Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:00:05 (3852): wrapper (7.7.26015): starting
10:00:05 (3852): wrapper: running run_atlas (--nthreads 10)
[2025-04-16 10:00:06] Arguments: --nthreads 10
[2025-04-16 10:00:06] Threads: 10
[2025-04-16 10:00:06] Checking for CVMFS
[2025-04-16 10:00:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 10:00:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 10:00:07] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 10:00:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 10:00:08] 2.11.2.0 4919 202324 373036 144925 2 306 14045248 18432001 8622 130560 0 35097053 99.429 53150497 44154 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-16 10:00:08] CVMFS is ok
[2025-04-16 10:00:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 10:00:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 10:00:08] Further information can be found at the LHC@home message board.
[2025-04-16 10:00:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 10:00:08] Checking for apptainer binary...
[2025-04-16 10:00:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 10:00:08] Running /usr/bin/apptainer --version
[2025-04-16 10:00:08] apptainer version 1.3.2-1.el7
[2025-04-16 10:00:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 10:00:17] c-211-32.aglt2.org
[2025-04-16 10:00:17] apptainer works
[2025-04-16 10:00:17] Set ATHENA_PROC_NUMBER=10
[2025-04-16 10:00:17] Set ATHENA_CORE_NUMBER=10
[2025-04-16 10:00:17] Starting ATLAS job with PandaID=6603900367
[2025-04-16 10:00:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:00:02 (3852): BOINC client no longer exists - exiting
15:00:02 (3852): timer handler: client dead, exiting
15:13:19 (10915): wrapper (7.7.26015): starting
15:13:19 (10915): wrapper: running run_atlas (--nthreads 10)
[2025-04-16 15:13:19] Arguments: --nthreads 10
[2025-04-16 15:13:19] Threads: 10
[2025-04-16 15:13:19] This job has been restarted, cleaning up previous attempt
[2025-04-16 15:13:19] Checking for CVMFS
[2025-04-16 15:13:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-04-16 15:13:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-04-16 15:13:22] Running cvmfs_config stat atlas.cern.ch
[2025-04-16 15:13:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-04-16 15:13:22] 2.11.2.0 4919 202637 370932 144935 2 183 15859295 18432001 8448 130560 0 35603961 99.422 53765328 44143 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-04-16 15:13:22] CVMFS is ok
[2025-04-16 15:13:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-04-16 15:13:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-04-16 15:13:22] Further information can be found at the LHC@home message board.
[2025-04-16 15:13:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-04-16 15:13:22] Checking for apptainer binary...
[2025-04-16 15:13:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-04-16 15:13:22] Running /usr/bin/apptainer --version
[2025-04-16 15:13:22] apptainer version 1.3.2-1.el7
[2025-04-16 15:13:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-04-16 15:13:33] c-211-32.aglt2.org
[2025-04-16 15:13:33] apptainer works
[2025-04-16 15:13:33] Set ATHENA_PROC_NUMBER=10
[2025-04-16 15:13:33] Set ATHENA_CORE_NUMBER=10
[2025-04-16 15:13:34] Starting ATLAS job with PandaID=6603900367
[2025-04-16 15:13:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-04-17 04:42:41]  *** The last 200 lines of the pilot log: ***
[2025-04-17 04:42:41] 2025-04-17 08:42:26,005 | INFO     | sum of square deviations: 152878444557.47983
[2025-04-17 04:42:41] 2025-04-17 08:42:26,022 | INFO     | sum of deviations: 783776772025.6826
[2025-04-17 04:42:41] 2025-04-17 08:42:26,022 | INFO     | mean x: 1744855259.5050633
[2025-04-17 04:42:41] 2025-04-17 08:42:26,022 | INFO     | mean y: 2528266.45443038
[2025-04-17 04:42:41] 2025-04-17 08:42:26,022 | INFO     | -- intersect: -8942990684.274601
[2025-04-17 04:42:41] 2025-04-17 08:42:26,023 | INFO     | intersect: -8942990684.274601
[2025-04-17 04:42:41] 2025-04-17 08:42:26,024 | INFO     | chi2: 7.910314186869777
[2025-04-17 04:42:41] 2025-04-17 08:42:26,025 | INFO     | sum of square deviations: 149994176824.897
[2025-04-17 04:42:41] 2025-04-17 08:42:26,041 | INFO     | sum of deviations: 832254812072.3152
[2025-04-17 04:42:41] 2025-04-17 08:42:26,042 | INFO     | mean x: 1744855107.011465
[2025-04-17 04:42:41] 2025-04-17 08:42:26,042 | INFO     | mean y: 2530814.742675159
[2025-04-17 04:42:41] 2025-04-17 08:42:26,042 | INFO     | -- intersect: -9678938759.069517
[2025-04-17 04:42:41] 2025-04-17 08:42:26,042 | INFO     | intersect: -9678938759.069517
[2025-04-17 04:42:41] 2025-04-17 08:42:26,043 | INFO     | chi2: 7.140063372618717
[2025-04-17 04:42:41] 2025-04-17 08:42:26,043 | INFO     | current chi2=7.140063372618717 (change=9.737297357032785 %)
[2025-04-17 04:42:41] 2025-04-17 08:42:26,044 | INFO     | right removable region: 784
[2025-04-17 04:42:41] 2025-04-17 08:42:26,045 | INFO     | sum of square deviations: 149993692484.89694
[2025-04-17 04:42:41] 2025-04-17 08:42:26,063 | INFO     | sum of deviations: 532423041849.1759
[2025-04-17 04:42:41] 2025-04-17 08:42:26,063 | INFO     | mean x: 1744855412.011465
[2025-04-17 04:42:41] 2025-04-17 08:42:26,063 | INFO     | mean y: 2541546.647133758
[2025-04-17 04:42:41] 2025-04-17 08:42:26,063 | INFO     | -- intersect: -6191060401.939362
[2025-04-17 04:42:41] 2025-04-17 08:42:26,063 | INFO     | intersect: -6191060401.939362
[2025-04-17 04:42:41] 2025-04-17 08:42:26,064 | INFO     | chi2: 4.277271507635533
[2025-04-17 04:42:41] 2025-04-17 08:42:26,065 | INFO     | current chi2=4.277271507635533 (change=45.92791883367517 %)
[2025-04-17 04:42:41] 2025-04-17 08:42:26,066 | INFO     | sum of square deviations: 147145500488.7834
[2025-04-17 04:42:41] 2025-04-17 08:42:26,080 | INFO     | sum of deviations: 355588859468.86694
[2025-04-17 04:42:41] 2025-04-17 08:42:26,081 | INFO     | mean x: 1744855564.5166667
[2025-04-17 04:42:41] 2025-04-17 08:42:26,081 | INFO     | mean y: 2551013.8564102566
[2025-04-17 04:42:41] 2025-04-17 08:42:26,081 | INFO     | -- intersect: -4214031879.017594
[2025-04-17 04:42:41] 2025-04-17 08:42:26,081 | INFO     | intersect: -4214031879.017594
[2025-04-17 04:42:41] 2025-04-17 08:42:26,082 | INFO     | chi2: 2.5918033727095158
[2025-04-17 04:42:41] 2025-04-17 08:42:26,083 | INFO     | current chi2=2.5918033727095158 (change=39.40521736619289 %)
[2025-04-17 04:42:41] 2025-04-17 08:42:26,084 | INFO     | sum of square deviations: 144333635701.6704
[2025-04-17 04:42:41] 2025-04-17 08:42:26,099 | INFO     | sum of deviations: 196878260456.8078
[2025-04-17 04:42:41] 2025-04-17 08:42:26,100 | INFO     | mean x: 1744855717.0206451
[2025-04-17 04:42:41] 2025-04-17 08:42:26,100 | INFO     | mean y: 2559618.824516129
[2025-04-17 04:42:41] 2025-04-17 08:42:26,100 | INFO     | -- intersect: -2377510394.967598
[2025-04-17 04:42:41] 2025-04-17 08:42:26,100 | INFO     | intersect: -2377510394.967598
[2025-04-17 04:42:41] 2025-04-17 08:42:26,101 | INFO     | chi2: 1.2248975988523134
[2025-04-17 04:42:41] 2025-04-17 08:42:26,101 | INFO     | current chi2=1.2248975988523134 (change=52.739563049036995 %)
[2025-04-17 04:42:41] 2025-04-17 08:42:26,102 | INFO     | sum of square deviations: 141557818590.0321
[2025-04-17 04:42:41] 2025-04-17 08:42:26,118 | INFO     | sum of deviations: 125543825522.52463
[2025-04-17 04:42:41] 2025-04-17 08:42:26,118 | INFO     | mean x: 1744855869.5246754
[2025-04-17 04:42:41] 2025-04-17 08:42:26,118 | INFO     | mean y: 2563535.4987012986
[2025-04-17 04:42:41] 2025-04-17 08:42:26,119 | INFO     | -- intersect: -1544902249.3476315
[2025-04-17 04:42:41] 2025-04-17 08:42:26,119 | INFO     | intersect: -1544902249.3476315
[2025-04-17 04:42:41] 2025-04-17 08:42:26,120 | INFO     | chi2: 0.9560331312641657
[2025-04-17 04:42:41] 2025-04-17 08:42:26,120 | INFO     | current chi2=0.9560331312641657 (change=21.94995466070506 %)
[2025-04-17 04:42:41] 2025-04-17 08:42:26,120 | INFO     | left removable region: 40
[2025-04-17 04:42:41] 2025-04-17 08:42:26,121 | INFO     | sum of square deviations: 127696850247.4076
[2025-04-17 04:42:41] 2025-04-17 08:42:26,135 | INFO     | sum of deviations: 109630501554.12476
[2025-04-17 04:42:41] 2025-04-17 08:42:26,135 | INFO     | mean x: 1744856296.528226
[2025-04-17 04:42:41] 2025-04-17 08:42:26,135 | INFO     | mean y: 2570143.875
[2025-04-17 04:42:41] 2025-04-17 08:42:26,136 | INFO     | -- intersect: -1495426639.5824327
[2025-04-17 04:42:41] 2025-04-17 08:42:26,136 | INFO     | intersect: -1495426639.5824327
[2025-04-17 04:42:41] 2025-04-17 08:42:26,137 | INFO     | chi2: 0.030054862823416167
[2025-04-17 04:42:41] 2025-04-17 08:42:26,137 | INFO     | -- intersect: -1495426639.5824327
[2025-04-17 04:42:41] 2025-04-17 08:42:26,137 | INFO     | current memory leak: 0.86 B/s (using 744 data points, chi2=0.03)
[2025-04-17 04:42:41] 2025-04-17 08:42:26,138 | INFO     | ..............................
[2025-04-17 04:42:41] 2025-04-17 08:42:26,138 | INFO     | . Timing measurements:
[2025-04-17 04:42:41] 2025-04-17 08:42:26,139 | INFO     | . get job = 0 s
[2025-04-17 04:42:41] 2025-04-17 08:42:26,139 | INFO     | . initial setup = 8 s
[2025-04-17 04:42:41] 2025-04-17 08:42:26,139 | INFO     | . payload setup = 61 s
[2025-04-17 04:42:41] 2025-04-17 08:42:26,139 | INFO     | . stage-in = 0 s
[2025-04-17 04:42:41] 2025-04-17 08:42:26,139 | INFO     | . payload execution = 48240 s
[2025-04-17 04:42:41] 2025-04-17 08:42:26,139 | INFO     | . stage-out = 2 s
[2025-04-17 04:42:41] 2025-04-17 08:42:26,139 | INFO     | . log creation = 0 s
[2025-04-17 04:42:41] 2025-04-17 08:42:26,139 | INFO     | ..............................
[2025-04-17 04:42:41] 2025-04-17 08:42:26,284 | INFO     | 
[2025-04-17 04:42:41] 2025-04-17 08:42:26,284 | INFO     | job summary report
[2025-04-17 04:42:41] 2025-04-17 08:42:26,284 | INFO     | --------------------------------------------------
[2025-04-17 04:42:41] 2025-04-17 08:42:26,284 | INFO     | PanDA job id: 6603900367
[2025-04-17 04:42:41] 2025-04-17 08:42:26,285 | INFO     | task id: 44075483
[2025-04-17 04:42:41] 2025-04-17 08:42:26,285 | INFO     | errors: (none)
[2025-04-17 04:42:41] 2025-04-17 08:42:26,285 | INFO     | status: LOG_TRANSFER = DONE 
[2025-04-17 04:42:41] 2025-04-17 08:42:26,285 | INFO     | pilot state: finished 
[2025-04-17 04:42:41] 2025-04-17 08:42:26,285 | INFO     | transexitcode: 0
[2025-04-17 04:42:41] 2025-04-17 08:42:26,285 | INFO     | exeerrorcode: 0
[2025-04-17 04:42:41] 2025-04-17 08:42:26,285 | INFO     | exeerrordiag: 
[2025-04-17 04:42:41] 2025-04-17 08:42:26,286 | INFO     | exitcode: 0
[2025-04-17 04:42:41] 2025-04-17 08:42:26,286 | INFO     | exitmsg: OK
[2025-04-17 04:42:41] 2025-04-17 08:42:26,286 | INFO     | cpuconsumptiontime: 86937 s
[2025-04-17 04:42:41] 2025-04-17 08:42:26,286 | INFO     | nevents: 400
[2025-04-17 04:42:41] 2025-04-17 08:42:26,286 | INFO     | neventsw: 0
[2025-04-17 04:42:41] 2025-04-17 08:42:26,286 | INFO     | pid: 32618
[2025-04-17 04:42:41] 2025-04-17 08:42:26,286 | INFO     | pgrp: 32618
[2025-04-17 04:42:41] 2025-04-17 08:42:26,286 | INFO     | corecount: 10
[2025-04-17 04:42:41] 2025-04-17 08:42:26,287 | INFO     | event service: False
[2025-04-17 04:42:41] 2025-04-17 08:42:26,287 | INFO     | sizes: {0: 2417195, 1: 2417394, 12: 2417394, 24: 2417422, 35: 2417450, 46: 2417840, 57: 2417840, 48305: 2462438, 48306: 2462437, 48308: 2480948, 48318: 2481062}
[2025-04-17 04:42:41] 2025-04-17 08:42:26,287 | INFO     | --------------------------------------------------
[2025-04-17 04:42:41] 2025-04-17 08:42:26,287 | INFO     | 
[2025-04-17 04:42:41] 2025-04-17 08:42:26,287 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-04-17 04:42:41] 2025-04-17 08:42:26,377 | INFO     | queue jobs had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,378 | INFO     | queue payloads had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,378 | INFO     | queue data_in had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,378 | INFO     | queue data_out had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,378 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,379 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,379 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,379 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,379 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,379 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,380 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,380 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,380 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,380 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,380 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,380 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,381 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,381 | INFO     | queue completed_jobids has 1 job(s)
[2025-04-17 04:42:41] 2025-04-17 08:42:26,381 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,381 | INFO     | queue messages had 0 job(s) [purged]
[2025-04-17 04:42:41] 2025-04-17 08:42:26,381 | INFO     | job 6603900367 has completed (purged errors)
[2025-04-17 04:42:41] 2025-04-17 08:42:26,382 | INFO     | overall cleanup function is called
[2025-04-17 04:42:41] 2025-04-17 08:42:27,392 | INFO     | --- collectZombieJob: --- 10, [32618]
[2025-04-17 04:42:41] 2025-04-17 08:42:27,392 | INFO     | zombie collector waiting for pid 32618
[2025-04-17 04:42:41] 2025-04-17 08:42:27,392 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-04-17 04:42:41] 2025-04-17 08:42:27,392 | INFO     | collected zombie processes
[2025-04-17 04:42:41] 2025-04-17 08:42:27,393 | INFO     | will attempt to kill all subprocesses of pid=32618
[2025-04-17 04:42:41] 2025-04-17 08:42:27,654 | INFO     | process IDs to be killed: [32618] (in reverse order)
[2025-04-17 04:42:41] 2025-04-17 08:42:27,907 | WARNING  | found no corresponding commands to process id(s)
[2025-04-17 04:42:41] 2025-04-17 08:42:27,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-04-17 04:42:41] 2025-04-17 08:42:27,915 | INFO     | did not find any defunct processes belonging to 32618
[2025-04-17 04:42:41] 2025-04-17 08:42:27,922 | INFO     | did not find any defunct processes belonging to 32618
[2025-04-17 04:42:41] 2025-04-17 08:42:27,922 | INFO     | ready for new job
[2025-04-17 04:42:41] 2025-04-17 08:42:27,922 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-04-17 04:42:41] 2025-04-17 08:42:27,926 | INFO     | **************************************
[2025-04-17 04:42:41] 2025-04-17 08:42:27,926 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-04-17 04:42:41] 2025-04-17 08:42:27,926 | INFO     | **************************************
[2025-04-17 04:42:41] 2025-04-17 08:42:27,926 | INFO     | 
[2025-04-17 04:42:41] 2025-04-17 08:42:27,928 | INFO     | architecture information:
[2025-04-17 04:42:41] 2025-04-17 08:42:27,929 | INFO     | executing command: cat /etc/os-release
[2025-04-17 04:42:41] 2025-04-17 08:42:28,010 | INFO     | cat /etc/os-release:
[2025-04-17 04:42:41] NAME="CentOS Linux"
[2025-04-17 04:42:41] VERSION="7 (Core)"
[2025-04-17 04:42:41] ID="centos"
[2025-04-17 04:42:41] ID_LIKE="rhel fedora"
[2025-04-17 04:42:41] VERSION_ID="7"
[2025-04-17 04:42:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-04-17 04:42:41] ANSI_COLOR="0;31"
[2025-04-17 04:42:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-04-17 04:42:41] HOME_URL="https://www.centos.org/"
[2025-04-17 04:42:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-04-17 04:42:41] 
[2025-04-17 04:42:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-04-17 04:42:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-04-17 04:42:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-04-17 04:42:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-04-17 04:42:41] 
[2025-04-17 04:42:41] 2025-04-17 08:42:28,010 | INFO     | **************************************
[2025-04-17 04:42:41] 2025-04-17 08:42:28,516 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-04-17 04:42:41] 2025-04-17 08:42:28,540 | INFO     | sufficient remaining disk space (56958648320 B)
[2025-04-17 04:42:41] 2025-04-17 08:42:28,541 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-04-17 04:42:41] 2025-04-17 08:42:28,541 | INFO     | current server update state: UPDATING_FINAL
[2025-04-17 04:42:41] 2025-04-17 08:42:28,541 | INFO     | update_server=False
[2025-04-17 04:42:41] 2025-04-17 08:42:28,541 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-04-17 04:42:41] 2025-04-17 08:42:28,542 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-04-17 04:42:41] 2025-04-17 08:42:28,542 | INFO     | aborting loop
[2025-04-17 04:42:41] 2025-04-17 08:42:29,030 | INFO     | all job control threads have been joined
[2025-04-17 04:42:41] 2025-04-17 08:42:29,060 | INFO     | found 0 job(s) in 20 queues
[2025-04-17 04:42:41] 2025-04-17 08:42:29,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-04-17 04:42:41] 2025-04-17 08:42:29,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-04-17 04:42:41] 2025-04-17 08:42:29,079 | INFO     | all data control threads have been joined
[2025-04-17 04:42:41] 2025-04-17 08:42:29,448 | INFO     | all payload control threads have been joined
[2025-04-17 04:42:41] 2025-04-17 08:42:29,548 | INFO     | [job] retrieve thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:29,558 | INFO     | [job] job monitor thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:29,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-04-17 04:42:41] 2025-04-17 08:42:30,003 | INFO     | [payload] validate_pre thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:30,035 | INFO     | [job] control thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:30,084 | INFO     | [data] control thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:30,097 | INFO     | [job] validate thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:30,130 | INFO     | [data] copytool_in thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:30,132 | INFO     | [job] create_data_payload thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:30,375 | INFO     | [payload] failed_post thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:30,454 | INFO     | [payload] control thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:30,623 | INFO     | [payload] run_realtimelog thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:30,875 | INFO     | [payload] validate_post thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:30,982 | INFO     | [payload] execute_payloads thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:31,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-04-17 04:42:41] 2025-04-17 08:42:31,583 | INFO     | [data] copytool_out thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:31,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-04-17 04:42:41] 2025-04-17 08:42:32,300 | INFO     | [job] queue monitor thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:35,724 | INFO     | [data] queue_monitor thread has finished
[2025-04-17 04:42:41] 2025-04-17 08:42:36,115 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139794064774976)>', '<ExcThread(monitor, started 139793333745408)>']
[2025-04-17 04:42:41] 2025-04-17 08:42:37,103 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-04-17 04:42:41] 2025-04-17 08:42:37,103 | INFO     | [monitor] control thread has ended
[2025-04-17 04:42:41] 2025-04-17 08:42:41,140 | INFO     | all workflow threads have been joined
[2025-04-17 04:42:41] 2025-04-17 08:42:41,140 | INFO     | end of generic workflow (traces error code: 0)
[2025-04-17 04:42:41] 2025-04-17 08:42:41,140 | INFO     | traces error code: 0
[2025-04-17 04:42:41] 2025-04-17 08:42:41,140 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-04-17 04:42:41] 2025-04-17 08:42:41,307 [wrapper] ==== pilot stdout END ====
[2025-04-17 04:42:41] 2025-04-17 08:42:41,310 [wrapper] ==== wrapper stdout RESUME ====
[2025-04-17 04:42:41] 2025-04-17 08:42:41,316 [wrapper] pilotpid: 18812
[2025-04-17 04:42:41] 2025-04-17 08:42:41,338 [wrapper] Pilot exit status: 0
[2025-04-17 04:42:41] 2025-04-17 08:42:41,371 [wrapper] pandaids: 6603900367 6603900367
[2025-04-17 04:42:41] 2025-04-17 08:42:41,423 [wrapper] cleanup supervisor_pilot 21250 18813
[2025-04-17 04:42:41] 2025-04-17 08:42:41,426 [wrapper] Test setup, not cleaning
[2025-04-17 04:42:41] 2025-04-17 08:42:41,429 [wrapper] apfmon messages muted
[2025-04-17 04:42:41] 2025-04-17 08:42:41,431 [wrapper] ==== wrapper stdout END ====
[2025-04-17 04:42:41] 2025-04-17 08:42:41,434 [wrapper] ==== wrapper stderr END ====
[2025-04-17 04:42:41]  *** Error codes and diagnostics ***
[2025-04-17 04:42:41]     "exeErrorCode": 0,
[2025-04-17 04:42:41]     "exeErrorDiag": "",
[2025-04-17 04:42:41]     "pilotErrorCode": 0,
[2025-04-17 04:42:41]     "pilotErrorDiag": "",
[2025-04-17 04:42:41]  *** Listing of results directory ***
[2025-04-17 04:42:41] total 642268
[2025-04-17 04:42:41] drwx------ 4 boincer umatlas      4096 Apr  3 04:00 pilot3
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas    495897 Apr 16 06:41 pilot3.tar.gz
[2025-04-17 04:42:41] -rwx------ 1 boincer umatlas     37140 Apr 16 06:41 runpilot2-wrapper.sh
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas      5111 Apr 16 06:41 queuedata.json
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas       100 Apr 16 10:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-04-17 04:42:41] -rwxr-xr-x 1 boincer umatlas      7986 Apr 16 10:00 run_atlas
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas       105 Apr 16 10:00 job.xml
[2025-04-17 04:42:41] -rw-r--r-- 3 boincer umatlas 224592188 Apr 16 10:00 EVNT.44075481._001548.pool.root.1
[2025-04-17 04:42:41] -rw-r--r-- 3 boincer umatlas 224592188 Apr 16 10:00 ATLAS.root_0
[2025-04-17 04:42:41] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 10:00 start_atlas.sh
[2025-04-17 04:42:41] drwxrwx--x 2 boincer umatlas      4096 Apr 16 10:00 shared
[2025-04-17 04:42:41] -rw-r--r-- 2 boincer umatlas    508884 Apr 16 10:00 input.tar.gz
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas         0 Apr 16 10:00 boinc_lockfile
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas      2579 Apr 16 15:13 pandaJob.out
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas       467 Apr 16 15:13 setup.sh.local
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas    986552 Apr 16 15:15 agis_schedconf.cvmfs.json
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas      6037 Apr 17 04:40 init_data.xml
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas 195824222 Apr 17 04:41 HITS.44075483._039471.pool.root.1
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas       532 Apr 17 04:41 boinc_task_state.xml
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas        96 Apr 17 04:41 pilot_heartbeat.json
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas      1054 Apr 17 04:42 memory_monitor_summary.json
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas   1618536 Apr 17 04:42 agis_ddmendpoints.agis.ALL.json
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas    711667 Apr 17 04:42 log.44075483._039471.job.log.tgz.1
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas      7746 Apr 17 04:42 heartbeat.json
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas      8192 Apr 17 04:42 boinc_mmap_file
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas        29 Apr 17 04:42 wrapper_checkpoint.txt
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas      4353 Apr 17 04:42 pilotlog.txt
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas   3698153 Apr 17 04:42 log.44075483._039471.job.log.1
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas       357 Apr 17 04:42 output.list
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas       620 Apr 17 04:42 runtime_log
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas   4423680 Apr 17 04:42 result.tar.gz
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas     11506 Apr 17 04:42 runtime_log.err
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas       790 Apr 17 04:42 OGyLDmBOFP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmbAaLDmqGvClm.diag
[2025-04-17 04:42:41] -rw-r--r-- 1 boincer umatlas     23084 Apr 17 04:42 stderr.txt
[2025-04-17 04:42:41] HITS file was successfully produced:
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas 195824222 Apr 17 04:41 shared/HITS.pool.root.1
[2025-04-17 04:42:41]  *** Contents of shared directory: ***
[2025-04-17 04:42:41] total 415412
[2025-04-17 04:42:41] -rw-r--r-- 3 boincer umatlas 224592188 Apr 16 10:00 ATLAS.root_0
[2025-04-17 04:42:41] -rw-r--r-- 2 boincer umatlas     17569 Apr 16 10:00 start_atlas.sh
[2025-04-17 04:42:41] -rw-r--r-- 2 boincer umatlas    508884 Apr 16 10:00 input.tar.gz
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas 195824222 Apr 17 04:41 HITS.pool.root.1
[2025-04-17 04:42:41] -rw------- 1 boincer umatlas   4423680 Apr 17 04:42 result.tar.gz
04:42:43 (10915): run_atlas exited; CPU time 88103.663659
04:42:43 (10915): called boinc_finish(0)

</stderr_txt>
]]>

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