Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:47:50 (6955): wrapper (7.7.26015): starting
11:47:50 (6955): wrapper: running run_atlas (--nthreads 12)
[2025-04-16 11:47:50] Arguments: --nthreads 12
[2025-04-16 11:47:50] Threads: 12
[2025-04-16 11:47:50] Checking for CVMFS
[2025-04-16 11:47:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 11:47:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 11:47:50] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 11:47:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 11:47:51] 2.11.2.0 2970 8827 84556 144929 0 56 15261965 20275201 1 130560 0 7755367 99.993 1610848 59869 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-16 11:47:51] CVMFS is ok
[2025-04-16 11:47:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 11:47:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 11:47:51] Further information can be found at the LHC@home message board.
[2025-04-16 11:47:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 11:47:51] Checking for apptainer binary...
[2025-04-16 11:47:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 11:47:51] Running /usr/bin/apptainer --version
[2025-04-16 11:47:51] apptainer version 1.3.2-1.el7
[2025-04-16 11:47:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 11:47:52] c-115-42.aglt2.org
[2025-04-16 11:47:52] apptainer works
[2025-04-16 11:47:52] Set ATHENA_PROC_NUMBER=12
[2025-04-16 11:47:52] Set ATHENA_CORE_NUMBER=12
[2025-04-16 11:47:52] Starting ATLAS job with PandaID=6603702747
[2025-04-16 11:47:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 13:05:32]  *** The last 200 lines of the pilot log: ***
[2025-04-16 13:05:32]  lfn=log.44075483._037840.job.log.tgz.1
[2025-04-16 13:05:32]  mtime=0
[2025-04-16 13:05:32]  protocol_id=None
[2025-04-16 13:05:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-04-16 13:05:32]  replicas=None
[2025-04-16 13:05:32]  scope=mc23_13p6TeV
[2025-04-16 13:05:32]  status=None
[2025-04-16 13:05:32]  status_code=0
[2025-04-16 13:05:32]  storage_token=
[2025-04-16 13:05:32]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6603702747/log.44075483._037840.job.log.tgz.1
[2025-04-16 13:05:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/a1/log.44075483._037840.job.log.tgz.1
[2025-04-16 13:05:32]  workdir=None
[2025-04-16 13:05:32] ]
[2025-04-16 13:05:32] 2025-04-16 17:05:03,931 | INFO     | transferring file log.44075483._037840.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6603702747/log.44075483._037840.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-04-16 13:05:32] 2025-04-16 17:05:03,931 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6603702747/log.44075483._037840.job.log.tgz.1 /tmp/boinchome/slots/0/log.44075483._037840.job
[2025-04-16 13:05:32] 2025-04-16 17:05:03,950 | INFO     | adding to output.list: log.44075483._037840.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1b/a1/log.44075483._037840.job.log.tg
[2025-04-16 13:05:32] 2025-04-16 17:05:03,951 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-04-16 13:05:32] 2025-04-16 17:05:03,951 | INFO     | summary of transferred files:
[2025-04-16 13:05:32] 2025-04-16 17:05:03,952 | INFO     |  -- lfn=log.44075483._037840.job.log.tgz.1, status_code=0, status=transferred
[2025-04-16 13:05:32] 2025-04-16 17:05:03,952 | INFO     | stage-out finished correctly
[2025-04-16 13:05:32] 2025-04-16 17:05:04,034 | INFO     | monitor loop #347: job 0:6603702747 is in state 'finished'
[2025-04-16 13:05:32] 2025-04-16 17:05:04,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 13:05:32] 2025-04-16 17:05:04,156 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-04-16 13:05:32] 2025-04-16 17:05:06,538 | INFO     | monitor loop #348: job 0:6603702747 is in state 'finished'
[2025-04-16 13:05:32] 2025-04-16 17:05:06,538 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 13:05:32] 2025-04-16 17:05:06,852 | INFO     | job 6603702747 has state=finished
[2025-04-16 13:05:32] 2025-04-16 17:05:06,852 | INFO     | preparing for final server update for job 6603702747 in state='finished'
[2025-04-16 13:05:32] 2025-04-16 17:05:06,853 | INFO     | this job has now completed (state=finished)
[2025-04-16 13:05:32] 2025-04-16 17:05:06,853 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-04-16 13:05:32] 2025-04-16 17:05:06,853 | INFO     | log transfer has been attempted: DONE
[2025-04-16 13:05:32] 2025-04-16 17:05:06,853 | INFO     | job 6603702747 has finished - writing final server update
[2025-04-16 13:05:32] 2025-04-16 17:05:06,854 | INFO     | total number of processed events: 400 (read)
[2025-04-16 13:05:32] 2025-04-16 17:05:06,855 | INFO     | executing command: lscpu
[2025-04-16 13:05:32] 2025-04-16 17:05:06,882 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-04-16 13:05:32] 2025-04-16 17:05:09,041 | INFO     | monitor loop #349: job 0:6603702747 is in state 'finished'
[2025-04-16 13:05:32] 2025-04-16 17:05:09,042 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 13:05:32] 2025-04-16 17:05:11,543 | INFO     | CPU arch script returned: x86-64-v2
[2025-04-16 13:05:32] 2025-04-16 17:05:11,543 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6603702747/memory_monitor_summary.json (trf name=prmon)
[2025-04-16 13:05:32] 2025-04-16 17:05:11,544 | INFO     | extracted standard info from prmon json
[2025-04-16 13:05:32] 2025-04-16 17:05:11,544 | INFO     | extracted standard memory fields from prmon json
[2025-04-16 13:05:32] 2025-04-16 17:05:11,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-04-16 13:05:32] 2025-04-16 17:05:11,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-04-16 13:05:32] 2025-04-16 17:05:11,545 | INFO     | monitor loop #350: job 0:6603702747 is in state 'finished'
[2025-04-16 13:05:32] 2025-04-16 17:05:11,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-04-16 13:05:32] 2025-04-16 17:05:11,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-04-16 13:05:32] 2025-04-16 17:05:11,548 | INFO     | fitting pss+swap vs Time
[2025-04-16 13:05:32] 2025-04-16 17:05:11,549 | INFO     | sum of square deviations: 101843770.0
[2025-04-16 13:05:32] 2025-04-16 17:05:11,549 | INFO     | sum of deviations: 19487555686.0
[2025-04-16 13:05:32] 2025-04-16 17:05:11,550 | INFO     | mean x: 1744820892.0
[2025-04-16 13:05:32] 2025-04-16 17:05:11,550 | INFO     | mean y: 2560694.5942028984
[2025-04-16 13:05:32] 2025-04-16 17:05:11,550 | INFO     | -- intersect: -333864638987.293
[2025-04-16 13:05:32] 2025-04-16 17:05:11,550 | INFO     | intersect: -333864638987.293
[2025-04-16 13:05:32] 2025-04-16 17:05:11,550 | INFO     | chi2: 1.8563088370548468
[2025-04-16 13:05:32] 2025-04-16 17:05:11,550 | INFO     | -- intersect: -333864638987.293
[2025-04-16 13:05:32] 2025-04-16 17:05:11,550 | INFO     | current memory leak: 191.35 B/s (using 69 data points, chi2=1.86)
[2025-04-16 13:05:32] 2025-04-16 17:05:11,551 | INFO     | ..............................
[2025-04-16 13:05:32] 2025-04-16 17:05:11,551 | INFO     | . Timing measurements:
[2025-04-16 13:05:32] 2025-04-16 17:05:11,551 | INFO     | . get job = 0 s
[2025-04-16 13:05:32] 2025-04-16 17:05:11,551 | INFO     | . initial setup = 2 s
[2025-04-16 13:05:32] 2025-04-16 17:05:11,551 | INFO     | . payload setup = 7 s
[2025-04-16 13:05:32] 2025-04-16 17:05:11,551 | INFO     | . stage-in = 0 s
[2025-04-16 13:05:32] 2025-04-16 17:05:11,551 | INFO     | . payload execution = 4592 s
[2025-04-16 13:05:32] 2025-04-16 17:05:11,551 | INFO     | . stage-out = 0 s
[2025-04-16 13:05:32] 2025-04-16 17:05:11,552 | INFO     | . log creation = 0 s
[2025-04-16 13:05:32] 2025-04-16 17:05:11,552 | INFO     | ..............................
[2025-04-16 13:05:32] 2025-04-16 17:05:12,020 | INFO     | 
[2025-04-16 13:05:32] 2025-04-16 17:05:12,020 | INFO     | job summary report
[2025-04-16 13:05:32] 2025-04-16 17:05:12,021 | INFO     | --------------------------------------------------
[2025-04-16 13:05:32] 2025-04-16 17:05:12,021 | INFO     | PanDA job id: 6603702747
[2025-04-16 13:05:32] 2025-04-16 17:05:12,021 | INFO     | task id: 44075483
[2025-04-16 13:05:32] 2025-04-16 17:05:12,021 | INFO     | errors: (none)
[2025-04-16 13:05:32] 2025-04-16 17:05:12,021 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 13:05:32] 2025-04-16 17:05:12,021 | INFO     | pilot state: finished 
[2025-04-16 13:05:32] 2025-04-16 17:05:12,022 | INFO     | transexitcode: 0
[2025-04-16 13:05:32] 2025-04-16 17:05:12,022 | INFO     | exeerrorcode: 0
[2025-04-16 13:05:32] 2025-04-16 17:05:12,022 | INFO     | exeerrordiag: 
[2025-04-16 13:05:32] 2025-04-16 17:05:12,022 | INFO     | exitcode: 0
[2025-04-16 13:05:32] 2025-04-16 17:05:12,022 | INFO     | exitmsg: OK
[2025-04-16 13:05:32] 2025-04-16 17:05:12,022 | INFO     | cpuconsumptiontime: 43651 s
[2025-04-16 13:05:32] 2025-04-16 17:05:12,022 | INFO     | nevents: 400
[2025-04-16 13:05:32] 2025-04-16 17:05:12,023 | INFO     | neventsw: 0
[2025-04-16 13:05:32] 2025-04-16 17:05:12,023 | INFO     | pid: 16988
[2025-04-16 13:05:32] 2025-04-16 17:05:12,023 | INFO     | pgrp: 16988
[2025-04-16 13:05:32] 2025-04-16 17:05:12,023 | INFO     | corecount: 12
[2025-04-16 13:05:32] 2025-04-16 17:05:12,023 | INFO     | event service: False
[2025-04-16 13:05:32] 2025-04-16 17:05:12,023 | INFO     | sizes: {0: 2417365, 5: 2417571, 11: 2417627, 4603: 2443636, 4604: 2452633, 4611: 2452747}
[2025-04-16 13:05:32] 2025-04-16 17:05:12,024 | INFO     | --------------------------------------------------
[2025-04-16 13:05:32] 2025-04-16 17:05:12,024 | INFO     | 
[2025-04-16 13:05:32] 2025-04-16 17:05:12,024 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-16 13:05:32] 2025-04-16 17:05:12,047 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,048 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,048 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,048 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,048 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,048 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,049 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,049 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,049 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,049 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,049 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,049 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,050 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,050 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,050 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,050 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,050 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,050 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 13:05:32] 2025-04-16 17:05:12,050 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,051 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 13:05:32] 2025-04-16 17:05:12,051 | INFO     | job 6603702747 has completed (purged errors)
[2025-04-16 13:05:32] 2025-04-16 17:05:12,051 | INFO     | overall cleanup function is called
[2025-04-16 13:05:32] 2025-04-16 17:05:13,059 | INFO     | --- collectZombieJob: --- 10, [16988]
[2025-04-16 13:05:32] 2025-04-16 17:05:13,060 | INFO     | zombie collector waiting for pid 16988
[2025-04-16 13:05:32] 2025-04-16 17:05:13,060 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 13:05:32] 2025-04-16 17:05:13,060 | INFO     | collected zombie processes
[2025-04-16 13:05:32] 2025-04-16 17:05:13,060 | INFO     | will attempt to kill all subprocesses of pid=16988
[2025-04-16 13:05:32] 2025-04-16 17:05:13,158 | INFO     | process IDs to be killed: [16988] (in reverse order)
[2025-04-16 13:05:32] 2025-04-16 17:05:13,207 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 13:05:32] 2025-04-16 17:05:13,208 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 13:05:32] 2025-04-16 17:05:13,211 | INFO     | did not find any defunct processes belonging to 16988
[2025-04-16 13:05:32] 2025-04-16 17:05:13,213 | INFO     | did not find any defunct processes belonging to 16988
[2025-04-16 13:05:32] 2025-04-16 17:05:13,213 | INFO     | ready for new job
[2025-04-16 13:05:32] 2025-04-16 17:05:13,213 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 13:05:32] 2025-04-16 17:05:13,215 | INFO     | **************************************
[2025-04-16 13:05:32] 2025-04-16 17:05:13,215 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 13:05:32] 2025-04-16 17:05:13,215 | INFO     | **************************************
[2025-04-16 13:05:32] 2025-04-16 17:05:13,215 | INFO     | 
[2025-04-16 13:05:32] 2025-04-16 17:05:13,215 | INFO     | architecture information:
[2025-04-16 13:05:32] 2025-04-16 17:05:13,216 | INFO     | executing command: cat /etc/os-release
[2025-04-16 13:05:32] 2025-04-16 17:05:13,231 | INFO     | cat /etc/os-release:
[2025-04-16 13:05:32] NAME="CentOS Linux"
[2025-04-16 13:05:32] VERSION="7 (Core)"
[2025-04-16 13:05:32] ID="centos"
[2025-04-16 13:05:32] ID_LIKE="rhel fedora"
[2025-04-16 13:05:32] VERSION_ID="7"
[2025-04-16 13:05:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 13:05:32] ANSI_COLOR="0;31"
[2025-04-16 13:05:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 13:05:32] HOME_URL="https://www.centos.org/"
[2025-04-16 13:05:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 13:05:32] 
[2025-04-16 13:05:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 13:05:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 13:05:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 13:05:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 13:05:32] 
[2025-04-16 13:05:32] 2025-04-16 17:05:13,232 | INFO     | **************************************
[2025-04-16 13:05:32] 2025-04-16 17:05:13,735 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-16 13:05:32] 2025-04-16 17:05:13,751 | INFO     | sufficient remaining disk space (18619564032 B)
[2025-04-16 13:05:32] 2025-04-16 17:05:13,751 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 13:05:32] 2025-04-16 17:05:13,752 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 13:05:32] 2025-04-16 17:05:13,752 | INFO     | update_server=False
[2025-04-16 13:05:32] 2025-04-16 17:05:13,752 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 13:05:32] 2025-04-16 17:05:14,028 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 13:05:32] 2025-04-16 17:05:14,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 13:05:32] 2025-04-16 17:05:14,029 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 13:05:32] 2025-04-16 17:05:14,052 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-04-16 13:05:32] 2025-04-16 17:05:14,052 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-04-16 13:05:32] 2025-04-16 17:05:14,052 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 13:05:32] 2025-04-16 17:05:14,052 | INFO     | will abort loop
[2025-04-16 13:05:32] 2025-04-16 17:05:14,124 | INFO     | all job control threads have been joined
[2025-04-16 13:05:32] 2025-04-16 17:05:14,379 | INFO     | all data control threads have been joined
[2025-04-16 13:05:32] 2025-04-16 17:05:14,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 13:05:32] 2025-04-16 17:05:14,740 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 13:05:32] 2025-04-16 17:05:14,758 | INFO     | [job] retrieve thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:15,021 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:15,058 | INFO     | [job] job monitor thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:15,122 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:15,130 | INFO     | [job] control thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:15,159 | INFO     | all payload control threads have been joined
[2025-04-16 13:05:32] 2025-04-16 17:05:15,205 | INFO     | [data] copytool_in thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:15,384 | INFO     | [data] control thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:15,451 | INFO     | [payload] validate_post thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:16,164 | INFO     | [payload] control thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:16,175 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:16,183 | INFO     | [job] validate thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:16,309 | INFO     | [payload] failed_post thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:16,554 | INFO     | [data] copytool_out thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:16,638 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 13:05:32] 2025-04-16 17:05:17,643 | INFO     | [job] queue monitor thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:18,746 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:24,037 | INFO     | job.realtimelogging is not enabled
[2025-04-16 13:05:32] 2025-04-16 17:05:25,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 13:05:32] 2025-04-16 17:05:26,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140238607755072)>', '<ExcThread(monitor, started 140237703464704)>']
[2025-04-16 13:05:32] 2025-04-16 17:05:27,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 13:05:32] 2025-04-16 17:05:27,091 | INFO     | [monitor] control thread has ended
[2025-04-16 13:05:32] 2025-04-16 17:05:31,765 | INFO     | all workflow threads have been joined
[2025-04-16 13:05:32] 2025-04-16 17:05:31,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 13:05:32] 2025-04-16 17:05:31,765 | INFO     | traces error code: 0
[2025-04-16 13:05:32] 2025-04-16 17:05:31,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 13:05:32] 2025-04-16 17:05:31,870 [wrapper] ==== pilot stdout END ====
[2025-04-16 13:05:32] 2025-04-16 17:05:31,873 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 13:05:32] 2025-04-16 17:05:31,876 [wrapper] pilotpid: 10574
[2025-04-16 13:05:32] 2025-04-16 17:05:31,880 [wrapper] Pilot exit status: 0
[2025-04-16 13:05:32] 2025-04-16 17:05:31,894 [wrapper] pandaids: 6603702747
[2025-04-16 13:05:32] 2025-04-16 17:05:31,930 [wrapper] cleanup supervisor_pilot 20056 10575
[2025-04-16 13:05:32] 2025-04-16 17:05:31,934 [wrapper] Test setup, not cleaning
[2025-04-16 13:05:32] 2025-04-16 17:05:31,937 [wrapper] apfmon messages muted
[2025-04-16 13:05:32] 2025-04-16 17:05:31,940 [wrapper] ==== wrapper stdout END ====
[2025-04-16 13:05:32] 2025-04-16 17:05:31,944 [wrapper] ==== wrapper stderr END ====
[2025-04-16 13:05:32]  *** Error codes and diagnostics ***
[2025-04-16 13:05:32]     "exeErrorCode": 0,
[2025-04-16 13:05:32]     "exeErrorDiag": "",
[2025-04-16 13:05:32]     "pilotErrorCode": 0,
[2025-04-16 13:05:32]     "pilotErrorDiag": "",
[2025-04-16 13:05:32]  *** Listing of results directory ***
[2025-04-16 13:05:32] total 417820
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 03:44 pilot3.tar.gz
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 04:04 queuedata.json
[2025-04-16 13:05:32] -rwx------ 1 boincer umatlas     37140 Apr 16 04:05 runpilot2-wrapper.sh
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas       100 Apr 16 11:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 13:05:32] -rwxr-xr-x 1 boincer umatlas      7986 Apr 16 11:47 run_atlas
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas       105 Apr 16 11:47 job.xml
[2025-04-16 13:05:32] -rw-r--r-- 2 boincer umatlas 223541155 Apr 16 11:47 EVNT.44075481._001487.pool.root.1
[2025-04-16 13:05:32] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 11:47 start_atlas.sh
[2025-04-16 13:05:32] drwxrwx--x 2 boincer umatlas      4096 Apr 16 11:47 shared
[2025-04-16 13:05:32] -rw-r--r-- 2 boincer umatlas    508891 Apr 16 11:47 input.tar.gz
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas         0 Apr 16 11:47 boinc_lockfile
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas      2578 Apr 16 11:47 pandaJob.out
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas       424 Apr 16 11:47 setup.sh.local
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas    986560 Apr 16 11:48 agis_schedconf.cvmfs.json
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas   1603529 Apr 16 11:48 agis_ddmendpoints.agis.ALL.json
[2025-04-16 13:05:32] drwx------ 4 boincer umatlas      4096 Apr 16 11:48 pilot3
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas      5868 Apr 16 13:02 init_data.xml
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas 198832968 Apr 16 13:04 HITS.44075483._037840.pool.root.1
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas       529 Apr 16 13:04 boinc_task_state.xml
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas        95 Apr 16 13:04 pilot_heartbeat.json
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas      1050 Apr 16 13:05 memory_monitor_summary.json
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas    371993 Apr 16 13:05 log.44075483._037840.job.log.tgz.1
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas      7752 Apr 16 13:05 heartbeat.json
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas      8192 Apr 16 13:05 boinc_mmap_file
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas        27 Apr 16 13:05 wrapper_checkpoint.txt
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas      4611 Apr 16 13:05 pilotlog.txt
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas    445626 Apr 16 13:05 log.44075483._037840.job.log.1
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas       357 Apr 16 13:05 output.list
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas       620 Apr 16 13:05 runtime_log
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas    839680 Apr 16 13:05 result.tar.gz
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas     11015 Apr 16 13:05 runtime_log.err
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas       658 Apr 16 13:05 ORhLDm9wCP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDm3tZLDmYqpxhn.diag
[2025-04-16 13:05:32] -rw-r--r-- 1 boincer umatlas     21498 Apr 16 13:05 stderr.txt
[2025-04-16 13:05:32] HITS file was successfully produced:
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas 198832968 Apr 16 13:04 shared/HITS.pool.root.1
[2025-04-16 13:05:32]  *** Contents of shared directory: ***
[2025-04-16 13:05:32] total 413820
[2025-04-16 13:05:32] -rw-r--r-- 2 boincer umatlas 223541155 Apr 16 11:47 ATLAS.root_0
[2025-04-16 13:05:32] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 11:47 start_atlas.sh
[2025-04-16 13:05:32] -rw-r--r-- 2 boincer umatlas    508891 Apr 16 11:47 input.tar.gz
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas 198832968 Apr 16 13:04 HITS.pool.root.1
[2025-04-16 13:05:32] -rw------- 1 boincer umatlas    839680 Apr 16 13:05 result.tar.gz
13:05:33 (6955): run_atlas exited; CPU time 43654.364396
13:05:33 (6955): called boinc_finish(0)

</stderr_txt>
]]>

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