Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-04-19 04:56:00 (8440): Detected: vboxwrapper 26206
2025-04-19 04:56:00 (8440): Detected: BOINC client v8.0.2
2025-04-19 04:56:01 (8440): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-04-19 04:56:01 (8440): Detected: Sandbox Configuration Enabled
2025-04-19 04:56:02 (8440): Successfully copied 'init_data.xml' to the shared directory.
2025-04-19 04:56:03 (8440): Create VM. (boinc_7d05b076755123be, slot#0)
2025-04-19 04:56:04 (8440): Setting Memory Size for VM. (4400MB)
2025-04-19 04:56:04 (8440): Setting CPU Count for VM. (4)
2025-04-19 04:56:05 (8440): Setting Chipset Options for VM.
2025-04-19 04:56:06 (8440): Setting Graphics Controller Options for VM.
2025-04-19 04:56:06 (8440): Setting Boot Options for VM.
2025-04-19 04:56:07 (8440): Setting Network Configuration for NAT.
2025-04-19 04:56:07 (8440): Enabling VM Network Access.
2025-04-19 04:56:08 (8440): Disabling USB Support for VM.
2025-04-19 04:56:09 (8440): Disabling COM Port Support for VM.
2025-04-19 04:56:09 (8440): Disabling Audio Support for VM.
2025-04-19 04:56:10 (8440): Disabling Clipboard Support for VM.
2025-04-19 04:56:10 (8440): Disabling Drag and Drop Support for VM.
2025-04-19 04:56:11 (8440): Adding storage controller(s) to VM.
2025-04-19 04:56:11 (8440): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2025-04-19 04:56:16 (8440): Adding VirtualBox Guest Additions to VM.
2025-04-19 04:56:17 (8440): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-04-19 04:56:17 (8440): forwarding host port 51552 to guest port 80
2025-04-19 04:56:18 (8440): Enabling remote desktop for VM.
2025-04-19 04:56:19 (8440): Required extension pack not installed, remote desktop not enabled.
2025-04-19 04:56:19 (8440): Enabling shared directory for VM.
2025-04-19 04:56:20 (8440): Starting VM using VBoxManage interface. (boinc_7d05b076755123be, slot#0)
2025-04-19 04:56:26 (8440): Successfully started VM. (PID = '8524')
2025-04-19 04:56:26 (8440): Reporting VM Process ID to BOINC.
2025-04-19 04:56:26 (8440): Guest Log: BIOS: VirtualBox 7.1.6
2025-04-19 04:56:26 (8440): Guest Log: CPUID EDX: 0x178bfbff
2025-04-19 04:56:26 (8440): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-04-19 04:56:26 (8440): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-04-19 04:56:26 (8440): VM state change detected. (old = 'poweredoff', new = 'running')
2025-04-19 04:56:26 (8440): Detected: Web Application Enabled (http://localhost:51552)
2025-04-19 04:56:26 (8440): Preference change detected
2025-04-19 04:56:26 (8440): Setting CPU throttle for VM. (100%)
2025-04-19 04:56:26 (8440): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-04-19 04:56:28 (8440): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-04-19 04:56:28 (8440): Guest Log: BIOS: Booting from Hard Disk...
2025-04-19 04:56:31 (8440): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-04-19 04:56:31 (8440): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-04-19 04:56:31 (8440): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-04-19 04:56:41 (8440): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-04-19 04:56:41 (8440): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-04-19 04:56:57 (8440): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-04-19 04:56:57 (8440): Guest Log: 00:00:00.000309 main     Log opened 2025-04-18T18:56:55.038470000Z
2025-04-19 04:56:57 (8440): Guest Log: 00:00:00.000578 main     OS Product: Linux
2025-04-19 04:56:57 (8440): Guest Log: 00:00:00.000682 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-04-19 04:56:57 (8440): Guest Log: 00:00:00.000762 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-04-19 04:56:57 (8440): Guest Log: 00:00:00.000856 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-04-19 04:56:57 (8440): Guest Log: 00:00:00.000859 main     Process ID: 1315
2025-04-19 04:56:57 (8440): Guest Log: 00:00:00.000860 main     Package type: LINUX_64BITS_GENERIC
2025-04-19 04:56:57 (8440): Guest Log: 00:00:00.004848 main     5.2.32 r132073 started. Verbose level = 0
2025-04-19 04:56:57 (8440): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-04-19 04:56:57 (8440): Guest Log: [INFO] Mounting shared directory
2025-04-19 04:56:57 (8440): Guest Log: [INFO] Checking for init_data.xml
2025-04-19 04:57:12 (8440): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-04-19 04:57:12 (8440): Guest Log: [INFO] Detected branch: prod
2025-04-19 04:57:14 (8440): Guest Log: This is the prod version of the ATLAS job wrapper
2025-04-19 04:57:14 (8440): Guest Log: Copying input files
2025-04-19 04:57:19 (8440): Guest Log: Copied input files into RunAtlas.
2025-04-19 04:57:19 (8440): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-04-19 04:57:19 (8440): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-04-19 04:57:19 (8440): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-04-19 04:57:19 (8440): Guest Log: Further information can be found at the LHC@home message board.
2025-04-19 04:57:34 (8440): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-04-19 04:57:36 (8440): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-04-19 04:57:36 (8440): Guest Log: 2.6.3.0 1610 0 32028 145012 4 1 3117322 4096000 0 65024 0 0 n/a 0 0 http://s1swinburne-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-04-19 04:57:37 (8440): Guest Log: copied the webapp to /var/www
2025-04-19 04:57:37 (8440): Guest Log: ATHENA_PROC_NUMBER=4
2025-04-19 04:57:37 (8440): Guest Log: ATHENA_CORE_NUMBER=4
2025-04-19 04:57:40 (8440): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-04-19 04:57:40 (8440): Guest Log:  *** Starting ATLAS job. (PandaID=6603702650 taskID=44075483) ***
2025-04-19 06:36:39 (8440): Status Report: Elapsed Time: '6000.252002'
2025-04-19 06:36:39 (8440): Status Report: CPU Time: '15388.090000'
2025-04-19 08:17:00 (8440): Status Report: Elapsed Time: '12000.549914'
2025-04-19 08:17:00 (8440): Status Report: CPU Time: '38077.160000'
2025-04-19 08:51:16 (8440): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 08:54:17 (8440): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 09:14:28 (8440): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 09:17:32 (8440): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 09:27:04 (8440): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 09:30:19 (8440): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 09:39:41 (8440): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 09:44:35 (8440): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 10:11:32 (8440): Status Report: Elapsed Time: '18000.932397'
2025-04-19 10:11:32 (8440): Status Report: CPU Time: '61300.430000'
2025-04-19 10:22:31 (8440): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 10:25:29 (8440): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 10:44:56 (8440): VM state change detected. (old = 'running', new = 'paused')
2025-04-19 10:47:54 (8440): VM state change detected. (old = 'paused', new = 'running')
2025-04-19 11:57:50 (8440): Status Report: Elapsed Time: '24001.600240'
2025-04-19 11:57:50 (8440): Status Report: CPU Time: '83178.520000'
2025-04-19 12:58:31 (8440): Guest Log:  *** Job finished ***
2025-04-19 12:58:31 (8440): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:03,577 | INFO     | [data] copytool_out thread has finished
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:04,269 | INFO     | [job] queue monitor thread has finished
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:06,847 | INFO     | [data] queue_monitor thread has finished
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:08,373 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140060518274880)>', '<ExcThread(monitor, started 140059915298560)>']
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:09,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:09,373 | INFO     | [monitor] control thread has ended
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:13,378 | INFO     | all workflow threads have been joined
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:13,378 | INFO     | end of generic workflow (traces error code: 0)
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:13,379 | INFO     | traces error code: 0
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:13,379 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:13,535 [wrapper] ==== pilot stdout END ====
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:13,557 [wrapper] ==== wrapper stdout RESUME ====
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:13,578 [wrapper] pilotpid: 6017
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:13,594 [wrapper] Pilot exit status: 0
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:16,716 [wrapper] pandaids: 6603702650
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:16,854 [wrapper] cleanup supervisor_pilot 25830 6018
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:16,869 [wrapper] Test setup, not cleaning
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:16,888 [wrapper] apfmon messages muted
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:16,908 [wrapper] ==== wrapper stdout END ====
2025-04-19 12:58:31 (8440): Guest Log: 2025-04-19 02:58:16,922 [wrapper] ==== wrapper stderr END ====
2025-04-19 12:58:31 (8440): Guest Log:  *** Error codes and diagnostics ***
2025-04-19 12:58:31 (8440): Guest Log:     "exeErrorCode": 0,
2025-04-19 12:58:31 (8440): Guest Log:     "exeErrorDiag": "",
2025-04-19 12:58:31 (8440): Guest Log:     "pilotErrorCode": 0,
2025-04-19 12:58:31 (8440): Guest Log:     "pilotErrorDiag": "",
2025-04-19 12:58:31 (8440): Guest Log:  *** Listing of results directory ***
2025-04-19 12:58:31 (8440): Guest Log: total 195336
2025-04-19 12:58:31 (8440): Guest Log: -rw-r--r--. 1 atlas atlas    495897 Apr 16 07:44 pilot3.tar.gz
2025-04-19 12:58:31 (8440): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Apr 16 07:57 queuedata.json
2025-04-19 12:58:31 (8440): Guest Log: -rwx------. 1 atlas atlas     37140 Apr 16 07:58 runpilot2-wrapper.sh
2025-04-19 12:58:31 (8440): Guest Log: -rw-r-----. 1 atlas atlas     17569 Apr 18 18:57 start_atlas.sh
2025-04-19 12:58:31 (8440): Guest Log: -rw-r-----. 1 atlas atlas    508897 Apr 18 18:57 input.tar.gz
2025-04-19 12:58:31 (8440): Guest Log: -rw-r--r--. 1 atlas atlas      6164 Apr 18 18:57 init_data.xml
2025-04-19 12:58:31 (8440): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Apr 18 18:57 EVNT.44075481._001483.pool.root.1 -> /data/./ATLAS.root_0
2025-04-19 12:58:31 (8440): Guest Log: -rw-r--r--. 1 atlas atlas      2578 Apr 18 18:57 pandaJob.out
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas       424 Apr 18 18:58 setup.sh.local
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas    991292 Apr 18 19:05 agis_schedconf.cvmfs.json
2025-04-19 12:58:31 (8440): Guest Log: drwx------. 4 atlas atlas      4096 Apr 18 19:05 pilot3
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas 192189314 Apr 19 02:56 HITS.44075483._037743.pool.root.1
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas      1031 Apr 19 02:57 memory_monitor_summary.json
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas   1618536 Apr 19 02:57 agis_ddmendpoints.agis.ALL.json
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas    399770 Apr 19 02:57 log.44075483._037743.job.log.tgz.1
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas        97 Apr 19 02:57 pilot_heartbeat.json
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas      7703 Apr 19 02:57 heartbeat.json
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas      4536 Apr 19 02:58 pilotlog.txt
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas   1617010 Apr 19 02:58 log.44075483._037743.job.log.1
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas       357 Apr 19 02:58 output.list
2025-04-19 12:58:31 (8440): Guest Log: -rw-r--r--. 1 atlas atlas       620 Apr 19 02:58 runtime_log
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas   2037760 Apr 19 02:58 result.tar.gz
2025-04-19 12:58:31 (8440): Guest Log: -rw-r--r--. 1 atlas atlas     10962 Apr 19 02:58 runtime_log.err
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas       669 Apr 19 02:58 JyPMDm8pCP7nsSi4ap6QjLDmwznN0nGgGQJmkKkKDmssZLDmzbvHqn.diag
2025-04-19 12:58:31 (8440): Guest Log: Looking for outputfile HITS.44075483._037743.pool.root.1
2025-04-19 12:58:31 (8440): Guest Log: HITS file was successfully produced
2025-04-19 12:58:31 (8440): Guest Log: -rw-------. 1 atlas atlas 192189314 Apr 19 02:56 /home/atlas/RunAtlas/HITS.44075483._037743.pool.root.1
2025-04-19 12:58:32 (8440): Guest Log: Successfully finished the ATLAS job!
2025-04-19 12:58:32 (8440): Guest Log: Copying the results back to the shared directory!
2025-04-19 12:58:32 (8440): Guest Log:  *** Contents of shared directory: ***
2025-04-19 12:58:32 (8440): Guest Log: total 221616
2025-04-19 12:58:32 (8440): Guest Log: -rw-rw----. 1 root root 224351343 Apr 18 18:55 ATLAS.root_0
2025-04-19 12:58:32 (8440): Guest Log: -rw-rw-r--. 1 root root      6164 Apr 18 18:56 init_data.xml
2025-04-19 12:58:32 (8440): Guest Log: -rw-rw----. 1 root root    508897 Apr 18 18:55 input.tar.gz
2025-04-19 12:58:32 (8440): Guest Log: -rw-r--r--. 1 root root   2037760 Apr 19  2025 result.tar.gz
2025-04-19 12:58:32 (8440): Guest Log: -rw-rw----. 1 root root     17569 Apr 18 18:56 start_atlas.sh
2025-04-19 12:58:32 (8440): Guest Log:  *** Success! Shutting down the machine. ***
2025-04-19 12:58:32 (8440): VM Completion File Detected.
2025-04-19 12:58:32 (8440): Powering off VM.
2025-04-19 12:58:33 (8440): Successfully stopped VM.
2025-04-19 12:58:33 (8440): Deregistering VM. (boinc_7d05b076755123be, slot#0)
2025-04-19 12:58:34 (8440): Removing network bandwidth throttle group from VM.
2025-04-19 12:58:34 (8440): Removing VM from VirtualBox.
12:58:40 (8440): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN