Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:48:34 (2960688): wrapper (7.7.26015): starting
11:48:34 (2960688): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 11:48:34] Arguments: --nthreads 12
[2025-04-17 11:48:34] Threads: 12
[2025-04-17 11:48:34] Checking for CVMFS
[2025-04-17 11:48:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 11:48:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 11:48:34] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 11:48:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 11:48:35] 2.12.7.0 20034 31529 102404 144958 0 56 19603364 46080000 922 130560 0 44732269 99.971 5575576 8401 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-17 11:48:35] CVMFS is ok
[2025-04-17 11:48:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 11:48:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 11:48:35] Further information can be found at the LHC@home message board.
[2025-04-17 11:48:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 11:48:35] Checking for apptainer binary...
[2025-04-17 11:48:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 11:48:35] Running /usr/bin/apptainer --version
[2025-04-17 11:48:35] apptainer version 1.4.0-1.el9
[2025-04-17 11:48:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 11:48:35] gpu01.farm.particle.cz
[2025-04-17 11:48:35] apptainer works
[2025-04-17 11:48:35] Set ATHENA_PROC_NUMBER=12
[2025-04-17 11:48:35] Set ATHENA_CORE_NUMBER=12
[2025-04-17 11:48:35] Starting ATLAS job with PandaID=6604149866
[2025-04-17 11:48:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 12:35:54]  *** The last 200 lines of the pilot log: ***
[2025-04-17 12:35:54]  is_altstaged=None
[2025-04-17 12:35:54]  is_tar=False
[2025-04-17 12:35:54]  lfn=log.44075483._043369.job.log.tgz.1
[2025-04-17 12:35:54]  mtime=0
[2025-04-17 12:35:54]  protocol_id=None
[2025-04-17 12:35:54]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-17 12:35:54]  replicas=None
[2025-04-17 12:35:54]  scope=mc23_13p6TeV
[2025-04-17 12:35:54]  status=None
[2025-04-17 12:35:54]  status_code=0
[2025-04-17 12:35:54]  storage_token=
[2025-04-17 12:35:54]  surl=/var/lib/boinc/slots/0/PanDA_Pilot-6604149866/log.44075483._043369.job.log.tgz.1
[2025-04-17 12:35:54]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/95/log.44075483._043369.job.log.tgz.1
[2025-04-17 12:35:54]  workdir=None
[2025-04-17 12:35:54] ]
[2025-04-17 12:35:54] 2025-04-17 10:35:34,026 | INFO     | transferring file log.44075483._043369.job.log.tgz.1 from /var/lib/boinc/slots/0/PanDA_Pilot-6604149866/log.44075483._043369.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-17 12:35:54] 2025-04-17 10:35:34,026 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6604149866/log.44075483._043369.job.log.tgz.1 /var/lib/boinc/slots/0/log.44075483._043369.job
[2025-04-17 12:35:54] 2025-04-17 10:35:34,040 | INFO     | adding to output.list: log.44075483._043369.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/95/log.44075483._043369.job.log.tg
[2025-04-17 12:35:54] 2025-04-17 10:35:34,040 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-17 12:35:54] 2025-04-17 10:35:34,040 | INFO     | summary of transferred files:
[2025-04-17 12:35:54] 2025-04-17 10:35:34,040 | INFO     |  -- lfn=log.44075483._043369.job.log.tgz.1, status_code=0, status=transferred
[2025-04-17 12:35:54] 2025-04-17 10:35:34,040 | INFO     | stage-out finished correctly
[2025-04-17 12:35:54] 2025-04-17 10:35:34,093 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-17 12:35:54] 2025-04-17 10:35:36,095 | INFO     | job 6604149866 has state=finished
[2025-04-17 12:35:54] 2025-04-17 10:35:36,095 | INFO     | preparing for final server update for job 6604149866 in state='finished'
[2025-04-17 12:35:54] 2025-04-17 10:35:36,672 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-04-17 12:35:54] 2025-04-17 10:35:36,673 | INFO     | this job has now completed (state=finished)
[2025-04-17 12:35:54] 2025-04-17 10:35:36,673 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-17 12:35:54] 2025-04-17 10:35:36,673 | INFO     | log transfer has been attempted: DONE
[2025-04-17 12:35:54] 2025-04-17 10:35:36,673 | INFO     | job 6604149866 has finished - writing final server update
[2025-04-17 12:35:54] 2025-04-17 10:35:36,673 | INFO     | total number of processed events: 400 (read)
[2025-04-17 12:35:54] 2025-04-17 10:35:36,676 | INFO     | executing command: lscpu
[2025-04-17 12:35:54] 2025-04-17 10:35:36,704 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-17 12:35:54] 2025-04-17 10:35:38,712 | WARNING  | process 2971189 can no longer be monitored (due to stat problems) - aborting
[2025-04-17 12:35:54] 2025-04-17 10:35:38,712 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6604149866/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 12:35:54] 2025-04-17 10:35:38,800 | INFO     | number of running child processes to parent process 2971189: 1
[2025-04-17 12:35:54] 2025-04-17 10:35:38,800 | INFO     | maximum number of monitored processes: 6
[2025-04-17 12:35:54] 2025-04-17 10:35:39,349 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-17 12:35:54] 2025-04-17 10:35:39,349 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6604149866/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 12:35:54] 2025-04-17 10:35:39,349 | INFO     | extracted standard info from prmon json
[2025-04-17 12:35:54] 2025-04-17 10:35:39,349 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 12:35:54] 2025-04-17 10:35:39,349 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 12:35:54] 2025-04-17 10:35:39,350 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 12:35:54] 2025-04-17 10:35:39,350 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 12:35:54] 2025-04-17 10:35:39,350 | INFO     | fitting pss+swap vs Time
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | sum of square deviations: 18381740.0
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | sum of deviations: 5570533725.000001
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | mean x: 1744884806.0
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | mean y: 2624409.076923077
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | -- intersect: -528779724708.20386
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | intersect: -528779724708.20386
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | chi2: 1.3332817502407637
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | -- intersect: -528779724708.20386
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | current memory leak: 303.05 B/s (using 39 data points, chi2=1.33)
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | ..............................
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | . Timing measurements:
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | . get job = 0 s
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | . initial setup = 1 s
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | . payload setup = 3 s
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | . stage-in = 0 s
[2025-04-17 12:35:54] 2025-04-17 10:35:39,351 | INFO     | . payload execution = 2790 s
[2025-04-17 12:35:54] 2025-04-17 10:35:39,352 | INFO     | . stage-out = 0 s
[2025-04-17 12:35:54] 2025-04-17 10:35:39,352 | INFO     | . log creation = 0 s
[2025-04-17 12:35:54] 2025-04-17 10:35:39,352 | INFO     | ..............................
[2025-04-17 12:35:54] 2025-04-17 10:35:39,481 | INFO     | 
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | job summary report
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | --------------------------------------------------
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | PanDA job id: 6604149866
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | task id: 44075483
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | errors: (none)
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | pilot state: finished 
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | transexitcode: 0
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | exeerrorcode: 0
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | exeerrordiag: 
[2025-04-17 12:35:54] 2025-04-17 10:35:39,482 | INFO     | exitcode: 0
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | exitmsg: OK
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | cpuconsumptiontime: 24195 s
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | nevents: 400
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | neventsw: 0
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | pid: 2971189
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | pgrp: 2971189
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | corecount: 12
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | event service: False
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | sizes: {0: 2426597, 1: 2426852, 3: 2427058, 11: 2427086, 2797: 2452456, 2798: 2461581, 2804: 2461695}
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | --------------------------------------------------
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | 
[2025-04-17 12:35:54] 2025-04-17 10:35:39,483 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-04-17 12:35:54] 2025-04-17 10:35:39,497 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,498 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 12:35:54] 2025-04-17 10:35:39,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,499 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 12:35:54] 2025-04-17 10:35:39,499 | INFO     | job 6604149866 has completed (purged errors)
[2025-04-17 12:35:54] 2025-04-17 10:35:39,499 | INFO     | overall cleanup function is called
[2025-04-17 12:35:54] 2025-04-17 10:35:40,507 | INFO     | --- collectZombieJob: --- 10, [2971189]
[2025-04-17 12:35:54] 2025-04-17 10:35:40,507 | INFO     | zombie collector waiting for pid 2971189
[2025-04-17 12:35:54] 2025-04-17 10:35:40,507 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 12:35:54] 2025-04-17 10:35:40,507 | INFO     | collected zombie processes
[2025-04-17 12:35:54] 2025-04-17 10:35:40,507 | INFO     | will attempt to kill all subprocesses of pid=2971189
[2025-04-17 12:35:54] 2025-04-17 10:35:40,598 | INFO     | process IDs to be killed: [2971189] (in reverse order)
[2025-04-17 12:35:54] 2025-04-17 10:35:40,636 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 12:35:54] 2025-04-17 10:35:40,636 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 12:35:54] 2025-04-17 10:35:40,640 | INFO     | did not find any defunct processes belonging to 2971189
[2025-04-17 12:35:54] 2025-04-17 10:35:40,643 | INFO     | did not find any defunct processes belonging to 2971189
[2025-04-17 12:35:54] 2025-04-17 10:35:40,643 | INFO     | ready for new job
[2025-04-17 12:35:54] 2025-04-17 10:35:40,643 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 12:35:54] 2025-04-17 10:35:40,644 | INFO     | **************************************
[2025-04-17 12:35:54] 2025-04-17 10:35:40,644 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 12:35:54] 2025-04-17 10:35:40,644 | INFO     | **************************************
[2025-04-17 12:35:54] 2025-04-17 10:35:40,644 | INFO     | 
[2025-04-17 12:35:54] 2025-04-17 10:35:40,645 | INFO     | architecture information:
[2025-04-17 12:35:54] 2025-04-17 10:35:40,645 | INFO     | executing command: cat /etc/os-release
[2025-04-17 12:35:54] 2025-04-17 10:35:40,656 | INFO     | cat /etc/os-release:
[2025-04-17 12:35:54] NAME="CentOS Linux"
[2025-04-17 12:35:54] VERSION="7 (Core)"
[2025-04-17 12:35:54] ID="centos"
[2025-04-17 12:35:54] ID_LIKE="rhel fedora"
[2025-04-17 12:35:54] VERSION_ID="7"
[2025-04-17 12:35:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 12:35:54] ANSI_COLOR="0;31"
[2025-04-17 12:35:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 12:35:54] HOME_URL="https://www.centos.org/"
[2025-04-17 12:35:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 12:35:54] 
[2025-04-17 12:35:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 12:35:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 12:35:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 12:35:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 12:35:54] 
[2025-04-17 12:35:54] 2025-04-17 10:35:40,656 | INFO     | **************************************
[2025-04-17 12:35:54] 2025-04-17 10:35:41,159 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-04-17 12:35:54] 2025-04-17 10:35:41,171 | INFO     | sufficient remaining disk space (72628568064 B)
[2025-04-17 12:35:54] 2025-04-17 10:35:41,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 12:35:54] 2025-04-17 10:35:41,171 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 12:35:54] 2025-04-17 10:35:41,171 | INFO     | update_server=False
[2025-04-17 12:35:54] 2025-04-17 10:35:41,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 12:35:54] 2025-04-17 10:35:41,171 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 12:35:54] 2025-04-17 10:35:41,177 | INFO     | PID=2964484 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-17 12:35:54] 2025-04-17 10:35:41,177 | INFO     | .. there are 2 such processes running
[2025-04-17 12:35:54] 2025-04-17 10:35:41,177 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 12:35:54] 2025-04-17 10:35:41,178 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 12:35:54] 2025-04-17 10:35:41,178 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 12:35:54] 2025-04-17 10:35:41,303 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-17 12:35:54] 2025-04-17 10:35:41,304 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-17 12:35:54] 2025-04-17 10:35:41,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 12:35:54] 2025-04-17 10:35:41,304 | INFO     | will abort loop
[2025-04-17 12:35:54] 2025-04-17 10:35:41,397 | INFO     | all job control threads have been joined
[2025-04-17 12:35:54] 2025-04-17 10:35:41,775 | INFO     | all payload control threads have been joined
[2025-04-17 12:35:54] 2025-04-17 10:35:42,104 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 12:35:54] 2025-04-17 10:35:42,176 | INFO     | [job] retrieve thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:42,177 | INFO     | [job] queue monitor thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:42,198 | INFO     | all data control threads have been joined
[2025-04-17 12:35:54] 2025-04-17 10:35:42,226 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:42,306 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:42,309 | INFO     | [job] job monitor thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:42,403 | INFO     | [job] control thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:42,438 | INFO     | [payload] failed_post thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:42,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:42,780 | INFO     | [payload] control thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:43,030 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:43,204 | INFO     | [data] control thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:43,563 | INFO     | [data] copytool_in thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:43,601 | INFO     | [job] validate thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:43,713 | INFO     | [payload] validate_post thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:44,110 | INFO     | [data] copytool_out thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:44,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 12:35:54] 2025-04-17 10:35:48,662 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 12:35:54] 2025-04-17 10:35:49,246 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140195968870208)>', '<ExcThread(monitor, started 140195609421568)>']
[2025-04-17 12:35:54] 2025-04-17 10:35:50,223 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 12:35:54] 2025-04-17 10:35:50,223 | INFO     | [monitor] control thread has ended
[2025-04-17 12:35:54] 2025-04-17 10:35:54,272 | INFO     | all workflow threads have been joined
[2025-04-17 12:35:54] 2025-04-17 10:35:54,272 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 12:35:54] 2025-04-17 10:35:54,272 | INFO     | traces error code: 0
[2025-04-17 12:35:54] 2025-04-17 10:35:54,273 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 12:35:54] 2025-04-17 10:35:54,339 [wrapper] ==== pilot stdout END ====
[2025-04-17 12:35:54] 2025-04-17 10:35:54,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 12:35:54] 2025-04-17 10:35:54,343 [wrapper] pilotpid: 2964484
[2025-04-17 12:35:54] 2025-04-17 10:35:54,345 [wrapper] Pilot exit status: 0
[2025-04-17 12:35:54] 2025-04-17 10:35:54,352 [wrapper] pandaids: 6604149866
[2025-04-17 12:35:54] 2025-04-17 10:35:54,377 [wrapper] cleanup supervisor_pilot 3029902 2964485
[2025-04-17 12:35:54] 2025-04-17 10:35:54,379 [wrapper] Test setup, not cleaning
[2025-04-17 12:35:54] 2025-04-17 10:35:54,381 [wrapper] apfmon messages muted
[2025-04-17 12:35:54] 2025-04-17 10:35:54,383 [wrapper] ==== wrapper stdout END ====
[2025-04-17 12:35:54] 2025-04-17 10:35:54,385 [wrapper] ==== wrapper stderr END ====
[2025-04-17 12:35:54]  *** Error codes and diagnostics ***
[2025-04-17 12:35:54]     "exeErrorCode": 0,
[2025-04-17 12:35:54]     "exeErrorDiag": "",
[2025-04-17 12:35:54]     "pilotErrorCode": 0,
[2025-04-17 12:35:54]     "pilotErrorDiag": "",
[2025-04-17 12:35:54]  *** Listing of results directory ***
[2025-04-17 12:35:54] total 413816
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc    495897 Apr 16 19:46 pilot3.tar.gz
[2025-04-17 12:35:54] -rwx------ 1 boinc boinc     37140 Apr 16 19:48 runpilot2-wrapper.sh
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc      5111 Apr 16 19:48 queuedata.json
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc       100 Apr 17 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 12:35:54] -rwxr-xr-x 1 boinc boinc      7986 Apr 17 11:48 run_atlas
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc       105 Apr 17 11:48 job.xml
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc      9434 Apr 17 11:48 init_data.xml
[2025-04-17 12:35:54] -rw-r--r-- 2 boinc boinc 223713616 Apr 17 11:48 EVNT.44075481._001699.pool.root.1
[2025-04-17 12:35:54] -rw-r--r-- 2 boinc boinc     17569 Apr 17 11:48 start_atlas.sh
[2025-04-17 12:35:54] drwxrwx--x 2 boinc boinc      4096 Apr 17 11:48 shared
[2025-04-17 12:35:54] -rw-r--r-- 2 boinc boinc    508890 Apr 17 11:48 input.tar.gz
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc         0 Apr 17 11:48 boinc_lockfile
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc      2579 Apr 17 11:48 pandaJob.out
[2025-04-17 12:35:54] -rw------- 1 boinc boinc       424 Apr 17 11:48 setup.sh.local
[2025-04-17 12:35:54] -rw------- 1 boinc boinc    990239 Apr 17 11:48 agis_schedconf.cvmfs.json
[2025-04-17 12:35:54] -rw------- 1 boinc boinc   1618536 Apr 17 11:48 agis_ddmendpoints.agis.ALL.json
[2025-04-17 12:35:54] drwx------ 4 boinc boinc      4096 Apr 17 11:48 pilot3
[2025-04-17 12:35:54] -rw------- 1 boinc boinc        95 Apr 17 12:35 pilot_heartbeat.json
[2025-04-17 12:35:54] -rw------- 1 boinc boinc 194888712 Apr 17 12:35 HITS.44075483._043369.pool.root.1
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc       529 Apr 17 12:35 boinc_task_state.xml
[2025-04-17 12:35:54] -rw------- 1 boinc boinc      1018 Apr 17 12:35 memory_monitor_summary.json
[2025-04-17 12:35:54] -rw------- 1 boinc boinc    334547 Apr 17 12:35 log.44075483._043369.job.log.tgz.1
[2025-04-17 12:35:54] -rw------- 1 boinc boinc      7688 Apr 17 12:35 heartbeat.json
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc      8192 Apr 17 12:35 boinc_mmap_file
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc        27 Apr 17 12:35 wrapper_checkpoint.txt
[2025-04-17 12:35:54] -rw------- 1 boinc boinc      4933 Apr 17 12:35 pilotlog.txt
[2025-04-17 12:35:54] -rw------- 1 boinc boinc    304496 Apr 17 12:35 log.44075483._043369.job.log.1
[2025-04-17 12:35:54] -rw------- 1 boinc boinc       357 Apr 17 12:35 output.list
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc       620 Apr 17 12:35 runtime_log
[2025-04-17 12:35:54] -rw------- 1 boinc boinc    655360 Apr 17 12:35 result.tar.gz
[2025-04-17 12:35:54] -rw------- 1 boinc boinc       658 Apr 17 12:35 sRPLDmG3LP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm8maLDmjs4Lan.diag
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc     11050 Apr 17 12:35 runtime_log.err
[2025-04-17 12:35:54] -rw-r--r-- 1 boinc boinc     21477 Apr 17 12:35 stderr.txt
[2025-04-17 12:35:54] HITS file was successfully produced:
[2025-04-17 12:35:54] -rw------- 1 boinc boinc 194888712 Apr 17 12:35 shared/HITS.pool.root.1
[2025-04-17 12:35:54]  *** Contents of shared directory: ***
[2025-04-17 12:35:54] total 409964
[2025-04-17 12:35:54] -rw-r--r-- 2 boinc boinc 223713616 Apr 17 11:48 ATLAS.root_0
[2025-04-17 12:35:54] -rw-r--r-- 2 boinc boinc     17569 Apr 17 11:48 start_atlas.sh
[2025-04-17 12:35:54] -rw-r--r-- 2 boinc boinc    508890 Apr 17 11:48 input.tar.gz
[2025-04-17 12:35:54] -rw------- 1 boinc boinc 194888712 Apr 17 12:35 HITS.pool.root.1
[2025-04-17 12:35:54] -rw------- 1 boinc boinc    655360 Apr 17 12:35 result.tar.gz
12:35:56 (2960688): run_atlas exited; CPU time 24213.348751
12:35:56 (2960688): called boinc_finish(0)

</stderr_txt>
]]>

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