Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:29:02 (212922): wrapper (7.7.26015): starting
21:29:02 (212922): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 21:29:02] Arguments: --nthreads 12
[2025-04-16 21:29:02] Threads: 12
[2025-04-16 21:29:02] Checking for CVMFS
[2025-04-16 21:29:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 21:29:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 21:29:03] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 21:29:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 21:29:03] 2.11.5.0 3463 19407 231024 144949 1 116 41336927 45568001 10127 130560 0 140199121 99.675 173695394 29365 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-04-16 21:29:03] CVMFS is ok
[2025-04-16 21:29:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 21:29:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 21:29:03] Further information can be found at the LHC@home message board.
[2025-04-16 21:29:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 21:29:03] Checking for apptainer binary...
[2025-04-16 21:29:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 21:29:03] Running /usr/bin/apptainer --version
[2025-04-16 21:29:03] apptainer version 1.3.5-1.el9
[2025-04-16 21:29:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 21:29:03] WARNING: Environment variable TMPDIR already has value [/home/boinc/slots/0/.apptainertmp], will not forward new value [/home/boinc] from parent process environment wns0125.triumf.lcg
[2025-04-16 21:29:03] apptainer works
[2025-04-16 21:29:03] Set ATHENA_PROC_NUMBER=12
[2025-04-16 21:29:03] Set ATHENA_CORE_NUMBER=12
[2025-04-16 21:29:03] Starting ATLAS job with PandaID=6604148517
[2025-04-16 21:29:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 22:35:06]  *** The last 200 lines of the pilot log: ***
[2025-04-16 22:35:06]  is_tar=False
[2025-04-16 22:35:06]  lfn=log.44075483._042966.job.log.tgz.1
[2025-04-16 22:35:06]  mtime=0
[2025-04-16 22:35:06]  protocol_id=None
[2025-04-16 22:35:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 22:35:06]  replicas=None
[2025-04-16 22:35:06]  scope=mc23_13p6TeV
[2025-04-16 22:35:06]  status=None
[2025-04-16 22:35:06]  status_code=0
[2025-04-16 22:35:06]  storage_token=
[2025-04-16 22:35:06]  surl=/home/boinc/slots/0/PanDA_Pilot-6604148517/log.44075483._042966.job.log.tgz.1
[2025-04-16 22:35:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/1f/log.44075483._042966.job.log.tgz.1
[2025-04-16 22:35:06]  workdir=None
[2025-04-16 22:35:06] ]
[2025-04-16 22:35:06] 2025-04-17 05:34:38,874 | INFO     | transferring file log.44075483._042966.job.log.tgz.1 from /home/boinc/slots/0/PanDA_Pilot-6604148517/log.44075483._042966.job.log.tgz.1 to /home/boinc/slots/0/log.
[2025-04-16 22:35:06] 2025-04-17 05:34:38,875 | INFO     | executing command: /usr/bin/env mv /home/boinc/slots/0/PanDA_Pilot-6604148517/log.44075483._042966.job.log.tgz.1 /home/boinc/slots/0/log.44075483._042966.job.log.t
[2025-04-16 22:35:06] 2025-04-17 05:34:38,899 | INFO     | adding to output.list: log.44075483._042966.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/23/1f/log.44075483._042966.job.log.tg
[2025-04-16 22:35:06] 2025-04-17 05:34:38,900 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 22:35:06] 2025-04-17 05:34:38,901 | INFO     | summary of transferred files:
[2025-04-16 22:35:06] 2025-04-17 05:34:38,901 | INFO     |  -- lfn=log.44075483._042966.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 22:35:06] 2025-04-17 05:34:38,901 | INFO     | stage-out finished correctly
[2025-04-16 22:35:06] 2025-04-17 05:34:39,442 | INFO     | PID=218412 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-16 22:35:06] 2025-04-17 05:34:39,442 | INFO     | .. there are 30 such processes running
[2025-04-16 22:35:06] 2025-04-17 05:34:40,178 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 22:35:06] 2025-04-17 05:34:40,248 | INFO     | job 6604148517 has state=finished
[2025-04-16 22:35:06] 2025-04-17 05:34:40,248 | INFO     | preparing for final server update for job 6604148517 in state='finished'
[2025-04-16 22:35:06] 2025-04-17 05:34:40,250 | INFO     | this job has now completed (state=finished)
[2025-04-16 22:35:06] 2025-04-17 05:34:40,250 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 22:35:06] 2025-04-17 05:34:40,250 | INFO     | log transfer has been attempted: DONE
[2025-04-16 22:35:06] 2025-04-17 05:34:40,250 | INFO     | job 6604148517 has finished - writing final server update
[2025-04-16 22:35:06] 2025-04-17 05:34:40,251 | INFO     | total number of processed events: 400 (read)
[2025-04-16 22:35:06] 2025-04-17 05:34:40,257 | INFO     | executing command: lscpu
[2025-04-16 22:35:06] 2025-04-17 05:34:40,320 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 22:35:06] 2025-04-17 05:34:41,420 | WARNING  | process 226403 can no longer be monitored (due to stat problems) - aborting
[2025-04-16 22:35:06] 2025-04-17 05:34:41,420 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6604148517/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 22:35:06] 2025-04-17 05:34:41,648 | INFO     | number of running child processes to parent process 226403: 1
[2025-04-16 22:35:06] 2025-04-17 05:34:41,649 | INFO     | maximum number of monitored processes: 6
[2025-04-16 22:35:06] 2025-04-17 05:34:44,151 | INFO     | monitor loop #294: job 0:6604148517 is in state 'finished'
[2025-04-16 22:35:06] 2025-04-17 05:34:44,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 22:35:06] 2025-04-17 05:34:46,276 | INFO     | CPU arch script returned: x86-64-v4
[2025-04-16 22:35:06] 2025-04-17 05:34:46,277 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6604148517/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 22:35:06] 2025-04-17 05:34:46,278 | INFO     | extracted standard info from prmon json
[2025-04-16 22:35:06] 2025-04-17 05:34:46,278 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 22:35:06] 2025-04-17 05:34:46,278 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 22:35:06] 2025-04-17 05:34:46,279 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 22:35:06] 2025-04-17 05:34:46,279 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 22:35:06] 2025-04-17 05:34:46,281 | INFO     | fitting pss+swap vs Time
[2025-04-16 22:35:06] 2025-04-17 05:34:46,282 | INFO     | sum of square deviations: 57407588.0
[2025-04-16 22:35:06] 2025-04-17 05:34:46,282 | INFO     | sum of deviations: 14835293024.999998
[2025-04-16 22:35:06] 2025-04-17 05:34:46,282 | INFO     | mean x: 1744866201.0
[2025-04-16 22:35:06] 2025-04-17 05:34:46,282 | INFO     | mean y: 2792482.789473684
[2025-04-16 22:35:06] 2025-04-17 05:34:46,283 | INFO     | -- intersect: -450906264718.03815
[2025-04-16 22:35:06] 2025-04-17 05:34:46,283 | INFO     | intersect: -450906264718.03815
[2025-04-16 22:35:06] 2025-04-17 05:34:46,283 | INFO     | chi2: 2.0295879458525934
[2025-04-16 22:35:06] 2025-04-17 05:34:46,283 | INFO     | -- intersect: -450906264718.03815
[2025-04-16 22:35:06] 2025-04-17 05:34:46,283 | INFO     | current memory leak: 258.42 B/s (using 57 data points, chi2=2.03)
[2025-04-16 22:35:06] 2025-04-17 05:34:46,284 | INFO     | ..............................
[2025-04-16 22:35:06] 2025-04-17 05:34:46,284 | INFO     | . Timing measurements:
[2025-04-16 22:35:06] 2025-04-17 05:34:46,284 | INFO     | . get job = 0 s
[2025-04-16 22:35:06] 2025-04-17 05:34:46,284 | INFO     | . initial setup = 3 s
[2025-04-16 22:35:06] 2025-04-17 05:34:46,284 | INFO     | . payload setup = 8 s
[2025-04-16 22:35:06] 2025-04-17 05:34:46,284 | INFO     | . stage-in = 0 s
[2025-04-16 22:35:06] 2025-04-17 05:34:46,284 | INFO     | . payload execution = 3890 s
[2025-04-16 22:35:06] 2025-04-17 05:34:46,285 | INFO     | . stage-out = 0 s
[2025-04-16 22:35:06] 2025-04-17 05:34:46,285 | INFO     | . log creation = 0 s
[2025-04-16 22:35:06] 2025-04-17 05:34:46,285 | INFO     | ..............................
[2025-04-16 22:35:06] 2025-04-17 05:34:46,357 | INFO     | 
[2025-04-16 22:35:06] 2025-04-17 05:34:46,357 | INFO     | job summary report
[2025-04-16 22:35:06] 2025-04-17 05:34:46,357 | INFO     | --------------------------------------------------
[2025-04-16 22:35:06] 2025-04-17 05:34:46,357 | INFO     | PanDA job id: 6604148517
[2025-04-16 22:35:06] 2025-04-17 05:34:46,358 | INFO     | task id: 44075483
[2025-04-16 22:35:06] 2025-04-17 05:34:46,358 | INFO     | errors: (none)
[2025-04-16 22:35:06] 2025-04-17 05:34:46,358 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 22:35:06] 2025-04-17 05:34:46,358 | INFO     | pilot state: finished 
[2025-04-16 22:35:06] 2025-04-17 05:34:46,358 | INFO     | transexitcode: 0
[2025-04-16 22:35:06] 2025-04-17 05:34:46,358 | INFO     | exeerrorcode: 0
[2025-04-16 22:35:06] 2025-04-17 05:34:46,358 | INFO     | exeerrordiag: 
[2025-04-16 22:35:06] 2025-04-17 05:34:46,359 | INFO     | exitcode: 0
[2025-04-16 22:35:06] 2025-04-17 05:34:46,359 | INFO     | exitmsg: OK
[2025-04-16 22:35:06] 2025-04-17 05:34:46,359 | INFO     | cpuconsumptiontime: 34059 s
[2025-04-16 22:35:06] 2025-04-17 05:34:46,359 | INFO     | nevents: 400
[2025-04-16 22:35:06] 2025-04-17 05:34:46,359 | INFO     | neventsw: 0
[2025-04-16 22:35:06] 2025-04-17 05:34:46,359 | INFO     | pid: 226403
[2025-04-16 22:35:06] 2025-04-17 05:34:46,359 | INFO     | pgrp: 226403
[2025-04-16 22:35:06] 2025-04-17 05:34:46,359 | INFO     | corecount: 12
[2025-04-16 22:35:06] 2025-04-17 05:34:46,359 | INFO     | event service: False
[2025-04-16 22:35:06] 2025-04-17 05:34:46,360 | INFO     | sizes: {0: 2417356, 1: 2417356, 7: 2417590, 11: 2417618, 3902: 2443248, 3904: 2452183, 3905: 2452367, 3912: 2452537}
[2025-04-16 22:35:06] 2025-04-17 05:34:46,360 | INFO     | --------------------------------------------------
[2025-04-16 22:35:06] 2025-04-17 05:34:46,360 | INFO     | 
[2025-04-16 22:35:06] 2025-04-17 05:34:46,360 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-04-16 22:35:06] 2025-04-17 05:34:46,387 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,387 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,388 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,388 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,388 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,388 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,388 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,388 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,388 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,389 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,389 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,389 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,389 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,389 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,389 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,389 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,389 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,390 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 22:35:06] 2025-04-17 05:34:46,390 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,390 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 22:35:06] 2025-04-17 05:34:46,390 | INFO     | job 6604148517 has completed (purged errors)
[2025-04-16 22:35:06] 2025-04-17 05:34:46,391 | INFO     | overall cleanup function is called
[2025-04-16 22:35:06] 2025-04-17 05:34:47,400 | INFO     | --- collectZombieJob: --- 10, [226403]
[2025-04-16 22:35:06] 2025-04-17 05:34:47,400 | INFO     | zombie collector waiting for pid 226403
[2025-04-16 22:35:06] 2025-04-17 05:34:47,400 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 22:35:06] 2025-04-17 05:34:47,400 | INFO     | collected zombie processes
[2025-04-16 22:35:06] 2025-04-17 05:34:47,401 | INFO     | will attempt to kill all subprocesses of pid=226403
[2025-04-16 22:35:06] 2025-04-17 05:34:47,634 | INFO     | process IDs to be killed: [226403] (in reverse order)
[2025-04-16 22:35:06] 2025-04-17 05:34:47,733 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 22:35:06] 2025-04-17 05:34:47,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 22:35:06] 2025-04-17 05:34:47,744 | INFO     | did not find any defunct processes belonging to 226403
[2025-04-16 22:35:06] 2025-04-17 05:34:47,754 | INFO     | did not find any defunct processes belonging to 226403
[2025-04-16 22:35:06] 2025-04-17 05:34:47,755 | INFO     | ready for new job
[2025-04-16 22:35:06] 2025-04-17 05:34:47,755 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 22:35:06] 2025-04-17 05:34:47,757 | INFO     | **************************************
[2025-04-16 22:35:06] 2025-04-17 05:34:47,757 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 22:35:06] 2025-04-17 05:34:47,757 | INFO     | **************************************
[2025-04-16 22:35:06] 2025-04-17 05:34:47,757 | INFO     | 
[2025-04-16 22:35:06] 2025-04-17 05:34:47,759 | INFO     | architecture information:
[2025-04-16 22:35:06] 2025-04-17 05:34:47,760 | INFO     | executing command: cat /etc/os-release
[2025-04-16 22:35:06] 2025-04-17 05:34:47,778 | INFO     | cat /etc/os-release:
[2025-04-16 22:35:06] NAME="CentOS Linux"
[2025-04-16 22:35:06] VERSION="7 (Core)"
[2025-04-16 22:35:06] ID="centos"
[2025-04-16 22:35:06] ID_LIKE="rhel fedora"
[2025-04-16 22:35:06] VERSION_ID="7"
[2025-04-16 22:35:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 22:35:06] ANSI_COLOR="0;31"
[2025-04-16 22:35:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 22:35:06] HOME_URL="https://www.centos.org/"
[2025-04-16 22:35:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 22:35:06] 
[2025-04-16 22:35:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 22:35:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 22:35:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 22:35:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 22:35:06] 
[2025-04-16 22:35:06] 2025-04-17 05:34:47,779 | INFO     | **************************************
[2025-04-16 22:35:06] 2025-04-17 05:34:48,282 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-04-16 22:35:06] 2025-04-17 05:34:48,303 | INFO     | sufficient remaining disk space (2130466308096 B)
[2025-04-16 22:35:06] 2025-04-17 05:34:48,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 22:35:06] 2025-04-17 05:34:48,304 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 22:35:06] 2025-04-17 05:34:48,304 | INFO     | update_server=False
[2025-04-16 22:35:06] 2025-04-17 05:34:48,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 22:35:06] 2025-04-17 05:34:48,305 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-16 22:35:06] 2025-04-17 05:34:48,305 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 22:35:06] 2025-04-17 05:34:48,305 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 22:35:06] 2025-04-17 05:34:48,306 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 22:35:06] 2025-04-17 05:34:48,307 | INFO     | aborting loop
[2025-04-16 22:35:06] 2025-04-17 05:34:48,307 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 22:35:06] 2025-04-17 05:34:48,307 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 22:35:06] 2025-04-17 05:34:49,224 | INFO     | all data control threads have been joined
[2025-04-16 22:35:06] 2025-04-17 05:34:49,309 | INFO     | [job] queue monitor thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:49,310 | INFO     | [job] retrieve thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:49,313 | INFO     | [job] job monitor thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:49,330 | INFO     | [job] validate thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:49,454 | INFO     | [payload] validate_post thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:49,493 | INFO     | all payload control threads have been joined
[2025-04-16 22:35:06] 2025-04-17 05:34:49,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 22:35:06] 2025-04-17 05:34:49,534 | INFO     | all job control threads have been joined
[2025-04-16 22:35:06] 2025-04-17 05:34:49,557 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:49,719 | INFO     | [payload] failed_post thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:49,838 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:50,006 | INFO     | [data] copytool_in thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:50,176 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:50,230 | INFO     | [data] control thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:50,498 | INFO     | [payload] control thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:50,537 | INFO     | [job] control thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:50,757 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 22:35:06] 2025-04-17 05:34:51,502 | INFO     | [data] copytool_out thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:54,764 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:34:59,075 | INFO     | job.realtimelogging is not enabled
[2025-04-16 22:35:06] 2025-04-17 05:35:00,078 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 22:35:06] 2025-04-17 05:35:00,767 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140114691929920)>', '<ExcThread(monitor, started 140114156046080)>']
[2025-04-16 22:35:06] 2025-04-17 05:35:01,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 22:35:06] 2025-04-17 05:35:01,357 | INFO     | [monitor] control thread has ended
[2025-04-16 22:35:06] 2025-04-17 05:35:05,771 | INFO     | all workflow threads have been joined
[2025-04-16 22:35:06] 2025-04-17 05:35:05,772 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 22:35:06] 2025-04-17 05:35:05,773 | INFO     | traces error code: 0
[2025-04-16 22:35:06] 2025-04-17 05:35:05,773 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 22:35:06] 2025-04-17 05:35:05,908 [wrapper] ==== pilot stdout END ====
[2025-04-16 22:35:06] 2025-04-17 05:35:05,912 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 22:35:06] 2025-04-17 05:35:05,916 [wrapper] pilotpid: 218412
[2025-04-16 22:35:06] 2025-04-17 05:35:05,920 [wrapper] Pilot exit status: 0
[2025-04-16 22:35:06] 2025-04-17 05:35:05,935 [wrapper] pandaids: 6604148517
[2025-04-16 22:35:06] 2025-04-17 05:35:05,997 [wrapper] cleanup supervisor_pilot  359440 218413
[2025-04-16 22:35:06] 2025-04-17 05:35:06,002 [wrapper] Test setup, not cleaning
[2025-04-16 22:35:06] 2025-04-17 05:35:06,007 [wrapper] apfmon messages muted
[2025-04-16 22:35:06] 2025-04-17 05:35:06,011 [wrapper] ==== wrapper stdout END ====
[2025-04-16 22:35:06] 2025-04-17 05:35:06,015 [wrapper] ==== wrapper stderr END ====
[2025-04-16 22:35:06]  *** Error codes and diagnostics ***
[2025-04-16 22:35:06]     "exeErrorCode": 0,
[2025-04-16 22:35:06]     "exeErrorDiag": "",
[2025-04-16 22:35:06]     "pilotErrorCode": 0,
[2025-04-16 22:35:06]     "pilotErrorDiag": "",
[2025-04-16 22:35:06]  *** Listing of results directory ***
[2025-04-16 22:35:06] total 409812
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc      5111 Apr 16 10:01 queuedata.json
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc    495897 Apr 16 10:02 pilot3.tar.gz
[2025-04-16 22:35:06] -rwx------. 1 boinc boinc     37140 Apr 16 10:04 runpilot2-wrapper.sh
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc       100 Apr 16 21:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 22:35:06] -rwxr-xr-x. 1 boinc boinc      7986 Apr 16 21:29 run_atlas
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc       105 Apr 16 21:29 job.xml
[2025-04-16 22:35:06] -rw-r--r--. 2 boinc boinc 222090061 Apr 16 21:29 EVNT.44075481._001683.pool.root.1
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc      6597 Apr 16 21:29 init_data.xml
[2025-04-16 22:35:06] -rw-r--r--. 2 boinc boinc     17569 Apr 16 21:29 start_atlas.sh
[2025-04-16 22:35:06] drwxrwx--x. 2 boinc boinc      4096 Apr 16 21:29 shared
[2025-04-16 22:35:06] -rw-r--r--. 2 boinc boinc    508894 Apr 16 21:29 input.tar.gz
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc         0 Apr 16 21:29 boinc_lockfile
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc      2575 Apr 16 21:29 pandaJob.out
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc       424 Apr 16 21:29 setup.sh.local
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc    986368 Apr 16 21:29 agis_schedconf.cvmfs.json
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc   1603529 Apr 16 21:29 agis_ddmendpoints.agis.ALL.json
[2025-04-16 22:35:06] drwx------. 4 boinc boinc      4096 Apr 16 21:29 pilot3
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc 192236735 Apr 16 22:34 HITS.44075483._042966.pool.root.1
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc       529 Apr 16 22:34 boinc_task_state.xml
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc        95 Apr 16 22:34 pilot_heartbeat.json
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc      1031 Apr 16 22:34 memory_monitor_summary.json
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc    340683 Apr 16 22:34 log.44075483._042966.job.log.tgz.1
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc      7715 Apr 16 22:34 heartbeat.json
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc      8192 Apr 16 22:34 boinc_mmap_file
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc        27 Apr 16 22:34 wrapper_checkpoint.txt
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc      4547 Apr 16 22:35 pilotlog.txt
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc    397112 Apr 16 22:35 log.44075483._042966.job.log.1
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc       357 Apr 16 22:35 output.list
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc       620 Apr 16 22:35 runtime_log
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc    757760 Apr 16 22:35 result.tar.gz
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc     11144 Apr 16 22:35 runtime_log.err
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc       657 Apr 16 22:35 QVLMDmOMLP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm5iaLDm2INzan.diag
[2025-04-16 22:35:06] -rw-r--r--. 1 boinc boinc     21726 Apr 16 22:35 stderr.txt
[2025-04-16 22:35:06] HITS file was successfully produced:
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc 192236735 Apr 16 22:34 shared/HITS.pool.root.1
[2025-04-16 22:35:06]  *** Contents of shared directory: ***
[2025-04-16 22:35:06] total 405888
[2025-04-16 22:35:06] -rw-r--r--. 2 boinc boinc 222090061 Apr 16 21:29 ATLAS.root_0
[2025-04-16 22:35:06] -rw-r--r--. 2 boinc boinc     17569 Apr 16 21:29 start_atlas.sh
[2025-04-16 22:35:06] -rw-r--r--. 2 boinc boinc    508894 Apr 16 21:29 input.tar.gz
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc 192236735 Apr 16 22:34 HITS.pool.root.1
[2025-04-16 22:35:06] -rw-------. 1 boinc boinc    757760 Apr 16 22:35 result.tar.gz
22:35:08 (212922): run_atlas exited; CPU time 34139.197574
22:35:08 (212922): called boinc_finish(0)

</stderr_txt>
]]>

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