Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
07:17:46 (249576): wrapper (7.7.26015): starting
07:17:46 (249576): wrapper: running run_atlas (--nthreads 3)
[2025-04-17 07:17:46] Arguments: --nthreads 3
[2025-04-17 07:17:46] Threads: 3
[2025-04-17 07:17:46] Checking for CVMFS
[2025-04-17 07:17:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 07:17:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 07:17:46] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 07:17:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 07:17:46] 2.9.2.0 2917 876 70648 144950 1 55 18595362 36864001 0 130560 0 645770 99.988 296939 3155 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-17 07:17:46] CVMFS is ok
[2025-04-17 07:17:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-17 07:17:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-17 07:17:46] Further information can be found at the LHC@home message board.
[2025-04-17 07:17:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 07:17:46] Checking for apptainer binary...
[2025-04-17 07:17:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 07:17:46] Running /usr/bin/apptainer --version
[2025-04-17 07:17:46] apptainer version 1.3.6-6.1
[2025-04-17 07:17:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 07:17:46] thA331b
[2025-04-17 07:17:46] apptainer works
[2025-04-17 07:17:46] Set ATHENA_PROC_NUMBER=3
[2025-04-17 07:17:46] Set ATHENA_CORE_NUMBER=3
[2025-04-17 07:17:46] Starting ATLAS job with PandaID=6604115370
[2025-04-17 07:17:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 08:41:51]  *** The last 200 lines of the pilot log: ***
[2025-04-17 08:41:51]  lfn=log.44075483._042177.job.log.tgz.1
[2025-04-17 08:41:51]  mtime=0
[2025-04-17 08:41:51]  protocol_id=None
[2025-04-17 08:41:51]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-17 08:41:51]  replicas=None
[2025-04-17 08:41:51]  scope=mc23_13p6TeV
[2025-04-17 08:41:51]  status=None
[2025-04-17 08:41:51]  status_code=0
[2025-04-17 08:41:51]  storage_token=
[2025-04-17 08:41:51]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6604115370/log.44075483._042177.job.log.tgz.1
[2025-04-17 08:41:51]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/7a/log.44075483._042177.job.log.tgz.1
[2025-04-17 08:41:51]  workdir=None
[2025-04-17 08:41:51] ]
[2025-04-17 08:41:51] 2025-04-17 06:41:23,734 | INFO     | transferring file log.44075483._042177.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6604115370/log.44075483._042177.job.log.tgz.1 to /local/data/boinc/
[2025-04-17 08:41:51] 2025-04-17 06:41:23,734 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6604115370/log.44075483._042177.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0421
[2025-04-17 08:41:51] 2025-04-17 06:41:23,746 | INFO     | adding to output.list: log.44075483._042177.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/7a/log.44075483._042177.job.log.tg
[2025-04-17 08:41:51] 2025-04-17 06:41:23,747 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-17 08:41:51] 2025-04-17 06:41:23,747 | INFO     | summary of transferred files:
[2025-04-17 08:41:51] 2025-04-17 06:41:23,747 | INFO     |  -- lfn=log.44075483._042177.job.log.tgz.1, status_code=0, status=transferred
[2025-04-17 08:41:51] 2025-04-17 06:41:23,747 | INFO     | stage-out finished correctly
[2025-04-17 08:41:51] 2025-04-17 06:41:24,740 | INFO     | monitor loop #387: job 0:6604115370 is in state 'finished'
[2025-04-17 08:41:51] 2025-04-17 06:41:24,741 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 08:41:51] 2025-04-17 06:41:25,787 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-17 08:41:51] 2025-04-17 06:41:27,245 | INFO     | monitor loop #388: job 0:6604115370 is in state 'finished'
[2025-04-17 08:41:51] 2025-04-17 06:41:27,246 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 08:41:51] 2025-04-17 06:41:28,611 | INFO     | job 6604115370 has state=finished
[2025-04-17 08:41:51] 2025-04-17 06:41:28,612 | INFO     | preparing for final server update for job 6604115370 in state='finished'
[2025-04-17 08:41:51] 2025-04-17 06:41:28,612 | INFO     | this job has now completed (state=finished)
[2025-04-17 08:41:51] 2025-04-17 06:41:28,612 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-17 08:41:51] 2025-04-17 06:41:28,612 | INFO     | log transfer has been attempted: DONE
[2025-04-17 08:41:51] 2025-04-17 06:41:28,612 | INFO     | job 6604115370 has finished - writing final server update
[2025-04-17 08:41:51] 2025-04-17 06:41:28,613 | INFO     | total number of processed events: 400 (read)
[2025-04-17 08:41:51] 2025-04-17 06:41:28,614 | INFO     | executing command: lscpu
[2025-04-17 08:41:51] 2025-04-17 06:41:28,629 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-17 08:41:51] 2025-04-17 06:41:29,659 | INFO     | PID=253226 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-04-17 08:41:51] 2025-04-17 06:41:29,749 | INFO     | monitor loop #389: job 0:6604115370 is in state 'finished'
[2025-04-17 08:41:51] 2025-04-17 06:41:29,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 08:41:51] 2025-04-17 06:41:32,252 | INFO     | monitor loop #390: job 0:6604115370 is in state 'finished'
[2025-04-17 08:41:51] 2025-04-17 06:41:32,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-17 08:41:51] 2025-04-17 06:41:32,405 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-17 08:41:51] 2025-04-17 06:41:32,406 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6604115370/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 08:41:51] 2025-04-17 06:41:32,406 | INFO     | extracted standard info from prmon json
[2025-04-17 08:41:51] 2025-04-17 06:41:32,406 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 08:41:51] 2025-04-17 06:41:32,406 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 08:41:51] 2025-04-17 06:41:32,406 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 08:41:51] 2025-04-17 06:41:32,406 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 08:41:51] 2025-04-17 06:41:32,407 | INFO     | fitting pss+swap vs Time
[2025-04-17 08:41:51] 2025-04-17 06:41:32,407 | INFO     | sum of square deviations: 130793150.0
[2025-04-17 08:41:51] 2025-04-17 06:41:32,407 | INFO     | sum of deviations: 2357894549.0000005
[2025-04-17 08:41:51] 2025-04-17 06:41:32,407 | INFO     | mean x: 1744869653.0
[2025-04-17 08:41:51] 2025-04-17 06:41:32,407 | INFO     | mean y: 2405584.973333333
[2025-04-17 08:41:51] 2025-04-17 06:41:32,407 | INFO     | -- intersect: -31453512737.38699
[2025-04-17 08:41:51] 2025-04-17 06:41:32,407 | INFO     | intersect: -31453512737.38699
[2025-04-17 08:41:51] 2025-04-17 06:41:32,407 | INFO     | chi2: 1.0431989161370459
[2025-04-17 08:41:51] 2025-04-17 06:41:32,407 | INFO     | -- intersect: -31453512737.38699
[2025-04-17 08:41:51] 2025-04-17 06:41:32,407 | INFO     | current memory leak: 18.03 B/s (using 75 data points, chi2=1.04)
[2025-04-17 08:41:51] 2025-04-17 06:41:32,408 | INFO     | ..............................
[2025-04-17 08:41:51] 2025-04-17 06:41:32,408 | INFO     | . Timing measurements:
[2025-04-17 08:41:51] 2025-04-17 06:41:32,408 | INFO     | . get job = 0 s
[2025-04-17 08:41:51] 2025-04-17 06:41:32,408 | INFO     | . initial setup = 1 s
[2025-04-17 08:41:51] 2025-04-17 06:41:32,408 | INFO     | . payload setup = 2 s
[2025-04-17 08:41:51] 2025-04-17 06:41:32,408 | INFO     | . stage-in = 0 s
[2025-04-17 08:41:51] 2025-04-17 06:41:32,408 | INFO     | . payload execution = 4990 s
[2025-04-17 08:41:51] 2025-04-17 06:41:32,408 | INFO     | . stage-out = 0 s
[2025-04-17 08:41:51] 2025-04-17 06:41:32,408 | INFO     | . log creation = 0 s
[2025-04-17 08:41:51] 2025-04-17 06:41:32,408 | INFO     | ..............................
[2025-04-17 08:41:51] 2025-04-17 06:41:32,438 | INFO     | 
[2025-04-17 08:41:51] 2025-04-17 06:41:32,438 | INFO     | job summary report
[2025-04-17 08:41:51] 2025-04-17 06:41:32,438 | INFO     | --------------------------------------------------
[2025-04-17 08:41:51] 2025-04-17 06:41:32,438 | INFO     | PanDA job id: 6604115370
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | task id: 44075483
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | errors: (none)
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | pilot state: finished 
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | transexitcode: 0
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | exeerrorcode: 0
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | exeerrordiag: 
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | exitcode: 0
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | exitmsg: OK
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | cpuconsumptiontime: 13036 s
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | nevents: 400
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | neventsw: 0
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | pid: 259657
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | pgrp: 259657
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | corecount: 3
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | event service: False
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | sizes: {0: 2417369, 3: 2417575, 11: 2417603, 4997: 2443948, 4999: 2452895, 5001: 2452951, 5008: 2453249}
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | --------------------------------------------------
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | 
[2025-04-17 08:41:51] 2025-04-17 06:41:32,439 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-17 08:41:51] 2025-04-17 06:41:32,451 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,451 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,451 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,451 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,451 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,451 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,451 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,451 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,451 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | job 6604115370 has completed (purged errors)
[2025-04-17 08:41:51] 2025-04-17 06:41:32,452 | INFO     | overall cleanup function is called
[2025-04-17 08:41:51] 2025-04-17 06:41:33,458 | INFO     | --- collectZombieJob: --- 10, [259657]
[2025-04-17 08:41:51] 2025-04-17 06:41:33,459 | INFO     | zombie collector waiting for pid 259657
[2025-04-17 08:41:51] 2025-04-17 06:41:33,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 08:41:51] 2025-04-17 06:41:33,459 | INFO     | collected zombie processes
[2025-04-17 08:41:51] 2025-04-17 06:41:33,459 | INFO     | will attempt to kill all subprocesses of pid=259657
[2025-04-17 08:41:51] 2025-04-17 06:41:33,501 | INFO     | process IDs to be killed: [259657] (in reverse order)
[2025-04-17 08:41:51] 2025-04-17 06:41:33,524 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 08:41:51] 2025-04-17 06:41:33,524 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 08:41:51] 2025-04-17 06:41:33,525 | INFO     | did not find any defunct processes belonging to 259657
[2025-04-17 08:41:51] 2025-04-17 06:41:33,526 | INFO     | did not find any defunct processes belonging to 259657
[2025-04-17 08:41:51] 2025-04-17 06:41:33,526 | INFO     | ready for new job
[2025-04-17 08:41:51] 2025-04-17 06:41:33,526 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 08:41:51] 2025-04-17 06:41:33,527 | INFO     | **************************************
[2025-04-17 08:41:51] 2025-04-17 06:41:33,527 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 08:41:51] 2025-04-17 06:41:33,527 | INFO     | **************************************
[2025-04-17 08:41:51] 2025-04-17 06:41:33,527 | INFO     | 
[2025-04-17 08:41:51] 2025-04-17 06:41:33,527 | INFO     | architecture information:
[2025-04-17 08:41:51] 2025-04-17 06:41:33,528 | INFO     | executing command: cat /etc/os-release
[2025-04-17 08:41:51] 2025-04-17 06:41:33,536 | INFO     | cat /etc/os-release:
[2025-04-17 08:41:51] NAME="CentOS Linux"
[2025-04-17 08:41:51] VERSION="7 (Core)"
[2025-04-17 08:41:51] ID="centos"
[2025-04-17 08:41:51] ID_LIKE="rhel fedora"
[2025-04-17 08:41:51] VERSION_ID="7"
[2025-04-17 08:41:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 08:41:51] ANSI_COLOR="0;31"
[2025-04-17 08:41:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 08:41:51] HOME_URL="https://www.centos.org/"
[2025-04-17 08:41:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 08:41:51] 
[2025-04-17 08:41:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 08:41:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 08:41:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 08:41:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 08:41:51] 
[2025-04-17 08:41:51] 2025-04-17 06:41:33,536 | INFO     | **************************************
[2025-04-17 08:41:51] 2025-04-17 06:41:34,039 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-17 08:41:51] 2025-04-17 06:41:34,051 | INFO     | sufficient remaining disk space (241172480000 B)
[2025-04-17 08:41:51] 2025-04-17 06:41:34,051 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 08:41:51] 2025-04-17 06:41:34,051 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 08:41:51] 2025-04-17 06:41:34,051 | INFO     | update_server=False
[2025-04-17 08:41:51] 2025-04-17 06:41:34,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 08:41:51] 2025-04-17 06:41:34,051 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 08:41:51] 2025-04-17 06:41:34,051 | INFO     | aborting loop
[2025-04-17 08:41:51] 2025-04-17 06:41:34,051 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 08:41:51] 2025-04-17 06:41:34,051 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 08:41:51] 2025-04-17 06:41:34,051 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 08:41:51] 2025-04-17 06:41:34,052 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 08:41:51] 2025-04-17 06:41:34,052 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 08:41:51] 2025-04-17 06:41:34,293 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 08:41:51] 2025-04-17 06:41:34,731 | INFO     | all data control threads have been joined
[2025-04-17 08:41:51] 2025-04-17 06:41:35,057 | INFO     | [job] retrieve thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:35,057 | INFO     | [job] job monitor thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:35,057 | INFO     | [job] queue monitor thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:35,149 | INFO     | [payload] failed_post thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:35,170 | INFO     | all payload control threads have been joined
[2025-04-17 08:41:51] 2025-04-17 06:41:35,254 | INFO     | all job control threads have been joined
[2025-04-17 08:41:51] 2025-04-17 06:41:35,737 | INFO     | [data] control thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:35,768 | INFO     | [data] copytool_in thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:35,809 | INFO     | [payload] validate_post thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:36,176 | INFO     | [payload] control thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:36,260 | INFO     | [job] control thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:36,299 | INFO     | [data] copytool_out thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:36,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 08:41:51] 2025-04-17 06:41:36,346 | INFO     | [job] validate thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:36,385 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:36,386 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:36,473 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:40,336 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:44,799 | INFO     | job.realtimelogging is not enabled
[2025-04-17 08:41:51] 2025-04-17 06:41:45,805 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 08:41:51] 2025-04-17 06:41:46,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139718852155200)>', '<ExcThread(monitor, started 139718213748480)>']
[2025-04-17 08:41:51] 2025-04-17 06:41:47,121 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 08:41:51] 2025-04-17 06:41:47,121 | INFO     | [monitor] control thread has ended
[2025-04-17 08:41:51] 2025-04-17 06:41:51,420 | INFO     | all workflow threads have been joined
[2025-04-17 08:41:51] 2025-04-17 06:41:51,420 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 08:41:51] 2025-04-17 06:41:51,420 | INFO     | traces error code: 0
[2025-04-17 08:41:51] 2025-04-17 06:41:51,420 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 08:41:51] 2025-04-17 06:41:51,469 [wrapper] ==== pilot stdout END ====
[2025-04-17 08:41:51] 2025-04-17 06:41:51,471 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 08:41:51] 2025-04-17 06:41:51,474 [wrapper] pilotpid: 253226
[2025-04-17 08:41:51] 2025-04-17 06:41:51,476 [wrapper] Pilot exit status: 0
[2025-04-17 08:41:51] 2025-04-17 06:41:51,483 [wrapper] pandaids: 6604115370
[2025-04-17 08:41:51] 2025-04-17 06:41:51,498 [wrapper] cleanup supervisor_pilot  271397 253227
[2025-04-17 08:41:51] 2025-04-17 06:41:51,500 [wrapper] Test setup, not cleaning
[2025-04-17 08:41:51] 2025-04-17 06:41:51,503 [wrapper] apfmon messages muted
[2025-04-17 08:41:51] 2025-04-17 06:41:51,505 [wrapper] ==== wrapper stdout END ====
[2025-04-17 08:41:51] 2025-04-17 06:41:51,507 [wrapper] ==== wrapper stderr END ====
[2025-04-17 08:41:51]  *** Error codes and diagnostics ***
[2025-04-17 08:41:51]     "exeErrorCode": 0,
[2025-04-17 08:41:51]     "exeErrorDiag": "",
[2025-04-17 08:41:51]     "pilotErrorCode": 0,
[2025-04-17 08:41:51]     "pilotErrorDiag": "",
[2025-04-17 08:41:51]  *** Listing of results directory ***
[2025-04-17 08:41:51] total 410652
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc    495897 Apr 16 17:16 pilot3.tar.gz
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc      5111 Apr 16 17:36 queuedata.json
[2025-04-17 08:41:51] -rwx------ 1 boinc boinc     37140 Apr 16 17:38 runpilot2-wrapper.sh
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc       100 Apr 17 07:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 08:41:51] -rwxr-xr-x 1 boinc boinc      7986 Apr 17 07:17 run_atlas
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc       105 Apr 17 07:17 job.xml
[2025-04-17 08:41:51] -rw-r--r-- 2 boinc boinc 224026407 Apr 17 07:17 EVNT.44075481._001651.pool.root.1
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc      6924 Apr 17 07:17 init_data.xml
[2025-04-17 08:41:51] drwxrwx--x 2 boinc boinc      4096 Apr 17 07:17 shared
[2025-04-17 08:41:51] -rw-r--r-- 2 boinc boinc    508894 Apr 17 07:17 input.tar.gz
[2025-04-17 08:41:51] -rw-r--r-- 2 boinc boinc     17569 Apr 17 07:17 start_atlas.sh
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc         0 Apr 17 07:17 boinc_lockfile
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc      2579 Apr 17 07:17 pandaJob.out
[2025-04-17 08:41:51] -rw------- 1 boinc boinc       424 Apr 17 07:17 setup.sh.local
[2025-04-17 08:41:51] -rw------- 1 boinc boinc    986416 Apr 17 07:17 agis_schedconf.cvmfs.json
[2025-04-17 08:41:51] -rw------- 1 boinc boinc   1603529 Apr 17 07:17 agis_ddmendpoints.agis.ALL.json
[2025-04-17 08:41:51] drwx------ 4 boinc boinc      4096 Apr 17 07:17 pilot3
[2025-04-17 08:41:51] -rw------- 1 boinc boinc 191178631 Apr 17 08:41 HITS.44075483._042177.pool.root.1
[2025-04-17 08:41:51] -rw------- 1 boinc boinc        95 Apr 17 08:41 pilot_heartbeat.json
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc       529 Apr 17 08:41 boinc_task_state.xml
[2025-04-17 08:41:51] -rw------- 1 boinc boinc      1021 Apr 17 08:41 memory_monitor_summary.json
[2025-04-17 08:41:51] -rw------- 1 boinc boinc    239729 Apr 17 08:41 log.44075483._042177.job.log.tgz.1
[2025-04-17 08:41:51] -rw------- 1 boinc boinc      7666 Apr 17 08:41 heartbeat.json
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc      8192 Apr 17 08:41 boinc_mmap_file
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc        27 Apr 17 08:41 wrapper_checkpoint.txt
[2025-04-17 08:41:51] -rw------- 1 boinc boinc      4552 Apr 17 08:41 pilotlog.txt
[2025-04-17 08:41:51] -rw------- 1 boinc boinc    487742 Apr 17 08:41 log.44075483._042177.job.log.1
[2025-04-17 08:41:51] -rw------- 1 boinc boinc       357 Apr 17 08:41 output.list
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc       620 Apr 17 08:41 runtime_log
[2025-04-17 08:41:51] -rw------- 1 boinc boinc    747520 Apr 17 08:41 result.tar.gz
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc     11104 Apr 17 08:41 runtime_log.err
[2025-04-17 08:41:51] -rw------- 1 boinc boinc       659 Apr 17 08:41 469LDm30JP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgbaLDmuoWyYn.diag
[2025-04-17 08:41:51] -rw-r--r-- 1 boinc boinc     21657 Apr 17 08:41 stderr.txt
[2025-04-17 08:41:51] HITS file was successfully produced:
[2025-04-17 08:41:51] -rw------- 1 boinc boinc 191178631 Apr 17 08:41 shared/HITS.pool.root.1
[2025-04-17 08:41:51]  *** Contents of shared directory: ***
[2025-04-17 08:41:51] total 406736
[2025-04-17 08:41:51] -rw-r--r-- 2 boinc boinc 224026407 Apr 17 07:17 ATLAS.root_0
[2025-04-17 08:41:51] -rw-r--r-- 2 boinc boinc    508894 Apr 17 07:17 input.tar.gz
[2025-04-17 08:41:51] -rw-r--r-- 2 boinc boinc     17569 Apr 17 07:17 start_atlas.sh
[2025-04-17 08:41:51] -rw------- 1 boinc boinc 191178631 Apr 17 08:41 HITS.pool.root.1
[2025-04-17 08:41:51] -rw------- 1 boinc boinc    747520 Apr 17 08:41 result.tar.gz
08:41:53 (249576): run_atlas exited; CPU time 13054.077791
08:41:53 (249576): called boinc_finish(0)

</stderr_txt>
]]>

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