Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:12:56 (2997375): wrapper (7.7.26015): starting
12:12:56 (2997375): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 12:12:56] Arguments: --nthreads 12
[2025-04-17 12:12:56] Threads: 12
[2025-04-17 12:12:56] Checking for CVMFS
[2025-04-17 12:12:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 12:12:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 12:12:56] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 12:12:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 12:12:56] 2.12.7.0 20034 31553 102308 144960 0 56 19607104 46080000 922 130560 0 44792436 99.971 5576832 8402 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-17 12:12:56] CVMFS is ok
[2025-04-17 12:12:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 12:12:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 12:12:56] Further information can be found at the LHC@home message board.
[2025-04-17 12:12:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 12:12:56] Checking for apptainer binary...
[2025-04-17 12:12:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 12:12:56] Running /usr/bin/apptainer --version
[2025-04-17 12:12:56] apptainer version 1.4.0-1.el9
[2025-04-17 12:12:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 12:12:56] gpu01.farm.particle.cz
[2025-04-17 12:12:56] apptainer works
[2025-04-17 12:12:56] Set ATHENA_PROC_NUMBER=12
[2025-04-17 12:12:56] Set ATHENA_CORE_NUMBER=12
[2025-04-17 12:12:56] Starting ATLAS job with PandaID=6604150336
[2025-04-17 12:12:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 12:59:01]  *** The last 200 lines of the pilot log: ***
[2025-04-17 12:59:01]  domain=
[2025-04-17 12:59:01]  filesize=360534
[2025-04-17 12:59:01]  filetype=log
[2025-04-17 12:59:01]  guid=47f62645-ad4f-4d2a-9f3c-f16a955331b1
[2025-04-17 12:59:01]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-17 12:59:01]  is_altstaged=None
[2025-04-17 12:59:01]  is_tar=False
[2025-04-17 12:59:01]  lfn=log.44075483._043390.job.log.tgz.1
[2025-04-17 12:59:01]  mtime=0
[2025-04-17 12:59:01]  protocol_id=None
[2025-04-17 12:59:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-17 12:59:01]  replicas=None
[2025-04-17 12:59:01]  scope=mc23_13p6TeV
[2025-04-17 12:59:01]  status=None
[2025-04-17 12:59:01]  status_code=0
[2025-04-17 12:59:01]  storage_token=
[2025-04-17 12:59:01]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6604150336/log.44075483._043390.job.log.tgz.1
[2025-04-17 12:59:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/1a/log.44075483._043390.job.log.tgz.1
[2025-04-17 12:59:01]  workdir=None
[2025-04-17 12:59:01] ]
[2025-04-17 12:59:01] 2025-04-17 10:58:43,665 | INFO     | transferring file log.44075483._043390.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6604150336/log.44075483._043390.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-17 12:59:01] 2025-04-17 10:58:43,665 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6604150336/log.44075483._043390.job.log.tgz.1 /var/lib/boinc/slots/1/log.44075483._043390.job
[2025-04-17 12:59:01] 2025-04-17 10:58:43,678 | INFO     | adding to output.list: log.44075483._043390.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/32/1a/log.44075483._043390.job.log.tg
[2025-04-17 12:59:01] 2025-04-17 10:58:43,679 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-17 12:59:01] 2025-04-17 10:58:43,679 | INFO     | summary of transferred files:
[2025-04-17 12:59:01] 2025-04-17 10:58:43,679 | INFO     |  -- lfn=log.44075483._043390.job.log.tgz.1, status_code=0, status=transferred
[2025-04-17 12:59:01] 2025-04-17 10:58:43,679 | INFO     | stage-out finished correctly
[2025-04-17 12:59:01] 2025-04-17 10:58:43,732 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-17 12:59:01] 2025-04-17 10:58:45,229 | INFO     | monitor loop #212: job 0:6604150336 is in state 'finished'
[2025-04-17 12:59:01] 2025-04-17 10:58:45,233 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 12:59:01] 2025-04-17 10:58:45,424 | INFO     | job 6604150336 has state=finished
[2025-04-17 12:59:01] 2025-04-17 10:58:45,424 | INFO     | preparing for final server update for job 6604150336 in state='finished'
[2025-04-17 12:59:01] 2025-04-17 10:58:45,425 | INFO     | this job has now completed (state=finished)
[2025-04-17 12:59:01] 2025-04-17 10:58:45,425 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-17 12:59:01] 2025-04-17 10:58:45,425 | INFO     | log transfer has been attempted: DONE
[2025-04-17 12:59:01] 2025-04-17 10:58:45,425 | INFO     | job 6604150336 has finished - writing final server update
[2025-04-17 12:59:01] 2025-04-17 10:58:45,425 | INFO     | total number of processed events: 400 (read)
[2025-04-17 12:59:01] 2025-04-17 10:58:45,428 | INFO     | executing command: lscpu
[2025-04-17 12:59:01] 2025-04-17 10:58:45,455 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-17 12:59:01] 2025-04-17 10:58:47,735 | INFO     | monitor loop #213: job 0:6604150336 is in state 'finished'
[2025-04-17 12:59:01] 2025-04-17 10:58:47,735 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 12:59:01] 2025-04-17 10:58:48,242 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-17 12:59:01] 2025-04-17 10:58:48,243 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6604150336/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 12:59:01] 2025-04-17 10:58:48,243 | INFO     | extracted standard info from prmon json
[2025-04-17 12:59:01] 2025-04-17 10:58:48,243 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 12:59:01] 2025-04-17 10:58:48,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 12:59:01] 2025-04-17 10:58:48,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 12:59:01] 2025-04-17 10:58:48,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 12:59:01] 2025-04-17 10:58:48,245 | INFO     | fitting pss+swap vs Time
[2025-04-17 12:59:01] 2025-04-17 10:58:48,245 | INFO     | sum of square deviations: 17003109.5
[2025-04-17 12:59:01] 2025-04-17 10:58:48,246 | INFO     | sum of deviations: 8116488224.0
[2025-04-17 12:59:01] 2025-04-17 10:58:48,246 | INFO     | mean x: 1744886237.5
[2025-04-17 12:59:01] 2025-04-17 10:58:48,246 | INFO     | mean y: 2496499.0
[2025-04-17 12:59:01] 2025-04-17 10:58:48,246 | INFO     | -- intersect: -832924480704.1061
[2025-04-17 12:59:01] 2025-04-17 10:58:48,246 | INFO     | intersect: -832924480704.1061
[2025-04-17 12:59:01] 2025-04-17 10:58:48,246 | INFO     | chi2: 1.234632144489036
[2025-04-17 12:59:01] 2025-04-17 10:58:48,246 | INFO     | -- intersect: -832924480704.1061
[2025-04-17 12:59:01] 2025-04-17 10:58:48,246 | INFO     | current memory leak: 477.35 B/s (using 38 data points, chi2=1.23)
[2025-04-17 12:59:01] 2025-04-17 10:58:48,246 | INFO     | ..............................
[2025-04-17 12:59:01] 2025-04-17 10:58:48,246 | INFO     | . Timing measurements:
[2025-04-17 12:59:01] 2025-04-17 10:58:48,247 | INFO     | . get job = 0 s
[2025-04-17 12:59:01] 2025-04-17 10:58:48,247 | INFO     | . initial setup = 1 s
[2025-04-17 12:59:01] 2025-04-17 10:58:48,247 | INFO     | . payload setup = 3 s
[2025-04-17 12:59:01] 2025-04-17 10:58:48,247 | INFO     | . stage-in = 0 s
[2025-04-17 12:59:01] 2025-04-17 10:58:48,247 | INFO     | . payload execution = 2719 s
[2025-04-17 12:59:01] 2025-04-17 10:58:48,247 | INFO     | . stage-out = 0 s
[2025-04-17 12:59:01] 2025-04-17 10:58:48,247 | INFO     | . log creation = 0 s
[2025-04-17 12:59:01] 2025-04-17 10:58:48,247 | INFO     | ..............................
[2025-04-17 12:59:01] 2025-04-17 10:58:48,764 | INFO     | 
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | job summary report
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | --------------------------------------------------
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | PanDA job id: 6604150336
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | task id: 44075483
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | errors: (none)
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | pilot state: finished 
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | transexitcode: 0
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | exeerrorcode: 0
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | exeerrordiag: 
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | exitcode: 0
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | exitmsg: OK
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | cpuconsumptiontime: 23155 s
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | nevents: 400
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | neventsw: 0
[2025-04-17 12:59:01] 2025-04-17 10:58:48,765 | INFO     | pid: 3007879
[2025-04-17 12:59:01] 2025-04-17 10:58:48,766 | INFO     | pgrp: 3007879
[2025-04-17 12:59:01] 2025-04-17 10:58:48,766 | INFO     | corecount: 12
[2025-04-17 12:59:01] 2025-04-17 10:58:48,766 | INFO     | event service: False
[2025-04-17 12:59:01] 2025-04-17 10:58:48,766 | INFO     | sizes: {0: 2426823, 3: 2427029, 11: 2427057, 2726: 2452372, 2727: 2461368, 2732: 2461482}
[2025-04-17 12:59:01] 2025-04-17 10:58:48,766 | INFO     | --------------------------------------------------
[2025-04-17 12:59:01] 2025-04-17 10:58:48,766 | INFO     | 
[2025-04-17 12:59:01] 2025-04-17 10:58:48,766 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-17 12:59:01] 2025-04-17 10:58:48,780 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,781 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,781 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,781 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,781 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,781 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,781 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,781 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,781 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,781 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,781 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | job 6604150336 has completed (purged errors)
[2025-04-17 12:59:01] 2025-04-17 10:58:48,782 | INFO     | overall cleanup function is called
[2025-04-17 12:59:01] 2025-04-17 10:58:49,791 | INFO     | --- collectZombieJob: --- 10, [3007879]
[2025-04-17 12:59:01] 2025-04-17 10:58:49,791 | INFO     | zombie collector waiting for pid 3007879
[2025-04-17 12:59:01] 2025-04-17 10:58:49,791 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 12:59:01] 2025-04-17 10:58:49,791 | INFO     | collected zombie processes
[2025-04-17 12:59:01] 2025-04-17 10:58:49,791 | INFO     | will attempt to kill all subprocesses of pid=3007879
[2025-04-17 12:59:01] 2025-04-17 10:58:49,882 | INFO     | process IDs to be killed: [3007879] (in reverse order)
[2025-04-17 12:59:01] 2025-04-17 10:58:49,920 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 12:59:01] 2025-04-17 10:58:49,920 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 12:59:01] 2025-04-17 10:58:49,924 | INFO     | did not find any defunct processes belonging to 3007879
[2025-04-17 12:59:01] 2025-04-17 10:58:49,927 | INFO     | did not find any defunct processes belonging to 3007879
[2025-04-17 12:59:01] 2025-04-17 10:58:49,927 | INFO     | ready for new job
[2025-04-17 12:59:01] 2025-04-17 10:58:49,927 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 12:59:01] 2025-04-17 10:58:49,927 | INFO     | **************************************
[2025-04-17 12:59:01] 2025-04-17 10:58:49,928 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 12:59:01] 2025-04-17 10:58:49,928 | INFO     | **************************************
[2025-04-17 12:59:01] 2025-04-17 10:58:49,928 | INFO     | 
[2025-04-17 12:59:01] 2025-04-17 10:58:49,929 | INFO     | architecture information:
[2025-04-17 12:59:01] 2025-04-17 10:58:49,929 | INFO     | executing command: cat /etc/os-release
[2025-04-17 12:59:01] 2025-04-17 10:58:49,940 | INFO     | cat /etc/os-release:
[2025-04-17 12:59:01] NAME="CentOS Linux"
[2025-04-17 12:59:01] VERSION="7 (Core)"
[2025-04-17 12:59:01] ID="centos"
[2025-04-17 12:59:01] ID_LIKE="rhel fedora"
[2025-04-17 12:59:01] VERSION_ID="7"
[2025-04-17 12:59:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 12:59:01] ANSI_COLOR="0;31"
[2025-04-17 12:59:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 12:59:01] HOME_URL="https://www.centos.org/"
[2025-04-17 12:59:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 12:59:01] 
[2025-04-17 12:59:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 12:59:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 12:59:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 12:59:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 12:59:01] 
[2025-04-17 12:59:01] 2025-04-17 10:58:49,940 | INFO     | **************************************
[2025-04-17 12:59:01] 2025-04-17 10:58:50,443 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-17 12:59:01] 2025-04-17 10:58:50,455 | INFO     | sufficient remaining disk space (72409415680 B)
[2025-04-17 12:59:01] 2025-04-17 10:58:50,455 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 12:59:01] 2025-04-17 10:58:50,456 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 12:59:01] 2025-04-17 10:58:50,456 | INFO     | update_server=False
[2025-04-17 12:59:01] 2025-04-17 10:58:50,456 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 12:59:01] 2025-04-17 10:58:50,456 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 12:59:01] 2025-04-17 10:58:50,674 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 12:59:01] 2025-04-17 10:58:50,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 12:59:01] 2025-04-17 10:58:50,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 12:59:01] 2025-04-17 10:58:50,890 | INFO     | all data control threads have been joined
[2025-04-17 12:59:01] 2025-04-17 10:58:51,143 | INFO     | all payload control threads have been joined
[2025-04-17 12:59:01] 2025-04-17 10:58:51,197 | INFO     | all job control threads have been joined
[2025-04-17 12:59:01] 2025-04-17 10:58:51,243 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 12:59:01] 2025-04-17 10:58:51,243 | INFO     | aborting loop
[2025-04-17 12:59:01] 2025-04-17 10:58:51,461 | INFO     | [job] retrieve thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:51,561 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:51,583 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:51,681 | INFO     | [payload] failed_post thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:51,742 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 12:59:01] 2025-04-17 10:58:51,895 | INFO     | [data] control thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:51,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:52,149 | INFO     | [payload] control thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:52,202 | INFO     | [job] control thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:52,249 | INFO     | [job] job monitor thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:52,257 | INFO     | [payload] validate_post thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:52,787 | INFO     | [job] validate thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:52,789 | INFO     | [data] copytool_in thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:52,896 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:53,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 12:59:01] 2025-04-17 10:58:53,748 | INFO     | [data] copytool_out thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:54,343 | INFO     | [job] queue monitor thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:54,462 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 12:59:01] 2025-04-17 10:58:56,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970842863424)>', '<ExcThread(monitor, started 139970232710912)>']
[2025-04-17 12:59:01] 2025-04-17 10:58:56,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 12:59:01] 2025-04-17 10:58:56,706 | INFO     | [monitor] control thread has ended
[2025-04-17 12:59:01] 2025-04-17 10:59:01,043 | INFO     | all workflow threads have been joined
[2025-04-17 12:59:01] 2025-04-17 10:59:01,043 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 12:59:01] 2025-04-17 10:59:01,043 | INFO     | traces error code: 0
[2025-04-17 12:59:01] 2025-04-17 10:59:01,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 12:59:01] 2025-04-17 10:59:01,106 [wrapper] ==== pilot stdout END ====
[2025-04-17 12:59:01] 2025-04-17 10:59:01,108 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 12:59:01] 2025-04-17 10:59:01,110 [wrapper] pilotpid: 3001177
[2025-04-17 12:59:01] 2025-04-17 10:59:01,112 [wrapper] Pilot exit status: 0
[2025-04-17 12:59:01] 2025-04-17 10:59:01,119 [wrapper] pandaids: 6604150336
[2025-04-17 12:59:01] 2025-04-17 10:59:01,145 [wrapper] cleanup supervisor_pilot 3065606 3001178
[2025-04-17 12:59:01] 2025-04-17 10:59:01,146 [wrapper] Test setup, not cleaning
[2025-04-17 12:59:01] 2025-04-17 10:59:01,148 [wrapper] apfmon messages muted
[2025-04-17 12:59:01] 2025-04-17 10:59:01,150 [wrapper] ==== wrapper stdout END ====
[2025-04-17 12:59:01] 2025-04-17 10:59:01,152 [wrapper] ==== wrapper stderr END ====
[2025-04-17 12:59:01]  *** Error codes and diagnostics ***
[2025-04-17 12:59:01]     "exeErrorCode": 0,
[2025-04-17 12:59:01]     "exeErrorDiag": "",
[2025-04-17 12:59:01]     "pilotErrorCode": 0,
[2025-04-17 12:59:01]     "pilotErrorDiag": "",
[2025-04-17 12:59:01]  *** Listing of results directory ***
[2025-04-17 12:59:01] total 411064
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc    495897 Apr 16 19:46 pilot3.tar.gz
[2025-04-17 12:59:01] -rwx------ 1 boinc boinc     37140 Apr 16 19:46 runpilot2-wrapper.sh
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc      5111 Apr 16 19:46 queuedata.json
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc       100 Apr 17 12:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 12:59:01] -rwxr-xr-x 1 boinc boinc      7986 Apr 17 12:12 run_atlas
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc       105 Apr 17 12:12 job.xml
[2025-04-17 12:59:01] -rw-r--r-- 2 boinc boinc 223713616 Apr 17 12:12 EVNT.44075481._001699.pool.root.1
[2025-04-17 12:59:01] -rw-r--r-- 2 boinc boinc    508894 Apr 17 12:12 input.tar.gz
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc      9434 Apr 17 12:12 init_data.xml
[2025-04-17 12:59:01] -rw-r--r-- 2 boinc boinc     17569 Apr 17 12:12 start_atlas.sh
[2025-04-17 12:59:01] drwxrwx--x 2 boinc boinc      4096 Apr 17 12:12 shared
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc         0 Apr 17 12:12 boinc_lockfile
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc      2578 Apr 17 12:12 pandaJob.out
[2025-04-17 12:59:01] -rw------- 1 boinc boinc       424 Apr 17 12:12 setup.sh.local
[2025-04-17 12:59:01] -rw------- 1 boinc boinc    990239 Apr 17 12:13 agis_schedconf.cvmfs.json
[2025-04-17 12:59:01] -rw------- 1 boinc boinc   1618536 Apr 17 12:13 agis_ddmendpoints.agis.ALL.json
[2025-04-17 12:59:01] drwx------ 4 boinc boinc      4096 Apr 17 12:13 pilot3
[2025-04-17 12:59:01] -rw------- 1 boinc boinc 192036485 Apr 17 12:58 HITS.44075483._043390.pool.root.1
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc       529 Apr 17 12:58 boinc_task_state.xml
[2025-04-17 12:59:01] -rw------- 1 boinc boinc        95 Apr 17 12:58 pilot_heartbeat.json
[2025-04-17 12:59:01] -rw------- 1 boinc boinc      1018 Apr 17 12:58 memory_monitor_summary.json
[2025-04-17 12:59:01] -rw------- 1 boinc boinc    360534 Apr 17 12:58 log.44075483._043390.job.log.tgz.1
[2025-04-17 12:59:01] -rw------- 1 boinc boinc      7690 Apr 17 12:58 heartbeat.json
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc      8192 Apr 17 12:58 boinc_mmap_file
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc        27 Apr 17 12:58 wrapper_checkpoint.txt
[2025-04-17 12:59:01] -rw------- 1 boinc boinc      4353 Apr 17 12:59 pilotlog.txt
[2025-04-17 12:59:01] -rw------- 1 boinc boinc    297096 Apr 17 12:59 log.44075483._043390.job.log.1
[2025-04-17 12:59:01] -rw------- 1 boinc boinc       357 Apr 17 12:59 output.list
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc       620 Apr 17 12:59 runtime_log
[2025-04-17 12:59:01] -rw------- 1 boinc boinc    675840 Apr 17 12:59 result.tar.gz
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc     11050 Apr 17 12:59 runtime_log.err
[2025-04-17 12:59:01] -rw------- 1 boinc boinc       657 Apr 17 12:59 B3WKDmN1LP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmRt2KDmA8bQUm.diag
[2025-04-17 12:59:01] -rw-r--r-- 1 boinc boinc     21018 Apr 17 12:59 stderr.txt
[2025-04-17 12:59:01] HITS file was successfully produced:
[2025-04-17 12:59:01] -rw------- 1 boinc boinc 192036485 Apr 17 12:58 shared/HITS.pool.root.1
[2025-04-17 12:59:01]  *** Contents of shared directory: ***
[2025-04-17 12:59:01] total 407192
[2025-04-17 12:59:01] -rw-r--r-- 2 boinc boinc 223713616 Apr 17 12:12 ATLAS.root_0
[2025-04-17 12:59:01] -rw-r--r-- 2 boinc boinc    508894 Apr 17 12:12 input.tar.gz
[2025-04-17 12:59:01] -rw-r--r-- 2 boinc boinc     17569 Apr 17 12:12 start_atlas.sh
[2025-04-17 12:59:01] -rw------- 1 boinc boinc 192036485 Apr 17 12:58 HITS.pool.root.1
[2025-04-17 12:59:01] -rw------- 1 boinc boinc    675840 Apr 17 12:59 result.tar.gz
12:59:02 (2997375): run_atlas exited; CPU time 23173.307788
12:59:02 (2997375): called boinc_finish(0)

</stderr_txt>
]]>

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