Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:04:10 (1393567): wrapper (7.7.26015): starting
07:04:10 (1393567): wrapper: running run_atlas (--nthreads 6)
[2025-04-17 07:04:10] Arguments: --nthreads 6
[2025-04-17 07:04:10] Threads: 6
[2025-04-17 07:04:10] Checking for CVMFS
[2025-04-17 07:04:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-17 07:04:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-17 07:04:10] Running cvmfs_config stat atlas.cern.ch
[2025-04-17 07:04:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-17 07:04:10] 2.11.5.0 3108580 7061 87272 144939 1 187 51512890 52428800 1814 130560 0 18429926 99.997 1561801 69 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-04-17 07:04:10] CVMFS is ok
[2025-04-17 07:04:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-17 07:04:10] Checking for apptainer binary...
[2025-04-17 07:04:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-17 07:04:10] Running /usr/bin/apptainer --version
[2025-04-17 07:04:10] apptainer version 1.3.5-1.el9
[2025-04-17 07:04:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-17 07:04:10] testio008
[2025-04-17 07:04:10] apptainer works
[2025-04-17 07:04:10] Set ATHENA_PROC_NUMBER=6
[2025-04-17 07:04:10] Set ATHENA_CORE_NUMBER=6
[2025-04-17 07:04:10] Starting ATLAS job with PandaID=6603899846
[2025-04-17 07:04:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 08:13:41]  *** The last 200 lines of the pilot log: ***
[2025-04-17 08:13:41]  filetype=log
[2025-04-17 08:13:41]  guid=c005d4d6-e398-43a0-a559-81fa5a757b34
[2025-04-17 08:13:41]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-17 08:13:41]  is_altstaged=None
[2025-04-17 08:13:41]  is_tar=False
[2025-04-17 08:13:41]  lfn=log.44075483._039140.job.log.tgz.1
[2025-04-17 08:13:41]  mtime=0
[2025-04-17 08:13:41]  protocol_id=None
[2025-04-17 08:13:41]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-17 08:13:41]  replicas=None
[2025-04-17 08:13:41]  scope=mc23_13p6TeV
[2025-04-17 08:13:41]  status=None
[2025-04-17 08:13:41]  status_code=0
[2025-04-17 08:13:41]  storage_token=
[2025-04-17 08:13:41]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6603899846/log.44075483._039140.job.log.tgz.1
[2025-04-17 08:13:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/87/log.44075483._039140.job.log.tgz.1
[2025-04-17 08:13:41]  workdir=None
[2025-04-17 08:13:41] ]
[2025-04-17 08:13:41] 2025-04-16 23:13:23,472 | INFO     | transferring file log.44075483._039140.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6603899846/log.44075483._039140.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-04-17 08:13:41] 2025-04-16 23:13:23,472 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6603899846/log.44075483._039140.job.log.tgz.1 /var/lib/boinc/slots/3/log.44075483._039140.job
[2025-04-17 08:13:41] 2025-04-16 23:13:23,480 | INFO     | adding to output.list: log.44075483._039140.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1f/87/log.44075483._039140.job.log.tg
[2025-04-17 08:13:41] 2025-04-16 23:13:23,481 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-17 08:13:41] 2025-04-16 23:13:23,481 | INFO     | summary of transferred files:
[2025-04-17 08:13:41] 2025-04-16 23:13:23,481 | INFO     |  -- lfn=log.44075483._039140.job.log.tgz.1, status_code=0, status=transferred
[2025-04-17 08:13:41] 2025-04-16 23:13:23,481 | INFO     | stage-out finished correctly
[2025-04-17 08:13:41] 2025-04-16 23:13:25,012 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-17 08:13:41] 2025-04-16 23:13:28,014 | INFO     | job 6603899846 has state=finished
[2025-04-17 08:13:41] 2025-04-16 23:13:28,014 | INFO     | preparing for final server update for job 6603899846 in state='finished'
[2025-04-17 08:13:41] 2025-04-16 23:13:28,014 | INFO     | this job has now completed (state=finished)
[2025-04-17 08:13:41] 2025-04-16 23:13:28,014 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-17 08:13:41] 2025-04-16 23:13:28,014 | INFO     | log transfer has been attempted: DONE
[2025-04-17 08:13:41] 2025-04-16 23:13:28,014 | INFO     | job 6603899846 has finished - writing final server update
[2025-04-17 08:13:41] 2025-04-16 23:13:28,015 | INFO     | total number of processed events: 400 (read)
[2025-04-17 08:13:41] 2025-04-16 23:13:28,016 | INFO     | executing command: lscpu
[2025-04-17 08:13:41] 2025-04-16 23:13:28,028 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-17 08:13:41] 2025-04-16 23:13:28,529 | WARNING  | process 1403916 can no longer be monitored (due to stat problems) - aborting
[2025-04-17 08:13:41] 2025-04-16 23:13:28,529 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6603899846/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 08:13:41] 2025-04-16 23:13:28,566 | INFO     | number of running child processes to parent process 1403916: 1
[2025-04-17 08:13:41] 2025-04-16 23:13:28,566 | INFO     | maximum number of monitored processes: 6
[2025-04-17 08:13:41] 2025-04-16 23:13:29,352 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-17 08:13:41] 2025-04-16 23:13:29,352 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6603899846/memory_monitor_summary.json (trf name=prmon)
[2025-04-17 08:13:41] 2025-04-16 23:13:29,352 | INFO     | extracted standard info from prmon json
[2025-04-17 08:13:41] 2025-04-16 23:13:29,352 | INFO     | extracted standard memory fields from prmon json
[2025-04-17 08:13:41] 2025-04-16 23:13:29,352 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-17 08:13:41] 2025-04-16 23:13:29,352 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-17 08:13:41] 2025-04-16 23:13:29,352 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-17 08:13:41] 2025-04-16 23:13:29,353 | INFO     | fitting pss+swap vs Time
[2025-04-17 08:13:41] 2025-04-16 23:13:29,353 | INFO     | sum of square deviations: 70364110.0
[2025-04-17 08:13:41] 2025-04-16 23:13:29,353 | INFO     | sum of deviations: 18172803837.0
[2025-04-17 08:13:41] 2025-04-16 23:13:29,353 | INFO     | mean x: 1744843208.0
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | mean y: 2254400.2459016396
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | -- intersect: -450635056940.8027
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | intersect: -450635056940.8027
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | chi2: 1.9647435391745953
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | -- intersect: -450635056940.8027
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | current memory leak: 258.27 B/s (using 61 data points, chi2=1.96)
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | ..............................
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | . Timing measurements:
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | . get job = 0 s
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | . initial setup = 4 s
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | . payload setup = 1 s
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | . stage-in = 0 s
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | . payload execution = 4127 s
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | . stage-out = 0 s
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | . log creation = 0 s
[2025-04-17 08:13:41] 2025-04-16 23:13:29,354 | INFO     | ..............................
[2025-04-17 08:13:41] 2025-04-16 23:13:29,390 | INFO     | 
[2025-04-17 08:13:41] 2025-04-16 23:13:29,390 | INFO     | job summary report
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | --------------------------------------------------
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | PanDA job id: 6603899846
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | task id: 44075483
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | errors: (none)
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | pilot state: finished 
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | transexitcode: 0
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | exeerrorcode: 0
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | exeerrordiag: 
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | exitcode: 0
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | exitmsg: OK
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | cpuconsumptiontime: 19142 s
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | nevents: 400
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | neventsw: 0
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | pid: 1403916
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | pgrp: 1403916
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | corecount: 6
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | event service: False
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | sizes: {0: 2417365, 1: 2417571, 10: 2417599, 4132: 2443404, 4133: 2452345, 4135: 2452401, 4139: 2452699}
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | --------------------------------------------------
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | 
[2025-04-17 08:13:41] 2025-04-16 23:13:29,391 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-04-17 08:13:41] 2025-04-16 23:13:29,399 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,399 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,399 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,399 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,399 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,399 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | job 6603899846 has completed (purged errors)
[2025-04-17 08:13:41] 2025-04-16 23:13:29,400 | INFO     | overall cleanup function is called
[2025-04-17 08:13:41] 2025-04-16 23:13:30,406 | INFO     | --- collectZombieJob: --- 10, [1403916]
[2025-04-17 08:13:41] 2025-04-16 23:13:30,406 | INFO     | zombie collector waiting for pid 1403916
[2025-04-17 08:13:41] 2025-04-16 23:13:30,406 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 08:13:41] 2025-04-16 23:13:30,407 | INFO     | collected zombie processes
[2025-04-17 08:13:41] 2025-04-16 23:13:30,407 | INFO     | will attempt to kill all subprocesses of pid=1403916
[2025-04-17 08:13:41] 2025-04-16 23:13:30,458 | INFO     | process IDs to be killed: [1403916] (in reverse order)
[2025-04-17 08:13:41] 2025-04-16 23:13:30,479 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 08:13:41] 2025-04-16 23:13:30,479 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 08:13:41] 2025-04-16 23:13:30,481 | INFO     | did not find any defunct processes belonging to 1403916
[2025-04-17 08:13:41] 2025-04-16 23:13:30,483 | INFO     | did not find any defunct processes belonging to 1403916
[2025-04-17 08:13:41] 2025-04-16 23:13:30,484 | INFO     | ready for new job
[2025-04-17 08:13:41] 2025-04-16 23:13:30,484 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 08:13:41] 2025-04-16 23:13:30,484 | INFO     | **************************************
[2025-04-17 08:13:41] 2025-04-16 23:13:30,484 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 08:13:41] 2025-04-16 23:13:30,484 | INFO     | **************************************
[2025-04-17 08:13:41] 2025-04-16 23:13:30,484 | INFO     | 
[2025-04-17 08:13:41] 2025-04-16 23:13:30,485 | INFO     | architecture information:
[2025-04-17 08:13:41] 2025-04-16 23:13:30,485 | INFO     | executing command: cat /etc/os-release
[2025-04-17 08:13:41] 2025-04-16 23:13:30,490 | INFO     | cat /etc/os-release:
[2025-04-17 08:13:41] NAME="CentOS Linux"
[2025-04-17 08:13:41] VERSION="7 (Core)"
[2025-04-17 08:13:41] ID="centos"
[2025-04-17 08:13:41] ID_LIKE="rhel fedora"
[2025-04-17 08:13:41] VERSION_ID="7"
[2025-04-17 08:13:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 08:13:41] ANSI_COLOR="0;31"
[2025-04-17 08:13:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 08:13:41] HOME_URL="https://www.centos.org/"
[2025-04-17 08:13:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 08:13:41] 
[2025-04-17 08:13:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 08:13:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 08:13:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 08:13:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 08:13:41] 
[2025-04-17 08:13:41] 2025-04-16 23:13:30,490 | INFO     | **************************************
[2025-04-17 08:13:41] 2025-04-16 23:13:30,992 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-04-17 08:13:41] 2025-04-16 23:13:30,999 | INFO     | sufficient remaining disk space (264037728256 B)
[2025-04-17 08:13:41] 2025-04-16 23:13:30,999 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 08:13:41] 2025-04-16 23:13:30,999 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 08:13:41] 2025-04-16 23:13:30,999 | INFO     | update_server=False
[2025-04-17 08:13:41] 2025-04-16 23:13:31,000 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 08:13:41] 2025-04-16 23:13:31,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 08:13:41] 2025-04-16 23:13:31,052 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 08:13:41] 2025-04-16 23:13:31,069 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-17 08:13:41] 2025-04-16 23:13:31,069 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-17 08:13:41] 2025-04-16 23:13:31,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 08:13:41] 2025-04-16 23:13:31,069 | INFO     | will abort loop
[2025-04-17 08:13:41] 2025-04-16 23:13:31,164 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 08:13:41] 2025-04-16 23:13:31,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 08:13:41] 2025-04-16 23:13:31,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 08:13:41] 2025-04-16 23:13:31,280 | INFO     | all payload control threads have been joined
[2025-04-17 08:13:41] 2025-04-16 23:13:31,534 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 08:13:41] 2025-04-16 23:13:31,964 | INFO     | all job control threads have been joined
[2025-04-17 08:13:41] 2025-04-16 23:13:32,002 | INFO     | [job] retrieve thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:32,004 | INFO     | [job] queue monitor thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:32,063 | INFO     | all data control threads have been joined
[2025-04-17 08:13:41] 2025-04-16 23:13:32,075 | INFO     | [job] job monitor thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:32,286 | INFO     | [payload] control thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:32,329 | INFO     | [payload] failed_post thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:32,823 | INFO     | [job] validate thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:32,950 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:32,951 | INFO     | [data] copytool_in thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:32,969 | INFO     | [job] control thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:33,006 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:33,035 | INFO     | [payload] validate_post thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:33,069 | INFO     | [data] control thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:33,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:33,417 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:33,539 | INFO     | [data] copytool_out thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:35,057 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 08:13:41] 2025-04-16 23:13:36,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520988739392)>', '<ExcThread(monitor, started 140520483432192)>']
[2025-04-17 08:13:41] 2025-04-16 23:13:37,188 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 08:13:41] 2025-04-16 23:13:37,188 | INFO     | [monitor] control thread has ended
[2025-04-17 08:13:41] 2025-04-16 23:13:41,844 | INFO     | all workflow threads have been joined
[2025-04-17 08:13:41] 2025-04-16 23:13:41,844 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 08:13:41] 2025-04-16 23:13:41,844 | INFO     | traces error code: 0
[2025-04-17 08:13:41] 2025-04-16 23:13:41,845 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 08:13:41] 2025-04-16 23:13:41,896 [wrapper] ==== pilot stdout END ====
[2025-04-17 08:13:41] 2025-04-16 23:13:41,897 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 08:13:41] 2025-04-16 23:13:41,898 [wrapper] pilotpid: 1397299
[2025-04-17 08:13:41] 2025-04-16 23:13:41,899 [wrapper] Pilot exit status: 0
[2025-04-17 08:13:41] 2025-04-16 23:13:41,902 [wrapper] pandaids: 6603899846
[2025-04-17 08:13:41] 2025-04-16 23:13:41,915 [wrapper] cleanup supervisor_pilot 1441884 1397300
[2025-04-17 08:13:41] 2025-04-16 23:13:41,916 [wrapper] Test setup, not cleaning
[2025-04-17 08:13:41] 2025-04-16 23:13:41,917 [wrapper] apfmon messages muted
[2025-04-17 08:13:41] 2025-04-16 23:13:41,918 [wrapper] ==== wrapper stdout END ====
[2025-04-17 08:13:41] 2025-04-16 23:13:41,919 [wrapper] ==== wrapper stderr END ====
[2025-04-17 08:13:41]  *** Error codes and diagnostics ***
[2025-04-17 08:13:41]     "exeErrorCode": 0,
[2025-04-17 08:13:41]     "exeErrorDiag": "",
[2025-04-17 08:13:41]     "pilotErrorCode": 0,
[2025-04-17 08:13:41]     "pilotErrorDiag": "",
[2025-04-17 08:13:41]  *** Listing of results directory ***
[2025-04-17 08:13:41] total 407828
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc    495897 Apr 16 19:02 pilot3.tar.gz
[2025-04-17 08:13:41] -rwx------. 1 boinc boinc     37140 Apr 16 19:06 runpilot2-wrapper.sh
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc      5111 Apr 16 19:06 queuedata.json
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc       100 Apr 17 07:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 08:13:41] -rwxr-xr-x. 1 boinc boinc      7986 Apr 17 07:04 run_atlas
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc       105 Apr 17 07:04 job.xml
[2025-04-17 08:13:41] drwxrwx--x. 2 boinc boinc        68 Apr 17 07:04 shared
[2025-04-17 08:13:41] -rw-r--r--. 2 boinc boinc    508887 Apr 17 07:04 input.tar.gz
[2025-04-17 08:13:41] -rw-r--r--. 2 boinc boinc 223984789 Apr 17 07:04 EVNT.44075481._001535.pool.root.1
[2025-04-17 08:13:41] -rw-r--r--. 2 boinc boinc     17569 Apr 17 07:04 start_atlas.sh
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc         0 Apr 17 07:04 boinc_lockfile
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc      2578 Apr 17 07:04 pandaJob.out
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc       424 Apr 17 07:04 setup.sh.local
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc    986560 Apr 17 07:04 agis_schedconf.cvmfs.json
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc   1603529 Apr 17 07:04 agis_ddmendpoints.agis.ALL.json
[2025-04-17 08:13:41] drwx------. 4 boinc boinc      4096 Apr 17 07:04 pilot3
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc      9515 Apr 17 07:24 init_data.xml
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc        95 Apr 17 08:12 pilot_heartbeat.json
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc 188441178 Apr 17 08:13 HITS.44075483._039140.pool.root.1
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc      8192 Apr 17 08:13 boinc_mmap_file
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc        27 Apr 17 08:13 wrapper_checkpoint.txt
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc       529 Apr 17 08:13 boinc_task_state.xml
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc      1021 Apr 17 08:13 memory_monitor_summary.json
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc    265239 Apr 17 08:13 log.44075483._039140.job.log.tgz.1
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc      7669 Apr 17 08:13 heartbeat.json
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc      4540 Apr 17 08:13 pilotlog.txt
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc    416010 Apr 17 08:13 log.44075483._039140.job.log.1
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc       357 Apr 17 08:13 output.list
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc       620 Apr 17 08:13 runtime_log
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc    696320 Apr 17 08:13 result.tar.gz
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc     10971 Apr 17 08:13 runtime_log.err
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc       641 Apr 17 08:13 5KhNDm6pEP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmU6ZLDm9Vbgcm.diag
[2025-04-17 08:13:41] -rw-r--r--. 1 boinc boinc     20885 Apr 17 08:13 stderr.txt
[2025-04-17 08:13:41] HITS file was successfully produced:
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc 188441178 Apr 17 08:13 shared/HITS.pool.root.1
[2025-04-17 08:13:41]  *** Contents of shared directory: ***
[2025-04-17 08:13:41] total 403964
[2025-04-17 08:13:41] -rw-r--r--. 2 boinc boinc    508887 Apr 17 07:04 input.tar.gz
[2025-04-17 08:13:41] -rw-r--r--. 2 boinc boinc 223984789 Apr 17 07:04 ATLAS.root_0
[2025-04-17 08:13:41] -rw-r--r--. 2 boinc boinc     17569 Apr 17 07:04 start_atlas.sh
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc 188441178 Apr 17 08:13 HITS.pool.root.1
[2025-04-17 08:13:41] -rw-------. 1 boinc boinc    696320 Apr 17 08:13 result.tar.gz
08:13:43 (1393567): run_atlas exited; CPU time 19167.480043
08:13:43 (1393567): called boinc_finish(0)

</stderr_txt>
]]>

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