Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
21:36:14 (81880): wrapper (7.7.26015): starting
21:36:14 (81880): wrapper: running run_atlas (--nthreads 4)
[2025-04-16 21:36:14] Arguments: --nthreads 4
[2025-04-16 21:36:14] Threads: 4
[2025-04-16 21:36:14] Checking for CVMFS
[2025-04-16 21:36:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 21:36:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 21:36:14] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 21:36:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 21:36:14] 2.9.2.0 3212 237 64008 144936 3 56 14967888 36864001 0 130560 0 193382 99.980 143259 26657 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-04-16 21:36:14] CVMFS is ok
[2025-04-16 21:36:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 21:36:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 21:36:14] Further information can be found at the LHC@home message board.
[2025-04-16 21:36:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 21:36:14] Checking for apptainer binary...
[2025-04-16 21:36:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 21:36:14] Running /usr/bin/apptainer --version
[2025-04-16 21:36:14] apptainer version 1.3.6-6.1
[2025-04-16 21:36:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 21:36:14] thA352
[2025-04-16 21:36:14] apptainer works
[2025-04-16 21:36:14] Set ATHENA_PROC_NUMBER=4
[2025-04-16 21:36:14] Set ATHENA_CORE_NUMBER=4
[2025-04-16 21:36:15] Starting ATLAS job with PandaID=6604035939
[2025-04-16 21:36:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 22:56:06]  *** The last 200 lines of the pilot log: ***
[2025-04-16 22:56:06]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-04-16 22:56:06]  is_altstaged=None
[2025-04-16 22:56:06]  is_tar=False
[2025-04-16 22:56:06]  lfn=log.44075483._041344.job.log.tgz.1
[2025-04-16 22:56:06]  mtime=0
[2025-04-16 22:56:06]  protocol_id=None
[2025-04-16 22:56:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 22:56:06]  replicas=None
[2025-04-16 22:56:06]  scope=mc23_13p6TeV
[2025-04-16 22:56:06]  status=None
[2025-04-16 22:56:06]  status_code=0
[2025-04-16 22:56:06]  storage_token=
[2025-04-16 22:56:06]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6604035939/log.44075483._041344.job.log.tgz.1
[2025-04-16 22:56:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/72/log.44075483._041344.job.log.tgz.1
[2025-04-16 22:56:06]  workdir=None
[2025-04-16 22:56:06] ]
[2025-04-16 22:56:06] 2025-04-16 20:55:44,626 | INFO     | transferring file log.44075483._041344.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6604035939/log.44075483._041344.job.log.tgz.1 to /local/data/boinc/
[2025-04-16 22:56:06] 2025-04-16 20:55:44,626 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6604035939/log.44075483._041344.job.log.tgz.1 /local/data/boinc/slots/0/log.44075483._0413
[2025-04-16 22:56:06] 2025-04-16 20:55:44,646 | INFO     | adding to output.list: log.44075483._041344.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/72/log.44075483._041344.job.log.tg
[2025-04-16 22:56:06] 2025-04-16 20:55:44,647 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 22:56:06] 2025-04-16 20:55:44,647 | INFO     | summary of transferred files:
[2025-04-16 22:56:06] 2025-04-16 20:55:44,647 | INFO     |  -- lfn=log.44075483._041344.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 22:56:06] 2025-04-16 20:55:44,647 | INFO     | stage-out finished correctly
[2025-04-16 22:56:06] 2025-04-16 20:55:44,687 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 22:56:06] 2025-04-16 20:55:44,776 | INFO     | monitor loop #366: job 0:6604035939 is in state 'finished'
[2025-04-16 22:56:06] 2025-04-16 20:55:44,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 22:56:06] 2025-04-16 20:55:47,280 | INFO     | monitor loop #367: job 0:6604035939 is in state 'finished'
[2025-04-16 22:56:06] 2025-04-16 20:55:47,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 22:56:06] 2025-04-16 20:55:47,597 | INFO     | job 6604035939 has state=finished
[2025-04-16 22:56:06] 2025-04-16 20:55:47,597 | INFO     | preparing for final server update for job 6604035939 in state='finished'
[2025-04-16 22:56:06] 2025-04-16 20:55:47,598 | INFO     | this job has now completed (state=finished)
[2025-04-16 22:56:06] 2025-04-16 20:55:47,598 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 22:56:06] 2025-04-16 20:55:47,598 | INFO     | log transfer has been attempted: DONE
[2025-04-16 22:56:06] 2025-04-16 20:55:47,598 | INFO     | job 6604035939 has finished - writing final server update
[2025-04-16 22:56:06] 2025-04-16 20:55:47,598 | INFO     | total number of processed events: 400 (read)
[2025-04-16 22:56:06] 2025-04-16 20:55:47,599 | INFO     | executing command: lscpu
[2025-04-16 22:56:06] 2025-04-16 20:55:47,622 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 22:56:06] 2025-04-16 20:55:49,784 | INFO     | monitor loop #368: job 0:6604035939 is in state 'finished'
[2025-04-16 22:56:06] 2025-04-16 20:55:49,784 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 22:56:06] 2025-04-16 20:55:52,287 | INFO     | monitor loop #369: job 0:6604035939 is in state 'finished'
[2025-04-16 22:56:06] 2025-04-16 20:55:52,287 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 22:56:06] 2025-04-16 20:55:52,450 | INFO     | CPU arch script returned: x86-64-v3
[2025-04-16 22:56:06] 2025-04-16 20:55:52,450 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6604035939/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 22:56:06] 2025-04-16 20:55:52,451 | INFO     | extracted standard info from prmon json
[2025-04-16 22:56:06] 2025-04-16 20:55:52,451 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 22:56:06] 2025-04-16 20:55:52,451 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 22:56:06] 2025-04-16 20:55:52,451 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 22:56:06] 2025-04-16 20:55:52,451 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 22:56:06] 2025-04-16 20:55:52,452 | INFO     | fitting pss+swap vs Time
[2025-04-16 22:56:06] 2025-04-16 20:55:52,452 | INFO     | sum of square deviations: 110960220.0
[2025-04-16 22:56:06] 2025-04-16 20:55:52,452 | INFO     | sum of deviations: 2916712926.000001
[2025-04-16 22:56:06] 2025-04-16 20:55:52,452 | INFO     | mean x: 1744834646.0
[2025-04-16 22:56:06] 2025-04-16 20:55:52,452 | INFO     | mean y: 2438463.943661972
[2025-04-16 22:56:06] 2025-04-16 20:55:52,452 | INFO     | -- intersect: -45862482908.06547
[2025-04-16 22:56:06] 2025-04-16 20:55:52,452 | INFO     | intersect: -45862482908.06547
[2025-04-16 22:56:06] 2025-04-16 20:55:52,452 | INFO     | chi2: 1.086578714707743
[2025-04-16 22:56:06] 2025-04-16 20:55:52,452 | INFO     | -- intersect: -45862482908.06547
[2025-04-16 22:56:06] 2025-04-16 20:55:52,452 | INFO     | current memory leak: 26.29 B/s (using 71 data points, chi2=1.09)
[2025-04-16 22:56:06] 2025-04-16 20:55:52,453 | INFO     | ..............................
[2025-04-16 22:56:06] 2025-04-16 20:55:52,453 | INFO     | . Timing measurements:
[2025-04-16 22:56:06] 2025-04-16 20:55:52,453 | INFO     | . get job = 0 s
[2025-04-16 22:56:06] 2025-04-16 20:55:52,453 | INFO     | . initial setup = 1 s
[2025-04-16 22:56:06] 2025-04-16 20:55:52,453 | INFO     | . payload setup = 4 s
[2025-04-16 22:56:06] 2025-04-16 20:55:52,453 | INFO     | . stage-in = 0 s
[2025-04-16 22:56:06] 2025-04-16 20:55:52,453 | INFO     | . payload execution = 4738 s
[2025-04-16 22:56:06] 2025-04-16 20:55:52,453 | INFO     | . stage-out = 0 s
[2025-04-16 22:56:06] 2025-04-16 20:55:52,453 | INFO     | . log creation = 0 s
[2025-04-16 22:56:06] 2025-04-16 20:55:52,453 | INFO     | ..............................
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | 
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | job summary report
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | --------------------------------------------------
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | PanDA job id: 6604035939
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | task id: 44075483
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | errors: (none)
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | pilot state: finished 
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | transexitcode: 0
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | exeerrorcode: 0
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | exeerrordiag: 
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | exitcode: 0
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | exitmsg: OK
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | cpuconsumptiontime: 16275 s
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | nevents: 400
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | neventsw: 0
[2025-04-16 22:56:06] 2025-04-16 20:55:52,562 | INFO     | pid: 92160
[2025-04-16 22:56:06] 2025-04-16 20:55:52,563 | INFO     | pgrp: 92160
[2025-04-16 22:56:06] 2025-04-16 20:55:52,563 | INFO     | corecount: 4
[2025-04-16 22:56:06] 2025-04-16 20:55:52,563 | INFO     | event service: False
[2025-04-16 22:56:06] 2025-04-16 20:55:52,563 | INFO     | sizes: {0: 2417368, 4: 2417574, 11: 2417602, 4746: 2443833, 4747: 2452836, 4755: 2452950}
[2025-04-16 22:56:06] 2025-04-16 20:55:52,563 | INFO     | --------------------------------------------------
[2025-04-16 22:56:06] 2025-04-16 20:55:52,563 | INFO     | 
[2025-04-16 22:56:06] 2025-04-16 20:55:52,563 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-04-16 22:56:06] 2025-04-16 20:55:52,584 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,584 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,584 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,584 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,584 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,584 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | job 6604035939 has completed (purged errors)
[2025-04-16 22:56:06] 2025-04-16 20:55:52,585 | INFO     | overall cleanup function is called
[2025-04-16 22:56:06] 2025-04-16 20:55:53,592 | INFO     | --- collectZombieJob: --- 10, [92160]
[2025-04-16 22:56:06] 2025-04-16 20:55:53,592 | INFO     | zombie collector waiting for pid 92160
[2025-04-16 22:56:06] 2025-04-16 20:55:53,592 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 22:56:06] 2025-04-16 20:55:53,592 | INFO     | collected zombie processes
[2025-04-16 22:56:06] 2025-04-16 20:55:53,592 | INFO     | will attempt to kill all subprocesses of pid=92160
[2025-04-16 22:56:06] 2025-04-16 20:55:53,638 | INFO     | process IDs to be killed: [92160] (in reverse order)
[2025-04-16 22:56:06] 2025-04-16 20:55:53,672 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 22:56:06] 2025-04-16 20:55:53,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 22:56:06] 2025-04-16 20:55:53,674 | INFO     | did not find any defunct processes belonging to 92160
[2025-04-16 22:56:06] 2025-04-16 20:55:53,675 | INFO     | did not find any defunct processes belonging to 92160
[2025-04-16 22:56:06] 2025-04-16 20:55:53,676 | INFO     | ready for new job
[2025-04-16 22:56:06] 2025-04-16 20:55:53,676 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 22:56:06] 2025-04-16 20:55:53,676 | INFO     | **************************************
[2025-04-16 22:56:06] 2025-04-16 20:55:53,676 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 22:56:06] 2025-04-16 20:55:53,676 | INFO     | **************************************
[2025-04-16 22:56:06] 2025-04-16 20:55:53,676 | INFO     | 
[2025-04-16 22:56:06] 2025-04-16 20:55:53,677 | INFO     | architecture information:
[2025-04-16 22:56:06] 2025-04-16 20:55:53,677 | INFO     | executing command: cat /etc/os-release
[2025-04-16 22:56:06] 2025-04-16 20:55:53,691 | INFO     | cat /etc/os-release:
[2025-04-16 22:56:06] NAME="CentOS Linux"
[2025-04-16 22:56:06] VERSION="7 (Core)"
[2025-04-16 22:56:06] ID="centos"
[2025-04-16 22:56:06] ID_LIKE="rhel fedora"
[2025-04-16 22:56:06] VERSION_ID="7"
[2025-04-16 22:56:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 22:56:06] ANSI_COLOR="0;31"
[2025-04-16 22:56:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 22:56:06] HOME_URL="https://www.centos.org/"
[2025-04-16 22:56:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 22:56:06] 
[2025-04-16 22:56:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 22:56:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 22:56:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 22:56:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 22:56:06] 
[2025-04-16 22:56:06] 2025-04-16 20:55:53,691 | INFO     | **************************************
[2025-04-16 22:56:06] 2025-04-16 20:55:54,195 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-04-16 22:56:06] 2025-04-16 20:55:54,213 | INFO     | sufficient remaining disk space (241609736192 B)
[2025-04-16 22:56:06] 2025-04-16 20:55:54,214 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 22:56:06] 2025-04-16 20:55:54,214 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 22:56:06] 2025-04-16 20:55:54,214 | INFO     | update_server=False
[2025-04-16 22:56:06] 2025-04-16 20:55:54,214 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 22:56:06] 2025-04-16 20:55:54,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 22:56:06] 2025-04-16 20:55:54,214 | INFO     | aborting loop
[2025-04-16 22:56:06] 2025-04-16 20:55:54,214 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 22:56:06] 2025-04-16 20:55:54,247 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 22:56:06] 2025-04-16 20:55:54,247 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 22:56:06] 2025-04-16 20:55:54,247 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 22:56:06] 2025-04-16 20:55:54,405 | INFO     | all data control threads have been joined
[2025-04-16 22:56:06] 2025-04-16 20:55:54,821 | INFO     | all payload control threads have been joined
[2025-04-16 22:56:06] 2025-04-16 20:55:55,203 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 22:56:06] 2025-04-16 20:55:55,220 | INFO     | [job] retrieve thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:55,220 | INFO     | [job] job monitor thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:55,220 | INFO     | [job] queue monitor thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:55,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 22:56:06] 2025-04-16 20:55:55,266 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:55,408 | INFO     | all job control threads have been joined
[2025-04-16 22:56:06] 2025-04-16 20:55:55,410 | INFO     | [data] control thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:55,614 | INFO     | [payload] validate_post thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:55,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:55,827 | INFO     | [payload] control thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:55,882 | INFO     | [data] copytool_in thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:56,343 | INFO     | [payload] failed_post thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:56,375 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:56,414 | INFO     | [job] control thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:56,615 | INFO     | [job] validate thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:56,714 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:57,210 | INFO     | [data] copytool_out thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:55:59,244 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 22:56:06] 2025-04-16 20:56:01,171 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139983803897664)>', '<ExcThread(monitor, started 139983042111232)>']
[2025-04-16 22:56:06] 2025-04-16 20:56:01,285 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 22:56:06] 2025-04-16 20:56:01,285 | INFO     | [monitor] control thread has ended
[2025-04-16 22:56:06] 2025-04-16 20:56:06,196 | INFO     | all workflow threads have been joined
[2025-04-16 22:56:06] 2025-04-16 20:56:06,197 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 22:56:06] 2025-04-16 20:56:06,197 | INFO     | traces error code: 0
[2025-04-16 22:56:06] 2025-04-16 20:56:06,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 22:56:06] 2025-04-16 20:56:06,274 [wrapper] ==== pilot stdout END ====
[2025-04-16 22:56:06] 2025-04-16 20:56:06,278 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 22:56:06] 2025-04-16 20:56:06,283 [wrapper] pilotpid: 85592
[2025-04-16 22:56:06] 2025-04-16 20:56:06,287 [wrapper] Pilot exit status: 0
[2025-04-16 22:56:06] 2025-04-16 20:56:06,300 [wrapper] pandaids: 6604035939
[2025-04-16 22:56:06] 2025-04-16 20:56:06,323 [wrapper] cleanup supervisor_pilot  104632 85593
[2025-04-16 22:56:06] 2025-04-16 20:56:06,327 [wrapper] Test setup, not cleaning
[2025-04-16 22:56:06] 2025-04-16 20:56:06,331 [wrapper] apfmon messages muted
[2025-04-16 22:56:06] 2025-04-16 20:56:06,335 [wrapper] ==== wrapper stdout END ====
[2025-04-16 22:56:06] 2025-04-16 20:56:06,339 [wrapper] ==== wrapper stderr END ====
[2025-04-16 22:56:06]  *** Error codes and diagnostics ***
[2025-04-16 22:56:06]     "exeErrorCode": 0,
[2025-04-16 22:56:06]     "exeErrorDiag": "",
[2025-04-16 22:56:06]     "pilotErrorCode": 0,
[2025-04-16 22:56:06]     "pilotErrorDiag": "",
[2025-04-16 22:56:06]  *** Listing of results directory ***
[2025-04-16 22:56:06] total 415656
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc    495897 Apr 16 16:04 pilot3.tar.gz
[2025-04-16 22:56:06] -rwx------ 1 boinc boinc     37140 Apr 16 16:11 runpilot2-wrapper.sh
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc      5111 Apr 16 16:11 queuedata.json
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc       100 Apr 16 21:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 22:56:06] -rwxr-xr-x 1 boinc boinc      7986 Apr 16 21:36 run_atlas
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc       105 Apr 16 21:36 job.xml
[2025-04-16 22:56:06] -rw-r--r-- 2 boinc boinc 224307698 Apr 16 21:36 EVNT.44075481._001620.pool.root.1
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc      6853 Apr 16 21:36 init_data.xml
[2025-04-16 22:56:06] drwxrwx--x 2 boinc boinc      4096 Apr 16 21:36 shared
[2025-04-16 22:56:06] -rw-r--r-- 2 boinc boinc    508890 Apr 16 21:36 input.tar.gz
[2025-04-16 22:56:06] -rw-r--r-- 2 boinc boinc     17569 Apr 16 21:36 start_atlas.sh
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc         0 Apr 16 21:36 boinc_lockfile
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc      2578 Apr 16 21:36 pandaJob.out
[2025-04-16 22:56:06] -rw------- 1 boinc boinc       424 Apr 16 21:36 setup.sh.local
[2025-04-16 22:56:06] -rw------- 1 boinc boinc    986568 Apr 16 21:36 agis_schedconf.cvmfs.json
[2025-04-16 22:56:06] -rw------- 1 boinc boinc   1603529 Apr 16 21:36 agis_ddmendpoints.agis.ALL.json
[2025-04-16 22:56:06] drwx------ 4 boinc boinc      4096 Apr 16 21:36 pilot3
[2025-04-16 22:56:06] -rw------- 1 boinc boinc 196084361 Apr 16 22:55 HITS.44075483._041344.pool.root.1
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc       529 Apr 16 22:55 boinc_task_state.xml
[2025-04-16 22:56:06] -rw------- 1 boinc boinc      1023 Apr 16 22:55 memory_monitor_summary.json
[2025-04-16 22:56:06] -rw------- 1 boinc boinc    232815 Apr 16 22:55 log.44075483._041344.job.log.tgz.1
[2025-04-16 22:56:06] -rw------- 1 boinc boinc        95 Apr 16 22:55 pilot_heartbeat.json
[2025-04-16 22:56:06] -rw------- 1 boinc boinc      7664 Apr 16 22:55 heartbeat.json
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc      8192 Apr 16 22:55 boinc_mmap_file
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc        27 Apr 16 22:55 wrapper_checkpoint.txt
[2025-04-16 22:56:06] -rw------- 1 boinc boinc      4357 Apr 16 22:56 pilotlog.txt
[2025-04-16 22:56:06] -rw------- 1 boinc boinc    464452 Apr 16 22:56 log.44075483._041344.job.log.1
[2025-04-16 22:56:06] -rw------- 1 boinc boinc       357 Apr 16 22:56 output.list
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc       620 Apr 16 22:56 runtime_log
[2025-04-16 22:56:06] -rw------- 1 boinc boinc    716800 Apr 16 22:56 result.tar.gz
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc     11099 Apr 16 22:56 runtime_log.err
[2025-04-16 22:56:06] -rw------- 1 boinc boinc       658 Apr 16 22:56 bfxKDmifIP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmuSaLDmZo2QNo.diag
[2025-04-16 22:56:06] -rw-r--r-- 1 boinc boinc     21319 Apr 16 22:56 stderr.txt
[2025-04-16 22:56:06] HITS file was successfully produced:
[2025-04-16 22:56:06] -rw------- 1 boinc boinc 196084361 Apr 16 22:55 shared/HITS.pool.root.1
[2025-04-16 22:56:06]  *** Contents of shared directory: ***
[2025-04-16 22:56:06] total 411772
[2025-04-16 22:56:06] -rw-r--r-- 2 boinc boinc 224307698 Apr 16 21:36 ATLAS.root_0
[2025-04-16 22:56:06] -rw-r--r-- 2 boinc boinc    508890 Apr 16 21:36 input.tar.gz
[2025-04-16 22:56:06] -rw-r--r-- 2 boinc boinc     17569 Apr 16 21:36 start_atlas.sh
[2025-04-16 22:56:06] -rw------- 1 boinc boinc 196084361 Apr 16 22:55 HITS.pool.root.1
[2025-04-16 22:56:06] -rw------- 1 boinc boinc    716800 Apr 16 22:56 result.tar.gz
22:56:08 (81880): run_atlas exited; CPU time 16292.212304
22:56:08 (81880): called boinc_finish(0)

</stderr_txt>
]]>

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