Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
02:21:12 (130462): wrapper (7.7.26015): starting
02:21:12 (130462): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 02:21:12] Arguments: --nthreads 12
[2025-04-17 02:21:12] Threads: 12
[2025-04-17 02:21:12] Checking for CVMFS
[2025-04-17 02:21:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 02:21:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 02:21:14] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 02:21:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 02:21:16] 2.12.7.0 2746 401 50244 144946 2 55 2005202 4096001 912 130560 0 342273 98.118 822496 182 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-17 02:21:16] CVMFS is ok
[2025-04-17 02:21:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 02:21:17] Checking for apptainer binary...
[2025-04-17 02:21:17] apptainer is not installed, using version from CVMFS
[2025-04-17 02:21:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 02:21:20] martinpcalt
[2025-04-17 02:21:20] apptainer works
[2025-04-17 02:21:20] Set ATHENA_PROC_NUMBER=12
[2025-04-17 02:21:20] Set ATHENA_CORE_NUMBER=12
[2025-04-17 02:21:20] Starting ATLAS job with PandaID=6603687409
[2025-04-17 02:21:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 05:01:05]  *** The last 200 lines of the pilot log: ***
[2025-04-17 05:01:05] 2025-04-17 05:00:47,832 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 05:01:05] 2025-04-17 05:00:47,832 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 05:01:05] 2025-04-17 05:00:47,832 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 05:01:05] 2025-04-17 05:00:47,832 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 05:01:05] 2025-04-17 05:00:47,834 | INFO     | fitting pss+swap vs Time
[2025-04-17 05:01:05] 2025-04-17 05:00:47,834 | INFO     | sum of square deviations: 1154663510.0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,835 | INFO     | sum of deviations: 50755746803.000015
[2025-04-17 05:01:05] 2025-04-17 05:00:47,835 | INFO     | mean x: 1744861255.0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,835 | INFO     | mean y: 2592636.6
[2025-04-17 05:01:05] 2025-04-17 05:00:47,835 | INFO     | -- intersect: -76696580151.10233
[2025-04-17 05:01:05] 2025-04-17 05:00:47,835 | INFO     | intersect: -76696580151.10233
[2025-04-17 05:01:05] 2025-04-17 05:00:47,835 | INFO     | chi2: 5.078429951970337
[2025-04-17 05:01:05] 2025-04-17 05:00:47,836 | INFO     | sum of square deviations: 1046484737.5
[2025-04-17 05:01:05] 2025-04-17 05:00:47,836 | INFO     | sum of deviations: 59289836604.5
[2025-04-17 05:01:05] 2025-04-17 05:00:47,836 | INFO     | mean x: 1744861102.5
[2025-04-17 05:01:05] 2025-04-17 05:00:47,836 | INFO     | mean y: 2604281.8733333335
[2025-04-17 05:01:05] 2025-04-17 05:00:47,836 | INFO     | -- intersect: -98854575338.26683
[2025-04-17 05:01:05] 2025-04-17 05:00:47,836 | INFO     | intersect: -98854575338.26683
[2025-04-17 05:01:05] 2025-04-17 05:00:47,837 | INFO     | chi2: 4.4035553132424345
[2025-04-17 05:01:05] 2025-04-17 05:00:47,837 | INFO     | current chi2=4.4035553132424345 (change=13.28904100500714 %)
[2025-04-17 05:01:05] 2025-04-17 05:00:47,837 | INFO     | right removable region: 149
[2025-04-17 05:01:05] 2025-04-17 05:00:47,837 | INFO     | sum of square deviations: 1046484737.5
[2025-04-17 05:01:05] 2025-04-17 05:00:47,837 | INFO     | sum of deviations: 10634798804.000004
[2025-04-17 05:01:05] 2025-04-17 05:00:47,837 | INFO     | mean x: 1744861407.5
[2025-04-17 05:01:05] 2025-04-17 05:00:47,837 | INFO     | mean y: 2648998.546666667
[2025-04-17 05:01:05] 2025-04-17 05:00:47,837 | INFO     | -- intersect: -17729334416.669426
[2025-04-17 05:01:05] 2025-04-17 05:00:47,838 | INFO     | intersect: -17729334416.669426
[2025-04-17 05:01:05] 2025-04-17 05:00:47,838 | INFO     | chi2: 2.5051476250529037
[2025-04-17 05:01:05] 2025-04-17 05:00:47,838 | INFO     | current chi2=2.5051476250529037 (change=50.670824472414886 %)
[2025-04-17 05:01:05] 2025-04-17 05:00:47,838 | INFO     | sum of square deviations: 945282840.0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,838 | INFO     | sum of deviations: -22315419916.0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,839 | INFO     | mean x: 1744861560.0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,839 | INFO     | mean y: 2698662.351724138
[2025-04-17 05:01:05] 2025-04-17 05:00:47,839 | INFO     | -- intersect: 41193881617.378
[2025-04-17 05:01:05] 2025-04-17 05:00:47,839 | INFO     | intersect: 41193881617.378
[2025-04-17 05:01:05] 2025-04-17 05:00:47,847 | INFO     | chi2: 0.8957013374531034
[2025-04-17 05:01:05] 2025-04-17 05:00:47,847 | INFO     | current chi2=0.8957013374531034 (change=64.24556666858354 %)
[2025-04-17 05:01:05] 2025-04-17 05:00:47,847 | INFO     | sum of square deviations: 850825255.0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,848 | INFO     | sum of deviations: -26080222857.0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,848 | INFO     | mean x: 1744861712.5
[2025-04-17 05:01:05] 2025-04-17 05:00:47,848 | INFO     | mean y: 2704517.9
[2025-04-17 05:01:05] 2025-04-17 05:00:47,848 | INFO     | -- intersect: 53487696940.51757
[2025-04-17 05:01:05] 2025-04-17 05:00:47,848 | INFO     | intersect: 53487696940.51757
[2025-04-17 05:01:05] 2025-04-17 05:00:47,848 | INFO     | chi2: 0.7724101594280961
[2025-04-17 05:01:05] 2025-04-17 05:00:47,848 | INFO     | current chi2=0.7724101594280961 (change=13.764764310342736 %)
[2025-04-17 05:01:05] 2025-04-17 05:00:47,848 | INFO     | left removable region: 30
[2025-04-17 05:01:05] 2025-04-17 05:00:47,849 | INFO     | sum of square deviations: 522502820.0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,849 | INFO     | sum of deviations: -7816409215.999999
[2025-04-17 05:01:05] 2025-04-17 05:00:47,849 | INFO     | mean x: 1744861987.0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,849 | INFO     | mean y: 2705272.067226891
[2025-04-17 05:01:05] 2025-04-17 05:00:47,849 | INFO     | -- intersect: 26105062606.39677
[2025-04-17 05:01:05] 2025-04-17 05:00:47,849 | INFO     | intersect: 26105062606.39677
[2025-04-17 05:01:05] 2025-04-17 05:00:47,849 | INFO     | chi2: 0.03446326919748403
[2025-04-17 05:01:05] 2025-04-17 05:00:47,849 | INFO     | -- intersect: 26105062606.39677
[2025-04-17 05:01:05] 2025-04-17 05:00:47,849 | INFO     | current memory leak: -14.96 B/s (using 119 data points, chi2=0.03)
[2025-04-17 05:01:05] 2025-04-17 05:00:47,850 | INFO     | ..............................
[2025-04-17 05:01:05] 2025-04-17 05:00:47,850 | INFO     | . Timing measurements:
[2025-04-17 05:01:05] 2025-04-17 05:00:47,850 | INFO     | . get job = 0 s
[2025-04-17 05:01:05] 2025-04-17 05:00:47,850 | INFO     | . initial setup = 2 s
[2025-04-17 05:01:05] 2025-04-17 05:00:47,850 | INFO     | . payload setup = 4 s
[2025-04-17 05:01:05] 2025-04-17 05:00:47,850 | INFO     | . stage-in = 0 s
[2025-04-17 05:01:05] 2025-04-17 05:00:47,850 | INFO     | . payload execution = 9435 s
[2025-04-17 05:01:05] 2025-04-17 05:00:47,850 | INFO     | . stage-out = 14 s
[2025-04-17 05:01:05] 2025-04-17 05:00:47,850 | INFO     | . log creation = 0 s
[2025-04-17 05:01:05] 2025-04-17 05:00:47,850 | INFO     | ..............................
[2025-04-17 05:01:05] 2025-04-17 05:00:47,997 | INFO     | 
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | job summary report
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | --------------------------------------------------
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | PanDA job id: 6603687409
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | task id: 44075483
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | errors: (none)
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | pilot state: finished 
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | transexitcode: 0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | exeerrorcode: 0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | exeerrordiag: 
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | exitcode: 0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | exitmsg: OK
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | cpuconsumptiontime: 30652 s
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | nevents: 400
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | neventsw: 0
[2025-04-17 05:01:05] 2025-04-17 05:00:47,998 | INFO     | pid: 140489
[2025-04-17 05:01:05] 2025-04-17 05:00:47,999 | INFO     | pgrp: 140489
[2025-04-17 05:01:05] 2025-04-17 05:00:47,999 | INFO     | corecount: 12
[2025-04-17 05:01:05] 2025-04-17 05:00:47,999 | INFO     | event service: False
[2025-04-17 05:01:05] 2025-04-17 05:00:47,999 | INFO     | sizes: {0: 2417383, 2: 2417589, 11: 2417617, 9446: 2445812, 9461: 2454799, 9462: 2454855, 9500: 2455153}
[2025-04-17 05:01:05] 2025-04-17 05:00:47,999 | INFO     | --------------------------------------------------
[2025-04-17 05:01:05] 2025-04-17 05:00:47,999 | INFO     | 
[2025-04-17 05:01:05] 2025-04-17 05:00:47,999 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-04-17 05:01:05] 2025-04-17 05:00:48,035 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,035 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,035 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,036 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 05:01:05] 2025-04-17 05:00:48,037 | INFO     | job 6603687409 has completed (purged errors)
[2025-04-17 05:01:05] 2025-04-17 05:00:48,037 | INFO     | overall cleanup function is called
[2025-04-17 05:01:05] 2025-04-17 05:00:49,067 | INFO     | --- collectZombieJob: --- 10, [140489]
[2025-04-17 05:01:05] 2025-04-17 05:00:49,067 | INFO     | zombie collector waiting for pid 140489
[2025-04-17 05:01:05] 2025-04-17 05:00:49,067 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 05:01:05] 2025-04-17 05:00:49,067 | INFO     | collected zombie processes
[2025-04-17 05:01:05] 2025-04-17 05:00:49,067 | INFO     | will attempt to kill all subprocesses of pid=140489
[2025-04-17 05:01:05] 2025-04-17 05:00:49,216 | INFO     | process IDs to be killed: [140489] (in reverse order)
[2025-04-17 05:01:05] 2025-04-17 05:00:49,272 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 05:01:05] 2025-04-17 05:00:49,272 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 05:01:05] 2025-04-17 05:00:49,273 | INFO     | did not find any defunct processes belonging to 140489
[2025-04-17 05:01:05] 2025-04-17 05:00:49,275 | INFO     | did not find any defunct processes belonging to 140489
[2025-04-17 05:01:05] 2025-04-17 05:00:49,275 | INFO     | ready for new job
[2025-04-17 05:01:05] 2025-04-17 05:00:49,275 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 05:01:05] 2025-04-17 05:00:49,288 | INFO     | **************************************
[2025-04-17 05:01:05] 2025-04-17 05:00:49,288 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 05:01:05] 2025-04-17 05:00:49,288 | INFO     | **************************************
[2025-04-17 05:01:05] 2025-04-17 05:00:49,288 | INFO     | 
[2025-04-17 05:01:05] 2025-04-17 05:00:49,311 | INFO     | architecture information:
[2025-04-17 05:01:05] 2025-04-17 05:00:49,315 | INFO     | executing command: cat /etc/os-release
[2025-04-17 05:01:05] 2025-04-17 05:00:49,359 | INFO     | cat /etc/os-release:
[2025-04-17 05:01:05] NAME="CentOS Linux"
[2025-04-17 05:01:05] VERSION="7 (Core)"
[2025-04-17 05:01:05] ID="centos"
[2025-04-17 05:01:05] ID_LIKE="rhel fedora"
[2025-04-17 05:01:05] VERSION_ID="7"
[2025-04-17 05:01:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 05:01:05] ANSI_COLOR="0;31"
[2025-04-17 05:01:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 05:01:05] HOME_URL="https://www.centos.org/"
[2025-04-17 05:01:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 05:01:05] 
[2025-04-17 05:01:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 05:01:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 05:01:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 05:01:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 05:01:05] 
[2025-04-17 05:01:05] 2025-04-17 05:00:49,359 | INFO     | **************************************
[2025-04-17 05:01:05] 2025-04-17 05:00:49,860 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/3
[2025-04-17 05:01:05] 2025-04-17 05:00:49,895 | INFO     | sufficient remaining disk space (275644416000 B)
[2025-04-17 05:01:05] 2025-04-17 05:00:49,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 05:01:05] 2025-04-17 05:00:49,896 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 05:01:05] 2025-04-17 05:00:49,896 | INFO     | update_server=False
[2025-04-17 05:01:05] 2025-04-17 05:00:49,896 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 05:01:05] 2025-04-17 05:00:49,899 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 05:01:05] 2025-04-17 05:00:49,903 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 05:01:05] 2025-04-17 05:00:49,903 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 05:01:05] 2025-04-17 05:00:49,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 05:01:05] 2025-04-17 05:00:49,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 05:01:05] 2025-04-17 05:00:49,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 05:01:05] 2025-04-17 05:00:49,915 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-17 05:01:05] 2025-04-17 05:00:49,915 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-17 05:01:05] 2025-04-17 05:00:49,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 05:01:05] 2025-04-17 05:00:49,915 | INFO     | will abort loop
[2025-04-17 05:01:05] 2025-04-17 05:00:49,951 | INFO     | all data control threads have been joined
[2025-04-17 05:01:05] 2025-04-17 05:00:50,055 | INFO     | all job control threads have been joined
[2025-04-17 05:01:05] 2025-04-17 05:00:50,890 | INFO     | all payload control threads have been joined
[2025-04-17 05:01:05] 2025-04-17 05:00:50,903 | INFO     | [job] retrieve thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:50,903 | INFO     | [job] queue monitor thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:50,923 | INFO     | [job] job monitor thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:50,959 | INFO     | [data] control thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,060 | INFO     | [job] control thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,447 | INFO     | [job] validate thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,500 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,579 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,607 | INFO     | [data] copytool_in thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,839 | INFO     | [payload] failed_post thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,839 | INFO     | [payload] validate_post thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,895 | INFO     | [payload] control thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,919 | INFO     | [data] copytool_out thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,931 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:51,935 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:52,115 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 05:01:05] 2025-04-17 05:00:56,131 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 05:01:05] 2025-04-17 05:00:56,495 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139743279413056)>', '<ExcThread(monitor, started 139742985312000)>']
[2025-04-17 05:01:05] 2025-04-17 05:00:56,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 05:01:05] 2025-04-17 05:00:56,939 | INFO     | [monitor] control thread has ended
[2025-04-17 05:01:05] 2025-04-17 05:01:01,519 | INFO     | all workflow threads have been joined
[2025-04-17 05:01:05] 2025-04-17 05:01:01,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 05:01:05] 2025-04-17 05:01:01,555 | INFO     | traces error code: 0
[2025-04-17 05:01:05] 2025-04-17 05:01:01,571 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 05:01:05] 2025-04-17 05:01:02,976 [wrapper] ==== pilot stdout END ====
[2025-04-17 05:01:05] 2025-04-17 05:01:03,000 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 05:01:05] 2025-04-17 05:01:03,027 [wrapper] pilotpid: 134082
[2025-04-17 05:01:05] 2025-04-17 05:01:03,044 [wrapper] Pilot exit status: 0
[2025-04-17 05:01:05] 2025-04-17 05:01:03,248 [wrapper] pandaids: 6603687409
[2025-04-17 05:01:05] 2025-04-17 05:01:03,343 [wrapper] cleanup supervisor_pilot  183759 134083
[2025-04-17 05:01:05] 2025-04-17 05:01:03,383 [wrapper] Test setup, not cleaning
[2025-04-17 05:01:05] 2025-04-17 05:01:03,416 [wrapper] apfmon messages muted
[2025-04-17 05:01:05] 2025-04-17 05:01:03,436 [wrapper] ==== wrapper stdout END ====
[2025-04-17 05:01:05] 2025-04-17 05:01:03,456 [wrapper] ==== wrapper stderr END ====
[2025-04-17 05:01:05]  *** Error codes and diagnostics ***
[2025-04-17 05:01:05]     "exeErrorCode": 0,
[2025-04-17 05:01:05]     "exeErrorDiag": "",
[2025-04-17 05:01:05]     "pilotErrorCode": 0,
[2025-04-17 05:01:05]     "pilotErrorDiag": "",
[2025-04-17 05:01:05]  *** Listing of results directory ***
[2025-04-17 05:01:05] total 409296
[2025-04-17 05:01:05] -rw-r--r-- 1 boinc boinc    495897 Apr 15 14:24 pilot3.tar.gz
[2025-04-17 05:01:05] -rwx------ 1 boinc boinc     37140 Apr 15 14:33 runpilot2-wrapper.sh
[2025-04-17 05:01:05] -rw-r--r-- 1 boinc boinc      5111 Apr 15 14:33 queuedata.json
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc       100 Apr 17 02:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 05:01:05] -rwxr-xr-x 1 boinc boinc      7986 Apr 17 02:21 run_atlas
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc       105 Apr 17 02:21 job.xml
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc      9322 Apr 17 02:21 init_data.xml
[2025-04-17 05:01:05] -rw-r--r-- 2 boinc boinc 223543779 Apr 17 02:21 EVNT.44075481._001128.pool.root.1
[2025-04-17 05:01:05] drwxrwx--x 2 boinc boinc      4096 Apr 17 02:21 shared
[2025-04-17 05:01:05] -rw-r--r-- 2 boinc boinc    508887 Apr 17 02:21 input.tar.gz
[2025-04-17 05:01:05] -rw-r--r-- 2 boinc boinc     17569 Apr 17 02:21 start_atlas.sh
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc         0 Apr 17 02:21 boinc_lockfile
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc      2576 Apr 17 02:21 pandaJob.out
[2025-04-17 05:01:05] -rw------- 1 boinc boinc       424 Apr 17 02:21 setup.sh.local
[2025-04-17 05:01:05] -rw------- 1 boinc boinc    986528 Apr 17 02:22 agis_schedconf.cvmfs.json
[2025-04-17 05:01:05] -rw------- 1 boinc boinc   1603529 Apr 17 02:22 agis_ddmendpoints.agis.ALL.json
[2025-04-17 05:01:05] drwx------ 4 boinc boinc      4096 Apr 17 02:22 pilot3
[2025-04-17 05:01:05] -rw------- 1 boinc boinc 189080709 Apr 17 04:58 HITS.44075483._028837.pool.root.1
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc       529 Apr 17 04:58 boinc_task_state.xml
[2025-04-17 05:01:05] -rw------- 1 boinc boinc      1040 Apr 17 04:59 memory_monitor_summary.json
[2025-04-17 05:01:05] -rw------- 1 boinc boinc    393801 Apr 17 05:00 log.44075483._028837.job.log.tgz.1
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc      8192 Apr 17 05:00 boinc_mmap_file
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc        27 Apr 17 05:00 wrapper_checkpoint.txt
[2025-04-17 05:01:05] -rw------- 1 boinc boinc        95 Apr 17 05:00 pilot_heartbeat.json
[2025-04-17 05:01:05] -rw------- 1 boinc boinc      7708 Apr 17 05:00 heartbeat.json
[2025-04-17 05:01:05] -rw------- 1 boinc boinc      4686 Apr 17 05:01 pilotlog.txt
[2025-04-17 05:01:05] -rw------- 1 boinc boinc    928708 Apr 17 05:01 log.44075483._028837.job.log.1
[2025-04-17 05:01:05] -rw------- 1 boinc boinc       357 Apr 17 05:01 output.list
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc       620 Apr 17 05:01 runtime_log
[2025-04-17 05:01:05] -rw------- 1 boinc boinc   1341440 Apr 17 05:01 result.tar.gz
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc     11432 Apr 17 05:01 runtime_log.err
[2025-04-17 05:01:05] -rw------- 1 boinc boinc       659 Apr 17 05:01 lZ9MDmDXwO7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmrKYLDmBXsnFm.diag
[2025-04-17 05:01:05] -rw-rw-r-- 1 boinc boinc     20551 Apr 17 05:01 stderr.txt
[2025-04-17 05:01:05] HITS file was successfully produced:
[2025-04-17 05:01:05] -rw------- 1 boinc boinc 189080709 Apr 17 04:58 shared/HITS.pool.root.1
[2025-04-17 05:01:05]  *** Contents of shared directory: ***
[2025-04-17 05:01:05] total 404796
[2025-04-17 05:01:05] -rw-r--r-- 2 boinc boinc 223543779 Apr 17 02:21 ATLAS.root_0
[2025-04-17 05:01:05] -rw-r--r-- 2 boinc boinc    508887 Apr 17 02:21 input.tar.gz
[2025-04-17 05:01:05] -rw-r--r-- 2 boinc boinc     17569 Apr 17 02:21 start_atlas.sh
[2025-04-17 05:01:05] -rw------- 1 boinc boinc 189080709 Apr 17 04:58 HITS.pool.root.1
[2025-04-17 05:01:05] -rw------- 1 boinc boinc   1341440 Apr 17 05:01 result.tar.gz
05:01:07 (130462): run_atlas exited; CPU time 30697.631920
05:01:07 (130462): called boinc_finish(0)

</stderr_txt>
]]>

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