Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:24:27 (2925112): wrapper (7.7.26015): starting
11:24:27 (2925112): wrapper: running run_atlas (--nthreads 12)
[2025-04-17 11:24:27] Arguments: --nthreads 12
[2025-04-17 11:24:27] Threads: 12
[2025-04-17 11:24:27] Checking for CVMFS
[2025-04-17 11:24:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 11:24:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 11:24:27] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 11:24:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 11:24:27] 2.12.7.0 20034 31505 102012 144955 0 56 19449592 46080001 922 130560 0 44672146 99.971 5502959 8412 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-04-17 11:24:27] CVMFS is ok
[2025-04-17 11:24:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 11:24:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 11:24:27] Further information can be found at the LHC@home message board.
[2025-04-17 11:24:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 11:24:27] Checking for apptainer binary...
[2025-04-17 11:24:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 11:24:27] Running /usr/bin/apptainer --version
[2025-04-17 11:24:27] apptainer version 1.4.0-1.el9
[2025-04-17 11:24:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 11:24:27] gpu01.farm.particle.cz
[2025-04-17 11:24:27] apptainer works
[2025-04-17 11:24:27] Set ATHENA_PROC_NUMBER=12
[2025-04-17 11:24:27] Set ATHENA_CORE_NUMBER=12
[2025-04-17 11:24:27] Starting ATLAS job with PandaID=6604148388
[2025-04-17 11:24:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 12:12:50]  *** The last 200 lines of the pilot log: ***
[2025-04-17 12:12:50]  direct_access_wan=False
[2025-04-17 12:12:50]  domain=
[2025-04-17 12:12:50]  filesize=357278
[2025-04-17 12:12:50]  filetype=log
[2025-04-17 12:12:50]  guid=76897294-6952-42c8-919d-afd9e1ec52dc
[2025-04-17 12:12:50]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-17 12:12:50]  is_altstaged=None
[2025-04-17 12:12:50]  is_tar=False
[2025-04-17 12:12:50]  lfn=log.44075483._042837.job.log.tgz.1
[2025-04-17 12:12:50]  mtime=0
[2025-04-17 12:12:50]  protocol_id=None
[2025-04-17 12:12:50]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-17 12:12:50]  replicas=None
[2025-04-17 12:12:50]  scope=mc23_13p6TeV
[2025-04-17 12:12:50]  status=None
[2025-04-17 12:12:50]  status_code=0
[2025-04-17 12:12:50]  storage_token=
[2025-04-17 12:12:50]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6604148388/log.44075483._042837.job.log.tgz.1
[2025-04-17 12:12:50]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/c4/log.44075483._042837.job.log.tgz.1
[2025-04-17 12:12:50]  workdir=None
[2025-04-17 12:12:50] ]
[2025-04-17 12:12:50] 2025-04-17 10:12:28,227 | INFO     | transferring file log.44075483._042837.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6604148388/log.44075483._042837.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-17 12:12:50] 2025-04-17 10:12:28,227 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6604148388/log.44075483._042837.job.log.tgz.1 /var/lib/boinc/slots/1/log.44075483._042837.job
[2025-04-17 12:12:50] 2025-04-17 10:12:28,240 | INFO     | adding to output.list: log.44075483._042837.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/0c/c4/log.44075483._042837.job.log.tg
[2025-04-17 12:12:50] 2025-04-17 10:12:28,241 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-17 12:12:50] 2025-04-17 10:12:28,241 | INFO     | summary of transferred files:
[2025-04-17 12:12:50] 2025-04-17 10:12:28,241 | INFO     |  -- lfn=log.44075483._042837.job.log.tgz.1, status_code=0, status=transferred
[2025-04-17 12:12:50] 2025-04-17 10:12:28,241 | INFO     | stage-out finished correctly
[2025-04-17 12:12:50] 2025-04-17 10:12:28,649 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-17 12:12:50] 2025-04-17 10:12:28,709 | INFO     | job 6604148388 has state=finished
[2025-04-17 12:12:50] 2025-04-17 10:12:28,709 | INFO     | preparing for final server update for job 6604148388 in state='finished'
[2025-04-17 12:12:50] 2025-04-17 10:12:28,710 | INFO     | this job has now completed (state=finished)
[2025-04-17 12:12:50] 2025-04-17 10:12:28,710 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-17 12:12:50] 2025-04-17 10:12:28,710 | INFO     | log transfer has been attempted: DONE
[2025-04-17 12:12:50] 2025-04-17 10:12:28,710 | INFO     | job 6604148388 has finished - writing final server update
[2025-04-17 12:12:50] 2025-04-17 10:12:28,710 | INFO     | total number of processed events: 400 (read)
[2025-04-17 12:12:50] 2025-04-17 10:12:28,713 | INFO     | executing command: lscpu
[2025-04-17 12:12:50] 2025-04-17 10:12:28,743 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-17 12:12:50] 2025-04-17 10:12:28,933 | INFO     | monitor loop #222: job 0:6604148388 is in state 'finished'
[2025-04-17 12:12:50] 2025-04-17 10:12:28,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 12:12:50] 2025-04-17 10:12:31,400 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-17 12:12:50] 2025-04-17 10:12:31,400 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6604148388/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 12:12:50] 2025-04-17 10:12:31,401 | INFO     | extracted standard info from prmon json
[2025-04-17 12:12:50] 2025-04-17 10:12:31,401 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 12:12:50] 2025-04-17 10:12:31,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 12:12:50] 2025-04-17 10:12:31,401 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 12:12:50] 2025-04-17 10:12:31,401 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 12:12:50] 2025-04-17 10:12:31,403 | INFO     | fitting pss+swap vs Time
[2025-04-17 12:12:50] 2025-04-17 10:12:31,403 | INFO     | sum of square deviations: 19832930.0
[2025-04-17 12:12:50] 2025-04-17 10:12:31,403 | INFO     | sum of deviations: 7993913207.499999
[2025-04-17 12:12:50] 2025-04-17 10:12:31,403 | INFO     | mean x: 1744883388.5
[2025-04-17 12:12:50] 2025-04-17 10:12:31,403 | INFO     | mean y: 2531701.525
[2025-04-17 12:12:50] 2025-04-17 10:12:31,403 | INFO     | -- intersect: -703294780641.0034
[2025-04-17 12:12:50] 2025-04-17 10:12:31,403 | INFO     | intersect: -703294780641.0034
[2025-04-17 12:12:50] 2025-04-17 10:12:31,403 | INFO     | chi2: 0.9090921292961305
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | -- intersect: -703294780641.0034
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | current memory leak: 403.06 B/s (using 40 data points, chi2=0.91)
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | ..............................
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | . Timing measurements:
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | . get job = 0 s
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | . initial setup = 1 s
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | . payload setup = 3 s
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | . stage-in = 0 s
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | . payload execution = 2852 s
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | . stage-out = 0 s
[2025-04-17 12:12:50] 2025-04-17 10:12:31,404 | INFO     | . log creation = 0 s
[2025-04-17 12:12:50] 2025-04-17 10:12:31,405 | INFO     | ..............................
[2025-04-17 12:12:50] 2025-04-17 10:12:31,481 | INFO     | 
[2025-04-17 12:12:50] 2025-04-17 10:12:31,481 | INFO     | job summary report
[2025-04-17 12:12:50] 2025-04-17 10:12:31,481 | INFO     | --------------------------------------------------
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | PanDA job id: 6604148388
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | task id: 44075483
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | errors: (none)
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | pilot state: finished 
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | transexitcode: 0
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | exeerrorcode: 0
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | exeerrordiag: 
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | exitcode: 0
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | exitmsg: OK
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | cpuconsumptiontime: 23820 s
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | nevents: 400
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | neventsw: 0
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | pid: 2935642
[2025-04-17 12:12:50] 2025-04-17 10:12:31,482 | INFO     | pgrp: 2935642
[2025-04-17 12:12:50] 2025-04-17 10:12:31,483 | INFO     | corecount: 12
[2025-04-17 12:12:50] 2025-04-17 10:12:31,483 | INFO     | event service: False
[2025-04-17 12:12:50] 2025-04-17 10:12:31,483 | INFO     | sizes: {0: 2426823, 3: 2427029, 11: 2427057, 2859: 2452455, 2861: 2461452, 2864: 2461566}
[2025-04-17 12:12:50] 2025-04-17 10:12:31,483 | INFO     | --------------------------------------------------
[2025-04-17 12:12:50] 2025-04-17 10:12:31,483 | INFO     | 
[2025-04-17 12:12:50] 2025-04-17 10:12:31,483 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-04-17 12:12:50] 2025-04-17 10:12:31,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,498 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,498 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,499 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 12:12:50] 2025-04-17 10:12:31,500 | INFO     | job 6604148388 has completed (purged errors)
[2025-04-17 12:12:50] 2025-04-17 10:12:31,500 | INFO     | overall cleanup function is called
[2025-04-17 12:12:50] 2025-04-17 10:12:32,508 | INFO     | --- collectZombieJob: --- 10, [2935642]
[2025-04-17 12:12:50] 2025-04-17 10:12:32,508 | INFO     | zombie collector waiting for pid 2935642
[2025-04-17 12:12:50] 2025-04-17 10:12:32,508 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 12:12:50] 2025-04-17 10:12:32,508 | INFO     | collected zombie processes
[2025-04-17 12:12:50] 2025-04-17 10:12:32,508 | INFO     | will attempt to kill all subprocesses of pid=2935642
[2025-04-17 12:12:50] 2025-04-17 10:12:32,602 | INFO     | process IDs to be killed: [2935642] (in reverse order)
[2025-04-17 12:12:50] 2025-04-17 10:12:32,642 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 12:12:50] 2025-04-17 10:12:32,643 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 12:12:50] 2025-04-17 10:12:32,646 | INFO     | did not find any defunct processes belonging to 2935642
[2025-04-17 12:12:50] 2025-04-17 10:12:32,649 | INFO     | did not find any defunct processes belonging to 2935642
[2025-04-17 12:12:50] 2025-04-17 10:12:32,649 | INFO     | ready for new job
[2025-04-17 12:12:50] 2025-04-17 10:12:32,649 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 12:12:50] 2025-04-17 10:12:32,650 | INFO     | **************************************
[2025-04-17 12:12:50] 2025-04-17 10:12:32,650 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 12:12:50] 2025-04-17 10:12:32,650 | INFO     | **************************************
[2025-04-17 12:12:50] 2025-04-17 10:12:32,650 | INFO     | 
[2025-04-17 12:12:50] 2025-04-17 10:12:32,651 | INFO     | architecture information:
[2025-04-17 12:12:50] 2025-04-17 10:12:32,651 | INFO     | executing command: cat /etc/os-release
[2025-04-17 12:12:50] 2025-04-17 10:12:32,662 | INFO     | cat /etc/os-release:
[2025-04-17 12:12:50] NAME="CentOS Linux"
[2025-04-17 12:12:50] VERSION="7 (Core)"
[2025-04-17 12:12:50] ID="centos"
[2025-04-17 12:12:50] ID_LIKE="rhel fedora"
[2025-04-17 12:12:50] VERSION_ID="7"
[2025-04-17 12:12:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 12:12:50] ANSI_COLOR="0;31"
[2025-04-17 12:12:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 12:12:50] HOME_URL="https://www.centos.org/"
[2025-04-17 12:12:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 12:12:50] 
[2025-04-17 12:12:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 12:12:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 12:12:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 12:12:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 12:12:50] 
[2025-04-17 12:12:50] 2025-04-17 10:12:32,662 | INFO     | **************************************
[2025-04-17 12:12:50] 2025-04-17 10:12:33,165 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-04-17 12:12:50] 2025-04-17 10:12:33,177 | INFO     | sufficient remaining disk space (72390541312 B)
[2025-04-17 12:12:50] 2025-04-17 10:12:33,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 12:12:50] 2025-04-17 10:12:33,177 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 12:12:50] 2025-04-17 10:12:33,177 | INFO     | update_server=False
[2025-04-17 12:12:50] 2025-04-17 10:12:33,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 12:12:50] 2025-04-17 10:12:33,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 12:12:50] 2025-04-17 10:12:33,177 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 12:12:50] 2025-04-17 10:12:33,178 | INFO     | aborting loop
[2025-04-17 12:12:50] 2025-04-17 10:12:33,498 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 12:12:50] 2025-04-17 10:12:33,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 12:12:50] 2025-04-17 10:12:33,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 12:12:50] 2025-04-17 10:12:33,541 | INFO     | all data control threads have been joined
[2025-04-17 12:12:50] 2025-04-17 10:12:33,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 12:12:50] 2025-04-17 10:12:33,823 | INFO     | all payload control threads have been joined
[2025-04-17 12:12:50] 2025-04-17 10:12:34,182 | INFO     | [job] retrieve thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:34,183 | INFO     | [job] queue monitor thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:34,184 | INFO     | [job] job monitor thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:34,204 | INFO     | [payload] validate_post thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:34,425 | INFO     | all job control threads have been joined
[2025-04-17 12:12:50] 2025-04-17 10:12:34,546 | INFO     | [data] control thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:34,714 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 12:12:50] 2025-04-17 10:12:34,828 | INFO     | [payload] control thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:34,951 | INFO     | [payload] failed_post thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:35,253 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:35,278 | INFO     | [data] copytool_in thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:35,308 | INFO     | [job] validate thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:35,429 | INFO     | [job] control thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:35,493 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:35,601 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:35,807 | INFO     | [data] copytool_out thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:38,720 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:44,111 | INFO     | job.realtimelogging is not enabled
[2025-04-17 12:12:50] 2025-04-17 10:12:45,116 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 12:12:50] 2025-04-17 10:12:45,390 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650859657024)>', '<ExcThread(monitor, started 140650230044416)>']
[2025-04-17 12:12:50] 2025-04-17 10:12:45,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 12:12:50] 2025-04-17 10:12:45,556 | INFO     | [monitor] control thread has ended
[2025-04-17 12:12:50] 2025-04-17 10:12:50,416 | INFO     | all workflow threads have been joined
[2025-04-17 12:12:50] 2025-04-17 10:12:50,416 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 12:12:50] 2025-04-17 10:12:50,416 | INFO     | traces error code: 0
[2025-04-17 12:12:50] 2025-04-17 10:12:50,416 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 12:12:50] 2025-04-17 10:12:50,505 [wrapper] ==== pilot stdout END ====
[2025-04-17 12:12:50] 2025-04-17 10:12:50,507 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 12:12:50] 2025-04-17 10:12:50,509 [wrapper] pilotpid: 2928918
[2025-04-17 12:12:50] 2025-04-17 10:12:50,511 [wrapper] Pilot exit status: 0
[2025-04-17 12:12:50] 2025-04-17 10:12:50,519 [wrapper] pandaids: 6604148388
[2025-04-17 12:12:50] 2025-04-17 10:12:50,544 [wrapper] cleanup supervisor_pilot 2993056 2928919
[2025-04-17 12:12:50] 2025-04-17 10:12:50,546 [wrapper] Test setup, not cleaning
[2025-04-17 12:12:50] 2025-04-17 10:12:50,547 [wrapper] apfmon messages muted
[2025-04-17 12:12:50] 2025-04-17 10:12:50,549 [wrapper] ==== wrapper stdout END ====
[2025-04-17 12:12:50] 2025-04-17 10:12:50,551 [wrapper] ==== wrapper stderr END ====
[2025-04-17 12:12:50]  *** Error codes and diagnostics ***
[2025-04-17 12:12:50]     "exeErrorCode": 0,
[2025-04-17 12:12:50]     "exeErrorDiag": "",
[2025-04-17 12:12:50]     "pilotErrorCode": 0,
[2025-04-17 12:12:50]     "pilotErrorDiag": "",
[2025-04-17 12:12:50]  *** Listing of results directory ***
[2025-04-17 12:12:50] total 419300
[2025-04-17 12:12:50] -rwx------ 1 boinc boinc     37140 Apr 16 18:48 runpilot2-wrapper.sh
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc      5111 Apr 16 18:48 queuedata.json
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc    495897 Apr 16 18:48 pilot3.tar.gz
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc       100 Apr 17 11:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 12:12:50] -rwxr-xr-x 1 boinc boinc      7986 Apr 17 11:24 run_atlas
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc       105 Apr 17 11:24 job.xml
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc      9434 Apr 17 11:24 init_data.xml
[2025-04-17 12:12:50] -rw-r--r-- 2 boinc boinc 226268456 Apr 17 11:24 EVNT.44075481._001677.pool.root.1
[2025-04-17 12:12:50] -rw-r--r-- 2 boinc boinc     17569 Apr 17 11:24 start_atlas.sh
[2025-04-17 12:12:50] drwxrwx--x 2 boinc boinc      4096 Apr 17 11:24 shared
[2025-04-17 12:12:50] -rw-r--r-- 2 boinc boinc    508880 Apr 17 11:24 input.tar.gz
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc         0 Apr 17 11:24 boinc_lockfile
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc      2578 Apr 17 11:24 pandaJob.out
[2025-04-17 12:12:50] -rw------- 1 boinc boinc       424 Apr 17 11:24 setup.sh.local
[2025-04-17 12:12:50] -rw------- 1 boinc boinc    990239 Apr 17 11:24 agis_schedconf.cvmfs.json
[2025-04-17 12:12:50] -rw------- 1 boinc boinc   1618536 Apr 17 11:24 agis_ddmendpoints.agis.ALL.json
[2025-04-17 12:12:50] drwx------ 4 boinc boinc      4096 Apr 17 11:24 pilot3
[2025-04-17 12:12:50] -rw------- 1 boinc boinc        95 Apr 17 12:11 pilot_heartbeat.json
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc       529 Apr 17 12:12 boinc_task_state.xml
[2025-04-17 12:12:50] -rw------- 1 boinc boinc 197891903 Apr 17 12:12 HITS.44075483._042837.pool.root.1
[2025-04-17 12:12:50] -rw------- 1 boinc boinc      1030 Apr 17 12:12 memory_monitor_summary.json
[2025-04-17 12:12:50] -rw------- 1 boinc boinc    357278 Apr 17 12:12 log.44075483._042837.job.log.tgz.1
[2025-04-17 12:12:50] -rw------- 1 boinc boinc      7688 Apr 17 12:12 heartbeat.json
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc      8192 Apr 17 12:12 boinc_mmap_file
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc        27 Apr 17 12:12 wrapper_checkpoint.txt
[2025-04-17 12:12:50] -rw------- 1 boinc boinc      4425 Apr 17 12:12 pilotlog.txt
[2025-04-17 12:12:50] -rw------- 1 boinc boinc    309342 Apr 17 12:12 log.44075483._042837.job.log.1
[2025-04-17 12:12:50] -rw------- 1 boinc boinc       357 Apr 17 12:12 output.list
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc       620 Apr 17 12:12 runtime_log
[2025-04-17 12:12:50] -rw------- 1 boinc boinc    686080 Apr 17 12:12 result.tar.gz
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc     11050 Apr 17 12:12 runtime_log.err
[2025-04-17 12:12:50] -rw------- 1 boinc boinc       658 Apr 17 12:12 nw7LDmN7KP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmkp2KDmBrTWHm.diag
[2025-04-17 12:12:50] -rw-r--r-- 1 boinc boinc     20910 Apr 17 12:12 stderr.txt
[2025-04-17 12:12:50] HITS file was successfully produced:
[2025-04-17 12:12:50] -rw------- 1 boinc boinc 197891903 Apr 17 12:12 shared/HITS.pool.root.1
[2025-04-17 12:12:50]  *** Contents of shared directory: ***
[2025-04-17 12:12:50] total 415420
[2025-04-17 12:12:50] -rw-r--r-- 2 boinc boinc 226268456 Apr 17 11:24 ATLAS.root_0
[2025-04-17 12:12:50] -rw-r--r-- 2 boinc boinc     17569 Apr 17 11:24 start_atlas.sh
[2025-04-17 12:12:50] -rw-r--r-- 2 boinc boinc    508880 Apr 17 11:24 input.tar.gz
[2025-04-17 12:12:50] -rw------- 1 boinc boinc 197891903 Apr 17 12:12 HITS.pool.root.1
[2025-04-17 12:12:50] -rw------- 1 boinc boinc    686080 Apr 17 12:12 result.tar.gz
12:12:52 (2925112): run_atlas exited; CPU time 23838.940384
12:12:52 (2925112): called boinc_finish(0)

</stderr_txt>
]]>

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