Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:42:03 (10857): wrapper (7.7.26015): starting
12:42:03 (10857): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 12:42:03] Arguments: --nthreads 12
[2025-04-16 12:42:03] Threads: 12
[2025-04-16 12:42:03] Checking for CVMFS
[2025-04-16 12:42:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 12:42:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 12:42:03] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 12:42:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 12:42:04] 2.11.2.0 30600 46713 99048 144932 1 351 17444850 18432001 4506 130560 0 89201197 98.768 245039186 30635 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-16 12:42:04] CVMFS is ok
[2025-04-16 12:42:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 12:42:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 12:42:04] Further information can be found at the LHC@home message board.
[2025-04-16 12:42:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 12:42:04] Checking for apptainer binary...
[2025-04-16 12:42:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 12:42:04] Running /usr/bin/apptainer --version
[2025-04-16 12:42:08] apptainer version 1.3.2-1.el7
[2025-04-16 12:42:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 12:42:12] c-206-8.aglt2.org
[2025-04-16 12:42:12] apptainer works
[2025-04-16 12:42:12] Set ATHENA_PROC_NUMBER=12
[2025-04-16 12:42:12] Set ATHENA_CORE_NUMBER=12
[2025-04-16 12:42:13] Starting ATLAS job with PandaID=6603969979
[2025-04-16 12:42:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 14:48:50]  *** The last 200 lines of the pilot log: ***
[2025-04-17 14:48:50] 2025-04-17 18:48:18,499 | INFO     | sum of deviations: 1686964683013.5059
[2025-04-17 14:48:50] 2025-04-17 18:48:18,499 | INFO     | mean x: 1744868699.6595192
[2025-04-17 14:48:50] 2025-04-17 18:48:18,500 | INFO     | mean y: 2631643.6517218975
[2025-04-17 14:48:50] 2025-04-17 18:48:18,500 | INFO     | -- intersect: -2601559557.488492
[2025-04-17 14:48:50] 2025-04-17 18:48:18,500 | INFO     | intersect: -2601559557.488492
[2025-04-17 14:48:50] 2025-04-17 18:48:18,502 | INFO     | chi2: 7.633855049874681
[2025-04-17 14:48:50] 2025-04-17 18:48:18,505 | INFO     | sum of square deviations: 1119325540099.272
[2025-04-17 14:48:50] 2025-04-17 18:48:18,585 | INFO     | sum of deviations: 1906714278684.9878
[2025-04-17 14:48:50] 2025-04-17 18:48:18,586 | INFO     | mean x: 1744868547.1649282
[2025-04-17 14:48:50] 2025-04-17 18:48:18,586 | INFO     | mean y: 2634689.434810952
[2025-04-17 14:48:50] 2025-04-17 18:48:18,586 | INFO     | -- intersect: -2969660370.510514
[2025-04-17 14:48:50] 2025-04-17 18:48:18,586 | INFO     | intersect: -2969660370.510514
[2025-04-17 14:48:50] 2025-04-17 18:48:18,588 | INFO     | chi2: 5.962525522101183
[2025-04-17 14:48:50] 2025-04-17 18:48:18,589 | INFO     | current chi2=5.962525522101183 (change=21.89365028356066 %)
[2025-04-17 14:48:50] 2025-04-17 18:48:18,589 | INFO     | right removable region: 1533
[2025-04-17 14:48:50] 2025-04-17 18:48:18,591 | INFO     | sum of square deviations: 1119323982159.272
[2025-04-17 14:48:50] 2025-04-17 18:48:18,673 | INFO     | sum of deviations: 1234116263874.358
[2025-04-17 14:48:50] 2025-04-17 18:48:18,673 | INFO     | mean x: 1744868852.1649282
[2025-04-17 14:48:50] 2025-04-17 18:48:18,673 | INFO     | mean y: 2637930.259452412
[2025-04-17 14:48:50] 2025-04-17 18:48:18,673 | INFO     | -- intersect: -1921175963.757616
[2025-04-17 14:48:50] 2025-04-17 18:48:18,674 | INFO     | intersect: -1921175963.757616
[2025-04-17 14:48:50] 2025-04-17 18:48:18,676 | INFO     | chi2: 4.801980638275515
[2025-04-17 14:48:50] 2025-04-17 18:48:18,676 | INFO     | current chi2=4.801980638275515 (change=37.096255995136495 %)
[2025-04-17 14:48:50] 2025-04-17 18:48:18,678 | INFO     | sum of square deviations: 1108413724207.868
[2025-04-17 14:48:50] 2025-04-17 18:48:18,759 | INFO     | sum of deviations: 902116353614.8611
[2025-04-17 14:48:50] 2025-04-17 18:48:18,759 | INFO     | mean x: 1744869004.6703727
[2025-04-17 14:48:50] 2025-04-17 18:48:18,759 | INFO     | mean y: 2642570.7894048397
[2025-04-17 14:48:50] 2025-04-17 18:48:18,760 | INFO     | -- intersect: -1417472346.277097
[2025-04-17 14:48:50] 2025-04-17 18:48:18,760 | INFO     | intersect: -1417472346.277097
[2025-04-17 14:48:50] 2025-04-17 18:48:18,762 | INFO     | chi2: 3.3739069805394726
[2025-04-17 14:48:50] 2025-04-17 18:48:18,762 | INFO     | current chi2=3.3739069805394726 (change=29.739263135573392 %)
[2025-04-17 14:48:50] 2025-04-17 18:48:18,764 | INFO     | sum of square deviations: 1097574676896.2241
[2025-04-17 14:48:50] 2025-04-17 18:48:18,846 | INFO     | sum of deviations: 607424526952.2035
[2025-04-17 14:48:50] 2025-04-17 18:48:18,846 | INFO     | mean x: 1744869157.175197
[2025-04-17 14:48:50] 2025-04-17 18:48:18,847 | INFO     | mean y: 2646715.9842519686
[2025-04-17 14:48:50] 2025-04-17 18:48:18,847 | INFO     | -- intersect: -963006323.1217563
[2025-04-17 14:48:50] 2025-04-17 18:48:18,847 | INFO     | intersect: -963006323.1217563
[2025-04-17 14:48:50] 2025-04-17 18:48:18,849 | INFO     | chi2: 2.2128046467180953
[2025-04-17 14:48:50] 2025-04-17 18:48:18,849 | INFO     | current chi2=2.2128046467180953 (change=34.4141774067441 %)
[2025-04-17 14:48:50] 2025-04-17 18:48:18,852 | INFO     | sum of square deviations: 1086806514878.5055
[2025-04-17 14:48:50] 2025-04-17 18:48:18,930 | INFO     | sum of deviations: 448024484845.96405
[2025-04-17 14:48:50] 2025-04-17 18:48:18,930 | INFO     | mean x: 1744869309.6800528
[2025-04-17 14:48:50] 2025-04-17 18:48:18,930 | INFO     | mean y: 2648972.952600395
[2025-04-17 14:48:50] 2025-04-17 18:48:18,930 | INFO     | -- intersect: -716654935.232317
[2025-04-17 14:48:50] 2025-04-17 18:48:18,931 | INFO     | intersect: -716654935.232317
[2025-04-17 14:48:50] 2025-04-17 18:48:18,933 | INFO     | chi2: 1.8896306106351428
[2025-04-17 14:48:50] 2025-04-17 18:48:18,933 | INFO     | current chi2=1.8896306106351428 (change=14.604725119420985 %)
[2025-04-17 14:48:50] 2025-04-17 18:48:18,933 | INFO     | left removable region: 40
[2025-04-17 14:48:50] 2025-04-17 18:48:18,935 | INFO     | sum of square deviations: 1031949518826.2701
[2025-04-17 14:48:50] 2025-04-17 18:48:19,010 | INFO     | sum of deviations: 486577456623.9346
[2025-04-17 14:48:50] 2025-04-17 18:48:19,011 | INFO     | mean x: 1744869736.6918955
[2025-04-17 14:48:50] 2025-04-17 18:48:19,011 | INFO     | mean y: 2654718.0194239784
[2025-04-17 14:48:50] 2025-04-17 18:48:19,011 | INFO     | -- intersect: -820073780.9339725
[2025-04-17 14:48:50] 2025-04-17 18:48:19,012 | INFO     | intersect: -820073780.9339725
[2025-04-17 14:48:50] 2025-04-17 18:48:19,014 | INFO     | chi2: 0.02404830789740649
[2025-04-17 14:48:50] 2025-04-17 18:48:19,014 | INFO     | -- intersect: -820073780.9339725
[2025-04-17 14:48:50] 2025-04-17 18:48:19,014 | INFO     | current memory leak: 0.47 B/s (using 1493 data points, chi2=0.02)
[2025-04-17 14:48:50] 2025-04-17 18:48:19,016 | INFO     | ..............................
[2025-04-17 14:48:50] 2025-04-17 18:48:19,016 | INFO     | . Timing measurements:
[2025-04-17 14:48:50] 2025-04-17 18:48:19,016 | INFO     | . get job = 0 s
[2025-04-17 14:48:50] 2025-04-17 18:48:19,016 | INFO     | . initial setup = 3 s
[2025-04-17 14:48:50] 2025-04-17 18:48:19,017 | INFO     | . payload setup = 8 s
[2025-04-17 14:48:50] 2025-04-17 18:48:19,017 | INFO     | . stage-in = 0 s
[2025-04-17 14:48:50] 2025-04-17 18:48:19,017 | INFO     | . payload execution = 93874 s
[2025-04-17 14:48:50] 2025-04-17 18:48:19,017 | INFO     | . stage-out = 3 s
[2025-04-17 14:48:50] 2025-04-17 18:48:19,017 | INFO     | . log creation = 0 s
[2025-04-17 14:48:50] 2025-04-17 18:48:19,017 | INFO     | ..............................
[2025-04-17 14:48:50] 2025-04-17 18:48:19,319 | INFO     | 
[2025-04-17 14:48:50] 2025-04-17 18:48:19,333 | INFO     | job summary report
[2025-04-17 14:48:50] 2025-04-17 18:48:19,334 | INFO     | --------------------------------------------------
[2025-04-17 14:48:50] 2025-04-17 18:48:19,334 | INFO     | PanDA job id: 6603969979
[2025-04-17 14:48:50] 2025-04-17 18:48:19,334 | INFO     | task id: 44075483
[2025-04-17 14:48:50] 2025-04-17 18:48:19,334 | INFO     | errors: (none)
[2025-04-17 14:48:50] 2025-04-17 18:48:19,357 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 14:48:50] 2025-04-17 18:48:19,357 | INFO     | pilot state: finished 
[2025-04-17 14:48:50] 2025-04-17 18:48:19,357 | INFO     | transexitcode: 0
[2025-04-17 14:48:50] 2025-04-17 18:48:19,357 | INFO     | exeerrorcode: 0
[2025-04-17 14:48:50] 2025-04-17 18:48:19,375 | INFO     | exeerrordiag: 
[2025-04-17 14:48:50] 2025-04-17 18:48:19,376 | INFO     | exitcode: 0
[2025-04-17 14:48:50] 2025-04-17 18:48:19,376 | INFO     | exitmsg: OK
[2025-04-17 14:48:50] 2025-04-17 18:48:19,376 | INFO     | cpuconsumptiontime: 104281 s
[2025-04-17 14:48:50] 2025-04-17 18:48:19,376 | INFO     | nevents: 400
[2025-04-17 14:48:50] 2025-04-17 18:48:19,376 | INFO     | neventsw: 0
[2025-04-17 14:48:50] 2025-04-17 18:48:19,377 | INFO     | pid: 28396
[2025-04-17 14:48:50] 2025-04-17 18:48:19,377 | INFO     | pgrp: 28396
[2025-04-17 14:48:50] 2025-04-17 18:48:19,377 | INFO     | corecount: 12
[2025-04-17 14:48:50] 2025-04-17 18:48:19,377 | INFO     | event service: False
[2025-04-17 14:48:50] 2025-04-17 18:48:19,377 | INFO     | sizes: {0: 2417195, 1: 2417394, 7: 2417600, 12: 2417628, 93889: 2479072, 93893: 2497471, 93895: 2497655, 93926: 2497825}
[2025-04-17 14:48:50] 2025-04-17 18:48:19,378 | INFO     | --------------------------------------------------
[2025-04-17 14:48:50] 2025-04-17 18:48:19,378 | INFO     | 
[2025-04-17 14:48:50] 2025-04-17 18:48:19,378 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 14:48:50] 2025-04-17 18:48:19,719 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,720 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,720 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,720 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,720 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,721 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,721 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,721 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,721 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,721 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,722 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,722 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,722 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,722 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,722 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,722 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,723 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 14:48:50] 2025-04-17 18:48:19,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,723 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 14:48:50] 2025-04-17 18:48:19,723 | INFO     | job 6603969979 has completed (purged errors)
[2025-04-17 14:48:50] 2025-04-17 18:48:19,724 | INFO     | overall cleanup function is called
[2025-04-17 14:48:50] 2025-04-17 18:48:20,745 | INFO     | --- collectZombieJob: --- 10, [28396]
[2025-04-17 14:48:50] 2025-04-17 18:48:20,746 | INFO     | zombie collector waiting for pid 28396
[2025-04-17 14:48:50] 2025-04-17 18:48:20,746 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 14:48:50] 2025-04-17 18:48:20,746 | INFO     | collected zombie processes
[2025-04-17 14:48:50] 2025-04-17 18:48:20,746 | INFO     | will attempt to kill all subprocesses of pid=28396
[2025-04-17 14:48:50] 2025-04-17 18:48:21,069 | INFO     | process IDs to be killed: [28396] (in reverse order)
[2025-04-17 14:48:50] 2025-04-17 18:48:21,344 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 14:48:50] 2025-04-17 18:48:21,344 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 14:48:50] 2025-04-17 18:48:21,354 | INFO     | did not find any defunct processes belonging to 28396
[2025-04-17 14:48:50] 2025-04-17 18:48:21,363 | INFO     | did not find any defunct processes belonging to 28396
[2025-04-17 14:48:50] 2025-04-17 18:48:21,363 | INFO     | ready for new job
[2025-04-17 14:48:50] 2025-04-17 18:48:21,363 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 14:48:50] 2025-04-17 18:48:21,367 | INFO     | **************************************
[2025-04-17 14:48:50] 2025-04-17 18:48:21,367 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 14:48:50] 2025-04-17 18:48:21,367 | INFO     | **************************************
[2025-04-17 14:48:50] 2025-04-17 18:48:21,367 | INFO     | 
[2025-04-17 14:48:50] 2025-04-17 18:48:21,369 | INFO     | architecture information:
[2025-04-17 14:48:50] 2025-04-17 18:48:21,370 | INFO     | executing command: cat /etc/os-release
[2025-04-17 14:48:50] 2025-04-17 18:48:21,499 | INFO     | cat /etc/os-release:
[2025-04-17 14:48:50] NAME="CentOS Linux"
[2025-04-17 14:48:50] VERSION="7 (Core)"
[2025-04-17 14:48:50] ID="centos"
[2025-04-17 14:48:50] ID_LIKE="rhel fedora"
[2025-04-17 14:48:50] VERSION_ID="7"
[2025-04-17 14:48:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 14:48:50] ANSI_COLOR="0;31"
[2025-04-17 14:48:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 14:48:50] HOME_URL="https://www.centos.org/"
[2025-04-17 14:48:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 14:48:50] 
[2025-04-17 14:48:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 14:48:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 14:48:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 14:48:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 14:48:50] 
[2025-04-17 14:48:50] 2025-04-17 18:48:21,519 | INFO     | **************************************
[2025-04-17 14:48:50] 2025-04-17 18:48:22,024 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 14:48:50] 2025-04-17 18:48:22,308 | INFO     | sufficient remaining disk space (29200744448 B)
[2025-04-17 14:48:50] 2025-04-17 18:48:22,309 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 14:48:50] 2025-04-17 18:48:22,309 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 14:48:50] 2025-04-17 18:48:22,335 | INFO     | update_server=False
[2025-04-17 14:48:50] 2025-04-17 18:48:22,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 14:48:50] 2025-04-17 18:48:22,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 14:48:50] 2025-04-17 18:48:22,345 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-04-17 14:48:50] 2025-04-17 18:48:22,346 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 14:48:50] 2025-04-17 18:48:22,346 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 14:48:50] 2025-04-17 18:48:22,346 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 14:48:50] 2025-04-17 18:48:22,596 | INFO     | all payload control threads have been joined
[2025-04-17 14:48:50] 2025-04-17 18:48:22,621 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 14:48:50] 2025-04-17 18:48:22,622 | INFO     | aborting loop
[2025-04-17 14:48:50] 2025-04-17 18:48:22,706 | INFO     | all job control threads have been joined
[2025-04-17 14:48:50] 2025-04-17 18:48:23,247 | INFO     | all data control threads have been joined
[2025-04-17 14:48:50] 2025-04-17 18:48:23,340 | INFO     | [job] retrieve thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:23,440 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:23,454 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:23,604 | INFO     | [payload] control thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:23,629 | INFO     | [job] job monitor thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:23,714 | INFO     | [job] control thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:23,840 | INFO     | [payload] validate_post thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:24,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 14:48:50] 2025-04-17 18:48:24,253 | INFO     | [data] control thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:24,343 | INFO     | [data] copytool_out thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:24,370 | INFO     | [job] validate thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:24,458 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:24,719 | INFO     | [payload] failed_post thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:24,844 | INFO     | [data] copytool_in thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:24,857 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:25,212 | INFO     | [job] queue monitor thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:25,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 14:48:50] 2025-04-17 18:48:29,249 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 14:48:50] 2025-04-17 18:48:29,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140636127741760)>', '<ExcThread(monitor, started 140635549988608)>']
[2025-04-17 14:48:50] 2025-04-17 18:48:30,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 14:48:50] 2025-04-17 18:48:30,426 | INFO     | [monitor] control thread has ended
[2025-04-17 14:48:50] 2025-04-17 18:48:34,898 | INFO     | all workflow threads have been joined
[2025-04-17 14:48:50] 2025-04-17 18:48:34,899 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 14:48:50] 2025-04-17 18:48:34,919 | INFO     | traces error code: 0
[2025-04-17 14:48:50] 2025-04-17 18:48:34,919 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 14:48:50] 2025-04-17 18:48:36,877 [wrapper] ==== pilot stdout END ====
[2025-04-17 14:48:50] 2025-04-17 18:48:36,917 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 14:48:50] 2025-04-17 18:48:36,947 [wrapper] pilotpid: 18873
[2025-04-17 14:48:50] 2025-04-17 18:48:36,991 [wrapper] Pilot exit status: 0
[2025-04-17 14:48:50] 2025-04-17 18:48:37,265 [wrapper] pandaids: 6603969979
[2025-04-17 14:48:50] 2025-04-17 18:48:37,381 [wrapper] cleanup supervisor_pilot 11361 18874
[2025-04-17 14:48:50] 2025-04-17 18:48:37,414 [wrapper] Test setup, not cleaning
[2025-04-17 14:48:50] 2025-04-17 18:48:37,436 [wrapper] apfmon messages muted
[2025-04-17 14:48:50] 2025-04-17 18:48:37,439 [wrapper] ==== wrapper stdout END ====
[2025-04-17 14:48:50] 2025-04-17 18:48:37,442 [wrapper] ==== wrapper stderr END ====
[2025-04-17 14:48:50]  *** Error codes and diagnostics ***
[2025-04-17 14:48:50]     "exeErrorCode": 0,
[2025-04-17 14:48:50]     "exeErrorDiag": "",
[2025-04-17 14:48:50]     "pilotErrorCode": 0,
[2025-04-17 14:48:50]     "pilotErrorDiag": "",
[2025-04-17 14:48:50]  *** Listing of results directory ***
[2025-04-17 14:48:51] total 432084
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 08:59 pilot3.tar.gz
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 09:01 queuedata.json
[2025-04-17 14:48:51] -rwx------ 1 boincer umatlas     37140 Apr 16 09:01 runpilot2-wrapper.sh
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas       100 Apr 16 12:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 14:48:51] -rwxr-xr-x 1 boincer umatlas      7986 Apr 16 12:41 run_atlas
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas       105 Apr 16 12:41 job.xml
[2025-04-17 14:48:51] -rw-r--r-- 2 boincer umatlas 225691919 Apr 16 12:42 EVNT.44075481._001595.pool.root.1
[2025-04-17 14:48:51] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 12:42 start_atlas.sh
[2025-04-17 14:48:51] drwxrwx--x 2 boincer umatlas      4096 Apr 16 12:42 shared
[2025-04-17 14:48:51] -rw-r--r-- 2 boincer umatlas    508891 Apr 16 12:42 input.tar.gz
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas         0 Apr 16 12:42 boinc_lockfile
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas      2579 Apr 16 12:42 pandaJob.out
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas       467 Apr 16 12:42 setup.sh.local
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas    986568 Apr 16 12:42 agis_schedconf.cvmfs.json
[2025-04-17 14:48:51] drwx------ 4 boincer umatlas      4096 Apr 16 12:42 pilot3
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas      5952 Apr 17 14:39 init_data.xml
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas 198626840 Apr 17 14:44 HITS.44075483._040695.pool.root.1
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas       532 Apr 17 14:45 boinc_task_state.xml
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas      1069 Apr 17 14:47 memory_monitor_summary.json
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas   1618536 Apr 17 14:47 agis_ddmendpoints.agis.ALL.json
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas   1039833 Apr 17 14:47 log.44075483._040695.job.log.tgz.1
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas        95 Apr 17 14:48 pilot_heartbeat.json
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas      7788 Apr 17 14:48 heartbeat.json
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas      4476 Apr 17 14:48 pilotlog.txt
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas   6102985 Apr 17 14:48 log.44075483._040695.job.log.1
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas       357 Apr 17 14:48 output.list
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas       620 Apr 17 14:48 runtime_log
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas   7157760 Apr 17 14:48 result.tar.gz
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas       666 Apr 17 14:48 NbQLDmpZHP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmgMaLDmiTtSNn.diag
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas     11530 Apr 17 14:48 runtime_log.err
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 14:48 boinc_mmap_file
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas        29 Apr 17 14:48 wrapper_checkpoint.txt
[2025-04-17 14:48:51] -rw-r--r-- 1 boincer umatlas     20822 Apr 17 14:48 stderr.txt
[2025-04-17 14:48:51] HITS file was successfully produced:
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas 198626840 Apr 17 14:44 shared/HITS.pool.root.1
[2025-04-17 14:48:51]  *** Contents of shared directory: ***
[2025-04-17 14:48:51] total 421892
[2025-04-17 14:48:51] -rw-r--r-- 2 boincer umatlas 225691919 Apr 16 12:42 ATLAS.root_0
[2025-04-17 14:48:51] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 12:42 start_atlas.sh
[2025-04-17 14:48:51] -rw-r--r-- 2 boincer umatlas    508891 Apr 16 12:42 input.tar.gz
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas 198626840 Apr 17 14:44 HITS.pool.root.1
[2025-04-17 14:48:51] -rw------- 1 boincer umatlas   7157760 Apr 17 14:48 result.tar.gz
14:48:52 (10857): run_atlas exited; CPU time 106898.155571
14:48:52 (10857): called boinc_finish(0)

</stderr_txt>
]]>

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