Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-17 03:36:51 (661797): Detected: vboxwrapper 26206
2025-04-17 03:36:51 (661797): Detected: BOINC client v7.20.2
2025-04-17 03:36:51 (661797): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-04-17 03:36:52 (661797): Successfully copied 'init_data.xml' to the shared directory.
2025-04-17 03:36:52 (661797): Create VM. (boinc_05121fac4c16ea89, slot#2)
2025-04-17 03:36:52 (661797): Setting Memory Size for VM. (4700MB)
2025-04-17 03:36:52 (661797): Setting CPU Count for VM. (7)
2025-04-17 03:36:52 (661797): Setting Chipset Options for VM.
2025-04-17 03:36:52 (661797): Setting Graphics Controller Options for VM.
2025-04-17 03:36:52 (661797): Setting Boot Options for VM.
2025-04-17 03:36:52 (661797): Setting Network Configuration for NAT.
2025-04-17 03:36:52 (661797): Enabling VM Network Access.
2025-04-17 03:36:52 (661797): Disabling USB Support for VM.
2025-04-17 03:36:52 (661797): Disabling COM Port Support for VM.
2025-04-17 03:36:52 (661797): Disabling LPT Port Support for VM.
2025-04-17 03:36:53 (661797): Disabling Audio Support for VM.
2025-04-17 03:36:53 (661797): Disabling Clipboard Support for VM.
2025-04-17 03:36:53 (661797): Disabling Drag and Drop Support for VM.
2025-04-17 03:36:53 (661797): Adding storage controller(s) to VM.
2025-04-17 03:36:53 (661797): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-17 03:36:54 (661797): Adding VirtualBox Guest Additions to VM.
2025-04-17 03:36:54 (661797): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-17 03:36:54 (661797): forwarding host port 58865 to guest port 80
2025-04-17 03:36:55 (661797): Enabling remote desktop for VM.
2025-04-17 03:36:55 (661797): Required extension pack not installed, remote desktop not enabled.
2025-04-17 03:36:55 (661797): Enabling shared directory for VM.
2025-04-17 03:36:55 (661797): Starting VM using VBoxManage interface. (boinc_05121fac4c16ea89, slot#2)
2025-04-17 03:36:56 (661797): Successfully started VM. (PID = '662414')
2025-04-17 03:36:56 (661797): Reporting VM Process ID to BOINC.
2025-04-17 03:36:56 (661797): Guest Log: BIOS: VirtualBox 7.1.4
2025-04-17 03:36:56 (661797): Guest Log: CPUID EDX: 0x178bfbff
2025-04-17 03:36:56 (661797): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-17 03:36:56 (661797): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-17 03:36:56 (661797): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-17 03:36:56 (661797): Detected: Web Application Enabled (http://localhost:58865)
2025-04-17 03:36:56 (661797): Preference change detected
2025-04-17 03:36:56 (661797): Setting CPU throttle for VM. (90%)
2025-04-17 03:36:56 (661797): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-17 03:36:58 (661797): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-17 03:36:58 (661797): Guest Log: BIOS: Booting from Hard Disk...
2025-04-17 03:37:01 (661797): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-17 03:37:01 (661797): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-17 03:37:01 (661797): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-17 03:37:10 (661797): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-17 03:37:10 (661797): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-17 03:37:29 (661797): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-17 03:37:29 (661797): Guest Log: 00:00:00.000535 main     Log opened 2025-04-17T01:37:27.701468000Z
2025-04-17 03:37:29 (661797): Guest Log: 00:00:00.003381 main     OS Product: Linux
2025-04-17 03:37:29 (661797): Guest Log: 00:00:00.003629 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-17 03:37:29 (661797): Guest Log: 00:00:00.003935 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-17 03:37:29 (661797): Guest Log: 00:00:00.004036 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-17 03:37:29 (661797): Guest Log: 00:00:00.004039 main     Process ID: 951
2025-04-17 03:37:29 (661797): Guest Log: 00:00:00.004041 main     Package type: LINUX_64BITS_GENERIC
2025-04-17 03:37:29 (661797): Guest Log: 00:00:00.006289 main     5.2.32 r132073 started. Verbose level = 0
2025-04-17 03:37:34 (661797): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-17 03:37:34 (661797): Guest Log: [INFO] Mounting shared directory
2025-04-17 03:37:34 (661797): Guest Log: [INFO] Checking for init_data.xml
2025-04-17 03:37:50 (661797): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-17 03:37:50 (661797): Guest Log: [INFO] Detected branch: prod
2025-04-17 03:37:51 (661797): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-17 03:37:51 (661797): Guest Log: Copying input files
2025-04-17 03:37:54 (661797): Guest Log: Copied input files into RunAtlas.
2025-04-17 03:37:54 (661797): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-17 03:37:54 (661797): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-17 03:37:54 (661797): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-17 03:37:54 (661797): Guest Log: Further information can be found at the LHC@home message board.
2025-04-17 03:38:05 (661797): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-17 03:38:05 (661797): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-17 03:38:05 (661797): Guest Log: 2.6.3.0 1661 0 32012 144944 3 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-04-17 03:38:10 (661797): Guest Log: copied the webapp to /var/www
2025-04-17 03:38:10 (661797): Guest Log: ATHENA_PROC_NUMBER=7
2025-04-17 03:38:10 (661797): Guest Log: ATHENA_CORE_NUMBER=7
2025-04-17 03:38:10 (661797): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-17 03:38:11 (661797): Guest Log:  *** Starting ATLAS job. (PandaID=6604150331 taskID=44075483) ***
2025-04-17 05:16:01 (661797): Status Report: Elapsed Time: '6000.000000'
2025-04-17 05:16:01 (661797): Status Report: CPU Time: '39556.230000'
2025-04-17 06:55:06 (661797): Status Report: Elapsed Time: '12000.000000'
2025-04-17 06:55:06 (661797): Status Report: CPU Time: '84738.990000'
2025-04-17 08:34:12 (661797): Status Report: Elapsed Time: '18000.000000'
2025-04-17 08:34:12 (661797): Status Report: CPU Time: '129943.170000'
2025-04-17 10:13:18 (661797): Status Report: Elapsed Time: '24000.000000'
2025-04-17 10:13:18 (661797): Status Report: CPU Time: '175151.270000'
2025-04-17 11:52:24 (661797): Status Report: Elapsed Time: '30000.000000'
2025-04-17 11:52:24 (661797): Status Report: CPU Time: '220316.630000'
2025-04-17 13:31:30 (661797): Status Report: Elapsed Time: '36000.000000'
2025-04-17 13:31:30 (661797): Status Report: CPU Time: '265503.280000'
2025-04-17 14:55:46 (661797): Guest Log:  *** Job finished ***
2025-04-17 14:55:46 (661797): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:35,090 | INFO     | [job] queue monitor thread has finished
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:36,117 | INFO     | [data] queue_monitor thread has finished
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:38,390 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125194307392)>', '<ExcThread(monitor, started 140124205590272)>']
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:38,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:38,505 | INFO     | [monitor] control thread has ended
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:42,460 [wrapper] supervise_pilot (15 min periods counter: 46)
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,408 | INFO     | all workflow threads have been joined
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,409 | INFO     | end of generic workflow (traces error code: 0)
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,409 | INFO     | traces error code: 0
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,410 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,592 [wrapper] ==== pilot stdout END ====
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,604 [wrapper] ==== wrapper stdout RESUME ====
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,616 [wrapper] pilotpid: 6025
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,628 [wrapper] Pilot exit status: 0
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,717 [wrapper] pandaids: 6604150331
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,906 [wrapper] cleanup supervisor_pilot 22880 6026
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,919 [wrapper] Test setup, not cleaning
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:43,963 [wrapper] apfmon messages muted
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:44,010 [wrapper] ==== wrapper stdout END ====
2025-04-17 14:55:46 (661797): Guest Log: 2025-04-17 12:55:44,024 [wrapper] ==== wrapper stderr END ====
2025-04-17 14:55:46 (661797): Guest Log:  *** Error codes and diagnostics ***
2025-04-17 14:55:46 (661797): Guest Log:     "exeErrorCode": 0,
2025-04-17 14:55:46 (661797): Guest Log:     "exeErrorDiag": "",
2025-04-17 14:55:46 (661797): Guest Log:     "pilotErrorCode": 0,
2025-04-17 14:55:46 (661797): Guest Log:     "pilotErrorDiag": "",
2025-04-17 14:55:46 (661797): Guest Log:  *** Listing of results directory ***
2025-04-17 14:55:46 (661797): Guest Log: total 214892
2025-04-17 14:55:46 (661797): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 16 17:34 pilot3.tar.gz
2025-04-17 14:55:46 (661797): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 16 17:45 queuedata.json
2025-04-17 14:55:46 (661797): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 16 17:46 runpilot2-wrapper.sh
2025-04-17 14:55:46 (661797): Guest Log: -rw-r--r--. 1 atlas atlas     17569 Apr 17 01:37 start_atlas.sh
2025-04-17 14:55:46 (661797): Guest Log: -rw-r--r--. 1 atlas atlas      6439 Apr 17 01:37 init_data.xml
2025-04-17 14:55:46 (661797): Guest Log: -rw-r--r--. 1 atlas atlas    508888 Apr 17 01:37 input.tar.gz
2025-04-17 14:55:46 (661797): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 17 01:37 EVNT.44075481._001699.pool.root.1 -> /data/./ATLAS.root_0
2025-04-17 14:55:46 (661797): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 17 01:38 pandaJob.out
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas       424 Apr 17 01:38 setup.sh.local
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas    986560 Apr 17 01:39 agis_schedconf.cvmfs.json
2025-04-17 14:55:46 (661797): Guest Log: drwx------. 4 atlas atlas      4096 Apr 17 01:39 pilot3
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas 208949231 Apr 17 12:53 HITS.44075483._043385.pool.root.1
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas      1037 Apr 17 12:54 memory_monitor_summary.json
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas        95 Apr 17 12:54 pilot_heartbeat.json
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 17 12:54 agis_ddmendpoints.agis.ALL.json
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas    607238 Apr 17 12:54 log.44075483._043385.job.log.tgz.1
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas      7680 Apr 17 12:55 heartbeat.json
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas      4413 Apr 17 12:55 pilotlog.txt
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas   3046566 Apr 17 12:55 log.44075483._043385.job.log.1
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas       357 Apr 17 12:55 output.list
2025-04-17 14:55:46 (661797): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 17 12:55 runtime_log
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas   3676160 Apr 17 12:55 result.tar.gz
2025-04-17 14:55:46 (661797): Guest Log: -rw-r--r--. 1 atlas atlas     10929 Apr 17 12:55 runtime_log.err
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas       661 Apr 17 12:55 6uIKDmG1LP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm1maLDmzZObrn.diag
2025-04-17 14:55:46 (661797): Guest Log: Looking for outputfile HITS.44075483._043385.pool.root.1
2025-04-17 14:55:46 (661797): Guest Log: HITS file was successfully produced
2025-04-17 14:55:46 (661797): Guest Log: -rw-------. 1 atlas atlas 208949231 Apr 17 12:53 /home/atlas/RunAtlas/HITS.44075483._043385.pool.root.1
2025-04-17 14:55:47 (661797): Guest Log: Successfully finished the ATLAS job!
2025-04-17 14:55:47 (661797): Guest Log: Copying the results back to the shared directory!
2025-04-17 14:55:47 (661797): Guest Log:  *** Contents of shared directory: ***
2025-04-17 14:55:48 (661797): Guest Log: total 222592
2025-04-17 14:55:48 (661797): Guest Log: -rw-r--r--. 1 root root 223713616 Apr 17 01:36 ATLAS.root_0
2025-04-17 14:55:48 (661797): Guest Log: -rw-r--r--. 1 root root      6439 Apr 17 01:36 init_data.xml
2025-04-17 14:55:48 (661797): Guest Log: -rw-r--r--. 1 root root    508888 Apr 17 01:36 input.tar.gz
2025-04-17 14:55:48 (661797): Guest Log: -rw-r--r--. 1 root root   3676160 Apr 17 12:55 result.tar.gz
2025-04-17 14:55:48 (661797): Guest Log: -rw-r--r--. 1 root root     17569 Apr 17 01:36 start_atlas.sh
2025-04-17 14:55:48 (661797): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-17 14:55:48 (661797): VM Completion File Detected.
2025-04-17 14:55:48 (661797): Powering off VM.
2025-04-17 14:55:48 (661797): Successfully stopped VM.
2025-04-17 14:55:48 (661797): Deregistering VM. (boinc_05121fac4c16ea89, slot#2)
2025-04-17 14:55:48 (661797): Removing network bandwidth throttle group from VM.
2025-04-17 14:55:48 (661797): Removing VM from VirtualBox.
14:55:54 (661797): called boinc_finish(0)

</stderr_txt>
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