Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:28:08 (756330): wrapper (7.7.26015): starting
12:28:08 (756330): wrapper: running run_atlas (--nthreads 9)
[2025-04-16 12:28:08] Arguments: --nthreads 9
[2025-04-16 12:28:08] Threads: 9
[2025-04-16 12:28:08] Checking for CVMFS
[2025-04-16 12:28:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 12:28:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 12:28:09] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 12:28:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 12:28:10] 2.12.6.0 4157466 208717 294612 144932 0 123 17768283 32935937 17469 130560 0 55277667 99.521 83013333 32415 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-04-16 12:28:10] CVMFS is ok
[2025-04-16 12:28:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 12:28:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 12:28:10] Further information can be found at the LHC@home message board.
[2025-04-16 12:28:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 12:28:10] Checking for apptainer binary...
[2025-04-16 12:28:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 12:28:10] Running /usr/bin/apptainer --version
[2025-04-16 12:28:10] apptainer version 1.4.0-1.el9
[2025-04-16 12:28:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 12:28:11] c6-1-24-2.aglt2.org
[2025-04-16 12:28:11] apptainer works
[2025-04-16 12:28:11] Set ATHENA_PROC_NUMBER=9
[2025-04-16 12:28:11] Set ATHENA_CORE_NUMBER=9
[2025-04-16 12:28:11] Starting ATLAS job with PandaID=6603701373
[2025-04-16 12:28:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-16 16:41:28]  *** The last 200 lines of the pilot log: ***
[2025-04-16 16:41:28] 2025-04-16 20:41:15,140 | INFO     | mean x: 1744828551.7165992
[2025-04-16 16:41:28] 2025-04-16 20:41:15,140 | INFO     | mean y: 2452303.267206478
[2025-04-16 16:41:28] 2025-04-16 20:41:15,140 | INFO     | -- intersect: -26444416796.27194
[2025-04-16 16:41:28] 2025-04-16 20:41:15,140 | INFO     | intersect: -26444416796.27194
[2025-04-16 16:41:28] 2025-04-16 20:41:15,141 | INFO     | chi2: 5.9814747306134946
[2025-04-16 16:41:28] 2025-04-16 20:41:15,141 | INFO     | sum of square deviations: 4394800587.041333
[2025-04-16 16:41:28] 2025-04-16 20:41:15,143 | INFO     | sum of deviations: 84818660235.66937
[2025-04-16 16:41:28] 2025-04-16 20:41:15,143 | INFO     | mean x: 1744828399.231405
[2025-04-16 16:41:28] 2025-04-16 20:41:15,143 | INFO     | mean y: 2459838.6487603304
[2025-04-16 16:41:28] 2025-04-16 20:41:15,143 | INFO     | -- intersect: -33672334781.23362
[2025-04-16 16:41:28] 2025-04-16 20:41:15,143 | INFO     | intersect: -33672334781.23362
[2025-04-16 16:41:28] 2025-04-16 20:41:15,143 | INFO     | chi2: 5.331304935863097
[2025-04-16 16:41:28] 2025-04-16 20:41:15,143 | INFO     | current chi2=5.331304935863097 (change=10.869724006736927 %)
[2025-04-16 16:41:28] 2025-04-16 20:41:15,144 | INFO     | right removable region: 241
[2025-04-16 16:41:28] 2025-04-16 20:41:15,144 | INFO     | sum of square deviations: 4394692617.041333
[2025-04-16 16:41:28] 2025-04-16 20:41:15,145 | INFO     | sum of deviations: 8362206232.520672
[2025-04-16 16:41:28] 2025-04-16 20:41:15,146 | INFO     | mean x: 1744828704.231405
[2025-04-16 16:41:28] 2025-04-16 20:41:15,146 | INFO     | mean y: 2486465.615702479
[2025-04-16 16:41:28] 2025-04-16 20:41:15,146 | INFO     | -- intersect: -3317567685.2995796
[2025-04-16 16:41:28] 2025-04-16 20:41:15,146 | INFO     | intersect: -3317567685.2995796
[2025-04-16 16:41:28] 2025-04-16 20:41:15,146 | INFO     | chi2: 3.23533776303805
[2025-04-16 16:41:28] 2025-04-16 20:41:15,146 | INFO     | current chi2=3.23533776303805 (change=45.91070080962768 %)
[2025-04-16 16:41:28] 2025-04-16 20:41:15,147 | INFO     | sum of square deviations: 4127833626.8101225
[2025-04-16 16:41:28] 2025-04-16 20:41:15,148 | INFO     | sum of deviations: -34039940980.11391
[2025-04-16 16:41:28] 2025-04-16 20:41:15,148 | INFO     | mean x: 1744828856.7468355
[2025-04-16 16:41:28] 2025-04-16 20:41:15,148 | INFO     | mean y: 2510690.5147679327
[2025-04-16 16:41:28] 2025-04-16 20:41:15,148 | INFO     | -- intersect: 14391140822.868208
[2025-04-16 16:41:28] 2025-04-16 20:41:15,148 | INFO     | intersect: 14391140822.868208
[2025-04-16 16:41:28] 2025-04-16 20:41:15,149 | INFO     | chi2: 2.0175951994273285
[2025-04-16 16:41:28] 2025-04-16 20:41:15,149 | INFO     | current chi2=2.0175951994273285 (change=37.6388078401816 %)
[2025-04-16 16:41:28] 2025-04-16 20:41:15,149 | INFO     | sum of square deviations: 3872041103.5
[2025-04-16 16:41:28] 2025-04-16 20:41:15,150 | INFO     | sum of deviations: -68802857997.5
[2025-04-16 16:41:28] 2025-04-16 20:41:15,150 | INFO     | mean x: 1744829009.25
[2025-04-16 16:41:28] 2025-04-16 20:41:15,151 | INFO     | mean y: 2531362.629310345
[2025-04-16 16:41:28] 2025-04-16 20:41:15,151 | INFO     | -- intersect: 31006650209.619843
[2025-04-16 16:41:28] 2025-04-16 20:41:15,151 | INFO     | intersect: 31006650209.619843
[2025-04-16 16:41:28] 2025-04-16 20:41:15,151 | INFO     | chi2: 1.1157284744303548
[2025-04-16 16:41:28] 2025-04-16 20:41:15,151 | INFO     | current chi2=1.1157284744303548 (change=44.70008281408274 %)
[2025-04-16 16:41:28] 2025-04-16 20:41:15,151 | INFO     | sum of square deviations: 3627011787.1542053
[2025-04-16 16:41:28] 2025-04-16 20:41:15,153 | INFO     | sum of deviations: -74141305554.77974
[2025-04-16 16:41:28] 2025-04-16 20:41:15,153 | INFO     | mean x: 1744829161.7621145
[2025-04-16 16:41:28] 2025-04-16 20:41:15,153 | INFO     | mean y: 2534652.374449339
[2025-04-16 16:41:28] 2025-04-16 20:41:15,153 | INFO     | -- intersect: 35669336861.63761
[2025-04-16 16:41:28] 2025-04-16 20:41:15,153 | INFO     | intersect: 35669336861.63761
[2025-04-16 16:41:28] 2025-04-16 20:41:15,154 | INFO     | chi2: 1.0483955182923264
[2025-04-16 16:41:28] 2025-04-16 20:41:15,154 | INFO     | current chi2=1.0483955182923264 (change=6.034887311844033 %)
[2025-04-16 16:41:28] 2025-04-16 20:41:15,154 | INFO     | left removable region: 40
[2025-04-16 16:41:28] 2025-04-16 20:41:15,155 | INFO     | sum of square deviations: 2517971991.552247
[2025-04-16 16:41:28] 2025-04-16 20:41:15,158 | INFO     | sum of deviations: -15929595854.955246
[2025-04-16 16:41:28] 2025-04-16 20:41:15,158 | INFO     | mean x: 1744829588.8208954
[2025-04-16 16:41:28] 2025-04-16 20:41:15,158 | INFO     | mean y: 2513464.7512437813
[2025-04-16 16:41:28] 2025-04-16 20:41:15,158 | INFO     | -- intersect: 11040932588.92516
[2025-04-16 16:41:28] 2025-04-16 20:41:15,158 | INFO     | intersect: 11040932588.92516
[2025-04-16 16:41:28] 2025-04-16 20:41:15,158 | INFO     | chi2: 0.14625371370978277
[2025-04-16 16:41:28] 2025-04-16 20:41:15,159 | INFO     | -- intersect: 11040932588.92516
[2025-04-16 16:41:28] 2025-04-16 20:41:15,159 | INFO     | current memory leak: -6.33 B/s (using 201 data points, chi2=0.15)
[2025-04-16 16:41:28] 2025-04-16 20:41:15,159 | INFO     | ..............................
[2025-04-16 16:41:28] 2025-04-16 20:41:15,160 | INFO     | . Timing measurements:
[2025-04-16 16:41:28] 2025-04-16 20:41:15,160 | INFO     | . get job = 1 s
[2025-04-16 16:41:28] 2025-04-16 20:41:15,160 | INFO     | . initial setup = 5 s
[2025-04-16 16:41:28] 2025-04-16 20:41:15,160 | INFO     | . payload setup = 40 s
[2025-04-16 16:41:28] 2025-04-16 20:41:15,160 | INFO     | . stage-in = 0 s
[2025-04-16 16:41:28] 2025-04-16 20:41:15,160 | INFO     | . payload execution = 15025 s
[2025-04-16 16:41:28] 2025-04-16 20:41:15,160 | INFO     | . stage-out = 2 s
[2025-04-16 16:41:28] 2025-04-16 20:41:15,160 | INFO     | . log creation = 0 s
[2025-04-16 16:41:28] 2025-04-16 20:41:15,160 | INFO     | ..............................
[2025-04-16 16:41:28] 2025-04-16 20:41:15,247 | INFO     | 
[2025-04-16 16:41:28] 2025-04-16 20:41:15,247 | INFO     | job summary report
[2025-04-16 16:41:28] 2025-04-16 20:41:15,247 | INFO     | --------------------------------------------------
[2025-04-16 16:41:28] 2025-04-16 20:41:15,247 | INFO     | PanDA job id: 6603701373
[2025-04-16 16:41:28] 2025-04-16 20:41:15,247 | INFO     | task id: 44075483
[2025-04-16 16:41:28] 2025-04-16 20:41:15,247 | INFO     | errors: (none)
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | pilot state: finished 
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | transexitcode: 0
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | exeerrorcode: 0
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | exeerrordiag: 
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | exitcode: 0
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | exitmsg: OK
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | cpuconsumptiontime: 42245 s
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | nevents: 400
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | neventsw: 0
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | pid: 771212
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | pgrp: 771212
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | corecount: 9
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | event service: False
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | sizes: {0: 2416538, 1: 2417223, 2: 2417422, 14: 2417422, 25: 2417450, 30: 2417684, 36: 2417840, 15069: 2448407, 15072: 2457348, 15074: 2457404, 15082: 2457574}
[2025-04-16 16:41:28] 2025-04-16 20:41:15,248 | INFO     | --------------------------------------------------
[2025-04-16 16:41:28] 2025-04-16 20:41:15,249 | INFO     | 
[2025-04-16 16:41:28] 2025-04-16 20:41:15,249 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-16 16:41:28] 2025-04-16 20:41:15,270 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,272 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,272 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,272 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-16 16:41:28] 2025-04-16 20:41:15,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,272 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-16 16:41:28] 2025-04-16 20:41:15,272 | INFO     | job 6603701373 has completed (purged errors)
[2025-04-16 16:41:28] 2025-04-16 20:41:15,272 | INFO     | overall cleanup function is called
[2025-04-16 16:41:28] 2025-04-16 20:41:16,035 | INFO     | PID=760636 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-04-16 16:41:28] 2025-04-16 20:41:16,035 | INFO     | .. there are 24 such processes running
[2025-04-16 16:41:28] 2025-04-16 20:41:16,283 | INFO     | --- collectZombieJob: --- 10, [771212]
[2025-04-16 16:41:28] 2025-04-16 20:41:16,283 | INFO     | zombie collector waiting for pid 771212
[2025-04-16 16:41:28] 2025-04-16 20:41:16,283 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-16 16:41:28] 2025-04-16 20:41:16,283 | INFO     | collected zombie processes
[2025-04-16 16:41:28] 2025-04-16 20:41:16,283 | INFO     | will attempt to kill all subprocesses of pid=771212
[2025-04-16 16:41:28] 2025-04-16 20:41:16,641 | INFO     | process IDs to be killed: [771212] (in reverse order)
[2025-04-16 16:41:28] 2025-04-16 20:41:16,748 | WARNING  | found no corresponding commands to process id(s)
[2025-04-16 16:41:28] 2025-04-16 20:41:16,748 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-16 16:41:28] 2025-04-16 20:41:16,762 | INFO     | did not find any defunct processes belonging to 771212
[2025-04-16 16:41:28] 2025-04-16 20:41:16,776 | INFO     | did not find any defunct processes belonging to 771212
[2025-04-16 16:41:28] 2025-04-16 20:41:16,777 | INFO     | ready for new job
[2025-04-16 16:41:28] 2025-04-16 20:41:16,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-16 16:41:28] 2025-04-16 20:41:16,779 | INFO     | **************************************
[2025-04-16 16:41:28] 2025-04-16 20:41:16,779 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-16 16:41:28] 2025-04-16 20:41:16,779 | INFO     | **************************************
[2025-04-16 16:41:28] 2025-04-16 20:41:16,779 | INFO     | 
[2025-04-16 16:41:28] 2025-04-16 20:41:16,798 | INFO     | architecture information:
[2025-04-16 16:41:28] 2025-04-16 20:41:16,799 | INFO     | executing command: cat /etc/os-release
[2025-04-16 16:41:28] 2025-04-16 20:41:16,827 | INFO     | cat /etc/os-release:
[2025-04-16 16:41:28] NAME="CentOS Linux"
[2025-04-16 16:41:28] VERSION="7 (Core)"
[2025-04-16 16:41:28] ID="centos"
[2025-04-16 16:41:28] ID_LIKE="rhel fedora"
[2025-04-16 16:41:28] VERSION_ID="7"
[2025-04-16 16:41:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-16 16:41:28] ANSI_COLOR="0;31"
[2025-04-16 16:41:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-16 16:41:28] HOME_URL="https://www.centos.org/"
[2025-04-16 16:41:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-16 16:41:28] 
[2025-04-16 16:41:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-16 16:41:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-16 16:41:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-16 16:41:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-16 16:41:28] 
[2025-04-16 16:41:28] 2025-04-16 20:41:16,827 | INFO     | **************************************
[2025-04-16 16:41:28] 2025-04-16 20:41:17,331 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-16 16:41:28] 2025-04-16 20:41:17,380 | INFO     | sufficient remaining disk space (75244765184 B)
[2025-04-16 16:41:28] 2025-04-16 20:41:17,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-16 16:41:28] 2025-04-16 20:41:17,381 | INFO     | current server update state: UPDATING_FINAL
[2025-04-16 16:41:28] 2025-04-16 20:41:17,381 | INFO     | update_server=False
[2025-04-16 16:41:28] 2025-04-16 20:41:17,381 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-16 16:41:28] 2025-04-16 20:41:17,381 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-16 16:41:28] 2025-04-16 20:41:17,382 | INFO     | aborting loop
[2025-04-16 16:41:28] 2025-04-16 20:41:17,383 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-16 16:41:28] 2025-04-16 20:41:17,464 | INFO     | all data control threads have been joined
[2025-04-16 16:41:28] 2025-04-16 20:41:17,693 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-16 16:41:28] 2025-04-16 20:41:18,042 | INFO     | found 0 job(s) in 20 queues
[2025-04-16 16:41:28] 2025-04-16 20:41:18,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-16 16:41:28] 2025-04-16 20:41:18,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-16 16:41:28] 2025-04-16 20:41:18,392 | INFO     | [job] retrieve thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:18,393 | INFO     | [job] job monitor thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:18,470 | INFO     | [data] control thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:18,515 | INFO     | all job control threads have been joined
[2025-04-16 16:41:28] 2025-04-16 20:41:18,875 | INFO     | all payload control threads have been joined
[2025-04-16 16:41:28] 2025-04-16 20:41:19,162 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:19,241 | INFO     | [payload] failed_post thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:19,423 | INFO     | [job] validate thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:19,490 | INFO     | [payload] validate_post thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:19,522 | INFO     | [job] control thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:19,573 | INFO     | [payload] validate_pre thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:19,612 | INFO     | [data] copytool_in thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:19,661 | INFO     | [job] create_data_payload thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:19,701 | INFO     | [data] copytool_out thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:19,854 | INFO     | [payload] execute_payloads thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:19,881 | INFO     | [payload] control thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:20,261 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-16 16:41:28] 2025-04-16 20:41:21,276 | INFO     | [job] queue monitor thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:21,399 | INFO     | [data] queue_monitor thread has finished
[2025-04-16 16:41:28] 2025-04-16 20:41:22,307 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140630282848064)>', '<ExcThread(monitor, started 140629937989376)>']
[2025-04-16 16:41:28] 2025-04-16 20:41:23,071 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-16 16:41:28] 2025-04-16 20:41:23,071 | INFO     | [monitor] control thread has ended
[2025-04-16 16:41:28] 2025-04-16 20:41:27,335 | INFO     | all workflow threads have been joined
[2025-04-16 16:41:28] 2025-04-16 20:41:27,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-16 16:41:28] 2025-04-16 20:41:27,335 | INFO     | traces error code: 0
[2025-04-16 16:41:28] 2025-04-16 20:41:27,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-16 16:41:28] 2025-04-16 20:41:27,675 [wrapper] ==== pilot stdout END ====
[2025-04-16 16:41:28] 2025-04-16 20:41:27,690 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-16 16:41:28] 2025-04-16 20:41:27,697 [wrapper] pilotpid: 760636
[2025-04-16 16:41:28] 2025-04-16 20:41:27,703 [wrapper] Pilot exit status: 0
[2025-04-16 16:41:28] 2025-04-16 20:41:27,796 [wrapper] pandaids: 6603701373
[2025-04-16 16:41:28] 2025-04-16 20:41:27,879 [wrapper] cleanup supervisor_pilot 1849329 760637
[2025-04-16 16:41:28] 2025-04-16 20:41:27,883 [wrapper] Test setup, not cleaning
[2025-04-16 16:41:28] 2025-04-16 20:41:27,887 [wrapper] apfmon messages muted
[2025-04-16 16:41:28] 2025-04-16 20:41:27,891 [wrapper] ==== wrapper stdout END ====
[2025-04-16 16:41:28] 2025-04-16 20:41:27,894 [wrapper] ==== wrapper stderr END ====
[2025-04-16 16:41:28]  *** Error codes and diagnostics ***
[2025-04-16 16:41:28]     "exeErrorCode": 0,
[2025-04-16 16:41:28]     "exeErrorDiag": "",
[2025-04-16 16:41:28]     "pilotErrorCode": 0,
[2025-04-16 16:41:28]     "pilotErrorDiag": "",
[2025-04-16 16:41:28]  *** Listing of results directory ***
[2025-04-16 16:41:28] total 418300
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas    495897 Apr 16 01:33 pilot3.tar.gz
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas      5111 Apr 16 01:47 queuedata.json
[2025-04-16 16:41:28] -rwx------. 1 boincer umatlas     37140 Apr 16 01:47 runpilot2-wrapper.sh
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas       100 Apr 16 12:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-16 16:41:28] -rwxr-xr-x. 1 boincer umatlas      7986 Apr 16 12:28 run_atlas
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas       105 Apr 16 12:28 job.xml
[2025-04-16 16:41:28] -rw-r--r--. 2 boincer umatlas 226977985 Apr 16 12:28 EVNT.44075481._001435.pool.root.1
[2025-04-16 16:41:28] -rw-r--r--. 2 boincer umatlas     17569 Apr 16 12:28 start_atlas.sh
[2025-04-16 16:41:28] drwxrwx--x. 2 boincer umatlas      4096 Apr 16 12:28 shared
[2025-04-16 16:41:28] -rw-r--r--. 2 boincer umatlas    508897 Apr 16 12:28 input.tar.gz
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas         0 Apr 16 12:28 boinc_lockfile
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas      2579 Apr 16 12:28 pandaJob.out
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas       467 Apr 16 12:28 setup.sh.local
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas    986568 Apr 16 12:28 agis_schedconf.cvmfs.json
[2025-04-16 16:41:28] drwx------. 4 boincer umatlas      4096 Apr 16 12:28 pilot3
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas 194300667 Apr 16 16:40 HITS.44075483._036530.pool.root.1
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas       531 Apr 16 16:40 boinc_task_state.xml
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas      6840 Apr 16 16:40 init_data.xml
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas        95 Apr 16 16:40 pilot_heartbeat.json
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas      1049 Apr 16 16:40 memory_monitor_summary.json
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas   1603529 Apr 16 16:41 agis_ddmendpoints.agis.ALL.json
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas    406547 Apr 16 16:41 log.44075483._036530.job.log.tgz.1
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas      7736 Apr 16 16:41 heartbeat.json
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas        28 Apr 16 16:41 wrapper_checkpoint.txt
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas      8192 Apr 16 16:41 boinc_mmap_file
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas      4353 Apr 16 16:41 pilotlog.txt
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas   1201875 Apr 16 16:41 log.44075483._036530.job.log.1
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas       357 Apr 16 16:41 output.list
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas       620 Apr 16 16:41 runtime_log
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas   1628160 Apr 16 16:41 result.tar.gz
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas       661 Apr 16 16:41 ug7LDm1nAP7n9Rq4apOajLDm4fhM0noT9bVoFjIUDmhC2KDmhE1dMo.diag
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas     11424 Apr 16 16:41 runtime_log.err
[2025-04-16 16:41:28] -rw-r--r--. 1 boincer umatlas     20935 Apr 16 16:41 stderr.txt
[2025-04-16 16:41:28] HITS file was successfully produced:
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas 194300667 Apr 16 16:40 shared/HITS.pool.root.1
[2025-04-16 16:41:28]  *** Contents of shared directory: ***
[2025-04-16 16:41:28] total 413524
[2025-04-16 16:41:28] -rw-r--r--. 2 boincer umatlas 226977985 Apr 16 12:28 ATLAS.root_0
[2025-04-16 16:41:28] -rw-r--r--. 2 boincer umatlas     17569 Apr 16 12:28 start_atlas.sh
[2025-04-16 16:41:28] -rw-r--r--. 2 boincer umatlas    508897 Apr 16 12:28 input.tar.gz
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas 194300667 Apr 16 16:40 HITS.pool.root.1
[2025-04-16 16:41:28] -rw-------. 1 boincer umatlas   1628160 Apr 16 16:41 result.tar.gz
16:41:30 (756330): run_atlas exited; CPU time 42614.018577
16:41:30 (756330): called boinc_finish(0)

</stderr_txt>
]]>

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