 run_atlas
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas       105 Apr 16 16:23 job.xml
[2025-04-17 12:36:27] -rw-r--r--. 2 boincer umatlas 225358071 Apr 16 16:23 EVNT.44075481._001705.pool.root.1
[2025-04-17 12:36:27] -rw-r--r--. 2 boincer umatlas     17569 Apr 16 16:23 start_atlas.sh
[2025-04-17 12:36:27] drwxrwx--x. 2 boincer umatlas      4096 Apr 16 16:23 shared
[2025-04-17 12:36:27] -rw-r--r--. 2 boincer umatlas    508883 Apr 16 16:23 input.tar.gz
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas         0 Apr 16 16:23 boinc_lockfile
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas      2578 Apr 16 16:23 pandaJob.out
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas       467 Apr 16 16:23 setup.sh.local
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas    986560 Apr 16 16:25 agis_schedconf.cvmfs.json
[2025-04-17 12:36:27] drwx------. 4 boincer umatlas      4096 Apr 16 16:25 pilot3
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas 197239325 Apr 17 12:25 HITS.44075483._043535.pool.root.1
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas       532 Apr 17 12:26 boinc_task_state.xml
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas      6858 Apr 17 12:31 init_data.xml
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas      1053 Apr 17 12:34 memory_monitor_summary.json
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas   1618536 Apr 17 12:34 agis_ddmendpoints.agis.ALL.json
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas    785873 Apr 17 12:34 log.44075483._043535.job.log.tgz.1
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas      7760 Apr 17 12:35 heartbeat.json
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas        95 Apr 17 12:36 pilot_heartbeat.json
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas      4476 Apr 17 12:36 pilotlog.txt
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas   4005826 Apr 17 12:36 log.44075483._043535.job.log.1
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas      8192 Apr 17 12:36 boinc_mmap_file
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas       357 Apr 17 12:36 output.list
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas        29 Apr 17 12:36 wrapper_checkpoint.txt
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas       620 Apr 17 12:36 runtime_log
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas   4812800 Apr 17 12:36 result.tar.gz
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas       667 Apr 17 12:36 spFODmHIMP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmut2KDmW3Bq5m.diag
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas     11429 Apr 17 12:36 runtime_log.err
[2025-04-17 12:36:27] -rw-r--r--. 1 boincer umatlas     21586 Apr 17 12:36 stderr.txt
[2025-04-17 12:36:27] HITS file was successfully produced:
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas 197239325 Apr 17 12:25 shared/HITS.pool.root.1
[2025-04-17 12:36:27]  *** Contents of shared directory: ***
[2025-04-17 12:36:27] total 417924
[2025-04-17 12:36:27] -rw-r--r--. 2 boincer umatlas 225358071 Apr 16 16:23 ATLAS.root_0
[2025-04-17 12:36:27] -rw-r--r--. 2 boincer umatlas     17569 Apr 16 16:23 start_atlas.sh
[2025-04-17 12:36:27] -rw-r--r--. 2 boincer umatlas    508883 Apr 16 16:23 input.tar.gz
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas 197239325 Apr 17 12:25 HITS.pool.root.1
[2025-04-17 12:36:27] -rw-------. 1 boincer umatlas   4812800 Apr 17 12:36 result.tar.gz
12:36:29 (1709651): run_atlas exited; CPU time 125902.051017
12:36:29 (1709651): called boinc_finish(0)

</stderr_txt>
]]>

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