Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:28:56 (3727339): wrapper (7.7.26015): starting
20:28:56 (3727339): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 20:28:56] Arguments: --nthreads 12
[2025-04-16 20:28:56] Threads: 12
[2025-04-16 20:28:56] Checking for CVMFS
[2025-04-16 20:28:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 20:28:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 20:28:56] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 20:28:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 20:28:57] 2.12.6.0 4038419 8151 122964 144937 3 186 3775498 4096000 14520 130560 0 71669166 99.984 2235556 380 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.230:3128 1
[2025-04-16 20:28:57] CVMFS is ok
[2025-04-16 20:28:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 20:28:57] Checking for apptainer binary...
[2025-04-16 20:28:57] apptainer is not installed, using version from CVMFS
[2025-04-16 20:28:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 20:28:57] epyc7v12
[2025-04-16 20:28:57] apptainer works
[2025-04-16 20:28:57] Set ATHENA_PROC_NUMBER=12
[2025-04-16 20:28:57] Set ATHENA_CORE_NUMBER=12
[2025-04-16 20:28:57] Starting ATLAS job with PandaID=6603900913
[2025-04-16 20:28:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/opt/boinc/instance_homes/boinc_31417/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 22:39:36]  *** The last 200 lines of the pilot log: ***
[2025-04-16 22:39:36] 2025-04-16 22:39:23,842 | INFO     | mean y: 2547728.5284552844
[2025-04-16 22:39:36] 2025-04-16 22:39:23,842 | INFO     | -- intersect: -142467372984.4856
[2025-04-16 22:39:36] 2025-04-16 22:39:23,842 | INFO     | intersect: -142467372984.4856
[2025-04-16 22:39:36] 2025-04-16 22:39:23,842 | INFO     | chi2: 2.192080685591438
[2025-04-16 22:39:36] 2025-04-16 22:39:23,842 | INFO     | current chi2=2.192080685591438 (change=55.519161196608 %)
[2025-04-16 22:39:36] 2025-04-16 22:39:23,842 | INFO     | sum of square deviations: 509440249.5
[2025-04-16 22:39:36] 2025-04-16 22:39:23,843 | INFO     | sum of deviations: 18059209362.500004
[2025-04-16 22:39:36] 2025-04-16 22:39:23,843 | INFO     | mean x: 1744839556.5
[2025-04-16 22:39:36] 2025-04-16 22:39:23,843 | INFO     | mean y: 2613351.1440677964
[2025-04-16 22:39:36] 2025-04-16 22:39:23,843 | INFO     | -- intersect: -61850416294.1022
[2025-04-16 22:39:36] 2025-04-16 22:39:23,843 | INFO     | intersect: -61850416294.1022
[2025-04-16 22:39:36] 2025-04-16 22:39:23,843 | INFO     | chi2: 0.36753363706336145
[2025-04-16 22:39:36] 2025-04-16 22:39:23,843 | INFO     | current chi2=0.36753363706336145 (change=83.23357167100815 %)
[2025-04-16 22:39:36] 2025-04-16 22:39:23,843 | INFO     | sum of square deviations: 447383272.0
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | sum of deviations: 6191768705.000001
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | mean x: 1744839709.0
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | mean y: 2642364.4424778763
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | -- intersect: -24145877666.560173
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | intersect: -24145877666.560173
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | chi2: 0.07199807188346627
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | current chi2=0.07199807188346627 (change=80.41048094026452 %)
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | sum of square deviations: 390582207.0
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | sum of deviations: 1827352203.5000005
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | mean x: 1744839861.5
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | mean y: 2653864.712962963
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | -- intersect: -8160639056.786303
[2025-04-16 22:39:36] 2025-04-16 22:39:23,844 | INFO     | intersect: -8160639056.786303
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | chi2: 0.0007217667141297293
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | current chi2=0.0007217667141297293 (change=98.99751938454969 %)
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | sum of square deviations: 338804492.0
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | sum of deviations: 1257214575.0000002
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | mean x: 1744840014.0
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | mean y: 2655533.203883495
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | -- intersect: -6471987951.286884
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | intersect: -6471987951.286884
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | chi2: 0.0003234166427590739
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | current chi2=0.0003234166427590739 (change=55.19097286870125 %)
[2025-04-16 22:39:36] 2025-04-16 22:39:23,845 | INFO     | sum of square deviations: 291817564.5
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | sum of deviations: 958067952.0
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | mean x: 1744840166.5
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | mean y: 2656499.224489796
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | -- intersect: -5725838451.89417
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | intersect: -5725838451.89417
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | chi2: 0.0002578432422984913
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | current chi2=0.0002578432422984913 (change=20.2752090619625 %)
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | left removable region: 60
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | sum of square deviations: 73882315.5
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | sum of deviations: 180186436.0
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | mean x: 1744840898.5
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | mean y: 2659360.7741935486
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | -- intersect: -4252711640.527907
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | intersect: -4252711640.527907
[2025-04-16 22:39:36] 2025-04-16 22:39:23,846 | INFO     | chi2: 3.446092226481521e-05
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | -- intersect: -4252711640.527907
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | current memory leak: 2.44 B/s (using 62 data points, chi2=0.00)
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | ..............................
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | . Timing measurements:
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | . get job = 0 s
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | . initial setup = 1 s
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | . payload setup = 7 s
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | . stage-in = 0 s
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | . payload execution = 7777 s
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | . stage-out = 0 s
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | . log creation = 0 s
[2025-04-16 22:39:36] 2025-04-16 22:39:23,847 | INFO     | ..............................
[2025-04-16 22:39:36] 2025-04-16 22:39:24,181 | INFO     | 
[2025-04-16 22:39:36] 2025-04-16 22:39:24,182 | INFO     | job summary report
[2025-04-16 22:39:36] 2025-04-16 22:39:24,182 | INFO     | --------------------------------------------------
[2025-04-16 22:39:36] 2025-04-16 22:39:24,182 | INFO     | PanDA job id: 6603900913
[2025-04-16 22:39:36] 2025-04-16 22:39:24,182 | INFO     | task id: 44075483
[2025-04-16 22:39:36] 2025-04-16 22:39:24,182 | INFO     | errors: (none)
[2025-04-16 22:39:36] 2025-04-16 22:39:24,182 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 22:39:36] 2025-04-16 22:39:24,182 | INFO     | pilot state: finished 
[2025-04-16 22:39:36] 2025-04-16 22:39:24,182 | INFO     | transexitcode: 0
[2025-04-16 22:39:36] 2025-04-16 22:39:24,182 | INFO     | exeerrorcode: 0
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | exeerrordiag: 
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | exitcode: 0
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | exitmsg: OK
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | cpuconsumptiontime: 44664 s
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | nevents: 400
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | neventsw: 0
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | pid: 3751042
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | pgrp: 3751042
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | corecount: 12
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | event service: False
[2025-04-16 22:39:36] 2025-04-16 22:39:24,183 | INFO     | sizes: {0: 2417389, 6: 2417595, 11: 2417623, 7788: 2445229, 7789: 2454218, 7791: 2454274, 7799: 2454572}
[2025-04-16 22:39:36] 2025-04-16 22:39:24,184 | INFO     | --------------------------------------------------
[2025-04-16 22:39:36] 2025-04-16 22:39:24,184 | INFO     | 
[2025-04-16 22:39:36] 2025-04-16 22:39:24,184 | INFO     | executing command: ls -lF /opt/boinc/instance_homes/boinc_31417/slots/12
[2025-04-16 22:39:36] 2025-04-16 22:39:24,195 | INFO     | 7816s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-04-16 22:39:36] 2025-04-16 22:39:24,205 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,205 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,205 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,205 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,206 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,207 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,207 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,207 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 22:39:36] 2025-04-16 22:39:24,207 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,207 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 22:39:36] 2025-04-16 22:39:24,207 | INFO     | job 6603900913 has completed (purged errors)
[2025-04-16 22:39:36] 2025-04-16 22:39:24,207 | INFO     | overall cleanup function is called
[2025-04-16 22:39:36] 2025-04-16 22:39:25,217 | INFO     | --- collectZombieJob: --- 10, [3751042]
[2025-04-16 22:39:36] 2025-04-16 22:39:25,217 | INFO     | zombie collector waiting for pid 3751042
[2025-04-16 22:39:36] 2025-04-16 22:39:25,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 22:39:36] 2025-04-16 22:39:25,218 | INFO     | collected zombie processes
[2025-04-16 22:39:36] 2025-04-16 22:39:25,218 | INFO     | will attempt to kill all subprocesses of pid=3751042
[2025-04-16 22:39:36] 2025-04-16 22:39:25,492 | INFO     | process IDs to be killed: [3751042] (in reverse order)
[2025-04-16 22:39:36] 2025-04-16 22:39:25,658 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 22:39:36] 2025-04-16 22:39:25,659 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 22:39:36] 2025-04-16 22:39:25,671 | INFO     | did not find any defunct processes belonging to 3751042
[2025-04-16 22:39:36] 2025-04-16 22:39:25,678 | INFO     | did not find any defunct processes belonging to 3751042
[2025-04-16 22:39:36] 2025-04-16 22:39:25,678 | INFO     | ready for new job
[2025-04-16 22:39:36] 2025-04-16 22:39:25,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 22:39:36] 2025-04-16 22:39:25,680 | INFO     | **************************************
[2025-04-16 22:39:36] 2025-04-16 22:39:25,680 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 22:39:36] 2025-04-16 22:39:25,680 | INFO     | **************************************
[2025-04-16 22:39:36] 2025-04-16 22:39:25,680 | INFO     | 
[2025-04-16 22:39:36] 2025-04-16 22:39:25,708 | INFO     | architecture information:
[2025-04-16 22:39:36] 2025-04-16 22:39:25,708 | INFO     | executing command: cat /etc/os-release
[2025-04-16 22:39:36] 2025-04-16 22:39:25,725 | INFO     | cat /etc/os-release:
[2025-04-16 22:39:36] NAME="CentOS Linux"
[2025-04-16 22:39:36] VERSION="7 (Core)"
[2025-04-16 22:39:36] ID="centos"
[2025-04-16 22:39:36] ID_LIKE="rhel fedora"
[2025-04-16 22:39:36] VERSION_ID="7"
[2025-04-16 22:39:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 22:39:36] ANSI_COLOR="0;31"
[2025-04-16 22:39:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 22:39:36] HOME_URL="https://www.centos.org/"
[2025-04-16 22:39:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 22:39:36] 
[2025-04-16 22:39:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 22:39:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 22:39:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 22:39:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 22:39:36] 
[2025-04-16 22:39:36] 2025-04-16 22:39:25,726 | INFO     | **************************************
[2025-04-16 22:39:36] 2025-04-16 22:39:26,229 | INFO     | executing command: df -mP /opt/boinc/instance_homes/boinc_31417/slots/12
[2025-04-16 22:39:36] 2025-04-16 22:39:26,247 | INFO     | sufficient remaining disk space (310050291712 B)
[2025-04-16 22:39:36] 2025-04-16 22:39:26,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 22:39:36] 2025-04-16 22:39:26,247 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 22:39:36] 2025-04-16 22:39:26,248 | INFO     | update_server=False
[2025-04-16 22:39:36] 2025-04-16 22:39:26,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 22:39:36] 2025-04-16 22:39:26,404 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 22:39:36] 2025-04-16 22:39:26,404 | INFO     | aborting loop
[2025-04-16 22:39:36] 2025-04-16 22:39:26,553 | INFO     | all job control threads have been joined
[2025-04-16 22:39:36] 2025-04-16 22:39:26,735 | INFO     | all payload control threads have been joined
[2025-04-16 22:39:36] 2025-04-16 22:39:26,779 | INFO     | all data control threads have been joined
[2025-04-16 22:39:36] 2025-04-16 22:39:26,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 22:39:36] 2025-04-16 22:39:27,253 | INFO     | [job] retrieve thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:27,279 | INFO     | [payload] validate_post thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:27,319 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:27,355 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:27,410 | INFO     | [job] job monitor thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:27,472 | INFO     | [payload] failed_post thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:27,542 | INFO     | PID=3733646 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-16 22:39:36] 2025-04-16 22:39:27,542 | INFO     | .. there are 18 such processes running
[2025-04-16 22:39:36] 2025-04-16 22:39:27,542 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 22:39:36] 2025-04-16 22:39:27,542 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 22:39:36] 2025-04-16 22:39:27,542 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 22:39:36] 2025-04-16 22:39:27,559 | INFO     | [job] control thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:27,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 22:39:36] 2025-04-16 22:39:27,621 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:27,739 | INFO     | [payload] control thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:27,783 | INFO     | [data] control thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:28,309 | INFO     | [data] copytool_in thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:28,515 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:28,651 | INFO     | [job] validate thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:28,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 22:39:36] 2025-04-16 22:39:29,571 | INFO     | [data] copytool_out thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:29,915 | INFO     | [job] queue monitor thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:30,843 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 22:39:36] 2025-04-16 22:39:31,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139856952756032)>', '<ExcThread(monitor, started 139856642549504)>']
[2025-04-16 22:39:36] 2025-04-16 22:39:31,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 22:39:36] 2025-04-16 22:39:31,560 | INFO     | [monitor] control thread has ended
[2025-04-16 22:39:36] 2025-04-16 22:39:36,087 | INFO     | all workflow threads have been joined
[2025-04-16 22:39:36] 2025-04-16 22:39:36,087 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 22:39:36] 2025-04-16 22:39:36,087 | INFO     | traces error code: 0
[2025-04-16 22:39:36] 2025-04-16 22:39:36,087 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 22:39:36] 2025-04-16 22:39:36,163 [wrapper] ==== pilot stdout END ====
[2025-04-16 22:39:36] 2025-04-16 22:39:36,166 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 22:39:36] 2025-04-16 22:39:36,170 [wrapper] pilotpid: 3733646
[2025-04-16 22:39:36] 2025-04-16 22:39:36,173 [wrapper] Pilot exit status: 0
[2025-04-16 22:39:36] 2025-04-16 22:39:36,185 [wrapper] pandaids: 6603900913
[2025-04-16 22:39:36] 2025-04-16 22:39:36,258 [wrapper] cleanup supervisor_pilot 3935659 3733648
[2025-04-16 22:39:36] 2025-04-16 22:39:36,262 [wrapper] Test setup, not cleaning
[2025-04-16 22:39:36] 2025-04-16 22:39:36,265 [wrapper] apfmon messages muted
[2025-04-16 22:39:36] 2025-04-16 22:39:36,269 [wrapper] ==== wrapper stdout END ====
[2025-04-16 22:39:36] 2025-04-16 22:39:36,273 [wrapper] ==== wrapper stderr END ====
[2025-04-16 22:39:36]  *** Error codes and diagnostics ***
[2025-04-16 22:39:36]     "exeErrorCode": 0,
[2025-04-16 22:39:36]     "exeErrorDiag": "",
[2025-04-16 22:39:36]     "pilotErrorCode": 0,
[2025-04-16 22:39:36]     "pilotErrorDiag": "",
[2025-04-16 22:39:36]  *** Listing of results directory ***
[2025-04-16 22:39:36] total 411280
[2025-04-16 22:39:36] -rw-r--r-- 1 boinc boinc    495897 Apr 16 10:49 pilot3.tar.gz
[2025-04-16 22:39:36] -rwx------ 1 boinc boinc     37140 Apr 16 11:03 runpilot2-wrapper.sh
[2025-04-16 22:39:36] -rw-r--r-- 1 boinc boinc      5111 Apr 16 11:03 queuedata.json
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc       100 Apr 16 20:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 22:39:36] -rwxr-xr-x 1 boinc boinc      7986 Apr 16 20:28 run_atlas
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc       105 Apr 16 20:28 job.xml
[2025-04-16 22:39:36] -rw-r--r-- 2 boinc boinc     17569 Apr 16 20:28 start_atlas.sh
[2025-04-16 22:39:36] drwxrwx--x 2 boinc boinc      4096 Apr 16 20:28 shared
[2025-04-16 22:39:36] -rw-r--r-- 2 boinc boinc    508895 Apr 16 20:28 input.tar.gz
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc      6942 Apr 16 20:28 init_data.xml
[2025-04-16 22:39:36] -rw-r--r-- 2 boinc boinc 224684640 Apr 16 20:28 EVNT.44075481._001557.pool.root.1
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc         0 Apr 16 20:28 boinc_lockfile
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc      2578 Apr 16 20:28 pandaJob.out
[2025-04-16 22:39:36] -rw------- 1 boinc boinc       424 Apr 16 20:28 setup.sh.local
[2025-04-16 22:39:36] -rw------- 1 boinc boinc    986560 Apr 16 20:29 agis_schedconf.cvmfs.json
[2025-04-16 22:39:36] -rw------- 1 boinc boinc   1603529 Apr 16 20:29 agis_ddmendpoints.agis.ALL.json
[2025-04-16 22:39:36] drwx------ 4 boinc boinc      4096 Apr 16 20:29 pilot3
[2025-04-16 22:39:36] -rw------- 1 boinc boinc        95 Apr 16 22:38 pilot_heartbeat.json
[2025-04-16 22:39:36] -rw------- 1 boinc boinc 190444901 Apr 16 22:38 HITS.44075483._039688.pool.root.1
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc       530 Apr 16 22:39 boinc_task_state.xml
[2025-04-16 22:39:36] -rw------- 1 boinc boinc      1028 Apr 16 22:39 memory_monitor_summary.json
[2025-04-16 22:39:36] -rw------- 1 boinc boinc    388709 Apr 16 22:39 log.44075483._039688.job.log.tgz.1
[2025-04-16 22:39:36] -rw------- 1 boinc boinc      7649 Apr 16 22:39 heartbeat.json
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc      8192 Apr 16 22:39 boinc_mmap_file
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc        27 Apr 16 22:39 wrapper_checkpoint.txt
[2025-04-16 22:39:36] -rw------- 1 boinc boinc      4773 Apr 16 22:39 pilotlog.txt
[2025-04-16 22:39:36] -rw------- 1 boinc boinc    701299 Apr 16 22:39 log.44075483._039688.job.log.1
[2025-04-16 22:39:36] -rw------- 1 boinc boinc       357 Apr 16 22:39 output.list
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc       620 Apr 16 22:39 runtime_log
[2025-04-16 22:39:36] -rw------- 1 boinc boinc   1105920 Apr 16 22:39 result.tar.gz
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc     11427 Apr 16 22:39 runtime_log.err
[2025-04-16 22:39:36] -rw------- 1 boinc boinc       651 Apr 16 22:39 2d2MDm1iFP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmGV2KDmKMw1Qo.diag
[2025-04-16 22:39:36] -rw-rw-r-- 1 boinc boinc     20702 Apr 16 22:39 stderr.txt
[2025-04-16 22:39:36] HITS file was successfully produced:
[2025-04-16 22:39:36] -rw------- 1 boinc boinc 190444901 Apr 16 22:38 shared/HITS.pool.root.1
[2025-04-16 22:39:36]  *** Contents of shared directory: ***
[2025-04-16 22:39:36] total 407012
[2025-04-16 22:39:36] -rw-r--r-- 2 boinc boinc     17569 Apr 16 20:28 start_atlas.sh
[2025-04-16 22:39:36] -rw-r--r-- 2 boinc boinc    508895 Apr 16 20:28 input.tar.gz
[2025-04-16 22:39:36] -rw-r--r-- 2 boinc boinc 224684640 Apr 16 20:28 ATLAS.root_0
[2025-04-16 22:39:36] -rw------- 1 boinc boinc 190444901 Apr 16 22:38 HITS.pool.root.1
[2025-04-16 22:39:36] -rw------- 1 boinc boinc   1105920 Apr 16 22:39 result.tar.gz
22:39:37 (3727339): run_atlas exited; CPU time 45045.599056
22:39:37 (3727339): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN